http://identifiers.org/exac.variant/19-55175006-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175006
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175005
    reference: chr 19
allele count: 5
allele frequency: 4.119702063146793e-5
allele num: 121368
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.52delA
  hgvsp: ENSP00000375613.3:p.Arg18GlyfsTer21
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-285delA
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.52delA
  hgvsp: ENSP00000401962.1:p.Arg18GlyfsTer21
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.52delA
  hgvsp: ENSP00000408995.2:p.Arg18GlyfsTer21
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.52delA
  hgvsp: ENSP00000375616.1:p.Arg18GlyfsTer21
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.52delA
  hgvsp: ENSP00000375614.3:p.Arg18GlyfsTer21
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.52delA
  hgvsp: ENSP00000270452.2:p.Arg18GlyfsTer21
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6883
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7456
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4534
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6185
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1856
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2168
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg18GlyfsTer21
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: CA
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

19-55175009-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175009
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175009
    reference: chr 19
allele count: 23922
allele frequency: 1.971940121340016e-1
allele num: 121312
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.54G>T
  hgvsp: ENSP00000375614.3:p.Arg18Ser
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-283G>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.54G>T
  hgvsp: ENSP00000401962.1:p.Arg18Ser
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.54G>T
  hgvsp: ENSP00000408995.2:p.Arg18Ser
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.54G>T
  hgvsp: ENSP00000375613.3:p.Arg18Ser
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.54G>T
  hgvsp: ENSP00000270452.2:p.Arg18Ser
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.54G>T
  hgvsp: ENSP00000375616.1:p.Arg18Ser
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3069
  bin: 7.25e1
  variant carriers: 1386
genotype depth: GenotypeDepth
  all individuals: 4939
  bin: 4.25e1
  variant carriers: 375
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 6.75e1
  variant carriers: 1323
genotype depth: GenotypeDepth
  all individuals: 5418
  bin: 4.75e1
  variant carriers: 526
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 2.25e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 2.75e1
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 3122
  bin: 3.25e1
  variant carriers: 185
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 7.75e1
  variant carriers: 1436
genotype depth: GenotypeDepth
  all individuals: 4075
  bin: 3.75e1
  variant carriers: 293
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4316
  bin: 6.25e1
  variant carriers: 1182
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 8.75e1
  variant carriers: 1450
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 9.25e1
  variant carriers: 1396
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 8.25e1
  variant carriers: 1451
genotype depth: GenotypeDepth
  all individuals: 5368
  bin: 5.25e1
  variant carriers: 749
genotype depth: GenotypeDepth
  all individuals: 10004
  bin: 9.75e1
  variant carriers: 8542
genotype depth: GenotypeDepth
  all individuals: 4977
  bin: 5.75e1
  variant carriers: 994
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 50482
  bin: 9.75e1
  variant carriers: 21321
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2191
  bin: 6.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 6
hgvs: p.Arg18Ser
num of homozygotes: 2429
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ

19-55175011-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175011
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175011
    reference: chr 19
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.56C>T
  hgvsp: ENSP00000408995.2:p.Thr19Ile
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.56C>T
  hgvsp: ENSP00000375614.3:p.Thr19Ile
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-281C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.56C>T
  hgvsp: ENSP00000375613.3:p.Thr19Ile
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.56C>T
  hgvsp: ENSP00000270452.2:p.Thr19Ile
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.56C>T
  hgvsp: ENSP00000375616.1:p.Thr19Ile
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.56C>T
  hgvsp: ENSP00000401962.1:p.Thr19Ile
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4860
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5917
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3008
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6038
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7009
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6949
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1376
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1789
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2308
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3625
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr19Ile
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

