16-817380-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817380
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817380
    reference: chr 16
allele count: 1
allele frequency: 8.376191513242758e-6
allele num: 119386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1506G>A
  hgvsp: ENST00000566549.1:c.1506G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1506G>A
  hgvsp: ENST00000563941.1:c.1506G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.618G>A
  hgvsp: ENST00000561896.1:c.618G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1506G>A
  hgvsp: ENST00000545450.2:c.1506G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1530G>A
  hgvsp: ENST00000382862.3:c.1530G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.670G>A
  hgvsp: ENST00000566269.2:c.670G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11491
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10387
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3906
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3640
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly510Gly
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/16-817382-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817382
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817382
    reference: chr 16
allele count: 1
allele frequency: 8.373666493610892e-6
allele num: 119422
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.672C>A
  hgvsp: ENSP00000454295.2:p.Ala225Asp
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1508C>A
  hgvsp: ENSP00000442965.2:p.Ala503Asp
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1508C>A
  hgvsp: ENSP00000456702.1:p.Ala503Asp
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.620C>A
  hgvsp: ENSP00000457847.1:p.Ala207Asp
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1508C>A
  hgvsp: ENSP00000456008.1:p.Ala503Asp
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1532C>A
  hgvsp: ENSP00000372313.3:p.Ala511Asp
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5333
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9385
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11493
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16759
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10384
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2667
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala511Asp
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ

16-817384-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817384
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817384
    reference: chr 16
allele count: 2
allele frequency: 1.673752217721688e-5
allele num: 119492
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.674C>T
  hgvsp: ENSP00000454295.2:p.Pro226Ser
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.622C>T
  hgvsp: ENSP00000457847.1:p.Pro208Ser
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1510C>T
  hgvsp: ENSP00000456008.1:p.Pro504Ser
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1534C>T
  hgvsp: ENSP00000372313.3:p.Pro512Ser
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1510C>T
  hgvsp: ENSP00000442965.2:p.Pro504Ser
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1510C>T
  hgvsp: ENSP00000456702.1:p.Pro504Ser
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16768
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11522
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10413
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23923
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1706
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro512Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

16-817386-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817386
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817386
    reference: chr 16
allele count: 1
allele frequency: 8.366240546148183e-6
allele num: 119528
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1512C>G
  hgvsp: ENST00000563941.1:c.1512C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.624C>G
  hgvsp: ENST00000561896.1:c.624C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1512C>G
  hgvsp: ENST00000545450.2:c.1512C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1536C>G
  hgvsp: ENST00000382862.3:c.1536C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.676C>G
  hgvsp: ENST00000566269.2:c.676C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1512C>G
  hgvsp: ENST00000566549.1:c.1512C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11533
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16771
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2672
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10418
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro512Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

16-817388-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817388
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817388
    reference: chr 16
allele count: 18
allele frequency: 1.50536914996822e-4
allele num: 119572
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.678C>T
  hgvsp: ENSP00000454295.2:p.Thr227Met
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1538C>T
  hgvsp: ENSP00000372313.3:p.Thr513Met
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1514C>T
  hgvsp: ENSP00000456008.1:p.Thr505Met
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.626C>T
  hgvsp: ENSP00000457847.1:p.Thr209Met
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1514C>T
  hgvsp: ENSP00000456702.1:p.Thr505Met
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1514C>T
  hgvsp: ENSP00000442965.2:p.Thr505Met
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2033
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 3417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24042
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2671
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1413
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3903
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr513Met
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-817389-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817389
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817389
    reference: chr 16
allele count: 2
allele frequency: 1.672045078335312e-5
allele num: 119614
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.627G>A
  hgvsp: ENST00000561896.1:c.627G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1515G>A
  hgvsp: ENST00000545450.2:c.1515G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1515G>A
  hgvsp: ENST00000563941.1:c.1515G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1539G>A
  hgvsp: ENST00000382862.3:c.1539G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1515G>A
  hgvsp: ENST00000566549.1:c.1515G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.679G>A
  hgvsp: ENST00000566269.2:c.679G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3420
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16780
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10439
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24102
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1708
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1414
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11717
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2671
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr513Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

16-817390-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817390
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817390
    reference: chr 16
allele count: 1
allele frequency: 8.357709987463435e-6
allele num: 119650
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.680G>T
  hgvsp: ENSP00000454295.2:p.Glu228Ter
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1516G>T
  hgvsp: ENSP00000456702.1:p.Glu506Ter
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1516G>T
  hgvsp: ENSP00000456008.1:p.Glu506Ter
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1540G>T
  hgvsp: ENSP00000372313.3:p.Glu514Ter
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1516G>T
  hgvsp: ENSP00000442965.2:p.Glu506Ter
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.628G>T
  hgvsp: ENSP00000457847.1:p.Glu210Ter
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16785
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3420
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24143
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3907
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1708
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu514Ter
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum

16-817392-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817392
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817392
    reference: chr 16
allele count: 9
allele frequency: 7.520053475935829e-5
allele num: 119680
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1542G>A
  hgvsp: ENST00000382862.3:c.1542G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.682G>A
  hgvsp: ENST00000566269.2:c.682G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1518G>A
  hgvsp: ENST00000566549.1:c.1518G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1518G>A
  hgvsp: ENST00000545450.2:c.1518G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.630G>A
  hgvsp: ENST00000561896.1:c.630G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1518G>A
  hgvsp: ENST00000563941.1:c.1518G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16787
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11580
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3420
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9382
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2673
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10457
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24171
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1415
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu514Glu
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff

16-817396-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817396
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817396
    reference: chr 16
allele count: 1
allele frequency: 8.35282325425994e-6
allele num: 119720
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.634T>G
  hgvsp: ENSP00000457847.1:p.Leu212Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1522T>G
  hgvsp: ENSP00000456008.1:p.Leu508Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1546T>G
  hgvsp: ENSP00000372313.3:p.Leu516Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1522T>G
  hgvsp: ENSP00000442965.2:p.Leu508Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1522T>G
  hgvsp: ENSP00000456702.1:p.Leu508Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.686T>G
  hgvsp: ENSP00000454295.2:p.Leu230Val
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11604
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16790
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2674
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10462
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24194
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3655
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu516Val
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

16-817403-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817403
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817403
    reference: chr 16
allele count: 33
allele frequency: 2.755050926698948e-4
allele num: 119780
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1553C>T
  hgvsp: ENSP00000372313.3:p.Ala518Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1529C>T
  hgvsp: ENSP00000456702.1:p.Ala510Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.693C>T
  hgvsp: ENSP00000454295.2:p.Ala232Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.641C>T
  hgvsp: ENSP00000457847.1:p.Ala214Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1529C>T
  hgvsp: ENSP00000456008.1:p.Ala510Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1529C>T
  hgvsp: ENSP00000442965.2:p.Ala510Val
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 9.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2884
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10465
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24262
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala518Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

16-817404-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817404
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817404
    reference: chr 16
allele count: 2
allele frequency: 1.669532697797886e-5
allele num: 119794
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.642G>A
  hgvsp: ENST00000561896.1:c.642G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1554G>A
  hgvsp: ENST00000382862.3:c.1554G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.694G>A
  hgvsp: ENST00000566269.2:c.694G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1530G>A
  hgvsp: ENST00000566549.1:c.1530G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1530G>A
  hgvsp: ENST00000563941.1:c.1530G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1530G>A
  hgvsp: ENST00000545450.2:c.1530G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16810
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9393
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1712
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2675
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3662
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala518Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

16-817406-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817406
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817406
    reference: chr 16
allele count: 2
allele frequency: 1.669421211665915e-5
allele num: 119802
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1532T>C
  hgvsp: ENSP00000442965.2:p.Leu511Pro
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1532T>C
  hgvsp: ENSP00000456702.1:p.Leu511Pro
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.644T>C
  hgvsp: ENSP00000457847.1:p.Leu215Pro
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.696T>C
  hgvsp: ENSP00000454295.2:p.Leu233Pro
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1532T>C
  hgvsp: ENSP00000456008.1:p.Leu511Pro
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1556T>C
  hgvsp: ENSP00000372313.3:p.Leu519Pro
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9394
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10474
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24297
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu519Pro
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

16-817407-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817407
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817407
    reference: chr 16
allele count: 5094
allele frequency: 4.25151899579355e-2
allele num: 119816
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1533C>T
  hgvsp: ENST00000563941.1:c.1533C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1557C>T
  hgvsp: ENST00000382862.3:c.1557C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.697C>T
  hgvsp: ENST00000566269.2:c.697C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1533C>T
  hgvsp: ENST00000566549.1:c.1533C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.645C>T
  hgvsp: ENST00000561896.1:c.645C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1533C>T
  hgvsp: ENST00000545450.2:c.1533C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 4.75e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 6.25e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 5.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 5170
  bin: 4.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 11351
  bin: 2.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.75e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 8.75e1
  variant carriers: 99
genotype depth: GenotypeDepth
  all individuals: 9210
  bin: 3.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.25e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 5.25e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 6.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 16622
  bin: 3.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 4680
  bin: 9.75e1
  variant carriers: 3873
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3574
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 10320
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12689
  bin: 9.75e1
  variant carriers: 4758
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23906
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu519Leu
num of homozygotes: 326
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ

16-817408-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817408
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817408
    reference: chr 16
allele count: 1
allele frequency: 8.345852111500584e-6
allele num: 119820
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.698A>G
  hgvsp: ENSP00000454295.2:p.Ser234Gly
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1558A>G
  hgvsp: ENSP00000372313.3:p.Ser520Gly
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.646A>G
  hgvsp: ENSP00000457847.1:p.Ser216Gly
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1534A>G
  hgvsp: ENSP00000442965.2:p.Ser512Gly
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1534A>G
  hgvsp: ENSP00000456702.1:p.Ser512Gly
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1534A>G
  hgvsp: ENSP00000456008.1:p.Ser512Gly
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9933
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8813
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11179
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1485
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser520Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

16-817413-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817413
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817413
    reference: chr 16
allele count: 1
allele frequency: 8.345155637152633e-6
allele num: 119830
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.651G>A
  hgvsp: ENST00000561896.1:c.651G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1563G>A
  hgvsp: ENST00000382862.3:c.1563G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.703G>A
  hgvsp: ENST00000566269.2:c.703G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1539G>A
  hgvsp: ENST00000563941.1:c.1539G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1539G>A
  hgvsp: ENST00000566549.1:c.1539G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1539G>A
  hgvsp: ENST00000545450.2:c.1539G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12005
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2886
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4174
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11178
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1486
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8813
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Gln521Gln
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

16-817414-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817414
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817414
    reference: chr 16
allele count: 1
allele frequency: 8.345155637152633e-6
allele num: 119830
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1540C>T
  hgvsp: ENSP00000456008.1:p.Gln514Ter
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1540C>T
  hgvsp: ENSP00000442965.2:p.Gln514Ter
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.652C>T
  hgvsp: ENSP00000457847.1:p.Gln218Ter
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.704C>T
  hgvsp: ENSP00000454295.2:p.Gln236Ter
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1540C>T
  hgvsp: ENSP00000456702.1:p.Gln514Ter
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1564C>T
  hgvsp: ENSP00000372313.3:p.Gln522Ter
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12008
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9935
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11179
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2886
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25610
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln522Ter
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

16-817421-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817421
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817421
    reference: chr 16
allele count: 1
allele frequency: 8.343763037129745e-6
allele num: 119850
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1547T>G
  hgvsp: ENSP00000456008.1:p.Val516Gly
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.659T>G
  hgvsp: ENSP00000457847.1:p.Val220Gly
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.711T>G
  hgvsp: ENSP00000454295.2:p.Val238Gly
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1571T>G
  hgvsp: ENSP00000372313.3:p.Val524Gly
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1547T>G
  hgvsp: ENSP00000442965.2:p.Val516Gly
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1547T>G
  hgvsp: ENSP00000456702.1:p.Val516Gly
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12009
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8811
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25616
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4172
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val524Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

16-817425-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817425
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817425
    reference: chr 16
allele count: 1
allele frequency: 8.343902276216541e-6
allele num: 119848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.715C>T
  hgvsp: ENST00000566269.2:c.715C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1551C>T
  hgvsp: ENST00000566549.1:c.1551C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1575C>T
  hgvsp: ENST00000382862.3:c.1575C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.663C>T
  hgvsp: ENST00000561896.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1551C>T
  hgvsp: ENST00000545450.2:c.1551C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1551C>T
  hgvsp: ENST00000563941.1:c.1551C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5692
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12012
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4172
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8809
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25618
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser525Ser
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-817426-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817426
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817426
    reference: chr 16
allele count: 1
allele frequency: 8.343902276216541e-6
allele num: 119848
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1576A>G
  hgvsp: ENSP00000372313.3:p.Met526Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.664A>G
  hgvsp: ENSP00000457847.1:p.Met222Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1552A>G
  hgvsp: ENSP00000442965.2:p.Met518Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1552A>G
  hgvsp: ENSP00000456702.1:p.Met518Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.716A>G
  hgvsp: ENSP00000454295.2:p.Met240Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1552A>G
  hgvsp: ENSP00000456008.1:p.Met518Val
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12012
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2703
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17588
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3917
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4172
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8808
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25625
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1486
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Met526Val
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

16-817427-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817427
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817427
    reference: chr 16
allele count: 1
allele frequency: 8.343902276216541e-6
allele num: 119848
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.717T>C
  hgvsp: ENSP00000454295.2:p.Met240Thr
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1553T>C
  hgvsp: ENSP00000456702.1:p.Met518Thr
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1577T>C
  hgvsp: ENSP00000372313.3:p.Met526Thr
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.665T>C
  hgvsp: ENSP00000457847.1:p.Met222Thr
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1553T>C
  hgvsp: ENSP00000442965.2:p.Met518Thr
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1553T>C
  hgvsp: ENSP00000456008.1:p.Met518Thr
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3917
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25625
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4171
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1486
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11185
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Met526Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

16-817433-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817433
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817433
    reference: chr 16
allele count: 1
allele frequency: 8.343902276216541e-6
allele num: 119848
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1559T>C
  hgvsp: ENSP00000456702.1:p.Leu520Ser
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1583T>C
  hgvsp: ENSP00000372313.3:p.Leu528Ser
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.723T>C
  hgvsp: ENSP00000454295.2:p.Leu242Ser
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1559T>C
  hgvsp: ENSP00000456008.1:p.Leu520Ser
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.671T>C
  hgvsp: ENSP00000457847.1:p.Leu224Ser
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1559T>C
  hgvsp: ENSP00000442965.2:p.Leu520Ser
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5692
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11185
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25619
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu528Ser
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD

16-817437-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817437
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817437
    reference: chr 16
allele count: 1
allele frequency: 8.343484572897024e-6
allele num: 119854
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.727C>T
  hgvsp: ENST00000566269.2:c.727C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1587C>T
  hgvsp: ENST00000382862.3:c.1587C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1563C>T
  hgvsp: ENST00000563941.1:c.1563C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.675C>T
  hgvsp: ENST00000561896.1:c.675C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1563C>T
  hgvsp: ENST00000545450.2:c.1563C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1563C>T
  hgvsp: ENST00000566549.1:c.1563C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12022
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5692
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4171
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11186
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala529Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff

16-817438-ACG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817438
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817436
    reference: chr 16
allele count: 1
allele frequency: 8.343902276216541e-6
allele num: 119848
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.729_730delCG
  hgvsp: ENSP00000454295.2:p.Thr244IlefsTer16
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.677_678delCG
  hgvsp: ENSP00000457847.1:p.Thr226IlefsTer16
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1565_1566delCG
  hgvsp: ENSP00000456702.1:p.Thr522IlefsTer16
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1589_1590delCG
  hgvsp: ENSP00000372313.3:p.Thr530IlefsTer16
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1565_1566delCG
  hgvsp: ENSP00000456008.1:p.Thr522IlefsTer16
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1565_1566delCG
  hgvsp: ENSP00000442965.2:p.Thr522IlefsTer16
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17594
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5691
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4172
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3916
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11185
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr530IlefsTer16
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: ACG
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

16-817439-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817439
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817439
    reference: chr 16
allele count: 1
allele frequency: 8.344041519950603e-6
allele num: 119846
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1565C>G
  hgvsp: ENSP00000456702.1:p.Thr522Arg
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.677C>G
  hgvsp: ENSP00000457847.1:p.Thr226Arg
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.729C>G
  hgvsp: ENSP00000454295.2:p.Thr244Arg
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1589C>G
  hgvsp: ENSP00000372313.3:p.Thr530Arg
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1565C>G
  hgvsp: ENSP00000456008.1:p.Thr522Arg
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1565C>G
  hgvsp: ENSP00000442965.2:p.Thr522Arg
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5691
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17594
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3915
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8807
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr530Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD

16-817439-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817439
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817439
    reference: chr 16
allele count: 25
allele frequency: 2.086010379987651e-4
allele num: 119846
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1565C>T
  hgvsp: ENSP00000456008.1:p.Thr522Met
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1589C>T
  hgvsp: ENSP00000372313.3:p.Thr530Met
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.729C>T
  hgvsp: ENSP00000454295.2:p.Thr244Met
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.677C>T
  hgvsp: ENSP00000457847.1:p.Thr226Met
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1565C>T
  hgvsp: ENSP00000456702.1:p.Thr522Met
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1565C>T
  hgvsp: ENSP00000442965.2:p.Thr522Met
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5691
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 9.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17594
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25606
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2886
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr530Met
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

16-817440-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817440
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817440
    reference: chr 16
allele count: 1
allele frequency: 8.344041519950603e-6
allele num: 119846
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1566G>A
  hgvsp: ENST00000566549.1:c.1566G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1566G>A
  hgvsp: ENST00000563941.1:c.1566G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1590G>A
  hgvsp: ENST00000382862.3:c.1590G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.730G>A
  hgvsp: ENST00000566269.2:c.730G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.678G>A
  hgvsp: ENST00000561896.1:c.678G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1566G>A
  hgvsp: ENST00000545450.2:c.1566G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9938
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12023
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25612
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2888
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3917
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr530Thr
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

16-817441-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817441
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817441
    reference: chr 16
allele count: 1
allele frequency: 8.344041519950603e-6
allele num: 119846
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.731T>C
  hgvsp: ENSP00000454295.2:p.Phe245Leu
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1591T>C
  hgvsp: ENSP00000372313.3:p.Phe531Leu
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1567T>C
  hgvsp: ENSP00000456702.1:p.Phe523Leu
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1567T>C
  hgvsp: ENSP00000456008.1:p.Phe523Leu
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1567T>C
  hgvsp: ENSP00000442965.2:p.Phe523Leu
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.679T>C
  hgvsp: ENSP00000457847.1:p.Phe227Leu
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9938
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12024
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2889
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3918
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11190
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Phe531Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

