17-30349616-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349616
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349616
    reference: chr 17
allele count: 1
allele frequency: 8.314901967305805e-6
allele num: 120266
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1451G>A
  hgvsp: ENSP00000340519.7:p.Ser484Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1487G>A
  hgvsp: ENSP00000463564.1:p.Ser496Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.308G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1451G>A
  hgvsp: ENSP00000378202.3:p.Ser484Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1532G>A
  hgvsp: ENSP00000332536.7:p.Ser511Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1205G>A
  hgvsp: ENSP00000443345.2:p.Ser402Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1490G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1487G>A
  hgvsp: ENSP00000463081.1:p.Ser496Asn
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12076
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36278
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5671
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3095
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36738
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser484Asn
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

17-30349617-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349617
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349617
    reference: chr 17
allele count: 2
allele frequency: 1.663035705376594e-5
allele num: 120262
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1452C>G
  hgvsp: ENSP00000378202.3:p.Ser484Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1491C>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1206C>G
  hgvsp: ENSP00000443345.2:p.Ser402Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1452C>G
  hgvsp: ENSP00000340519.7:p.Ser484Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1533C>G
  hgvsp: ENSP00000332536.7:p.Ser511Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1488C>G
  hgvsp: ENSP00000463564.1:p.Ser496Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.309C>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1488C>G
  hgvsp: ENSP00000463081.1:p.Ser496Arg
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 36267
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4632
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36758
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6908
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser484Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/17-30349631-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349631
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349631
    reference: chr 17
allele count: 1
allele frequency: 8.347245409015026e-6
allele num: 119800
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1547C>A
  hgvsp: ENSP00000332536.7:p.Thr516Lys
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.323C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1502C>A
  hgvsp: ENSP00000463564.1:p.Thr501Lys
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1220C>A
  hgvsp: ENSP00000443345.2:p.Thr407Lys
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1466C>A
  hgvsp: ENSP00000340519.7:p.Thr489Lys
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1466C>A
  hgvsp: ENSP00000378202.3:p.Thr489Lys
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1505C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1502C>A
  hgvsp: ENSP00000463081.1:p.Thr501Lys
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11891
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36053
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2458
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr489Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

17-30349638-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349638
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349638
    reference: chr 17
allele count: 3
allele frequency: 2.510418235678064e-5
allele num: 119502
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1473A>G
  hgvsp: ENST00000341671.7:c.1473A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1512A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1509A>G
  hgvsp: ENST00000578674.1:c.1509A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.330A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1554A>G
  hgvsp: ENST00000327564.7:c.1554A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1509A>G
  hgvsp: ENST00000584368.1:c.1509A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1473A>G
  hgvsp: ENST00000394713.3:c.1473A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1227A>G
  hgvsp: ENST00000543378.2:c.1227A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11875
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3093
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro491Pro
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum

17-30349639-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349639
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349639
    reference: chr 17
allele count: 1
allele frequency: 8.370162046337218e-6
allele num: 119472
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.331C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1474C>T
  hgvsp: ENSP00000340519.7:p.Pro492Ser
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1510C>T
  hgvsp: ENSP00000463564.1:p.Pro504Ser
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1228C>T
  hgvsp: ENSP00000443345.2:p.Pro410Ser
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1513C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1474C>T
  hgvsp: ENSP00000378202.3:p.Pro492Ser
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1555C>T
  hgvsp: ENSP00000332536.7:p.Pro519Ser
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1510C>T
  hgvsp: ENSP00000463081.1:p.Pro504Ser
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35995
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11880
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2457
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro492Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP

17-30349641-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349641
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349641
    reference: chr 17
allele count: 427
allele frequency: 3.574717455002093e-3
allele num: 119450
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1512T>A
  hgvsp: ENST00000578674.1:c.1512T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1512T>A
  hgvsp: ENST00000584368.1:c.1512T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1557T>A
  hgvsp: ENST00000327564.7:c.1557T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1230T>A
  hgvsp: ENST00000543378.2:c.1230T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1476T>A
  hgvsp: ENST00000394713.3:c.1476T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.333T>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1476T>A
  hgvsp: ENST00000341671.7:c.1476T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1515T>A
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 1.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 35766
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 5.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 6.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11808
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 4594
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 9.75e1
  variant carriers: 132
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6844
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2221
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro492Pro
num of homozygotes: 8
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

17-30349646-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349646
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349646
    reference: chr 17
allele count: 77
allele frequency: 6.452694209335456e-4
allele num: 119330
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.338A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1562A>G
  hgvsp: ENSP00000332536.7:p.Lys521Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1481A>G
  hgvsp: ENSP00000378202.3:p.Lys494Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1481A>G
  hgvsp: ENSP00000340519.7:p.Lys494Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1235A>G
  hgvsp: ENSP00000443345.2:p.Lys412Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1517A>G
  hgvsp: ENSP00000463564.1:p.Lys506Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1517A>G
  hgvsp: ENSP00000463081.1:p.Lys506Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1520A>G
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 35706
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 11824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36045
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 954
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1135
  bin: 2.25e1
  variant carriers: 1
hgvs: p.Lys494Arg
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

17-30349655-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349655
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349655
    reference: chr 17
allele count: 2
allele frequency: 1.68019221398928e-5
allele num: 119034
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1490C>T
  hgvsp: ENSP00000378202.3:p.Ser497Phe
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1244C>T
  hgvsp: ENSP00000443345.2:p.Ser415Phe
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.347C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1526C>T
  hgvsp: ENSP00000463081.1:p.Ser509Phe
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1490C>T
  hgvsp: ENSP00000340519.7:p.Ser497Phe
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1526C>T
  hgvsp: ENSP00000463564.1:p.Ser509Phe
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1529C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1571C>T
  hgvsp: ENSP00000332536.7:p.Ser524Phe
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11846
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4616
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6867
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1117
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser497Phe
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD

17-30349658-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349658
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349658
    reference: chr 17
allele count: 3
allele frequency: 2.52465748813411e-5
allele num: 118828
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.350C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1529C>T
  hgvsp: ENSP00000463081.1:p.Ser510Leu
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1493C>T
  hgvsp: ENSP00000340519.7:p.Ser498Leu
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1532C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1247C>T
  hgvsp: ENSP00000443345.2:p.Ser416Leu
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1529C>T
  hgvsp: ENSP00000463564.1:p.Ser510Leu
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1574C>T
  hgvsp: ENSP00000332536.7:p.Ser525Leu
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1493C>T
  hgvsp: ENSP00000378202.3:p.Ser498Leu
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4614
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11860
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5992
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2442
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser498Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum

17-30349659-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349659
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349659
    reference: chr 17
allele count: 5
allele frequency: 4.207266791201764e-5
allele num: 118842
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1494G>A
  hgvsp: ENST00000394713.3:c.1494G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1533G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1494G>A
  hgvsp: ENST00000341671.7:c.1494G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1530G>A
  hgvsp: ENST00000578674.1:c.1530G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1248G>A
  hgvsp: ENST00000543378.2:c.1248G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.351G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1575G>A
  hgvsp: ENST00000327564.7:c.1575G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1530G>A
  hgvsp: ENST00000584368.1:c.1530G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4614
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5997
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser498Ser
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

17-30349679-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349679
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349679
    reference: chr 17
allele count: 1
allele frequency: 8.399832003359932e-6
allele num: 119050
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1268C>G
  hgvsp: ENSP00000443345.2:p.Ser423Cys
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1514C>G
  hgvsp: ENSP00000378202.3:p.Ser505Cys
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1550C>G
  hgvsp: ENSP00000463081.1:p.Ser517Cys
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.371C>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1553C>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1550C>G
  hgvsp: ENSP00000463564.1:p.Ser517Cys
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1595C>G
  hgvsp: ENSP00000332536.7:p.Ser532Cys
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1514C>G
  hgvsp: ENSP00000340519.7:p.Ser505Cys
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4625
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11880
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser505Cys
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

17-30349681-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349681
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349681
    reference: chr 17
allele count: 1
allele frequency: 8.399267583866688e-6
allele num: 119058
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1552G>C
  hgvsp: ENSP00000463564.1:p.Glu518Gln
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1516G>C
  hgvsp: ENSP00000378202.3:p.Glu506Gln
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1552G>C
  hgvsp: ENSP00000463081.1:p.Glu518Gln
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1516G>C
  hgvsp: ENSP00000340519.7:p.Glu506Gln
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1270G>C
  hgvsp: ENSP00000443345.2:p.Glu424Gln
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1555G>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1597G>C
  hgvsp: ENSP00000332536.7:p.Glu533Gln
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.373G>C
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11873
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35934
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 958
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1198
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2237
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu506Gln
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum

17-30349688-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349688
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349688
    reference: chr 17
allele count: 2
allele frequency: 1.679740648043942e-5
allele num: 119066
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1523C>T
  hgvsp: ENSP00000340519.7:p.Ala508Val
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.380C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1559C>T
  hgvsp: ENSP00000463564.1:p.Ala520Val
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1604C>T
  hgvsp: ENSP00000332536.7:p.Ala535Val
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1277C>T
  hgvsp: ENSP00000443345.2:p.Ala426Val
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1523C>T
  hgvsp: ENSP00000378202.3:p.Ala508Val
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1559C>T
  hgvsp: ENSP00000463081.1:p.Ala520Val
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1562C>T
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35957
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4623
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2444
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala508Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

17-30349693-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349693
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349693
    reference: chr 17
allele count: 432
allele frequency: 3.628239799774915e-3
allele num: 119066
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1609G>C
  hgvsp: ENSP00000332536.7:p.Glu537Gln
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1564G>C
  hgvsp: ENSP00000463564.1:p.Glu522Gln
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1282G>C
  hgvsp: ENSP00000443345.2:p.Glu428Gln
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1567G>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1528G>C
  hgvsp: ENSP00000340519.7:p.Glu510Gln
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1564G>C
  hgvsp: ENSP00000463081.1:p.Glu522Gln
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.385G>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1528G>C
  hgvsp: ENSP00000378202.3:p.Glu510Gln
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11786
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4585
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35703
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 9.75e1
  variant carriers: 368
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3053
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1114
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2222
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2421
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu510Gln
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/17-30349713-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349713
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349713
    reference: chr 17
allele count: 1
allele frequency: 8.398280032249395e-6
allele num: 119072
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1548A>C
  hgvsp: ENST00000394713.3:c.1548A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1584A>C
  hgvsp: ENST00000584368.1:c.1584A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1302A>C
  hgvsp: ENST00000543378.2:c.1302A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1587A>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1629A>C
  hgvsp: ENST00000327564.7:c.1629A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.405A>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1584A>C
  hgvsp: ENST00000578674.1:c.1584A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1548A>C
  hgvsp: ENST00000341671.7:c.1548A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35658
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6346
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr516Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum

17-30349714-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349714
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349714
    reference: chr 17
allele count: 2
allele frequency: 1.679627794480743e-5
allele num: 119074
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1630A>G
  hgvsp: ENSP00000332536.7:p.Ser544Gly
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1549A>G
  hgvsp: ENSP00000340519.7:p.Ser517Gly
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1588A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1585A>G
  hgvsp: ENSP00000463564.1:p.Ser529Gly
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1303A>G
  hgvsp: ENSP00000443345.2:p.Ser435Gly
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1549A>G
  hgvsp: ENSP00000378202.3:p.Ser517Gly
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.406A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1585A>G
  hgvsp: ENSP00000463081.1:p.Ser529Gly
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4584
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6799
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6348
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Ser517Gly
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

17-30349743-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349743
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349743
    reference: chr 17
allele count: 35
allele frequency: 2.956830277942046e-4
allele num: 118370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1617C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.435C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1332C>T
  hgvsp: ENST00000543378.2:c.1332C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1659C>T
  hgvsp: ENST00000327564.7:c.1659C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1578C>T
  hgvsp: ENST00000394713.3:c.1578C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1614C>T
  hgvsp: ENST00000578674.1:c.1614C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1578C>T
  hgvsp: ENST00000341671.7:c.1578C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1614C>T
  hgvsp: ENST00000584368.1:c.1614C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 9.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11666
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 951
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6766
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Cys526Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum

17-30349744-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349744
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349744
    reference: chr 17
allele count: 2
allele frequency: 1.689617301681169e-5
allele num: 118370
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.436G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1579G>A
  hgvsp: ENSP00000378202.3:p.Gly527Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1615G>A
  hgvsp: ENSP00000463081.1:p.Gly539Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1333G>A
  hgvsp: ENSP00000443345.2:p.Gly445Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1615G>A
  hgvsp: ENSP00000463564.1:p.Gly539Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1660G>A
  hgvsp: ENSP00000332536.7:p.Gly554Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1618G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1579G>A
  hgvsp: ENSP00000340519.7:p.Gly527Arg
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11675
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 951
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35706
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly527Arg
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

17-30349748-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349748
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349748
    reference: chr 17
allele count: 2
allele frequency: 1.692104639750922e-5
allele num: 118196
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1622A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1619A>G
  hgvsp: ENSP00000463564.1:p.Asp540Gly
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1664A>G
  hgvsp: ENSP00000332536.7:p.Asp555Gly
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.440A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1619A>G
  hgvsp: ENSP00000463081.1:p.Asp540Gly
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1583A>G
  hgvsp: ENSP00000378202.3:p.Asp528Gly
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1583A>G
  hgvsp: ENSP00000340519.7:p.Asp528Gly
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1337A>G
  hgvsp: ENSP00000443345.2:p.Asp446Gly
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2220
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6371
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3046
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asp528Gly
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

17-30349748-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349748
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349748
    reference: chr 17
allele count: 2
allele frequency: 1.692104639750922e-5
allele num: 118196
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.440A>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1622A>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1583A>T
  hgvsp: ENSP00000340519.7:p.Asp528Val
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1583A>T
  hgvsp: ENSP00000378202.3:p.Asp528Val
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1619A>T
  hgvsp: ENSP00000463564.1:p.Asp540Val
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1619A>T
  hgvsp: ENSP00000463081.1:p.Asp540Val
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1337A>T
  hgvsp: ENSP00000443345.2:p.Asp446Val
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1664A>T
  hgvsp: ENSP00000332536.7:p.Asp555Val
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6764
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3046
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp528Val
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP

17-30349782-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349782
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349782
    reference: chr 17
allele count: 1
allele frequency: 8.50383522968859e-6
allele num: 117594
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1617G>A
  hgvsp: ENST00000394713.3:c.1617G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1698G>A
  hgvsp: ENST00000327564.7:c.1698G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1653G>A
  hgvsp: ENST00000578674.1:c.1653G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1617G>A
  hgvsp: ENST00000341671.7:c.1617G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.474G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1371G>A
  hgvsp: ENST00000543378.2:c.1371G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1653G>A
  hgvsp: ENST00000584368.1:c.1653G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1656G>A
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11570
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 974
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Lys539Lys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

17-30349792-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349792
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349792
    reference: chr 17
allele count: 1
allele frequency: 8.510638297872341e-6
allele num: 117500
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.484C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1381C>T
  hgvsp: ENSP00000443345.2:p.Arg461Cys
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1627C>T
  hgvsp: ENSP00000340519.7:p.Arg543Cys
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1663C>T
  hgvsp: ENSP00000463564.1:p.Arg555Cys
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1708C>T
  hgvsp: ENSP00000332536.7:p.Arg570Cys
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1666C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1663C>T
  hgvsp: ENSP00000463081.1:p.Arg555Cys
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1627C>T
  hgvsp: ENSP00000378202.3:p.Arg543Cys
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11540
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6373
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg543Cys
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

17-30349793-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349793
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349793
    reference: chr 17
allele count: 5
allele frequency: 4.25684074307412e-5
allele num: 117458
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1628G>A
  hgvsp: ENSP00000378202.3:p.Arg543His
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1382G>A
  hgvsp: ENSP00000443345.2:p.Arg461His
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1709G>A
  hgvsp: ENSP00000332536.7:p.Arg570His
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.485G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1664G>A
  hgvsp: ENSP00000463564.1:p.Arg555His
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1628G>A
  hgvsp: ENSP00000340519.7:p.Arg543His
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1664G>A
  hgvsp: ENSP00000463081.1:p.Arg555His
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1667G>A
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11535
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35275
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2220
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3038
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6378
  bin: 9.75e1
  variant carriers: 5
hgvs: p.Arg543His
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

17-30349798-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349798
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349798
    reference: chr 17
allele count: 2
allele frequency: 1.703345370307283e-5
allele num: 117416
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1669G>A
  hgvsp: ENSP00000463081.1:p.Val557Met
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1714G>A
  hgvsp: ENSP00000332536.7:p.Val572Met
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1669G>A
  hgvsp: ENSP00000463564.1:p.Val557Met
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1633G>A
  hgvsp: ENSP00000340519.7:p.Val545Met
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1672G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1387G>A
  hgvsp: ENSP00000443345.2:p.Val463Met
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.490G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1633G>A
  hgvsp: ENSP00000378202.3:p.Val545Met
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2222
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35268
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6720
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val545Met
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

17-30349804-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349804
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349804
    reference: chr 17
allele count: 3
allele frequency: 2.556934406109369e-5
allele num: 117328
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1678G>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1393G>T
  hgvsp: ENSP00000443345.2:p.Val465Leu
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1675G>T
  hgvsp: ENSP00000463564.1:p.Val559Leu
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1675G>T
  hgvsp: ENSP00000463081.1:p.Val559Leu
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.496G>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1639G>T
  hgvsp: ENSP00000340519.7:p.Val547Leu
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1720G>T
  hgvsp: ENSP00000332536.7:p.Val574Leu
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1639G>T
  hgvsp: ENSP00000378202.3:p.Val547Leu
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11504
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2220
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1651
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val547Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

17-30349808-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349808
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349808
    reference: chr 17
allele count: 1
allele frequency: 8.530676312018017e-6
allele num: 117224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1643C>T
  hgvsp: ENSP00000378202.3:p.Pro548Leu
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1682C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1397C>T
  hgvsp: ENSP00000443345.2:p.Pro466Leu
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1679C>T
  hgvsp: ENSP00000463564.1:p.Pro560Leu
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.500C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1643C>T
  hgvsp: ENSP00000340519.7:p.Pro548Leu
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1724C>T
  hgvsp: ENSP00000332536.7:p.Pro575Leu
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1679C>T
  hgvsp: ENSP00000463081.1:p.Pro560Leu
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 11493
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6705
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro548Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS

http://identifiers.org/exac.variant/17-30349813-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349813
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349813
    reference: chr 17
allele count: 6
allele frequency: 5.121901249743905e-5
allele num: 117144
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1684C>A
  hgvsp: ENSP00000463564.1:p.Pro562Thr
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1648C>A
  hgvsp: ENSP00000378202.3:p.Pro550Thr
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1402C>A
  hgvsp: ENSP00000443345.2:p.Pro468Thr
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1729C>A
  hgvsp: ENSP00000332536.7:p.Pro577Thr
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1684C>A
  hgvsp: ENSP00000463081.1:p.Pro562Thr
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1687C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.505C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1648C>A
  hgvsp: ENSP00000340519.7:p.Pro550Thr
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2394
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro550Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/17-30349815-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349815
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349815
    reference: chr 17
allele count: 67
allele frequency: 5.721507745384365e-4
allele num: 117102
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1731C>A
  hgvsp: ENST00000327564.7:c.1731C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1686C>A
  hgvsp: ENST00000584368.1:c.1686C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1650C>A
  hgvsp: ENST00000394713.3:c.1650C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1686C>A
  hgvsp: ENST00000578674.1:c.1686C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1404C>A
  hgvsp: ENST00000543378.2:c.1404C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1689C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1650C>A
  hgvsp: ENST00000341671.7:c.1650C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.507C>A
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 34800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 4533
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11453
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6677
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6455
  bin: 9.75e1
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 2212
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1800
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro550Pro
num of homozygotes: 3
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: QD

17-30349815-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349815
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349815
    reference: chr 17
allele count: 1
allele frequency: 8.539563799081142e-6
allele num: 117102
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1731C>G
  hgvsp: ENST00000327564.7:c.1731C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.507C>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1650C>G
  hgvsp: ENST00000341671.7:c.1650C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1686C>G
  hgvsp: ENST00000584368.1:c.1686C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1686C>G
  hgvsp: ENST00000578674.1:c.1686C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1404C>G
  hgvsp: ENST00000543378.2:c.1404C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1689C>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1650C>G
  hgvsp: ENST00000394713.3:c.1650C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11453
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4533
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2390
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro550Pro
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

17-30349815-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349815
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349815
    reference: chr 17
allele count: 12
allele frequency: 1.024747655889737e-4
allele num: 117102
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.507C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1731C>T
  hgvsp: ENST00000327564.7:c.1731C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1686C>T
  hgvsp: ENST00000584368.1:c.1686C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1689C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1650C>T
  hgvsp: ENST00000394713.3:c.1650C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1686C>T
  hgvsp: ENST00000578674.1:c.1686C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1650C>T
  hgvsp: ENST00000341671.7:c.1650C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1404C>T
  hgvsp: ENST00000543378.2:c.1404C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11453
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4533
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35024
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1800
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6455
  bin: 9.75e1
  variant carriers: 12
hgvs: p.Pro550Pro
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