19-55175014-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175014
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175014
    reference: chr 19
allele count: 63
allele frequency: 5.190910139577806e-4
allele num: 121366
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.59A>T
  hgvsp: ENSP00000375616.1:p.His20Leu
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.59A>T
  hgvsp: ENSP00000408995.2:p.His20Leu
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-278A>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.59A>T
  hgvsp: ENSP00000375614.3:p.His20Leu
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.59A>T
  hgvsp: ENSP00000270452.2:p.His20Leu
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.59A>T
  hgvsp: ENSP00000401962.1:p.His20Leu
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.59A>T
  hgvsp: ENSP00000375613.3:p.His20Leu
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3660
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2689
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3016
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7000
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6939
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6034
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4860
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 9.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7408
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3670
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2312
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1790
  bin: 8.75e1
  variant carriers: 0
hgvs: p.His20Leu
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum

19-55175016-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175016
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175016
    reference: chr 19
allele count: 14
allele frequency: 1.154277422333619e-4
allele num: 121288
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.61A>G
  hgvsp: ENSP00000375616.1:p.Met21Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.61A>G
  hgvsp: ENSP00000375614.3:p.Met21Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.61A>G
  hgvsp: ENSP00000408995.2:p.Met21Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.61A>G
  hgvsp: ENSP00000401962.1:p.Met21Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-276A>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.61A>G
  hgvsp: ENSP00000270452.2:p.Met21Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.61A>G
  hgvsp: ENSP00000375613.3:p.Met21Val
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6037
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7414
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4793
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6927
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4882
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2705
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7006
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2207
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2303
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3656
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Met21Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/19-55175020-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175020
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175020
    reference: chr 19
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.65A>C
  hgvsp: ENSP00000375613.3:p.Gln22Pro
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.65A>C
  hgvsp: ENSP00000408995.2:p.Gln22Pro
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-272A>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.65A>C
  hgvsp: ENSP00000375616.1:p.Gln22Pro
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.65A>C
  hgvsp: ENSP00000270452.2:p.Gln22Pro
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.65A>C
  hgvsp: ENSP00000375614.3:p.Gln22Pro
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.65A>C
  hgvsp: ENSP00000401962.1:p.Gln22Pro
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4838
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6968
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7052
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7447
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5947
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1396
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43821
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gln22Pro
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

19-55175031-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175031
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175031
    reference: chr 19
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.70+6T>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.70+6T>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.70+6T>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.70+6T>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.70+6T>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-261T>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.70+6T>A
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7447
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7045
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3049
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6967
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4840
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3610
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1786
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2428
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2373
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: c.70+6T>A
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum

19-55175034-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175034
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175034
    reference: chr 19
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.70+9G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.70+9G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.70+9G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.70+9G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.70+9G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-258G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.70+9G>A
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4841
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6019
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6966
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7446
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3047
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7045
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3609
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1376
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2764
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2322
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/19-55175040-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175040
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175040
    reference: chr 19
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.70+15A>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.70+15A>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.70+15A>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.70+15A>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-252A>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.70+15A>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.70+15A>C
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6964
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7042
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4841
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7447
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3607
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5935
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1790
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2421
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3673
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

19-55175044-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175044
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175044
    reference: chr 19
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.70+19G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-248G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.70+19G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.70+19G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.70+19G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.70+19G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.70+19G>A
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7444
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2653
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3606
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4842
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5931
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6964
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7041
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2311
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2215
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2421
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

19-55175044-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175044
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175044
    reference: chr 19
allele count: 52
allele frequency: 4.284843191219367e-4
allele num: 121358
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.70+19G>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.70+19G>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.70+19G>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.70+19G>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.70+19G>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-248G>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.70+19G>C
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4842
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4788
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7041
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7444
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2653
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3606
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5931
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6964
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2311
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1789
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3584
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43801
  bin: 9.75e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

19-55175050-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175050
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175050
    reference: chr 19
allele count: 1
allele frequency: 8.240490473993011e-6
allele num: 121352
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.70+25G>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.70+25G>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-242G>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.70+25G>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.70+25G>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.70+25G>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.70+25G>C
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4748
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7043
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4838
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5929
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7445
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6966
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3609
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2974
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1791
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43786
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2763
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2197
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