16-817441-T-TTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817441
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817443
    reference: chr 16
allele count: 1
allele frequency: 8.344041519950603e-6
allele num: 119846
alternate allele: TTG
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.680_681insGT
  hgvsp: ENSP00000457847.1:p.Phe227LeufsTer3
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1568_1569insGT
  hgvsp: ENSP00000456008.1:p.Phe523LeufsTer3
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1568_1569insGT
  hgvsp: ENSP00000456702.1:p.Phe523LeufsTer3
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1592_1593insGT
  hgvsp: ENSP00000372313.3:p.Phe531LeufsTer3
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1568_1569insGT
  hgvsp: ENSP00000442965.2:p.Phe523LeufsTer3
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.732_733insGT
  hgvsp: ENSP00000454295.2:p.Phe245LeufsTer3
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12024
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9938
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11190
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3918
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25601
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Phe531LeufsTer3
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

16-817443-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817443
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817443
    reference: chr 16
allele count: 1
allele frequency: 8.344180768332166e-6
allele num: 119844
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1569C>G
  hgvsp: ENSP00000442965.2:p.Phe523Leu
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1593C>G
  hgvsp: ENSP00000372313.3:p.Phe531Leu
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1569C>G
  hgvsp: ENSP00000456008.1:p.Phe523Leu
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.733C>G
  hgvsp: ENSP00000454295.2:p.Phe245Leu
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.681C>G
  hgvsp: ENSP00000457847.1:p.Phe227Leu
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1569C>G
  hgvsp: ENSP00000456702.1:p.Phe523Leu
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12024
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17600
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4171
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8788
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Phe531Leu
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

16-817444-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817444
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817444
    reference: chr 16
allele count: 1
allele frequency: 8.344180768332166e-6
allele num: 119844
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1570A>G
  hgvsp: ENSP00000456702.1:p.Met524Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.682A>G
  hgvsp: ENSP00000457847.1:p.Met228Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.734A>G
  hgvsp: ENSP00000454295.2:p.Met246Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1570A>G
  hgvsp: ENSP00000456008.1:p.Met524Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1570A>G
  hgvsp: ENSP00000442965.2:p.Met524Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1594A>G
  hgvsp: ENSP00000372313.3:p.Met532Val
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17601
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3918
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25602
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Met532Val
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

16-817445-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817445
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817445
    reference: chr 16
allele count: 4
allele frequency: 3.337672307332866e-5
allele num: 119844
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1571T>C
  hgvsp: ENSP00000456008.1:p.Met524Thr
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.683T>C
  hgvsp: ENSP00000457847.1:p.Met228Thr
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1595T>C
  hgvsp: ENSP00000372313.3:p.Met532Thr
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1571T>C
  hgvsp: ENSP00000456702.1:p.Met524Thr
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.735T>C
  hgvsp: ENSP00000454295.2:p.Met246Thr
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1571T>C
  hgvsp: ENSP00000442965.2:p.Met524Thr
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3684
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3918
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11191
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1813
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8787
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Met532Thr
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

16-817449-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817449
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817449
    reference: chr 16
allele count: 4
allele frequency: 3.338006542492823e-5
allele num: 119832
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.739G>C
  hgvsp: ENSP00000454295.2:p.Lys247Asn
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1599G>C
  hgvsp: ENSP00000372313.3:p.Lys533Asn
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1575G>C
  hgvsp: ENSP00000456702.1:p.Lys525Asn
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1575G>C
  hgvsp: ENSP00000442965.2:p.Lys525Asn
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1575G>C
  hgvsp: ENSP00000456008.1:p.Lys525Asn
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.687G>C
  hgvsp: ENSP00000457847.1:p.Lys229Asn
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3684
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9942
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12020
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11192
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4171
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25573
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Lys533Asn
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

16-817453-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817453
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817453
    reference: chr 16
allele count: 7
allele frequency: 5.843266887041303e-5
allele num: 119796
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1603C>T
  hgvsp: ENSP00000372313.3:p.Arg535Trp
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.691C>T
  hgvsp: ENSP00000457847.1:p.Arg231Trp
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.743C>T
  hgvsp: ENSP00000454295.2:p.Arg249Trp
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1579C>T
  hgvsp: ENSP00000456008.1:p.Arg527Trp
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1579C>T
  hgvsp: ENSP00000442965.2:p.Arg527Trp
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1579C>T
  hgvsp: ENSP00000456702.1:p.Arg527Trp
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9944
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3684
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17598
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4167
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11169
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg535Trp
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP

16-817454-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817454
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817454
    reference: chr 16
allele count: 2
allele frequency: 1.669532697797886e-5
allele num: 119794
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.744G>A
  hgvsp: ENSP00000454295.2:p.Arg249Gln
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1580G>A
  hgvsp: ENSP00000456702.1:p.Arg527Gln
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1604G>A
  hgvsp: ENSP00000372313.3:p.Arg535Gln
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1580G>A
  hgvsp: ENSP00000442965.2:p.Arg527Gln
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.692G>A
  hgvsp: ENSP00000457847.1:p.Arg231Gln
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1580G>A
  hgvsp: ENSP00000456008.1:p.Arg527Gln
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9941
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12020
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25532
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11171
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4167
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3907
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg535Gln
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

16-817454-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817454
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817454
    reference: chr 16
allele count: 2
allele frequency: 1.669532697797886e-5
allele num: 119794
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.692G>C
  hgvsp: ENSP00000457847.1:p.Arg231Pro
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1580G>C
  hgvsp: ENSP00000442965.2:p.Arg527Pro
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.744G>C
  hgvsp: ENSP00000454295.2:p.Arg249Pro
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1580G>C
  hgvsp: ENSP00000456008.1:p.Arg527Pro
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1604G>C
  hgvsp: ENSP00000372313.3:p.Arg535Pro
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1580G>C
  hgvsp: ENSP00000456702.1:p.Arg527Pro
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12020
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9941
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2891
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25532
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11171
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3907
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4167
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg535Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-817457-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817457
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817457
    reference: chr 16
allele count: 1
allele frequency: 8.347663488989432e-6
allele num: 119794
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1583C>A
  hgvsp: ENSP00000456702.1:p.Thr528Lys
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1607C>A
  hgvsp: ENSP00000372313.3:p.Thr536Lys
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1583C>A
  hgvsp: ENSP00000442965.2:p.Thr528Lys
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.695C>A
  hgvsp: ENSP00000457847.1:p.Thr232Lys
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1583C>A
  hgvsp: ENSP00000456008.1:p.Thr528Lys
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.747C>A
  hgvsp: ENSP00000454295.2:p.Thr250Lys
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2891
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4167
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr536Lys
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff

16-817457-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817457
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817457
    reference: chr 16
allele count: 6
allele frequency: 5.008598093393659e-5
allele num: 119794
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1583C>G
  hgvsp: ENSP00000442965.2:p.Thr528Arg
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.747C>G
  hgvsp: ENSP00000454295.2:p.Thr250Arg
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.695C>G
  hgvsp: ENSP00000457847.1:p.Thr232Arg
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1583C>G
  hgvsp: ENSP00000456008.1:p.Thr528Arg
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1583C>G
  hgvsp: ENSP00000456702.1:p.Thr528Arg
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1607C>G
  hgvsp: ENSP00000372313.3:p.Thr536Arg
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4167
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11170
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1813
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3906
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr536Arg
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

16-817457-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817457
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817457
    reference: chr 16
allele count: 14
allele frequency: 1.16867288845852e-4
allele num: 119794
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.747C>T
  hgvsp: ENSP00000454295.2:p.Thr250Met
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1583C>T
  hgvsp: ENSP00000456008.1:p.Thr528Met
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1607C>T
  hgvsp: ENSP00000372313.3:p.Thr536Met
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1583C>T
  hgvsp: ENSP00000442965.2:p.Thr528Met
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.695C>T
  hgvsp: ENSP00000457847.1:p.Thr232Met
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1583C>T
  hgvsp: ENSP00000456702.1:p.Thr528Met
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 12015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25527
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2891
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8771
  bin: 9.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr536Met
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

16-817458-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817458
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817458
    reference: chr 16
allele count: 29
allele frequency: 2.42094366714529e-4
allele num: 119788
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1584G>A
  hgvsp: ENST00000545450.2:c.1584G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1584G>A
  hgvsp: ENST00000563941.1:c.1584G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.748G>A
  hgvsp: ENST00000566269.2:c.748G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.696G>A
  hgvsp: ENST00000561896.1:c.696G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1584G>A
  hgvsp: ENST00000566549.1:c.1584G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1608G>A
  hgvsp: ENST00000382862.3:c.1608G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12017
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9947
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5692
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2582
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 9.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1485
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1814
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25531
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4167
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr536Thr
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

16-817463-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817463
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817463
    reference: chr 16
allele count: 40
allele frequency: 3.339622956568204e-4
allele num: 119774
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1613C>T
  hgvsp: ENSP00000372313.3:p.Ala538Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.753C>T
  hgvsp: ENSP00000454295.2:p.Ala252Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1589C>T
  hgvsp: ENSP00000442965.2:p.Ala530Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1589C>T
  hgvsp: ENSP00000456702.1:p.Ala530Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1589C>T
  hgvsp: ENSP00000456008.1:p.Ala530Val
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.701C>T
  hgvsp: ENSP00000457847.1:p.Ala234Val
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9944
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12003
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5696
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17606
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2236
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2562
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 9.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1814
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25513
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala538Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