17-30349816-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349816
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349816
    reference: chr 17
allele count: 5
allele frequency: 4.270511265608719e-5
allele num: 117082
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1405G>A
  hgvsp: ENSP00000443345.2:p.Asp469Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.508G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1687G>A
  hgvsp: ENSP00000463564.1:p.Asp563Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1651G>A
  hgvsp: ENSP00000378202.3:p.Asp551Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1732G>A
  hgvsp: ENSP00000332536.7:p.Asp578Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1651G>A
  hgvsp: ENSP00000340519.7:p.Asp551Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1687G>A
  hgvsp: ENSP00000463081.1:p.Asp563Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1690G>A
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11468
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34786
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2392
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp551Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-30349818-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349818
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349818
    reference: chr 17
allele count: 6
allele frequency: 5.127241031600895e-5
allele num: 117022
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.510C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1407C>T
  hgvsp: ENST00000543378.2:c.1407C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1689C>T
  hgvsp: ENST00000578674.1:c.1689C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1689C>T
  hgvsp: ENST00000584368.1:c.1689C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1653C>T
  hgvsp: ENST00000394713.3:c.1653C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1692C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1734C>T
  hgvsp: ENST00000327564.7:c.1734C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1653C>T
  hgvsp: ENST00000341671.7:c.1653C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4541
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11453
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34749
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6680
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34993
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3024
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp551Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

17-30349832-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349832
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349832
    reference: chr 17
allele count: 1
allele frequency: 8.580155815629612e-6
allele num: 116548
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1703T>A
  hgvsp: ENSP00000463564.1:p.Ile568Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1703T>A
  hgvsp: ENSP00000463081.1:p.Ile568Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1421T>A
  hgvsp: ENSP00000443345.2:p.Ile474Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.524T>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1667T>A
  hgvsp: ENSP00000378202.3:p.Ile556Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1748T>A
  hgvsp: ENSP00000332536.7:p.Ile583Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1667T>A
  hgvsp: ENSP00000340519.7:p.Ile556Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1706T>A
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34497
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4529
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1622
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2208
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6652
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ile556Asn
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

17-30349833-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349833
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349833
    reference: chr 17
allele count: 1
allele frequency: 8.591803419537761e-6
allele num: 116390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1749C>G
  hgvsp: ENSP00000332536.7:p.Ile583Met
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1668C>G
  hgvsp: ENSP00000378202.3:p.Ile556Met
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1422C>G
  hgvsp: ENSP00000443345.2:p.Ile474Met
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1704C>G
  hgvsp: ENSP00000463564.1:p.Ile568Met
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1668C>G
  hgvsp: ENSP00000340519.7:p.Ile556Met
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1704C>G
  hgvsp: ENSP00000463081.1:p.Ile568Met
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.525C>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1707C>G
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11324
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6430
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile556Met
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

17-30349833-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349833
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349833
    reference: chr 17
allele count: 1
allele frequency: 8.591803419537761e-6
allele num: 116390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1749C>T
  hgvsp: ENST00000327564.7:c.1749C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1707C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1668C>T
  hgvsp: ENST00000394713.3:c.1668C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1422C>T
  hgvsp: ENST00000543378.2:c.1422C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1704C>T
  hgvsp: ENST00000584368.1:c.1704C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1704C>T
  hgvsp: ENST00000578674.1:c.1704C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1668C>T
  hgvsp: ENST00000341671.7:c.1668C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.525C>T
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11324
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34432
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile556Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

17-30349843-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349843
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349843
    reference: chr 17
allele count: 1
allele frequency: 8.620392400262059e-6
allele num: 116004
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1759T>C
  hgvsp: ENST00000327564.7:c.1759T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1714T>C
  hgvsp: ENST00000584368.1:c.1714T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1717T>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1678T>C
  hgvsp: ENST00000394713.3:c.1678T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1678T>C
  hgvsp: ENST00000341671.7:c.1678T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1714T>C
  hgvsp: ENST00000578674.1:c.1714T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1432T>C
  hgvsp: ENST00000543378.2:c.1432T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.535T>C
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6612
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 3.25e1
  variant carriers: 0
hgvs: c.1678T>C
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

17-30349865-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349865
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349865
    reference: chr 17
allele count: 1
allele frequency: 8.705947903607744e-6
allele num: 114864
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1679+21A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1433+21A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1679+21A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1715+21A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.536+21A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1715+21A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1760+21A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1718+21A>G
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33300
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4344
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10563
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32728
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 944
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6430
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

17-30349868-ATCC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349868
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349865
    reference: chr 17
allele count: 5
allele frequency: 4.356691006047087e-5
allele num: 114766
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1679+27_1679+29delCTC
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1715+27_1715+29delCTC
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1718+27_1718+29delCTC
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1715+27_1715+29delCTC
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1679+27_1679+29delCTC
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.536+27_536+29delCTC
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1433+27_1433+29delCTC
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1760+27_1760+29delCTC
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6352
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: ATCC
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum

17-30349871-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349871
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349871
    reference: chr 17
allele count: 1
allele frequency: 8.720524626761546e-6
allele num: 114672
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1715+27C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1715+27C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.536+27C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1718+27C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1433+27C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1679+27C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1760+27C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1679+27C>T
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32942
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1613
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 944
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32078
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6428
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2339
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

17-30349874-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349874
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349874
    reference: chr 17
allele count: 8
allele frequency: 6.984947438270527e-5
allele num: 114532
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1718+30T>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1679+30T>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1760+30T>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.536+30T>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1715+30T>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1433+30T>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1715+30T>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1679+30T>G
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4260
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10096
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6327
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 817
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/17-30349883-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349883
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349883
    reference: chr 17
allele count: 1
allele frequency: 8.767930417704205e-6
allele num: 114052
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1715+39C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1433+39C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.536+39C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1679+39C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1718+39C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1715+39C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1679+39C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1760+39C>A
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4195
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9568
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1448
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2973
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1114
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

17-30349889-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30349889
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30349889
    reference: chr 17
allele count: 1
allele frequency: 8.777011252128426e-6
allele num: 113934
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1760+45A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1679+45A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1715+45A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1718+45A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1679+45A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.536+45A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1433+45A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1715+45A>G
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32391
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9405
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2206
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1114
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 918
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/17-30351684-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351684
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351684
    reference: chr 17
allele count: 1
allele frequency: 8.256411103221652e-6
allele num: 121118
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1434-46A>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1716-46A>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1761-46A>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1680-46A>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1716-46A>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.537-46A>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1719-46A>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1680-46A>C
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4843
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2208
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4330
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7669
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12999
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3209
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3510
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

17-30351691-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351691
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351691
    reference: chr 17
allele count: 5
allele frequency: 4.131275407343755e-5
allele num: 121028
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1761-39G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1680-39G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1716-39G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.537-39G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1680-39G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1434-39G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1716-39G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1719-39G>A
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10858
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3470
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

17-30351691-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351691
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351691
    reference: chr 17
allele count: 2
allele frequency: 1.652510162937502e-5
allele num: 121028
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1719-39G>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1716-39G>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.537-39G>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1716-39G>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1680-39G>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1434-39G>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1680-39G>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1761-39G>T
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 7658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12420
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10858
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11324
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30957
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

17-30351692-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351692
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351692
    reference: chr 17
allele count: 202
allele frequency: 1.670249710600298e-3
allele num: 120940
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1716-38C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1716-38C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1719-38C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.537-38C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1434-38C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1680-38C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1761-38C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1680-38C>T
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 6.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 7630
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4739
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 8.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 9.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12414
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 13026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 5.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 10839
  bin: 3.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 3435
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3165
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 3
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

17-30351693-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351693
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351693
    reference: chr 17
allele count: 9
allele frequency: 7.440845280023811e-5
allele num: 120954
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1680-37G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1680-37G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.537-37G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1716-37G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1716-37G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1761-37G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1434-37G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1719-37G>A
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12447
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13104
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7656
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10863
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3448
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31072
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

17-30351693-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351693
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351693
    reference: chr 17
allele count: 2
allele frequency: 1.653521173338625e-5
allele num: 120954
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1761-37G>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1716-37G>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.537-37G>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1716-37G>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1680-37G>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1680-37G>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1434-37G>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1719-37G>C
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13104
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10863
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12447
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7656
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3170
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6980
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

17-30351694-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351694
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351694
    reference: chr 17
allele count: 1
allele frequency: 8.271298593879239e-6
allele num: 120900
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.537-36T>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1716-36T>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1680-36T>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1434-36T>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1716-36T>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1761-36T>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1680-36T>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1719-36T>C
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13105
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7625
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10848
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6968
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1838
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

17-30351697-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351697
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351697
    reference: chr 17
allele count: 1
allele frequency: 8.272530236098013e-6
allele num: 120882
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1716-33C>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1680-33C>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1434-33C>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1716-33C>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1761-33C>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.537-33C>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1680-33C>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1719-33C>G
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7614
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4828
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4253
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3424
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1838
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum

http://identifiers.org/exac.variant/17-30351709-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351709
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351709
    reference: chr 17
allele count: 1
allele frequency: 8.275405494869249e-6
allele num: 120840
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1716-21A>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1761-21A>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1719-21A>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1434-21A>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1716-21A>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.537-21A>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1680-21A>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1680-21A>C
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10800
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5012
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31179
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

17-30351713-ACTGT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351713
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351709
    reference: chr 17
allele count: 3
allele frequency: 2.482416218452627e-5
allele num: 120850
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1680-14_1680-11delGTCT
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.537-14_537-11delGTCT
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1434-14_1434-11delGTCT
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1719-14_1719-11delGTCT
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1716-14_1716-11delGTCT
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1716-14_1716-11delGTCT
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1680-14_1680-11delGTCT
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1761-14_1761-11delGTCT
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4234
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12336
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3151
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11244
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3422
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6963
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: ACTGT
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

17-30351716-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351716
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351716
    reference: chr 17
allele count: 5
allele frequency: 4.139141376512856e-5
allele num: 120798
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1680-14G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1761-14G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1719-14G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1680-14G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1716-14G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.537-14G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1716-14G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1434-14G>A
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7575
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3135
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31434
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1834
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/17-30351718-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351718
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351718
    reference: chr 17
allele count: 8
allele frequency: 6.622735852180536e-5
allele num: 120796
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.537-12C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1434-12C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1716-12C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1680-12C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1716-12C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1680-12C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1761-12C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1719-12C>A
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7571
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4235
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1833
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11205
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