19-55175057-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175057
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175057
    reference: chr 19
allele count: 1
allele frequency: 8.243071698237632e-6
allele num: 121314
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.70+32C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.70+32C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.70+32C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-235C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.70+32C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.70+32C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.70+32C>T
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7033
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5915
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6967
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4838
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3608
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4680
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1358
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2410
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2206
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/19-55175058-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175058
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175058
    reference: chr 19
allele count: 51
allele frequency: 4.224442125142886e-4
allele num: 120726
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.70+33C>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.70+33C>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.70+33C>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.70+33C>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-234C>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.70+33C>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.70+33C>A
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5866
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7021
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6022
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4870
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4645
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7030
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7427
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1734
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2315
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2077
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.5e0
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

19-55175058-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175058
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175058
    reference: chr 19
allele count: 3
allele frequency: 2.484965955966403e-5
allele num: 120726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.70+33C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.70+33C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.70+33C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.70+33C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-234C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.70+33C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.70+33C>T
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4645
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7021
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7427
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5866
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6022
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7030
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4870
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2077
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2681
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1286
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

19-55175062-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175062
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175062
    reference: chr 19
allele count: 2
allele frequency: 1.648994937585542e-5
allele num: 121286
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.70+37T>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.70+37T>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-230T>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.70+37T>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.70+37T>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.70+37T>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.70+37T>C
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7453
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5916
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5993
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4639
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7009
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4840
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6978
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3611
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1371
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2410
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2754
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43699
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

19-55175063-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175063
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175063
    reference: chr 19
allele count: 51
allele frequency: 4.224582097712099e-4
allele num: 120722
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.70+38C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.70+38C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-229C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.70+38C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.70+38C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.70+38C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.70+38C>T
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 4845
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4615
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6984
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5986
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7465
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7007
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3616
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2660
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2319
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2677
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 4.75e1
  variant carriers: 5
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

19-55175067-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175067
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175067
    reference: chr 19
allele count: 2
allele frequency: 1.65000165000165e-5
allele num: 121212
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.70+42G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.70+42G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.70+42G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-225G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.70+42G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.70+42G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.70+42G>A
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6970
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6915
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4637
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5943
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1874
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3572
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5890
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4785
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43510
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2161
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2918
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

19-55175070-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175070
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175070
    reference: chr 19
allele count: 17
allele frequency: 1.40321914981428e-4
allele num: 121150
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-222A>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.70+45A>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.70+45A>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.70+45A>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.70+45A>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.70+45A>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.70+45A>G
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7414
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4534
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5942
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6962
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4786
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5873
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6915
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3574
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 43511
  bin: 9.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2402
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2499
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum

19-55175073-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175073
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175072
    reference: chr 19
allele count: 6
allele frequency: 4.962861254942183e-5
allele num: 120898
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.70+52delG
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.70+52delG
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.70+52delG
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-215delG
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.70+52delG
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.70+52delG
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.70+52delG
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 7421
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5938
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4784
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6958
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5888
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4493
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2519
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1780
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: AG
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

19-55175076-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175076
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175076
    reference: chr 19
allele count: 1
allele frequency: 8.263643275047103e-6
allele num: 121012
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.70+51G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.70+51G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.70+51G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.70+51G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-216G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.70+51G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.70+51G>A
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4785
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6947
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6912
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5938
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5884
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2734
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2145
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2405
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1887
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-55175164-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175164
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175164
    reference: chr 19
allele count: 1
allele frequency: 8.383494575879009e-6
allele num: 119282
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.71-48C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.71-48C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.71-48C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-128C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.71-48C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.71-48C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.71-48C>T
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7563
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7920
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5358
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2856
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2289
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2548
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1083
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3180
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1101
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