16-817464-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817464
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817464
    reference: chr 16
allele count: 1
allele frequency: 8.348778573694668e-6
allele num: 119778
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.754G>A
  hgvsp: ENST00000566269.2:c.754G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1590G>A
  hgvsp: ENST00000545450.2:c.1590G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.702G>A
  hgvsp: ENST00000561896.1:c.702G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1590G>A
  hgvsp: ENST00000566549.1:c.1590G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1614G>A
  hgvsp: ENST00000382862.3:c.1614G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1590G>A
  hgvsp: ENST00000563941.1:c.1590G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9951
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17613
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12012
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5702
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2888
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11178
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8698
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala538Ala
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

16-817467-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817467
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817467
    reference: chr 16
allele count: 2
allele frequency: 1.670174032134148e-5
allele num: 119748
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1593G>C
  hgvsp: ENST00000563941.1:c.1593G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1617G>C
  hgvsp: ENST00000382862.3:c.1617G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.757G>C
  hgvsp: ENST00000566269.2:c.757G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.705G>C
  hgvsp: ENST00000561896.1:c.705G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1593G>C
  hgvsp: ENST00000545450.2:c.1593G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1593G>C
  hgvsp: ENST00000566549.1:c.1593G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5701
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9949
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17606
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1814
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3906
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2888
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4175
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Val539Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

16-817470-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817470
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817470
    reference: chr 16
allele count: 1
allele frequency: 8.353660574063554e-6
allele num: 119708
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1620G>A
  hgvsp: ENST00000382862.3:c.1620G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1596G>A
  hgvsp: ENST00000566549.1:c.1596G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.760G>A
  hgvsp: ENST00000566269.2:c.760G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1596G>A
  hgvsp: ENST00000545450.2:c.1596G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.708G>A
  hgvsp: ENST00000561896.1:c.708G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1596G>A
  hgvsp: ENST00000563941.1:c.1596G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2473
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9951
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5702
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8697
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1813
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25379
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4174
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11152
  bin: 6.75e1
  variant carriers: 0
hgvs: c.1620G>A
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

16-817474-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817474
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817474
    reference: chr 16
allele count: 5
allele frequency: 4.179483750167179e-5
allele num: 119632
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1596+4T>C
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.760+4T>C
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1620+4T>C
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.708+4T>C
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1596+4T>C
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1596+4T>C
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 2432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17581
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5707
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11124
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1810
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25265
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1475
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3897
  bin: 7.25e1
  variant carriers: 0
hgvs: c.1620+4T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

16-817474-TGGCGAGCGGGAGGAGGGGCGTGTGGAGGAGGGGCCCGTGGAGGAGG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817474
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817428
    reference: chr 16
allele count: 42
allele frequency: 3.510766350140431e-4
allele num: 119632
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 2432
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 17581
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 11921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5707
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9948
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3897
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8685
  bin: 9.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4170
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 1
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: TGGCGAGCGGGAGGAGGGGCGTGTGGAGGAGGGGCCCGTGGAGGAGG
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

16-817475-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817475
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817475
    reference: chr 16
allele count: 2
allele frequency: 1.672772285508774e-5
allele num: 119562
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.708+5G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1596+5G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1620+5G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1596+5G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.760+5G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1596+5G>A
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9938
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3675
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5705
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11911
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17587
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8654
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11133
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4176
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1813
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1620+5G>A
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

16-817477-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817477
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817477
    reference: chr 16
allele count: 9
allele frequency: 7.530750564806292e-5
allele num: 119510
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1620+7C>T
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1596+7C>T
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1596+7C>T
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1596+7C>T
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.760+7C>T
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.708+7C>T
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5700
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11894
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17566
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2879
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11120
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1806
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3890
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1475
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.25e1
  variant carriers: 0
hgvs: c.1620+7C>T
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

16-817478-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817478
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817478
    reference: chr 16
allele count: 2
allele frequency: 1.673584147810952e-5
allele num: 119504
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.760+8G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1596+8G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1596+8G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.708+8G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1620+8G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1596+8G>A
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5701
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11881
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9933
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17557
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25091
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
hgvs: c.1620+8G>A
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS

16-817479-AGCGGGAGGAGGGGC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817479
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817465
    reference: chr 16
allele count: 1
allele frequency: 8.373666493610892e-6
allele num: 119422
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9938
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5701
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3886
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8609
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25099
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4154
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2875
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1803
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: AGCGGGAGGAGGGGC
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

16-817481-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817481
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817481
    reference: chr 16
allele count: 2464
allele frequency: 2.063547895415641e-2
allele num: 119406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.708+11C>T
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1596+11C>T
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1620+11C>T
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.760+11C>T
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1596+11C>T
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1596+11C>T
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 4.75e1
  variant carriers: 117
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5700
  bin: 4.25e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 177
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 7.25e1
  variant carriers: 213
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 2.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 17503
  bin: 3.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 7.75e1
  variant carriers: 176
genotype depth: GenotypeDepth
  all individuals: 9933
  bin: 3.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 9.75e1
  variant carriers: 536
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 5.25e1
  variant carriers: 147
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 6.75e1
  variant carriers: 171
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 8.75e1
  variant carriers: 142
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 6.25e1
  variant carriers: 200
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 131
genotype depth: GenotypeDepth
  all individuals: 11813
  bin: 2.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 5.75e1
  variant carriers: 172
genotype quality: GenotypeQuality
  all individuals: 2832
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1448
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4123
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8975
  bin: 9.75e1
  variant carriers: 2420
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 1
num of homozygotes: 32
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD

16-817481-CGGGAGGAGGGGCGTGTGGAGGAGGGGCCCGTGGAGGAGGGGCGAGT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817481
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817435
    reference: chr 16
allele count: 27
allele frequency: 2.261192904879152e-4
allele num: 119406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17503
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11813
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9933
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5700
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11033
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1448
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3863
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1762
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: CGGGAGGAGGGGCGTGTGGAGGAGGGGCCCGTGGAGGAGGGGCGAGT
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/16-817481-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817481
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817481
    reference: chr 16
allele count: 5
allele frequency: 4.187394268294726e-5
allele num: 119406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.708+11C>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1596+11C>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1596+11C>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.760+11C>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1620+11C>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1596+11C>A
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9933
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5700
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2832
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4123
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1448
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24987
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD

16-817482-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817482
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817482
    reference: chr 16
allele count: 4
allele frequency: 3.353229159680773e-5
allele num: 119288
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.760+12G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1596+12G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1596+12G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1596+12G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1620+12G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.708+12G>A
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 18198
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5844
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26051
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11513
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2918
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4267
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

16-817482-G-GGGAGGAGGGGCGCGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817482
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817497
    reference: chr 16
allele count: 2
allele frequency: 1.676614579840386e-5
allele num: 119288
alternate allele: GGGAGGAGGGGCGCGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5844
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18198
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11513
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3978
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6680
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1496
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

16-817482-G-GGGAGGAGGGGCGTGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817482
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817497
    reference: chr 16
allele count: 1
allele frequency: 8.383072899201931e-6
allele num: 119288
alternate allele: GGGAGGAGGGGCGTGT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18198
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10319
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5844
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2918
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3978
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11513
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6680
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26051
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

16-817482-GGGAGGAGGGGCGTGT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817482
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817467
    reference: chr 16
allele count: 4
allele frequency: 3.353229159680773e-5
allele num: 119288
alternate allele: G
canonical: false
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18198
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5844
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2918
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3978
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1496
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26051
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6680
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 11513
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4267
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8542
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6578
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 878
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.534683855125844e-5
  allele num: 65160
  num of homozygotes: 0
population: Latino
population: African
population: South Asian
reference allele: GGGAGGAGGGGCGTGT
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

16-817482-GGGAGGAGGGGCGTGTGGAGGAGGGGCCCGT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817482
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817452
    reference: chr 16
allele count: 9
allele frequency: 7.544765609281739e-5
allele num: 119288
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5844
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18198
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10319
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3978
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6680
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11513
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26051
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1496
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: GGGAGGAGGGGCGTGTGGAGGAGGGGCCCGT
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

16-817482-GGGAGGAGGGGCGTGTGGAGGAGGGGCCCGTGGAGGAGGGGCGAGTGGGAGGAGGGGCGCGTGGAGGGGGGGCGTGTGGGGGGGTGCGT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817482
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817394
    reference: chr 16
allele count: 2
allele frequency: 1.676614579840386e-5
allele num: 119288
alternate allele: G
canonical: false
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 5844
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18198
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6680
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11513
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3978
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26051
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2918
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1496
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4267
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6578
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 878
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10130
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 16476
  num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: GGGAGGAGGGGCGTGTGGAGGAGGGGCCCGTGGAGGAGGGGCGAGTGGGAGGAGGGGCGCGTGGAGGGGGGGCGTGTGGGGGGGTGCGT
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