17-30351725-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351725
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351725
    reference: chr 17
allele count: 1832
allele frequency: 1.515026215246192e-2
allele num: 120922
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1434-5T>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1761-5T>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1716-5T>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.537-5T>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1719-5T>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1680-5T>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1716-5T>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1680-5T>C
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13524
  bin: 2.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 7486
  bin: 4.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 4188
  bin: 4.75e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 9.75e1
  variant carriers: 749
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 5.75e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.75e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 5.25e1
  variant carriers: 86
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 6.25e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 10678
  bin: 3.75e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 12139
  bin: 3.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.25e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.75e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 5340
  bin: 2.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 31834
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 7392
  bin: 9.75e1
  variant carriers: 1702
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1783
  bin: 8.25e1
  variant carriers: 4
hgvs: c.1680-5T>C
num of homozygotes: 99
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

17-30351726-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351726
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351726
    reference: chr 17
allele count: 1
allele frequency: 8.269656974628692e-6
allele num: 120924
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.537-4G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1761-4G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1434-4G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1719-4G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1716-4G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1680-4G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1716-4G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1680-4G>A
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12408
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10876
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3472
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1680-4G>A
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-30351738-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351738
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351738
    reference: chr 17
allele count: 1
allele frequency: 8.262277744728666e-6
allele num: 121032
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1688A>G
  hgvsp: ENSP00000378202.3:p.Gln563Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1724A>G
  hgvsp: ENSP00000463564.1:p.Gln575Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1769A>G
  hgvsp: ENSP00000332536.7:p.Gln590Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1442A>G
  hgvsp: ENSP00000443345.2:p.Gln481Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.545A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1724A>G
  hgvsp: ENSP00000463081.1:p.Gln575Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1688A>G
  hgvsp: ENSP00000340519.7:p.Gln563Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1727A>G
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12414
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32903
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln563Arg
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/17-30351742-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351742
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351742
    reference: chr 17
allele count: 1
allele frequency: 8.261185645363822e-6
allele num: 121048
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1773A>C
  hgvsp: ENST00000327564.7:c.1773A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1692A>C
  hgvsp: ENST00000341671.7:c.1692A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1446A>C
  hgvsp: ENST00000543378.2:c.1446A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1692A>C
  hgvsp: ENST00000394713.3:c.1692A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1728A>C
  hgvsp: ENST00000578674.1:c.1728A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1731A>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1728A>C
  hgvsp: ENST00000584368.1:c.1728A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.549A>C
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13840
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32936
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5950
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1848
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3227
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly564Gly
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

17-30351748-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351748
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351748
    reference: chr 17
allele count: 5
allele frequency: 4.129296533042631e-5
allele num: 121086
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1734T>C
  hgvsp: ENST00000584368.1:c.1734T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1737T>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.555T>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1734T>C
  hgvsp: ENST00000578674.1:c.1734T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1779T>C
  hgvsp: ENST00000327564.7:c.1779T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1698T>C
  hgvsp: ENST00000341671.7:c.1698T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1452T>C
  hgvsp: ENST00000543378.2:c.1452T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1698T>C
  hgvsp: ENST00000394713.3:c.1698T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5672
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13851
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10880
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Tyr566Tyr
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/17-30351758-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351758
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351758
    reference: chr 17
allele count: 727
allele frequency: 6.056011862119521e-3
allele num: 120046
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1744C>A
  hgvsp: ENSP00000463081.1:p.Leu582Ile
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1708C>A
  hgvsp: ENSP00000378202.3:p.Leu570Ile
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1462C>A
  hgvsp: ENSP00000443345.2:p.Leu488Ile
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.565C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1708C>A
  hgvsp: ENSP00000340519.7:p.Leu570Ile
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1789C>A
  hgvsp: ENSP00000332536.7:p.Leu597Ile
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000580871
  gene symbol: LRRC37B
  hgvsc: ENST00000580871.1:n.5C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000582815
  gene symbol: LRRC37B
  hgvsc: ENST00000582815.1:n.4C>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1744C>A
  hgvsp: ENSP00000463564.1:p.Leu582Ile
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1747C>A
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 13694
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 12290
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 10802
  bin: 3.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 9.75e1
  variant carriers: 336
genotype depth: GenotypeDepth
  all individuals: 4287
  bin: 4.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 5.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 5503
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 6.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 7615
  bin: 4.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 5.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.25e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 3195
  bin: 7.25e1
  variant carriers: 17
hgvs: p.Leu570Ile
num of homozygotes: 23
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/17-30351762-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351762
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351762
    reference: chr 17
allele count: 2
allele frequency: 1.652237129072764e-5
allele num: 121048
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1751A>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1466A>C
  hgvsp: ENSP00000443345.2:p.Asp489Ala
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1748A>C
  hgvsp: ENSP00000463081.1:p.Asp583Ala
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1793A>C
  hgvsp: ENSP00000332536.7:p.Asp598Ala
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.569A>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1748A>C
  hgvsp: ENSP00000463564.1:p.Asp583Ala
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1712A>C
  hgvsp: ENSP00000340519.7:p.Asp571Ala
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000580871
  gene symbol: LRRC37B
  hgvsc: ENST00000580871.1:n.9A>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1712A>C
  hgvsp: ENSP00000378202.3:p.Asp571Ala
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000582815
  gene symbol: LRRC37B
  hgvsc: ENST00000582815.1:n.8A>C
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7552
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10915
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp571Ala
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

17-30351777-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351777
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351777
    reference: chr 17
allele count: 1
allele frequency: 8.263097008758882e-6
allele num: 121020
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1808A>G
  hgvsp: ENSP00000332536.7:p.Lys603Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1727A>G
  hgvsp: ENSP00000340519.7:p.Lys576Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1766A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000582815
  gene symbol: LRRC37B
  hgvsc: ENST00000582815.1:n.23A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1763A>G
  hgvsp: ENSP00000463081.1:p.Lys588Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1763A>G
  hgvsp: ENSP00000463564.1:p.Lys588Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.584A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000580871
  gene symbol: LRRC37B
  hgvsc: ENST00000580871.1:n.24A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1481A>G
  hgvsp: ENSP00000443345.2:p.Lys494Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1727A>G
  hgvsp: ENSP00000378202.3:p.Lys576Arg
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7552
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12746
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3226
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Lys576Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

17-30351781-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351781
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351781
    reference: chr 17
allele count: 1
allele frequency: 8.267059076404159e-6
allele num: 120962
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.588A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1812A>G
  hgvsp: ENST00000327564.7:c.1812A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1767A>G
  hgvsp: ENST00000578674.1:c.1767A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000580871
  gene symbol: LRRC37B
  hgvsc: ENST00000580871.1:n.28A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1767A>G
  hgvsp: ENST00000584368.1:c.1767A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1731A>G
  hgvsp: ENST00000394713.3:c.1731A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1485A>G
  hgvsp: ENST00000543378.2:c.1485A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1731A>G
  hgvsp: ENST00000341671.7:c.1731A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000582815
  gene symbol: LRRC37B
  hgvsc: ENST00000582815.1:n.27A>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1770A>G
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12729
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4212
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala577Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum

17-30351784-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351784
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351784
    reference: chr 17
allele count: 1
allele frequency: 8.276775368316504e-6
allele num: 120820
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1734C>T
  hgvsp: ENST00000394713.3:c.1734C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000582815
  gene symbol: LRRC37B
  hgvsc: ENST00000582815.1:n.30C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.591C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1770C>T
  hgvsp: ENST00000584368.1:c.1770C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1734C>T
  hgvsp: ENST00000341671.7:c.1734C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1815C>T
  hgvsp: ENST00000327564.7:c.1815C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1488C>T
  hgvsp: ENST00000543378.2:c.1488C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1770C>T
  hgvsp: ENST00000578674.1:c.1770C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1773C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000580871
  gene symbol: LRRC37B
  hgvsc: ENST00000580871.1:n.31C>T
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12729
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7556
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3442
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Tyr578Tyr
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD

17-30351788-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351788
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351788
    reference: chr 17
allele count: 1
allele frequency: 8.287888080359362e-6
allele num: 120658
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1738T>C
  hgvsp: ENSP00000340519.7:p.Trp580Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1492T>C
  hgvsp: ENSP00000443345.2:p.Trp498Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000580871
  gene symbol: LRRC37B
  hgvsc: ENST00000580871.1:n.35T>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1819T>C
  hgvsp: ENSP00000332536.7:p.Trp607Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1777T>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1738T>C
  hgvsp: ENSP00000378202.3:p.Trp580Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.595T>C
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1774T>C
  hgvsp: ENSP00000463081.1:p.Trp592Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1774T>C
  hgvsp: ENSP00000463564.1:p.Trp592Arg
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000582815
  gene symbol: LRRC37B
  hgvsc: ENST00000582815.1:n.34T>C
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12743
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10925
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Trp580Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-30351794-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351794
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351794
    reference: chr 17
allele count: 8
allele frequency: 6.742292716638293e-5
allele num: 118654
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000580871
  gene symbol: LRRC37B
  hgvsc: ENST00000580871.1:n.41G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1744G>A
  hgvsp: ENSP00000378202.3:p.Glu582Lys
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1825G>A
  hgvsp: ENSP00000332536.7:p.Glu609Lys
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000582815
  gene symbol: LRRC37B
  hgvsc: ENST00000582815.1:n.40G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1783G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1780G>A
  hgvsp: ENSP00000463564.1:p.Glu594Lys
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1780G>A
  hgvsp: ENSP00000463081.1:p.Glu594Lys
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.601G>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1744G>A
  hgvsp: ENSP00000340519.7:p.Glu582Lys
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1498G>A
  hgvsp: ENSP00000443345.2:p.Glu500Lys
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 13645
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7521
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4204
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4995
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu582Lys
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

17-30351799-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351799
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351799
    reference: chr 17
allele count: 3
allele frequency: 2.532457665749354e-5
allele num: 118462
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000582815
  gene symbol: LRRC37B
  hgvsc: ENST00000582815.1:n.45A>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1785A>T
  hgvsp: ENSP00000463564.1:p.Lys595Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.606A>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1785A>T
  hgvsp: ENSP00000463081.1:p.Lys595Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1749A>T
  hgvsp: ENSP00000340519.7:p.Lys583Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000580871
  gene symbol: LRRC37B
  hgvsc: ENST00000580871.1:n.46A>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1749A>T
  hgvsp: ENSP00000378202.3:p.Lys583Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1788A>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1830A>T
  hgvsp: ENSP00000332536.7:p.Lys610Asn
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1503A>T
  hgvsp: ENSP00000443345.2:p.Lys501Asn
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12369
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13534
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7508
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Lys583Asn
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