19-55175185-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175185
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175185
    reference: chr 19
allele count: 1
allele frequency: 8.374928813105088e-6
allele num: 119404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.71-27G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.71-27G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.71-27G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.71-27G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-107G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.71-27G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.71-27G>A
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5364
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6914
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4606
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7612
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7963
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3889
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5092
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1285
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2600
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3094
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2342
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum

19-55175190-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175190
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175190
    reference: chr 19
allele count: 1
allele frequency: 8.365960579593749e-6
allele num: 119532
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.71-22C>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-102C>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.71-22C>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.71-22C>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.71-22C>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.71-22C>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.71-22C>G
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6637
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5019
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5184
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3889
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1980
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2613
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2817
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1590
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2406
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-55175197-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175197
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175197
    reference: chr 19
allele count: 1
allele frequency: 8.353241893178742e-6
allele num: 119714
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.71-15C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.71-15C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-95C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.71-15C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.71-15C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.71-15C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.71-15C>T
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5377
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5369
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6922
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7974
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6674
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5593
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1605
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6963
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

19-55175198-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175198
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175198
    reference: chr 19
allele count: 1
allele frequency: 8.351428094204109e-6
allele num: 119740
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.71-14T>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.71-14T>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.71-14T>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.71-14T>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.71-14T>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.71-14T>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-94T>C
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6922
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5644
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5368
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6678
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7636
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7975
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1984
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2839
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2470
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3114
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

19-55175213-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175213
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175213
    reference: chr 19
allele count: 1
allele frequency: 8.325008325008325e-6
allele num: 120120
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.72G>T
  hgvsp: ENST00000391736.1:c.72G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.72G>T
  hgvsp: ENST00000430952.2:c.72G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.72G>T
  hgvsp: ENST00000391733.3:c.72G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.72G>T
  hgvsp: ENST00000270452.2:c.72G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-79G>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.72G>T
  hgvsp: ENST00000391734.3:c.72G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.72G>T
  hgvsp: ENST00000434286.1:c.72G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7988
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5827
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1994
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
hgvs: c.72G>T
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum

http://identifiers.org/exac.variant/19-55175215-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175215
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175215
    reference: chr 19
allele count: 1
allele frequency: 8.319605983460623e-6
allele num: 120198
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.74C>A
  hgvsp: ENSP00000270452.2:p.Pro25His
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-77C>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.74C>A
  hgvsp: ENSP00000375613.3:p.Pro25His
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.74C>A
  hgvsp: ENSP00000375616.1:p.Pro25His
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.74C>A
  hgvsp: ENSP00000401962.1:p.Pro25His
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.74C>A
  hgvsp: ENSP00000408995.2:p.Pro25His
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.74C>A
  hgvsp: ENSP00000375614.3:p.Pro25His
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7985
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6151
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6796
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6925
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2669
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2854
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1994
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7963
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro25His
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD

19-55175219-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175219
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175219
    reference: chr 19
allele count: 3
allele frequency: 2.493848507016027e-5
allele num: 120296
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.78C>T
  hgvsp: ENST00000391733.3:c.78C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.78C>T
  hgvsp: ENST00000270452.2:c.78C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-73C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.78C>T
  hgvsp: ENST00000430952.2:c.78C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.78C>T
  hgvsp: ENST00000391736.1:c.78C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.78C>T
  hgvsp: ENST00000434286.1:c.78C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.78C>T
  hgvsp: ENST00000391734.3:c.78C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7663
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6817
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6011
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3120
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1657
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36067
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Leu26Leu
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

19-55175226-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175226
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175226
    reference: chr 19
allele count: 29
allele frequency: 2.406798791621021e-4
allele num: 120492
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.85C>G
  hgvsp: ENSP00000270452.2:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.85C>G
  hgvsp: ENSP00000375613.3:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.85C>G
  hgvsp: ENSP00000375614.3:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.85C>G
  hgvsp: ENSP00000408995.2:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.85C>G
  hgvsp: ENSP00000375616.1:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-66C>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.85C>G
  hgvsp: ENSP00000401962.1:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6921
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5365
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6185
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 9.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 7664
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6832
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36075
  bin: 9.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 2867
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3121
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2709
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro29Ala
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