16-817484-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817484
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817484
    reference: chr 16
allele count: 206
allele frequency: 1.727231566414569e-3
allele num: 119266
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1596+14G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.708+14G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1620+14G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1596+14G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1596+14G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.760+14G>A
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 18155
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 5.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3697
  bin: 4.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 10315
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 6.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 5841
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 5.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 9.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 12307
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25962
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2921
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3985
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1498
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff

16-817486-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817486
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817486
    reference: chr 16
allele count: 1
allele frequency: 8.386166180269028e-6
allele num: 119244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.760+16G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1620+16G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1596+16G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.708+16G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1596+16G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1596+16G>A
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5848
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12306
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18199
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3695
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1499
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11540
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1817
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25947
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
reference allele: G
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

16-817487-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817487
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817487
    reference: chr 16
allele count: 1
allele frequency: 8.384759860477596e-6
allele num: 119264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.760+17G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.708+17G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1620+17G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1596+17G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1596+17G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1596+17G>A
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2268
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5850
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4270
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6637
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25934
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1497
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3976
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2932
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: QD

16-817488-AGGGGCGTGTGGAGGAGGGGCCCGTGGAGGAGGGGCGAGTGGGAGGAGGGGCGCGTGGAGGG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817488
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817427
    reference: chr 16
allele count: 17
allele frequency: 1.427156265216004e-4
allele num: 119118
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10330
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3689
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12283
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18160
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5844
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2908
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11514
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25841
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: AGGGGCGTGTGGAGGAGGGGCCCGTGGAGGAGGGGCGAGTGGGAGGAGGGGCGCGTGGAGGG
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-817490-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817490
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817490
    reference: chr 16
allele count: 1
allele frequency: 8.395036854211791e-6
allele num: 119118
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1596+20G>T
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1596+20G>T
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.708+20G>T
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1620+20G>T
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.760+20G>T
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1596+20G>T
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18079
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3673
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12245
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4259
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6570
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25763
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3962
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/16-817493-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817493
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817493
    reference: chr 16
allele count: 1
allele frequency: 8.414250374434141e-6
allele num: 118846
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1596+23C>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1620+23C>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.760+23C>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1596+23C>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1596+23C>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.708+23C>A
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12177
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2784
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3875
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1141
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4147
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6853
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

16-817493-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817493
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817493
    reference: chr 16
allele count: 1888
allele frequency: 1.588610470693166e-2
allele num: 118846
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1596+23C>T
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1620+23C>T
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1596+23C>T
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1596+23C>T
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.760+23C>T
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.708+23C>T
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12177
  bin: 2.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 4.75e1
  variant carriers: 257
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 6.75e1
  variant carriers: 122
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 5.75e1
  variant carriers: 216
genotype depth: GenotypeDepth
  all individuals: 10285
  bin: 3.75e1
  variant carriers: 143
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 17942
  bin: 3.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.25e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 6.25e1
  variant carriers: 181
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 5.25e1
  variant carriers: 229
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 9.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 5828
  bin: 4.25e1
  variant carriers: 218
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 2.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4147
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1141
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6853
  bin: 9.75e1
  variant carriers: 1760
num of homozygotes: 97
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

16-817493-CGTGTGGAGGAGGGGCCCGTGGAGGAGGGGCGAGTGGGAGGAGGGGCGCGTGGAGGGGGGGCGTGTGGGGGGGT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817493
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817420
    reference: chr 16
allele count: 3
allele frequency: 2.524275112330242e-5
allele num: 118846
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10285
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12177
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2784
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3875
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25307
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11264
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4147
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
reference allele: CGTGTGGAGGAGGGGCCCGTGGAGGAGGGGCGAGTGGGAGGAGGGGCGCGTGGAGGGGGGGCGTGTGGGGGGGT
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

16-817494-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817494
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817494
    reference: chr 16
allele count: 3
allele frequency: 2.525210013299439e-5
allele num: 118802
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1596+24G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.708+24G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.760+24G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1596+24G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1620+24G>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1596+24G>A
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12425
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18395
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5706
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10426
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3959
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1466
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2849
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

16-817494-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817494
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817494
    reference: chr 16
allele count: 10
allele frequency: 8.417366710998132e-5
allele num: 118802
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1596+24G>C
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.708+24G>C
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1596+24G>C
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1596+24G>C
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1620+24G>C
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.760+24G>C
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5706
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12425
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18395
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10426
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4251
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11529
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1369
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5208
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 25846
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD

16-817494-GTGTGGAGGAGGGGCC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817494
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817479
    reference: chr 16
allele count: 3
allele frequency: 2.525210013299439e-5
allele num: 118802
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18395
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5706
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10426
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12425
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3959
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25846
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11529
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2849
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1369
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: GTGTGGAGGAGGGGCC
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD

16-817495-TGTGGAGGAGGGGCCC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817495
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817480
    reference: chr 16
allele count: 27
allele frequency: 2.294240606359295e-4
allele num: 117686
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3514
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10422
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12436
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18383
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25615
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4103
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11324
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3827
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1632
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2715
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1420
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: TGTGGAGGAGGGGCCC
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD

16-817495-TGTGGAGGAGGGGCCCGTGGAGGAGGGGCGAGTGGGAGGAGGGGCGC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817495
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817449
    reference: chr 16
allele count: 65
allele frequency: 5.523171830124229e-4
allele num: 117686
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3514
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 2.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10422
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12436
  bin: 2.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 18383
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1632
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4847
  bin: 9.75e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11324
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1420
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 2.5e0
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
reference allele: TGTGGAGGAGGGGCCCGTGGAGGAGGGGCGAGTGGGAGGAGGGGCGC
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

16-817495-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817495
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817495
    reference: chr 16
allele count: 1
allele frequency: 8.497187430960352e-6
allele num: 117686
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1596+25T>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1596+25T>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.760+25T>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1596+25T>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.708+25T>A
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1620+25T>A
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3514
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18383
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2715
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1632
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4847
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4103
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

16-817495-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 817495
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 817495
    reference: chr 16
allele count: 18
allele frequency: 1.529493737572863e-4
allele num: 117686
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456702
  ensembl transcript: ENST00000566549
  gene symbol: MSLN
  hgvsc: ENST00000566549.1:c.1596+25T>C
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000454295
  ensembl transcript: ENST00000566269
  gene symbol: MSLN
  hgvsc: ENST00000566269.2:c.760+25T>C
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000457847
  ensembl transcript: ENST00000561896
  gene symbol: MSLN
  hgvsc: ENST00000561896.1:c.708+25T>C
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000456008
  ensembl transcript: ENST00000563941
  gene symbol: MSLN
  hgvsc: ENST00000563941.1:c.1596+25T>C
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000442965
  ensembl transcript: ENST00000545450
  gene symbol: MSLN
  hgvsc: ENST00000545450.2:c.1596+25T>C
  variant of: http://identifiers.org/hgnc/7371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102854
  ensembl protein: ENSP00000372313
  ensembl transcript: ENST00000382862
  gene symbol: MSLN
  hgvsc: ENST00000382862.3:c.1620+25T>C
  variant of: http://identifiers.org/hgnc/7371
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 10422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3514
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18383
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12436
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4103
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25615
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1420
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1632
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3827
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 11724
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1704
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23787
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2667
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10046
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65170
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.744e0

FS
type: SiteQuality
SIO_000300: 1.894e0

MQRankSum
type: SiteQuality
SIO_000300: 6.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.56e-1

MQ
type: SiteQuality
SIO_000300: 5.926e1

DP
type: SiteQuality
SIO_000300: 2.428556e6

QD
type: SiteQuality
SIO_000300: 1.184e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.45e-1

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3641
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23829
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1411
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3899
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11720
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1704
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10068
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533977603926983e-5
allele num: 65190
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

FS
type: SiteQuality
SIO_000300: 6.985e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.439e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

DP
type: SiteQuality
SIO_000300: 2.429458e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

QD
type: SiteQuality
SIO_000300: 1.21e1

VQSLOD
type: SiteQuality
SIO_000300: 1.73e-1

MQ
type: SiteQuality
SIO_000300: 5.929e1

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2671
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11723
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3651
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3903
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1412
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21197430614471e-4
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65226
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10098
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.23e-1

FS
type: SiteQuality
SIO_000300: 2.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.994e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

VQSLOD
type: SiteQuality
SIO_000300: 2.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.91e-1

QD
type: SiteQuality
SIO_000300: 1.256e1

DP
type: SiteQuality
SIO_000300: 2.430393e6

GenotypeQuality
all individuals: 3905
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1707
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1412
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3652
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11720
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.532707988474036e-5
allele num: 65244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.43083e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e-1

FS
type: SiteQuality
SIO_000300: 6.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.264e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

MQRankSum
type: SiteQuality
SIO_000300: -1.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.28e-1

QD
type: SiteQuality
SIO_000300: 1.119e1

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1708
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10429
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3654
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11720
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.532191340054546e-4
allele num: 65266
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.128668171557562e-3
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.462603878116343e-4
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.973554371422933e-4
allele num: 10134
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.445e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.46e-1

QD
type: SiteQuality
SIO_000300: 1.196e1

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.55e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

DP
type: SiteQuality
SIO_000300: 2.432626e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.95e-1

GenotypeQuality
all individuals: 186
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3655
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3904
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.062974761087968e-5
allele num: 65296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10146
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.25e-1

QD
type: SiteQuality
SIO_000300: 1.182e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.432351e6

VQSLOD
type: SiteQuality
SIO_000300: -6.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

MQ
type: SiteQuality
SIO_000300: 5.808e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.93e-1