17-30351811-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351811
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351811
    reference: chr 17
allele count: 1
allele frequency: 8.608222574202878e-6
allele num: 116168
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1790+10T>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000582815
  gene symbol: LRRC37B
  hgvsc: ENST00000582815.1:n.47+10T>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1751+10T>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1505+10T>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000580871
  gene symbol: LRRC37B
  hgvsc: ENST00000580871.1:n.48+10T>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1787+10T>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.608+10T>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1787+10T>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1832+10T>A
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1751+10T>A
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11089
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4179
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3351
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

17-30351816-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351816
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351816
    reference: chr 17
allele count: 1
allele frequency: 8.781790080089925e-6
allele num: 113872
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1505+15T>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000580871
  gene symbol: LRRC37B
  hgvsc: ENST00000580871.1:n.48+15T>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1832+15T>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1751+15T>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000582815
  gene symbol: LRRC37B
  hgvsc: ENST00000582815.1:n.47+15T>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1787+15T>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1751+15T>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1790+15T>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1787+15T>G
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.608+15T>G
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9100
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5391
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6846
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8906
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11053
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2847
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

17-30351817-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351817
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351817
    reference: chr 17
allele count: 9
allele frequency: 7.984527759541511e-5
allele num: 112718
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000378202
  ensembl transcript: ENST00000394713
  gene symbol: LRRC37B
  hgvsc: ENST00000394713.3:c.1751+16C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000443345
  ensembl transcript: ENST00000543378
  gene symbol: LRRC37B
  hgvsc: ENST00000543378.2:c.1505+16C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463081
  ensembl transcript: ENST00000584368
  gene symbol: LRRC37B
  hgvsc: ENST00000584368.1:c.1787+16C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000581786
  gene symbol: LRRC37B
  hgvsc: ENST00000581786.1:n.608+16C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000340519
  ensembl transcript: ENST00000341671
  gene symbol: LRRC37B
  hgvsc: ENST00000341671.7:c.1751+16C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1790+16C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000463564
  ensembl transcript: ENST00000578674
  gene symbol: LRRC37B
  hgvsc: ENST00000578674.1:c.1787+16C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000580871
  gene symbol: LRRC37B
  hgvsc: ENST00000580871.1:n.48+16C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000582815
  gene symbol: LRRC37B
  hgvsc: ENST00000582815.1:n.47+16C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1832+16C>T
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7899
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3737
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7820
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4648
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2531
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

17-30351818-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30351818
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 30351818
    reference: chr 17
allele count: 1
allele frequency: 9.008197459688316e-6
allele num: 111010
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl transcript: ENST00000583204
  gene symbol: LRRC37B
  hgvsc: ENST00000583204.1:n.1790+17C>T
  variant of: http://identifiers.org/hgnc/29070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185158
  ensembl protein: ENSP00000332536
  ensembl transcript: ENST00000327564
  gene symbol: LRRC37B
  hgvsc: ENST00000327564.7:c.1832+17C>T
  variant of: http://identifiers.org/hgnc/29070
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 1112
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2459
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6909
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1028
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2235
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513134003147319e-5
allele num: 66088
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9928
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

MQ
type: SiteQuality
SIO_000300: 2.898e1

DP
type: SiteQuality
SIO_000300: 1.626715e6

VQSLOD
type: SiteQuality
SIO_000300: -4.742e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.105e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

FS
type: SiteQuality
SIO_000300: 5.102e0

QD
type: SiteQuality
SIO_000300: 5.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.17e-1

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3096
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2234
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5669
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1111
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2457
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51308821304282e-5
allele num: 66090
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9926
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 2.819e1

MQRankSum
type: SiteQuality
SIO_000300: -3.057e0

FS
type: SiteQuality
SIO_000300: 2.90002e2

VQSLOD
type: SiteQuality
SIO_000300: -3.871e2

QD
type: SiteQuality
SIO_000300: 3.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.026e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.41e-1

DP
type: SiteQuality
SIO_000300: 1.627017e6

GenotypeQuality
all individuals: 109
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6888
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3091
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5676
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1164
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2236
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36362
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65804
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.025430680885972e-4
allele num: 9752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

DP
type: SiteQuality
SIO_000300: 1.620707e6

VQSLOD
type: SiteQuality
SIO_000300: -5.261e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.51e0

MQ
type: SiteQuality
SIO_000300: 2.763e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e-1

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

FS
type: SiteQuality
SIO_000300: 2.422e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5677
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 36209
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6881
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2458
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1111
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2238
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.572752492150108e-5
allele num: 65606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.522e0

QD
type: SiteQuality
SIO_000300: 1.239e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

FS
type: SiteQuality
SIO_000300: 8.823e0

DP
type: SiteQuality
SIO_000300: 1.619323e6

MQ
type: SiteQuality
SIO_000300: 2.789e1

MQRankSum
type: SiteQuality
SIO_000300: -1.224e0

GenotypeQuality
all individuals: 36227
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6881
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1123
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5677
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 958
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3096
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2238
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52452968259292e-5
allele num: 65594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.495e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.61e-1

MQ
type: SiteQuality
SIO_000300: 2.78e1

VQSLOD
type: SiteQuality
SIO_000300: -5.715e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.743e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

FS
type: SiteQuality
SIO_000300: 5.898e0

QD
type: SiteQuality
SIO_000300: 6.76e0

DP
type: SiteQuality
SIO_000300: 1.619012e6

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 275
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6035
bin: 9.75e1
variant carriers: 408

GenotypeQuality
all individuals: 1111
bin: 9.25e1
variant carriers: 4

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2440
bin: 7.25e1
variant carriers: 2

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3075
bin: 7.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 36007
bin: 6.25e1
variant carriers: 2

Other
type: Population
allele count: 2
allele frequency: 2.222222222222222e-3
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 394
allele frequency: 4.084594650632387e-2
allele num: 9646
num of homozygotes: 8

Latino
type: Population
allele count: 21
allele frequency: 1.814098134070491e-3
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.372704532975413e-4
allele num: 65564
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.641838e6

MQ
type: SiteQuality
SIO_000300: 2.932e1

FS
type: SiteQuality
SIO_000300: 5.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

QD
type: SiteQuality
SIO_000300: 1.177e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.15e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.182e0

GenotypeQuality
all individuals: 68
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6856
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variant carriers: 1

GenotypeQuality
all individuals: 98
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
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GenotypeQuality
all individuals: 82
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2441
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3077
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6002
bin: 9.75e1
variant carriers: 76

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.455425017277125e-4
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65482
num of homozygotes: 0

African
type: Population
allele count: 72
allele frequency: 7.496876301541024e-3
allele num: 9604
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.17e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.77e0

MQRankSum
type: SiteQuality
SIO_000300: -1.39e-1

DP
type: SiteQuality
SIO_000300: 1.63538e6

VQSLOD
type: SiteQuality
SIO_000300: -3.068e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.71e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 3.069e1

QD
type: SiteQuality
SIO_000300: 1.224e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.02e-1

GenotypeQuality
all individuals: 95
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3081
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 20
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2442
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variant carriers: 0

GenotypeQuality
all individuals: 5989
bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.064570500444363e-5
allele num: 65262
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

MQ
type: SiteQuality
SIO_000300: 3.128e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.639999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.121e1

DP
type: SiteQuality
SIO_000300: 1.632057e6

FS
type: SiteQuality
SIO_000300: 3.079e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.841e0

VQSLOD
type: SiteQuality
SIO_000300: -4.426e0

GenotypeQuality
all individuals: 6867
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3084
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2232
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535720867375146e-5
allele num: 65116
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.314279102059708e-4
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

DP
type: SiteQuality
SIO_000300: 1.632006e6

FS
type: SiteQuality
SIO_000300: 1.103e0

VQSLOD
type: SiteQuality
SIO_000300: -3.085e0

QD
type: SiteQuality
SIO_000300: 1.129e1

MQ
type: SiteQuality
SIO_000300: 3.509e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e-1

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3084
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2232
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 959
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variant carriers: 0

GenotypeQuality
all individuals: 131
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variant carriers: 0

GenotypeQuality
all individuals: 16
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 81
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variant carriers: 0

GenotypeQuality
all individuals: 1118
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variant carriers: 0

GenotypeQuality
all individuals: 2440
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65116
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817080557238038e-4
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.632471e6

QD
type: SiteQuality
SIO_000300: 1.168e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-2

FS
type: SiteQuality
SIO_000300: 5.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.533e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 3.544e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.73e-1

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1203
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3087
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2445
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5996
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variant carriers: 1

GenotypeQuality
all individuals: 201
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variant carriers: 0

GenotypeQuality
all individuals: 36313
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variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 959
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variant carriers: 0

GenotypeQuality
all individuals: 6871
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variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535815210713847e-5
allele num: 65112
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.878e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

FS
type: SiteQuality
SIO_000300: 3.912e0

DP
type: SiteQuality
SIO_000300: 1.635727e6

MQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

MQ
type: SiteQuality
SIO_000300: 3.767e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.665e0

QD
type: SiteQuality
SIO_000300: 1.05e1

GenotypeQuality
all individuals: 36325
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 40
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 1119
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2447
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65116
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9696
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.971e1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 1.226e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.029e0

VQSLOD
type: SiteQuality
SIO_000300: -2.608e0

QD
type: SiteQuality
SIO_000300: 1.361e1

DP
type: SiteQuality
SIO_000300: 1.635953e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.37e-1

GenotypeQuality
all individuals: 6864
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1219
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 36358
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GenotypeQuality
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GenotypeQuality
all individuals: 1119
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 42
bin: 3.25e1
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GenotypeQuality
all individuals: 2240
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.02880658436214e-4
allele num: 9720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535909565644775e-5
allele num: 65108
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.881e0

QD
type: SiteQuality
SIO_000300: 1.223e1

VQSLOD
type: SiteQuality
SIO_000300: -2.49e0

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 3.724e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.124e0

FS
type: SiteQuality
SIO_000300: 2.716e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.636284e6

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 49
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GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 36126
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GenotypeQuality
all individuals: 6807
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GenotypeQuality
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GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 1245
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GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 952
bin: 8.75e1
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GenotypeQuality
all individuals: 6393
bin: 9.75e1
variant carriers: 432

Other
type: Population
allele count: 3
allele frequency: 3.333333333333334e-3
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 10
allele frequency: 1.511944360447536e-3
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 331
allele frequency: 5.083236071011733e-3
allele num: 65116
num of homozygotes: 0