GenotypeQuality
all individuals: 1414
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3654
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10445
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11715
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2672
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.017e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.18e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.11e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

FS
type: SiteQuality
SIO_000300: 2.866e0

DP
type: SiteQuality
SIO_000300: 2.43257e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.162e0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3910
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11715
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 3654
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1709
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.124419684308263e-4
allele num: 8616
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.43354e6

VQSLOD
type: SiteQuality
SIO_000300: 4.52e-1

MQ
type: SiteQuality
SIO_000300: 5.905e1

QD
type: SiteQuality
SIO_000300: 1.156e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.024e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.35e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

FS
type: SiteQuality
SIO_000300: 5.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

GenotypeQuality
all individuals: 11708
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3912
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1710
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10192
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530128224745234e-5
allele num: 65354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.1e0

DP
type: SiteQuality
SIO_000300: 2.43332e6

VQSLOD
type: SiteQuality
SIO_000300: -1.423e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e-1

MQ
type: SiteQuality
SIO_000300: 5.849e1

MQRankSum
type: SiteQuality
SIO_000300: 6.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.273e1

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2675
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11712
bin: 9.75e1
variant carriers: 33

GenotypeQuality
all individuals: 3657
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1711
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 3.058384561274735e-4
allele num: 65394
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160362032954282e-4
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.423654871546292e-4
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.327505625757314e-4
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.959247648902821e-4
allele num: 10208
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.126126126126126e-3
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.913e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.22e-2

QD
type: SiteQuality
SIO_000300: 1.149e1

MQRankSum
type: SiteQuality
SIO_000300: 6.39e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

DP
type: SiteQuality
SIO_000300: 2.436274e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10471
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24282
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3917
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.058103975535168e-5
allele num: 65400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.361e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

QD
type: SiteQuality
SIO_000300: 1.14e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQ
type: SiteQuality
SIO_000300: 5.933e1

MQRankSum
type: SiteQuality
SIO_000300: -1.79e-1

DP
type: SiteQuality
SIO_000300: 2.4335e6

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

GenotypeQuality
all individuals: 3661
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11688
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2675
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3917
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1712
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10218
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65406
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.320724065908564e-4
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.28e0

FS
type: SiteQuality
SIO_000300: 1.004e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

DP
type: SiteQuality
SIO_000300: 2.433475e6

VQSLOD
type: SiteQuality
SIO_000300: -1.289e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

QD
type: SiteQuality
SIO_000300: 1.015e1

GenotypeQuality
all individuals: 97
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3803
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2591
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1337
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1635
bin: 9.25e1
variant carriers: 3

European (Finnish)
type: Population
allele count: 44
allele frequency: 6.652555185969156e-3
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 989
allele frequency: 1.511954992967651e-2
allele num: 65412
num of homozygotes: 20

South Asian
type: Population
allele count: 1326
allele frequency: 8.034415899175958e-2
allele num: 16504
num of homozygotes: 66

East Asian
type: Population
allele count: 341
allele frequency: 3.9568345323741e-2
allele num: 8618
num of homozygotes: 5

African
type: Population
allele count: 2160
allele frequency: 2.112262859378056e-1
allele num: 10226
num of homozygotes: 229

Latino
type: Population
allele count: 207
allele frequency: 1.791587329063528e-2
allele num: 11554
num of homozygotes: 2

Other
type: Population
allele count: 27
allele frequency: 3.040540540540541e-2
allele num: 888
num of homozygotes: 4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.27e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.374e0

DP
type: SiteQuality
SIO_000300: 2.798266e6

MQ
type: SiteQuality
SIO_000300: 5.832e1

GenotypeQuality
all individuals: 1813
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3914
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25596
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4171
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2885
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528677999266235e-5
allele num: 65416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.411e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.16e-1

DP
type: SiteQuality
SIO_000300: 2.296323e6

FS
type: SiteQuality
SIO_000300: 3.918e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e0

VQSLOD
type: SiteQuality
SIO_000300: 7.52e-1

GenotypeQuality
all individuals: 25608
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1812
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3915
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65426
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.761e0

MQ
type: SiteQuality
SIO_000300: 5.9e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.179e1

MQRankSum
type: SiteQuality
SIO_000300: -2.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.939e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e0

DP
type: SiteQuality
SIO_000300: 2.296445e6

GenotypeQuality
all individuals: 8812
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4174
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1486
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1812
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3916
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528444349341241e-5
allele num: 65426
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.065e0

MQRankSum
type: SiteQuality
SIO_000300: -7.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.46e-1

DP
type: SiteQuality
SIO_000300: 2.29653e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.663e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.013e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

QD
type: SiteQuality
SIO_000300: 1.211e1

MQ
type: SiteQuality
SIO_000300: 5.921e1

GenotypeQuality
all individuals: 85
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2886
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11184
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1486
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3915
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1812
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528070657987225e-5
allele num: 65442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.464e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.28e-1

FS
type: SiteQuality
SIO_000300: 2.807e0

MQ
type: SiteQuality
SIO_000300: 5.913e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.01e0

VQSLOD
type: SiteQuality
SIO_000300: -5.128e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.236e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.45e-1

DP
type: SiteQuality
SIO_000300: 2.296588e6

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1486
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3917
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2885
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11185
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1812
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65442
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.95e-1

FS
type: SiteQuality
SIO_000300: 2.535e0

DP
type: SiteQuality
SIO_000300: 2.296449e6

QD
type: SiteQuality
SIO_000300: 1.368e1

MQ
type: SiteQuality
SIO_000300: 5.886e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.237e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.539e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

GenotypeQuality
all individuals: 86
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2885
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11185
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.777082518576456e-5
allele num: 10228
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.07e0

MQ
type: SiteQuality
SIO_000300: 5.913e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.67e-1

DP
type: SiteQuality
SIO_000300: 2.296351e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.054e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -9.589e-1

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8808
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1812
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2885
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.658008658008658e-5
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65442
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.64e-1

FS
type: SiteQuality
SIO_000300: 8.169999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.498e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

QD
type: SiteQuality
SIO_000300: 8.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -9.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.024e0

DP
type: SiteQuality
SIO_000300: 2.296338e6

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1484
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3917
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1812
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8808
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2886
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4170
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528070657987225e-5
allele num: 65442
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.182e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -8.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.117e0

DP
type: SiteQuality
SIO_000300: 2.296315e6

MQ
type: SiteQuality
SIO_000300: 5.621e1

QD
type: SiteQuality
SIO_000300: 9.48e0

GenotypeQuality
all individuals: 3916
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8807
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1484
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2886
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 25617
bin: 6.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527977263698316e-5
allele num: 65446
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.119e1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.296338e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.32e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.019e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

FS
type: SiteQuality
SIO_000300: 1.346e0

VQSLOD
type: SiteQuality
SIO_000300: 1.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2886
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65440
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.367e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.815e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.51e-1

QD
type: SiteQuality
SIO_000300: 1.227e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.7e-2

DP
type: SiteQuality
SIO_000300: 2.296165e6

MQ
type: SiteQuality
SIO_000300: 5.49e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2886
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65440
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.5e-2

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
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SIO_000300: 2.297305e6

BaseQRankSum
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SIO_000300: 2.92e0

MQRankSum
type: SiteQuality
SIO_000300: -1.9e-1

FS
type: SiteQuality
SIO_000300: 1.351e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.61e-1

MQ
type: SiteQuality
SIO_000300: 5.927e1

QD
type: SiteQuality
SIO_000300: 1.151e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 25

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3915
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.680929095354523e-4
allele num: 65440
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.043599257884972e-3
allele num: 8624
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.777082518576456e-5
allele num: 10228
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
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allele count: 4
allele frequency: 3.463203463203463e-4
allele num: 11550
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

FS
type: SiteQuality
SIO_000300: 1.351e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.5e-2

DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.61e-1

QD
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VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

MQRankSum
type: SiteQuality
SIO_000300: -1.9e-1

MQ
type: SiteQuality
SIO_000300: 5.927e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 4171
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528070657987225e-5
allele num: 65442
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.897e1

QD
type: SiteQuality
SIO_000300: 1.505e1

DP
type: SiteQuality
SIO_000300: 2.295131e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.97e-2

FS
type: SiteQuality
SIO_000300: 1.266e0

MQRankSum
type: SiteQuality
SIO_000300: -1.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.058e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.53e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.705e-1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1484
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1812
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65442
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.95e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

MQ
type: SiteQuality
SIO_000300: 5.88e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.49e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.29505e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65442
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.01e0

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
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BaseQRankSum
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ClippingRankSum
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MQ
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.778994719342852e-5
allele num: 10226
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

QD
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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DP
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 888
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.528117359413203e-5
allele num: 65440
num of homozygotes: 0

MQRankSum
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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FS
type: SiteQuality
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DP
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MQ
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BaseQRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2889
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 3
allele frequency: 1.817741153659719e-4
allele num: 16504
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.528117359413203e-5
allele num: 65440
num of homozygotes: 0

Other
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allele num: 888
num of homozygotes: 0

VQSLOD
type: SiteQuality
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DP
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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MQ
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.065e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 2889
bin: 8.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10222
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.63821892393321e-4
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-2

MQRankSum
type: SiteQuality
SIO_000300: -9.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e-1

MQ
type: SiteQuality
SIO_000300: 5.898e1

FS
type: SiteQuality
SIO_000300: 3.453e0

VQSLOD
type: SiteQuality
SIO_000300: 6.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -9.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

QD
type: SiteQuality
SIO_000300: 1.365e1

DP
type: SiteQuality
SIO_000300: 2.294324e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

East Asian
type: Population
allele count: 2
allele frequency: 2.319109461966605e-4
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528818223513224e-5
allele num: 65410
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 3
allele frequency: 1.817741153659719e-4
allele num: 16504
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.02e0

MQ
type: SiteQuality
SIO_000300: 5.937e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.62e-1

FS
type: SiteQuality
SIO_000300: 4.719e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-1

QD
type: SiteQuality
SIO_000300: 1.339e1

DP
type: SiteQuality
SIO_000300: 2.293565e6

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.528864970645792e-5
allele num: 65408
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
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VQSLOD
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SIO_000300: 1.18e0

BaseQRankSum
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SIO_000300: -2.582e0

MQ
type: SiteQuality
SIO_000300: 5.91e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.46e-1

QD
type: SiteQuality
SIO_000300: 1.365e1

MQRankSum
type: SiteQuality
SIO_000300: 5.74e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65408
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.293092e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.582e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.74e-1

MQ
type: SiteQuality
SIO_000300: 5.91e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

QD
type: SiteQuality
SIO_000300: 1.365e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.46e-1

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 25
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GenotypeQuality
all individuals: 137
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.528864970645792e-5
allele num: 65408
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.96e-1

MQ
type: SiteQuality
SIO_000300: 5.899e1

DP
type: SiteQuality
SIO_000300: 2.293428e6

QD
type: SiteQuality
SIO_000300: 1.304e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

MQRankSum
type: SiteQuality
SIO_000300: 8.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 179
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2891
bin: 8.25e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
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allele count: 6
allele frequency: 9.173189823874755e-5
allele num: 65408
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.96e-1

MQ
type: SiteQuality
SIO_000300: 5.899e1

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

DP
type: SiteQuality
SIO_000300: 2.293428e6

MQRankSum
type: SiteQuality
SIO_000300: 8.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

BaseQRankSum
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SIO_000300: 3.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.78e-1

QD
type: SiteQuality
SIO_000300: 1.304e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.319109461966605e-4
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.896200548374462e-4
allele num: 10212
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
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European (Finnish)
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allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.11545988258317e-5
allele num: 65408
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.2e-1

QD
type: SiteQuality
SIO_000300: 1.304e1

DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.78e-1

MQ
type: SiteQuality
SIO_000300: 5.899e1

FS
type: SiteQuality
SIO_000300: 6.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.9e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.792401096748923e-5
allele num: 10212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 26
allele frequency: 1.57537566650509e-3
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.126126126126126e-3
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.529005229197884e-5
allele num: 65402
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e0

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
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MQ
type: SiteQuality
SIO_000300: 5.855e1

MQRankSum
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 12
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GenotypeQuality
all individuals: 10
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Other
type: Population
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele num: 8624
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South Asian
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African
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allele frequency: 9.796238244514106e-5
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Latino
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allele frequency: 6.062705698943357e-4
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
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allele count: 18
allele frequency: 2.752461924276714e-4
allele num: 65396
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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VQSLOD
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DP
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
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allele num: 8624
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Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529098749197223e-5
allele num: 65398
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Latino
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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num of homozygotes: 0

MQ
type: SiteQuality
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QD
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VQSLOD
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InbreedingCoeff
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FS
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BaseQRankSum
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ReadPosRankSum
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DP
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MQRankSum
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 25457
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.059039461609055e-5
allele num: 65380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10204
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.311e0

DP
type: SiteQuality
SIO_000300: 2.286607e6

FS
type: SiteQuality
SIO_000300: 1.817e0

MQ
type: SiteQuality
SIO_000300: 5.895e1

VQSLOD
type: SiteQuality
SIO_000300: 1.59e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-2

QD
type: SiteQuality
SIO_000300: 1.416e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.19e-1

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1484
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2886
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3905
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65356
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.86e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.58e-1

QD
type: SiteQuality
SIO_000300: 1.435e1

DP
type: SiteQuality
SIO_000300: 2.285461e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

FS
type: SiteQuality
SIO_000300: 6.82e0

VQSLOD
type: SiteQuality
SIO_000300: 6.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

GenotypeQuality
all individuals: 8685
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2889
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4170
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.031405359524675e-4
allele num: 16494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.04e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.953000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.284194e6

FS
type: SiteQuality
SIO_000300: 2.097e0

MQRankSum
type: SiteQuality
SIO_000300: -1.076e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.73e-1

MQ
type: SiteQuality
SIO_000300: 5.671e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.92e-1

QD
type: SiteQuality
SIO_000300: 1.07e0

GenotypeQuality
all individuals: 11124
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25265
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1810
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2889
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.817396426467701e-5
allele num: 10186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.517911353976928e-4
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.654154675157675e-5
allele num: 65324
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 31
allele frequency: 3.595453491069357e-3
allele num: 8622
num of homozygotes: 1

Other
type: Population
allele count: 2
allele frequency: 2.262443438914027e-3
allele num: 884
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.07e0

DP
type: SiteQuality
SIO_000300: 2.284194e6

FS
type: SiteQuality
SIO_000300: 2.097e0

MQRankSum
type: SiteQuality
SIO_000300: -1.076e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.92e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.953000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.04e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e-1

MQ
type: SiteQuality
SIO_000300: 5.671e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.73e-1

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1478
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25261
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2892
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3902
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.062411955656275e-5
allele num: 65308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.279969e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-1

FS
type: SiteQuality
SIO_000300: 9.688000000000001e0

QD
type: SiteQuality
SIO_000300: 2.715e1

MQRankSum
type: SiteQuality
SIO_000300: 4.89e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.709e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.625e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4163
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25170
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8633
bin: 9.75e1
variant carriers: 9

Latino
type: Population
allele count: 1
allele frequency: 8.674531575294934e-5
allele num: 11528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.072205373280642e-4
allele num: 65286
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.28e-1

DP
type: SiteQuality
SIO_000300: 2.279343e6

FS
type: SiteQuality
SIO_000300: 1.209e0

VQSLOD
type: SiteQuality
SIO_000300: 2.11e0

QD
type: SiteQuality
SIO_000300: 1.375e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.03e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

MQRankSum
type: SiteQuality
SIO_000300: -2.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

GenotypeQuality
all individuals: 1808
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3896
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8648
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 11113
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2887
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4166
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.517911353976928e-4
allele num: 6588
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16767865483419e-4
allele num: 8564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65262
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.845e0

VQSLOD
type: SiteQuality
SIO_000300: -1.351e0

MQRankSum
type: SiteQuality
SIO_000300: -1.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

QD
type: SiteQuality
SIO_000300: 1.444e1

DP
type: SiteQuality
SIO_000300: 2.277327e6

MQ
type: SiteQuality
SIO_000300: 5.851e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.84e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 1474
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11087
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65246
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.852216748768474e-5
allele num: 10150
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.671e0

MQRankSum
type: SiteQuality
SIO_000300: 8.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e-1

QD
type: SiteQuality
SIO_000300: 4.85e0

MQ
type: SiteQuality
SIO_000300: 5.921e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.14e0

DP
type: SiteQuality
SIO_000300: 2.277128e6

VQSLOD
type: SiteQuality
SIO_000300: 3.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1762
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11033
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3863
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 75
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 24987
bin: 6.25e1
variant carriers: 1

Latino
type: Population
allele count: 222
allele frequency: 1.926414439430753e-2
allele num: 11524
num of homozygotes: 2

African
type: Population
allele count: 65
allele frequency: 6.398897420752117e-3
allele num: 10158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2058
allele frequency: 3.155570548008219e-2
allele num: 65218
num of homozygotes: 29

European (Finnish)
type: Population
allele count: 47
allele frequency: 7.140686721361289e-3
allele num: 6582
num of homozygotes: 1

East Asian
type: Population
allele count: 3
allele frequency: 3.507131166705635e-4
allele num: 8554
num of homozygotes: 0

Other
type: Population
allele count: 18
allele frequency: 2.050113895216401e-2
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 51
allele frequency: 3.092408440455979e-3
allele num: 16492
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.58e-1

MQ
type: SiteQuality
SIO_000300: 5.939e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e0

QD
type: SiteQuality
SIO_000300: 1.412e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.09e-2

DP
type: SiteQuality
SIO_000300: 2.283757e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

FS
type: SiteQuality
SIO_000300: 1.143e0

VQSLOD
type: SiteQuality
SIO_000300: 3.73e0

GenotypeQuality
all individuals: 2832
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24987
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8975
bin: 9.75e1
variant carriers: 27

GenotypeQuality
all individuals: 75
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4123
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.819063788503517e-4
allele num: 16492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.844457570387872e-5
allele num: 10158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 2.913306142476003e-4
allele num: 65218
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.676174888940846e-4
allele num: 8554
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.143e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.09e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.58e-1

MQ
type: SiteQuality
SIO_000300: 5.939e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

DP
type: SiteQuality
SIO_000300: 2.283757e6

QD
type: SiteQuality
SIO_000300: 1.412e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e0

VQSLOD
type: SiteQuality
SIO_000300: 3.73e0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3863
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11033
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8975
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1762
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.666595111778956e-5
allele num: 65218
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10158
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.73e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