Latino
type: Population
allele count: 76
allele frequency: 6.567576909782233e-3
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.234821979831241e-3
allele num: 9718
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.791e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.682063e6

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.12e-1

MQ
type: SiteQuality
SIO_000300: 3.942e1

QD
type: SiteQuality
SIO_000300: 1.22e1

GenotypeQuality
all individuals: 6798
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2222
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variant carriers: 0

GenotypeQuality
all individuals: 1119
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535626535626536e-5
allele num: 65120
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.88e-1

DP
type: SiteQuality
SIO_000300: 1.651818e6

QD
type: SiteQuality
SIO_000300: 8.08e0

VQSLOD
type: SiteQuality
SIO_000300: -2.445e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.24e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.52e-1

FS
type: SiteQuality
SIO_000300: 2.364e0

MQ
type: SiteQuality
SIO_000300: 3.997e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e0

GenotypeQuality
all individuals: 206
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2222
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 951
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variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535579374097847e-5
allele num: 65122
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9732
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158748551564311e-4
allele num: 8630
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.997e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.55e0

FS
type: SiteQuality
SIO_000300: 2.1396e1

QD
type: SiteQuality
SIO_000300: 1.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.628e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-1

MQ
type: SiteQuality
SIO_000300: 4.001e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

DP
type: SiteQuality
SIO_000300: 1.652385e6

GenotypeQuality
all individuals: 918
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 693
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variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6383
bin: 9.75e1
variant carriers: 35

European (Non-Finnish)
type: Population
allele count: 34
allele frequency: 5.257623554153522e-4
allele num: 64668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.047120418848168e-4
allele num: 9550
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.652e0

MQ
type: SiteQuality
SIO_000300: 3.832e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.27e-1

QD
type: SiteQuality
SIO_000300: 1.12e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.647307e6

MQRankSum
type: SiteQuality
SIO_000300: -9.1e-2

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
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GenotypeQuality
all individuals: 2410
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 52
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variant carriers: 0

GenotypeQuality
all individuals: 76
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.54669471339747e-5
allele num: 64654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.87e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

MQ
type: SiteQuality
SIO_000300: 4.484e1

DP
type: SiteQuality
SIO_000300: 1.645389e6

VQSLOD
type: SiteQuality
SIO_000300: -1.923e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.389999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.208e1

MQRankSum
type: SiteQuality
SIO_000300: 9.06e-1

GenotypeQuality
all individuals: 35680
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
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variant carriers: 0

GenotypeQuality
all individuals: 53
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variant carriers: 0

GenotypeQuality
all individuals: 759
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2408
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6764
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.098661378284581e-5
allele num: 64544
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.861e0

QD
type: SiteQuality
SIO_000300: 9.92e0

MQ
type: SiteQuality
SIO_000300: 3.904e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

FS
type: SiteQuality
SIO_000300: 1.106e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.34e0

DP
type: SiteQuality
SIO_000300: 1.643807e6

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.27e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 950
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variant carriers: 0

GenotypeQuality
all individuals: 35680
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.73190162798753e-4
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.23e-1

MQ
type: SiteQuality
SIO_000300: 3.904e1

VQSLOD
type: SiteQuality
SIO_000300: -2.861e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.34e0

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-2

FS
type: SiteQuality
SIO_000300: 1.106e0

QD
type: SiteQuality
SIO_000300: 9.92e0

DP
type: SiteQuality
SIO_000300: 1.643807e6

GenotypeQuality
all individuals: 74
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64196
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.102e1

MQ
type: SiteQuality
SIO_000300: 3.951e1

MQRankSum
type: SiteQuality
SIO_000300: -1.904e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.703e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.3e-2

FS
type: SiteQuality
SIO_000300: 1.1415e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.528e0

DP
type: SiteQuality
SIO_000300: 1.636851e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.61e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1285
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GenotypeQuality
all individuals: 43
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GenotypeQuality
all individuals: 28
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GenotypeQuality
all individuals: 32
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6730
bin: 6.75e1
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GenotypeQuality
all individuals: 2404
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.559867723217071e-5
allele num: 64108
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.8e0

FS
type: SiteQuality
SIO_000300: 4.586e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.91e-1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 4.074e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.6e0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 731
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GenotypeQuality
all individuals: 90
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GenotypeQuality
all individuals: 30
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GenotypeQuality
all individuals: 6719
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GenotypeQuality
all individuals: 2400
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GenotypeQuality
all individuals: 1115
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GenotypeQuality
all individuals: 66
bin: 3.75e1
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GenotypeQuality
all individuals: 85
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.12090381374446e-5
allele num: 64084
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.819505094614265e-4
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.938e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.749e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.639e0

MQRankSum
type: SiteQuality
SIO_000300: -9.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

DP
type: SiteQuality
SIO_000300: 1.637377e6

QD
type: SiteQuality
SIO_000300: 1.085e1

GenotypeQuality
all individuals: 2398
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.339728591483388e-4
allele num: 8548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9310
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64046
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.17e0

DP
type: SiteQuality
SIO_000300: 1.636839e6

QD
type: SiteQuality
SIO_000300: 1.23e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.239e0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.394e0

FS
type: SiteQuality
SIO_000300: 5.982e0

MQ
type: SiteQuality
SIO_000300: 4.211e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 23
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GenotypeQuality
all individuals: 6378
bin: 9.75e1
variant carriers: 3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.819725827975252e-4
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63976
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.09e-1

DP
type: SiteQuality
SIO_000300: 1.636326e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.593e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

QD
type: SiteQuality
SIO_000300: 9.130000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -2.482e0

MQ
type: SiteQuality
SIO_000300: 4.1e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

FS
type: SiteQuality
SIO_000300: 1.105e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.721e0

GenotypeQuality
all individuals: 1693
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1114
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variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9268
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.564455569461827e-5
allele num: 63920
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.22e0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

DP
type: SiteQuality
SIO_000300: 1.635108e6

QD
type: SiteQuality
SIO_000300: 9.57e0

VQSLOD
type: SiteQuality
SIO_000300: -2.716e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 4.114e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 2.965e0

GenotypeQuality
all individuals: 3034
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 19
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GenotypeQuality
all individuals: 1115
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2216
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.679048776254123e-5
allele num: 11522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.827911200175345e-5
allele num: 63874
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.078e0

MQ
type: SiteQuality
SIO_000300: 4.169e1

DP
type: SiteQuality
SIO_000300: 1.635027e6

FS
type: SiteQuality
SIO_000300: 5.26e-1

QD
type: SiteQuality
SIO_000300: 1.005e1

VQSLOD
type: SiteQuality
SIO_000300: -2.46e0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1115
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 2390
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.396435618755285e-5
allele num: 63854
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

South Asian
type: Population
allele count: 57
allele frequency: 3.458318165271205e-3
allele num: 16482
num of homozygotes: 2

Other
type: Population
allele count: 4
allele frequency: 4.484304932735426e-3
allele num: 892
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.81e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.642e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.42e-2

MQ
type: SiteQuality
SIO_000300: 4.24e1

FS
type: SiteQuality
SIO_000300: 5.42e-1

DP
type: SiteQuality
SIO_000300: 1.640072e6

QD
type: SiteQuality
SIO_000300: 1.274e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067224851352991e-5
allele num: 16482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63854
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.81e-1

QD
type: SiteQuality
SIO_000300: 1.274e1

VQSLOD
type: SiteQuality
SIO_000300: -8.642e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.5e0

MQ
type: SiteQuality
SIO_000300: 4.24e1

FS
type: SiteQuality
SIO_000300: 5.42e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.79e-1

DP
type: SiteQuality
SIO_000300: 1.640072e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.42e-2

GenotypeQuality
all individuals: 120
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.252858082500705e-4
allele num: 63854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.426889940541196e-4
allele num: 16482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.24e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.45e-1

FS
type: SiteQuality
SIO_000300: 5.42e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.79e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.642e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.42e-2

DP
type: SiteQuality
SIO_000300: 1.640072e6

QD
type: SiteQuality
SIO_000300: 1.274e1

GenotypeQuality
all individuals: 119
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1116
bin: 9.25e1
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GenotypeQuality
all individuals: 6420
bin: 9.75e1
variant carriers: 5

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.265467873813477e-5
allele num: 63842
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067961165048543e-5
allele num: 16480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.966e0

MQ
type: SiteQuality
SIO_000300: 4.039e1

QD
type: SiteQuality
SIO_000300: 1.76e0

DP
type: SiteQuality
SIO_000300: 1.635677e6

FS
type: SiteQuality
SIO_000300: 1.051e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.93e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.734e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.43e-1

GenotypeQuality
all individuals: 128
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1825
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2212
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2390
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6431
bin: 9.75e1
variant carriers: 6

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.403504372629533e-5
allele num: 63806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9228
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

QD
type: SiteQuality
SIO_000300: 1.033e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.943e0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

FS
type: SiteQuality
SIO_000300: 1.102e0

DP
type: SiteQuality
SIO_000300: 1.635161e6

VQSLOD
type: SiteQuality
SIO_000300: -1.747e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

MQ
type: SiteQuality
SIO_000300: 4.111e1

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34702
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1090
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6429
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3010
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1116
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.574356875216474e-5
allele num: 63518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9116
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.29e0

MQ
type: SiteQuality
SIO_000300: 3.87e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.491e0

FS
type: SiteQuality
SIO_000300: 4.122e0

DP
type: SiteQuality
SIO_000300: 1.627268e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

VQSLOD
type: SiteQuality
SIO_000300: -3.842e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.05e0

QD
type: SiteQuality
SIO_000300: 1.092e1

GenotypeQuality
all individuals: 2379
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1163
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2208
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1518
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6639
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34590
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3009
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1116
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9058
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.576093809103518e-5
allele num: 63448
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.177e0

MQRankSum
type: SiteQuality
SIO_000300: 8.3e-1

QD
type: SiteQuality
SIO_000300: 1.197e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.371e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-2

MQ
type: SiteQuality
SIO_000300: 4.18e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.0e-1

DP
type: SiteQuality
SIO_000300: 1.624795e6

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2208
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6430
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34590
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1163
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3009
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2379
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6639
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1116
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1518
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9058
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.576093809103518e-5
allele num: 63448
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-2

FS
type: SiteQuality
SIO_000300: 3.177e0

DP
type: SiteQuality
SIO_000300: 1.624795e6

QD
type: SiteQuality
SIO_000300: 1.197e1

MQRankSum
type: SiteQuality
SIO_000300: 8.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.41e0

MQ
type: SiteQuality
SIO_000300: 4.18e1

VQSLOD
type: SiteQuality
SIO_000300: -2.371e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.0e-1