FS
type: SiteQuality
SIO_000300: 1.143e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.09e-2

DP
type: SiteQuality
SIO_000300: 2.283757e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

QD
type: SiteQuality
SIO_000300: 1.412e1

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1496
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6680
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3978
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.534683855125844e-5
allele num: 65160
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.341372044017794e-4
allele num: 8542
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.069434328720563e-5
allele num: 16476
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e-1

DP
type: SiteQuality
SIO_000300: 2.179395e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 5.552e1

MQRankSum
type: SiteQuality
SIO_000300: -1.688e0

QD
type: SiteQuality
SIO_000300: 1.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

GenotypeQuality
all individuals: 26051
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4267
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2918
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1828
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65160
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213886865744113e-4
allele num: 16476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

DP
type: SiteQuality
SIO_000300: 2.179395e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

MQRankSum
type: SiteQuality
SIO_000300: -1.688e0

MQ
type: SiteQuality
SIO_000300: 5.552e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e-1

QD
type: SiteQuality
SIO_000300: 1.77e0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4267
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1496
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65160
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.677542519958348e-5
allele num: 11524
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.179395e6

MQ
type: SiteQuality
SIO_000300: 5.552e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.688e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 1.77e0

Latino
type: Population
allele count: 1
allele frequency: 8.677542519958348e-5
allele num: 11524
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.871668311944718e-5
allele num: 10130
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.069434328720563e-5
allele num: 16476
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.77e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.688e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

DP
type: SiteQuality
SIO_000300: 2.179395e6

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.552e1

GenotypeQuality
all individuals: 110
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2918
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4267
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.208103130755064e-5
allele num: 65160
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.069434328720563e-5
allele num: 16476
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.341372044017794e-4
allele num: 8542
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.552e1

DP
type: SiteQuality
SIO_000300: 2.179395e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.688e0

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e-1

QD
type: SiteQuality
SIO_000300: 1.77e0

East Asian
type: Population
allele count: 2
allele frequency: 2.341372044017794e-4
allele num: 8542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65160
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.179395e6

MQ
type: SiteQuality
SIO_000300: 5.552e1

QD
type: SiteQuality
SIO_000300: 1.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.688e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

GenotypeQuality
all individuals: 11504
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4275
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6729
bin: 9.75e1
variant carriers: 206

GenotypeQuality
all individuals: 1825
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.141552511415525e-3
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

African
type: Population
allele count: 189
allele frequency: 1.863537763754684e-2
allele num: 10142
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.071064430931761e-5
allele num: 65124
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Latino
type: Population
allele count: 14
allele frequency: 1.214855952794169e-3
allele num: 11524
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.232e0

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

MQ
type: SiteQuality
SIO_000300: 5.921e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

FS
type: SiteQuality
SIO_000300: 2.458e0

QD
type: SiteQuality
SIO_000300: 1.464e1

DP
type: SiteQuality
SIO_000300: 2.175107e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-2

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3986
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4277
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2933
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6547
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65094
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.519295047098146e-4
allele num: 6582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10150
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.447e1

VQSLOD
type: SiteQuality
SIO_000300: 3.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.54e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.169e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.26e-1

DP
type: SiteQuality
SIO_000300: 2.165226e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11514
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 727
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1810
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65108
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.588e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.171807e6

QD
type: SiteQuality
SIO_000300: 9.42e0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4259
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3970
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1807
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1493
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6554
bin: 9.75e1
variant carriers: 14

African
type: Population
allele count: 16
allele frequency: 1.584158415841584e-3
allele num: 10100
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65036
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.165674e6

FS
type: SiteQuality
SIO_000300: 2.362e0

VQSLOD
type: SiteQuality
SIO_000300: -5.597e0

QD
type: SiteQuality
SIO_000300: 2.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.22e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.204e0

MQRankSum
type: SiteQuality
SIO_000300: 2.1e-2

MQ
type: SiteQuality
SIO_000300: 5.871e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.77e0

GenotypeQuality
all individuals: 211
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11482
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2907
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1797
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1489
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10074
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537137235612395e-5
allele num: 65056
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

MQ
type: SiteQuality
SIO_000300: 5.933e1

VQSLOD
type: SiteQuality
SIO_000300: 2.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e0

DP
type: SiteQuality
SIO_000300: 2.163375e6

QD
type: SiteQuality
SIO_000300: 1.53e1

GenotypeQuality
all individuals: 99
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25307
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1686
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11264
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540025256414205e-5
allele num: 64934
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.81e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.96e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.88e0

MQRankSum
type: SiteQuality
SIO_000300: 1.14e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

QD
type: SiteQuality
SIO_000300: 1.565e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.44e-1

DP
type: SiteQuality
SIO_000300: 2.146342e6

GenotypeQuality
all individuals: 25307
bin: 6.25e1
variant carriers: 5

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1686
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 3875
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 11264
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2784
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1441
bin: 8.75e1
variant carriers: 4

Latino
type: Population
allele count: 1293
allele frequency: 1.125522284122563e-1
allele num: 11488
num of homozygotes: 84

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.523461304082876e-4
allele num: 6564
num of homozygotes: 0

East Asian
type: Population
allele count: 20
allele frequency: 2.347417840375587e-3
allele num: 8520
num of homozygotes: 0

African
type: Population
allele count: 515
allele frequency: 5.152060824329732e-2
allele num: 9996
num of homozygotes: 12

European (Non-Finnish)
type: Population
allele count: 24
allele frequency: 3.696060615394092e-4
allele num: 64934
num of homozygotes: 1

Other
type: Population
allele count: 6
allele frequency: 6.864988558352402e-3
allele num: 874
num of homozygotes: 0

South Asian
type: Population
allele count: 29
allele frequency: 1.760777170613236e-3
allele num: 16470
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.96e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.88e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.51e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.14e-1

DP
type: SiteQuality
SIO_000300: 2.146342e6

QD
type: SiteQuality
SIO_000300: 1.565e1

GenotypeQuality
all individuals: 99
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1686
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6853
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1141
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540025256414205e-5
allele num: 64934
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214329083181542e-4
allele num: 16470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.14e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

VQSLOD
type: SiteQuality
SIO_000300: 3.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.96e-2

QD
type: SiteQuality
SIO_000300: 1.565e1

DP
type: SiteQuality
SIO_000300: 2.146342e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.81e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.44e-1

GenotypeQuality
all individuals: 5208
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1369
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11529
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4251
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25846
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.54054720236628e-5
allele num: 64912
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9968
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.349072116513977e-4
allele num: 8514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.55e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.886e1

DP
type: SiteQuality
SIO_000300: 2.104988e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.7e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-3

QD
type: SiteQuality
SIO_000300: 7.92e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.12e-1

GenotypeQuality
all individuals: 3959
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2849
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.540547202366281e-4
allele num: 64912
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9968
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.886e1

MQRankSum
type: SiteQuality
SIO_000300: -7.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.55e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.12e-1

DP
type: SiteQuality
SIO_000300: 2.104988e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.92e0

GenotypeQuality
all individuals: 135
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5208
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4251
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9968
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.621641607098841e-5
allele num: 64912
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.12e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.886e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-3

DP
type: SiteQuality
SIO_000300: 2.104988e6

QD
type: SiteQuality
SIO_000300: 7.92e0

GenotypeQuality
all individuals: 229
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1390
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4847
bin: 9.75e1
variant carriers: 27

GenotypeQuality
all individuals: 333
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.462144527883787e-4
allele num: 16246
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.497114880223815e-4
allele num: 11438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.041449697979588e-4
allele num: 9602
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.180358829084042e-4
allele num: 8472
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.633698952717358e-4
allele num: 64548
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.557e0

MQRankSum
type: SiteQuality
SIO_000300: -1.64e-1

DP
type: SiteQuality
SIO_000300: 2.103584e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.7e-1

FS
type: SiteQuality
SIO_000300: 1.907e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.359e0

MQ
type: SiteQuality
SIO_000300: 5.873e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.9e-1

QD
type: SiteQuality
SIO_000300: 1.1e0

GenotypeQuality
all individuals: 1390
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 25615
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3827
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4103
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 269
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2715
bin: 8.25e1
variant carriers: 1

South Asian
type: Population
allele count: 7
allele frequency: 4.308752923796627e-4
allele num: 16246
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.721435316336166e-4
allele num: 8472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.748557440111908e-4
allele num: 11438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.084464274648324e-4
allele num: 64548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

African
type: Population
allele count: 45
allele frequency: 4.686523640908144e-3
allele num: 9602
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.64e-1

FS
type: SiteQuality
SIO_000300: 1.907e0

MQ
type: SiteQuality
SIO_000300: 5.873e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.7e-1

QD
type: SiteQuality
SIO_000300: 1.1e0

VQSLOD
type: SiteQuality
SIO_000300: -1.359e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.557e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.9e-1

DP
type: SiteQuality
SIO_000300: 2.103584e6

GenotypeQuality
all individuals: 333
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1390
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1420
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25615
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11324
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3827
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.549234678069034e-5
allele num: 64548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16246
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.103584e6

MQRankSum
type: SiteQuality
SIO_000300: -1.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.557e0

FS
type: SiteQuality
SIO_000300: 1.907e0

VQSLOD
type: SiteQuality
SIO_000300: -1.359e0

MQ
type: SiteQuality
SIO_000300: 5.873e1

QD
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-2