GenotypeQuality
all individuals: 3005
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1242
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2373
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34289
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6429
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 46
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1547
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1114
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2210
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.104260774020266e-5
allele num: 16382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8966
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63250
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.97e-1

QD
type: SiteQuality
SIO_000300: 1.357e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.21e-1

MQ
type: SiteQuality
SIO_000300: 4.047e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

FS
type: SiteQuality
SIO_000300: 4.813e0

MQRankSum
type: SiteQuality
SIO_000300: -2.86e-1

DP
type: SiteQuality
SIO_000300: 1.619102e6

VQSLOD
type: SiteQuality
SIO_000300: -2.515e0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2205
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2978
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1618
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1021
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1114
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6381
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62692
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.195786864931847e-5
allele num: 16140
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.500000000000001e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

MQ
type: SiteQuality
SIO_000300: 4.198e1

VQSLOD
type: SiteQuality
SIO_000300: -2.399e0

FS
type: SiteQuality
SIO_000300: 1.548e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.95e-1

QD
type: SiteQuality
SIO_000300: 1.949e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.35e-1

DP
type: SiteQuality
SIO_000300: 1.590084e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.43e0

GenotypeQuality
all individuals: 2204
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32356
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2977
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2338
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1618
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6432
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 944
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8682
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.75963826749167e-4
allele num: 8404
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.201935003721161e-5
allele num: 16124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

MQ
type: SiteQuality
SIO_000300: 4.196e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.32e0

FS
type: SiteQuality
SIO_000300: 6.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

DP
type: SiteQuality
SIO_000300: 1.586208e6

QD
type: SiteQuality
SIO_000300: 1.199e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.64e-1

GenotypeQuality
all individuals: 546
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2203
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1120
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2975
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6342
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.190759704691593e-4
allele num: 8398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16098
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.074e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.652e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

FS
type: SiteQuality
SIO_000300: 9.279999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -3.694e0

MQ
type: SiteQuality
SIO_000300: 3.913e1

DP
type: SiteQuality
SIO_000300: 1.581798e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.18e-1

GenotypeQuality
all individuals: 592
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2336
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31585
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
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GenotypeQuality
all individuals: 188
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2202
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2973
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variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6440
bin: 9.75e1
variant carriers: 8

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.599948801638348e-5
allele num: 62502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.357569721115538e-4
allele num: 16064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.205e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.57e-1

MQ
type: SiteQuality
SIO_000300: 4.037e1

VQSLOD
type: SiteQuality
SIO_000300: -2.647e0

MQRankSum
type: SiteQuality
SIO_000300: 9.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.07e-1

DP
type: SiteQuality
SIO_000300: 1.577288e6

GenotypeQuality
all individuals: 1132
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6264
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2331
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2202
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30399
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6436
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.604930346022983e-5
allele num: 62308
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.56666e6

FS
type: SiteQuality
SIO_000300: 1.374e0

VQSLOD
type: SiteQuality
SIO_000300: -3.299e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.4e-2

QD
type: SiteQuality
SIO_000300: 1.08e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -6.055e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.4e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.5e-2

MQ
type: SiteQuality
SIO_000300: 3.618e1

GenotypeQuality
all individuals: 1096
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1338
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2337
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6439
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2972
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30339
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.745845723281441e-5
allele num: 11434
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15862
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62224
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 1.4e1

VQSLOD
type: SiteQuality
SIO_000300: -2.476e0

MQ
type: SiteQuality
SIO_000300: 4.138e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.77e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.14e-1

DP
type: SiteQuality
SIO_000300: 1.564233e6

GenotypeQuality
all individuals: 31010
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7139
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 640
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1871
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 930
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11427
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.805844283192783e-5
allele num: 10198
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQ
type: SiteQuality
SIO_000300: 3.797e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

FS
type: SiteQuality
SIO_000300: 1.113e0

VQSLOD
type: SiteQuality
SIO_000300: -2.026e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.56e0

MQRankSum
type: SiteQuality
SIO_000300: -7.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 2.360839e6

QD
type: SiteQuality
SIO_000300: 1.034e1

GenotypeQuality
all individuals: 928
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7137
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 11324
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variant carriers: 0

GenotypeQuality
all individuals: 3187
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1861
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30957
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501185936890143e-5
allele num: 66614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.047777441790142e-4
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.029e0

FS
type: SiteQuality
SIO_000300: 1.209e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 8.6e0

MQ
type: SiteQuality
SIO_000300: 3.285e1

VQSLOD
type: SiteQuality
SIO_000300: -5.609e0

MQRankSum
type: SiteQuality
SIO_000300: -2.259e0

DP
type: SiteQuality
SIO_000300: 2.358856e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.67e-1

GenotypeQuality
all individuals: 92
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3470
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7137
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3187
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1861
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 100
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002371873780286e-5
allele num: 66614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.285e1

QD
type: SiteQuality
SIO_000300: 8.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 2.358856e6

MQRankSum
type: SiteQuality
SIO_000300: -2.259e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.23e-1

FS
type: SiteQuality
SIO_000300: 1.209e1

VQSLOD
type: SiteQuality
SIO_000300: -5.609e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.029e0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11264
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1844
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7155
bin: 9.75e1
variant carriers: 199

GenotypeQuality
all individuals: 119
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30782
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 921
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 13
allele frequency: 1.965527668581796e-3
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 14
allele frequency: 8.48073661255149e-4
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.91426313709996e-4
allele num: 10124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.502223290469895e-4
allele num: 66568
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.455425017277125e-4
allele num: 11576
num of homozygotes: 1

East Asian
type: Population
allele count: 154
allele frequency: 1.781582600647848e-2
allele num: 8644
num of homozygotes: 2

MQRankSum
type: SiteQuality
SIO_000300: 1.59e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.994e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.53e-2

QD
type: SiteQuality
SIO_000300: 1.191e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 3.612e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

DP
type: SiteQuality
SIO_000300: 2.356137e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-1

GenotypeQuality
all individuals: 1853
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6980
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 115
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11313
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3170
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 926
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21153380179307e-4
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.013068949977468e-5
allele num: 66570
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.783e0

QD
type: SiteQuality
SIO_000300: 9.609999999999999e0

MQ
type: SiteQuality
SIO_000300: 3.3e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.893e0

VQSLOD
type: SiteQuality
SIO_000300: -4.136e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.0e-3

DP
type: SiteQuality
SIO_000300: 2.348325e6

GenotypeQuality
all individuals: 3448
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11313
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
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variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 926
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1853
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 195
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31072
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10134
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.004356316659156e-5
allele num: 66570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.783e0

DP
type: SiteQuality
SIO_000300: 2.348325e6

MQRankSum
type: SiteQuality
SIO_000300: -1.893e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.136e0

QD
type: SiteQuality
SIO_000300: 9.609999999999999e0

MQ
type: SiteQuality
SIO_000300: 3.3e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.75e-1

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3155
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 924
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31040
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11276
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3428
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66524
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.174e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.261e0

QD
type: SiteQuality
SIO_000300: 1.023e1

MQ
type: SiteQuality
SIO_000300: 3.519e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.341913e6

GenotypeQuality
all individuals: 241
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 120
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31027
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3153
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.141e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.868e0

VQSLOD
type: SiteQuality
SIO_000300: -4.384e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.416e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.339481e6

QD
type: SiteQuality
SIO_000300: 7.25e0

MQRankSum
type: SiteQuality
SIO_000300: 4.17e-1

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3142
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 919
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
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variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503985561738607e-5
allele num: 66490
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.529999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: -5.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.29e-1

DP
type: SiteQuality
SIO_000300: 2.33393e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.17e0

MQ
type: SiteQuality
SIO_000300: 3.314e1

VQSLOD
type: SiteQuality
SIO_000300: -4.618e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.04e-1

QD
type: SiteQuality
SIO_000300: 1.159e1

GenotypeQuality
all individuals: 137
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 2.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503940323647958e-5
allele num: 66492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.968891514077574e-4
allele num: 10158
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.340000000000001e-1

FS
type: SiteQuality
SIO_000300: 1.912e0

VQSLOD
type: SiteQuality
SIO_000300: -2.413e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.314e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.336819e6

QD
type: SiteQuality
SIO_000300: 7.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQ
type: SiteQuality
SIO_000300: 3.582e1

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3412
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 83
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variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.779010633379565e-4
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66474
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.867e0

MQ
type: SiteQuality
SIO_000300: 3.234e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 9.59e0

DP
type: SiteQuality
SIO_000300: 2.335779e6

MQRankSum
type: SiteQuality
SIO_000300: -1.11e0

VQSLOD
type: SiteQuality
SIO_000300: -4.208e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.739e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.21e-1

GenotypeQuality
all individuals: 31606
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 628
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 60
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GenotypeQuality
all individuals: 3414
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 125
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GenotypeQuality
all individuals: 6960
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variant carriers: 8

GenotypeQuality
all individuals: 59
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variant carriers: 0

GenotypeQuality
all individuals: 919
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variant carriers: 0

GenotypeQuality
all individuals: 34
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variant carriers: 0

GenotypeQuality
all individuals: 3137
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 7.860090391039497e-4
allele num: 10178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66468
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.337038e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.679e0

FS
type: SiteQuality
SIO_000300: 2.868e0

MQRankSum
type: SiteQuality
SIO_000300: -7.16e-1

QD
type: SiteQuality
SIO_000300: 2.835e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.12e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.519e0

MQ
type: SiteQuality
SIO_000300: 3.287e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

GenotypeQuality
all individuals: 866
bin: 9.25e1
variant carriers: 6

GenotypeQuality
all individuals: 10
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variant carriers: 1

GenotypeQuality
all individuals: 53
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variant carriers: 0

GenotypeQuality
all individuals: 11167
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
all individuals: 36
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GenotypeQuality
all individuals: 599
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GenotypeQuality
all individuals: 71
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variant carriers: 3

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 165
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variant carriers: 0

GenotypeQuality
all individuals: 13
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GenotypeQuality
all individuals: 59
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GenotypeQuality
all individuals: 40
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variant carriers: 0

GenotypeQuality
all individuals: 3113
bin: 7.25e1
variant carriers: 1

Other
type: Population
allele count: 8
allele frequency: 8.849557522123894e-3
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 134
allele frequency: 2.014734626371974e-3
allele num: 66510
num of homozygotes: 1

African
type: Population
allele count: 1579
allele frequency: 1.537487828627069e-1
allele num: 10270
num of homozygotes: 98

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 22
allele frequency: 1.341136308217508e-3
allele num: 16404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 89
allele frequency: 7.690978223297615e-3
allele num: 11572
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.396703e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.17e-1

QD
type: SiteQuality
SIO_000300: 1.099e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.03e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.76e0

VQSLOD
type: SiteQuality
SIO_000300: 2.8e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.413e0

MQ
type: SiteQuality
SIO_000300: 3.188e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 12
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503442884204829e-5
allele num: 66514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.783e0

QD
type: SiteQuality
SIO_000300: 7.67e0

DP
type: SiteQuality
SIO_000300: 2.281118e6

FS
type: SiteQuality
SIO_000300: 4.114e0

VQSLOD
type: SiteQuality
SIO_000300: -5.206e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

MQ
type: SiteQuality
SIO_000300: 3.041e1

MQRankSum
type: SiteQuality
SIO_000300: -3.341e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 66
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GenotypeQuality
all individuals: 114
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 12
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GenotypeQuality
all individuals: 6
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66576
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.42e-1

QD
type: SiteQuality
SIO_000300: 9.75e0

MQ
type: SiteQuality
SIO_000300: 3.579e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.93e-1

FS
type: SiteQuality
SIO_000300: 6.78e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.304e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.93e-1

DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.721e0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 11509
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 108
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GenotypeQuality
all individuals: 3476
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GenotypeQuality
all individuals: 896
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GenotypeQuality
all individuals: 626
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501862309263487e-5
allele num: 66584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.33e0

FS
type: SiteQuality
SIO_000300: 3.052e0

MQ
type: SiteQuality
SIO_000300: 3.127e1

QD
type: SiteQuality
SIO_000300: 1.076e1

MQRankSum
type: SiteQuality
SIO_000300: 8.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.33e-1

DP
type: SiteQuality
SIO_000300: 2.283271e6

VQSLOD
type: SiteQuality
SIO_000300: -4.413e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

GenotypeQuality
all individuals: 66
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32966
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1851
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 897
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3228
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11508
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3478
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5950
bin: 9.75e1
variant carriers: 5

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.829984544049459e-4
allele num: 10352
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66598
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.371e1

DP
type: SiteQuality
SIO_000300: 2.284017e6

MQRankSum
type: SiteQuality
SIO_000300: -1.168e0

FS
type: SiteQuality
SIO_000300: 1.117e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.679999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.653e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.79e0

QD
type: SiteQuality
SIO_000300: 1.142e1

GenotypeQuality
all individuals: 94
bin: 7.5e0
variant carriers: 24

GenotypeQuality
all individuals: 32683
bin: 6.25e1
variant carriers: 20

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 28

GenotypeQuality
all individuals: 109
bin: 5.25e1
variant carriers: 20

GenotypeQuality
all individuals: 5280
bin: 9.75e1
variant carriers: 407

GenotypeQuality
all individuals: 94
bin: 1.25e1
variant carriers: 31

GenotypeQuality
all individuals: 11422
bin: 6.75e1
variant carriers: 10

GenotypeQuality
all individuals: 119
bin: 3.25e1
variant carriers: 44

GenotypeQuality
all individuals: 93
bin: 1.75e1
variant carriers: 31

GenotypeQuality
all individuals: 93
bin: 4.75e1
variant carriers: 30

GenotypeQuality
all individuals: 832
bin: 9.25e1
variant carriers: 12

GenotypeQuality
all individuals: 3422
bin: 7.75e1
variant carriers: 17

GenotypeQuality
all individuals: 149
bin: 2.25e1
variant carriers: 38

GenotypeQuality
all individuals: 319
bin: 2.5e0
variant carriers: 13

GenotypeQuality
all individuals: 106
bin: 4.25e1
variant carriers: 24

GenotypeQuality
all individuals: 1788
bin: 8.25e1
variant carriers: 13

GenotypeQuality
all individuals: 111
bin: 5.75e1
variant carriers: 15

GenotypeQuality
all individuals: 592
bin: 8.75e1
variant carriers: 14

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.110233829334953e-4
allele num: 6586
num of homozygotes: 0

South Asian
type: Population
allele count: 252
allele frequency: 1.574212893553223e-2
allele num: 16008
num of homozygotes: 16

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 21
allele frequency: 2.030947775628627e-3
allele num: 10340
num of homozygotes: 0

Latino
type: Population
allele count: 14
allele frequency: 1.21317157712305e-3
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 14
allele frequency: 1.580135440180587e-2
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 420
allele frequency: 6.360552459413618e-3
allele num: 66032
num of homozygotes: 7

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.365e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.77e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.049e1

MQ
type: SiteQuality
SIO_000300: 3.728e1

QD
type: SiteQuality
SIO_000300: 1.8e0

FS
type: SiteQuality
SIO_000300: 5.6175e1

MQRankSum
type: SiteQuality
SIO_000300: -6.02e-1

DP
type: SiteQuality
SIO_000300: 2.312331e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.77e-1

GenotypeQuality
all individuals: 197
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33666
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3461
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variant carriers: 0

GenotypeQuality
all individuals: 3229
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 593
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1802
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11663
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5126
bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16376
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.933861922258751e-4
allele num: 10342
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.24e-1

MQ
type: SiteQuality
SIO_000300: 3.191e1

VQSLOD
type: SiteQuality
SIO_000300: -4.224e0

DP
type: SiteQuality
SIO_000300: 2.17979e6

FS
type: SiteQuality
SIO_000300: 1.319e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.37e0

MQRankSum
type: SiteQuality
SIO_000300: -1.342e0

QD
type: SiteQuality
SIO_000300: 3.6e0

GenotypeQuality
all individuals: 5125
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1801
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3459
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11653
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33546
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.110975311659741e-5
allele num: 16364
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.859999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.684e0

MQ
type: SiteQuality
SIO_000300: 3.543e1

DP
type: SiteQuality
SIO_000300: 2.178127e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.8e-1

FS
type: SiteQuality
SIO_000300: 9.399999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

MQRankSum
type: SiteQuality
SIO_000300: 3.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
all individuals: 5125
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11636
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 845
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variant carriers: 0

GenotypeQuality
all individuals: 3455
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 33389
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 73
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variant carriers: 0

GenotypeQuality
all individuals: 3224
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variant carriers: 0

GenotypeQuality
all individuals: 1802
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502494140272853e-5
allele num: 66556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16354
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

VQSLOD
type: SiteQuality
SIO_000300: -4.01e0

DP
type: SiteQuality
SIO_000300: 2.176667e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.74e-1

MQ
type: SiteQuality
SIO_000300: 3.252e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

FS
type: SiteQuality
SIO_000300: 8.72e-1

QD
type: SiteQuality
SIO_000300: 8.27e0

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-1

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 33127
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variant carriers: 0

GenotypeQuality
all individuals: 11553
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variant carriers: 0

GenotypeQuality
all individuals: 694
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variant carriers: 0

GenotypeQuality
all individuals: 129
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 3208
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GenotypeQuality
all individuals: 592
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variant carriers: 0

GenotypeQuality
all individuals: 1799
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variant carriers: 0

GenotypeQuality
all individuals: 74
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variant carriers: 0

GenotypeQuality
all individuals: 5122
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 844
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16344
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504166541319455e-5
allele num: 66482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.891999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: -4.63e-1

MQ
type: SiteQuality
SIO_000300: 3.631e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.763e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 2.174767e6

VQSLOD
type: SiteQuality
SIO_000300: -3.839e0

QD
type: SiteQuality
SIO_000300: 4.24e0

GenotypeQuality
all individuals: 32962
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1799
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 98
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 3206
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11516
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variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3439
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16334
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10192
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.88e0

MQ
type: SiteQuality
SIO_000300: 3.243e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.337e0

QD
type: SiteQuality
SIO_000300: 9.02e0

FS
type: SiteQuality
SIO_000300: 2.134e0

DP
type: SiteQuality
SIO_000300: 2.173633e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.082e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

GenotypeQuality
all individuals: 102
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 661
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GenotypeQuality
all individuals: 11346
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
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variant carriers: 0

GenotypeQuality
all individuals: 1787
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variant carriers: 0

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
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GenotypeQuality
all individuals: 3389
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3163
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32279
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variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
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GenotypeQuality
all individuals: 585
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variant carriers: 0

GenotypeQuality
all individuals: 5118
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 843
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.686862480029495e-4
allele num: 16274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65168
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.730702665282105e-4
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.3e-2

FS
type: SiteQuality
SIO_000300: 5.116e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -4.596e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

MQ
type: SiteQuality
SIO_000300: 3.276e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e-1

QD
type: SiteQuality
SIO_000300: 9.529999999999999e0

DP
type: SiteQuality
SIO_000300: 2.144944e6

GenotypeDepth
all individuals: 533
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3161
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 843
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5112
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 95
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11306
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3386
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32155
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1015
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1787
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9454
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.847290640394089e-4
allele num: 16240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65070
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.189e1

FS
type: SiteQuality
SIO_000300: 2.345e0

MQRankSum
type: SiteQuality
SIO_000300: -5.94e-1

DP
type: SiteQuality
SIO_000300: 2.137274e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.34e-1

MQ
type: SiteQuality
SIO_000300: 3.263e1

VQSLOD
type: SiteQuality
SIO_000300: -4.028e0

GenotypeQuality
all individuals: 29250
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3264
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 837
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10733
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3088
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1776
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5105
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9076
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.563526063979486e-5
allele num: 63958
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQ
type: SiteQuality
SIO_000300: 3.094e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.45e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.767e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.97e-1

DP
type: SiteQuality
SIO_000300: 2.07267e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.7e-1

QD
type: SiteQuality
SIO_000300: 1.352e1

GenotypeQuality
all individuals: 25225
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1803
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1514
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9368
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5103
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1014
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5739
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3193
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 765
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1746
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15080
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8814
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.593168493499873e-5
allele num: 62768
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11266
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
SIO_000300: 3.106e0

QD
type: SiteQuality
SIO_000300: 1.056e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.46e-1

MQ
type: SiteQuality
SIO_000300: 3.325e1

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.71e0

VQSLOD
type: SiteQuality
SIO_000300: -4.076e0

DP
type: SiteQuality
SIO_000300: 1.953409e6

GenotypeQuality
all individuals: 1122
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5109
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 123
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2120
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 79
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2998
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6858
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1701
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2961
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1646
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22571
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8032
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.127613647346886e-4
allele num: 62078
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.922198429693076e-5
allele num: 11208
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.152604887044721e-4
allele num: 8676
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.85035e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.556e0

MQRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

MQ
type: SiteQuality
SIO_000300: 3.098e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.627e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.890000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.69e-1