19-55175229-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175229
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175229
    reference: chr 19
allele count: 1
allele frequency: 8.29228651508367e-6
allele num: 120594
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.88A>G
  hgvsp: ENSP00000375616.1:p.Thr30Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.88A>G
  hgvsp: ENSP00000375613.3:p.Thr30Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.88A>G
  hgvsp: ENSP00000408995.2:p.Thr30Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-63A>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.88A>G
  hgvsp: ENSP00000270452.2:p.Thr30Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.88A>G
  hgvsp: ENSP00000375614.3:p.Thr30Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.88A>G
  hgvsp: ENSP00000401962.1:p.Thr30Ala
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6255
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7665
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6922
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5367
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6844
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8610
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr30Ala
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-55175239-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175239
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175239
    reference: chr 19
allele count: 1
allele frequency: 8.273351534706709e-6
allele num: 120870
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.98C>A
  hgvsp: ENSP00000401962.1:p.Ala33Asp
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.98C>A
  hgvsp: ENSP00000375614.3:p.Ala33Asp
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.98C>A
  hgvsp: ENSP00000375613.3:p.Ala33Asp
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-53C>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.98C>A
  hgvsp: ENSP00000375616.1:p.Ala33Asp
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.98C>A
  hgvsp: ENSP00000408995.2:p.Ala33Asp
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.98C>A
  hgvsp: ENSP00000270452.2:p.Ala33Asp
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6922
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7985
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6872
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7666
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5366
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3123
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2702
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36076
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2792
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala33Asp
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

19-55175240-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175240
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175240
    reference: chr 19
allele count: 1
allele frequency: 8.271982794275789e-6
allele num: 120890
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.99T>A
  hgvsp: ENST00000391734.3:c.99T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.99T>A
  hgvsp: ENST00000430952.2:c.99T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.99T>A
  hgvsp: ENST00000270452.2:c.99T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.99T>A
  hgvsp: ENST00000391733.3:c.99T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.99T>A
  hgvsp: ENST00000434286.1:c.99T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.99T>A
  hgvsp: ENST00000391736.1:c.99T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-52T>A
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6871
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7666
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6605
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36076
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2873
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala33Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

19-55175241-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175241
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175241
    reference: chr 19
allele count: 1
allele frequency: 8.270751315049459e-6
allele num: 120908
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.100G>A
  hgvsp: ENSP00000375613.3:p.Glu34Lys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.100G>A
  hgvsp: ENSP00000375614.3:p.Glu34Lys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.100G>A
  hgvsp: ENSP00000270452.2:p.Glu34Lys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-51G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.100G>A
  hgvsp: ENSP00000408995.2:p.Glu34Lys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.100G>A
  hgvsp: ENSP00000401962.1:p.Glu34Lys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.100G>A
  hgvsp: ENSP00000375616.1:p.Glu34Lys
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5365
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6878
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7669
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7981
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2002
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2704
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu34Lys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

19-55175248-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175248
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175248
    reference: chr 19
allele count: 11
allele frequency: 9.083702186694853e-5
allele num: 121096
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.107G>C
  hgvsp: ENSP00000375614.3:p.Gly36Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.107G>C
  hgvsp: ENSP00000408995.2:p.Gly36Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.107G>C
  hgvsp: ENSP00000375616.1:p.Gly36Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.107G>C
  hgvsp: ENSP00000401962.1:p.Gly36Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.107G>C
  hgvsp: ENSP00000375613.3:p.Gly36Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.107G>C
  hgvsp: ENSP00000270452.2:p.Gly36Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-44G>C
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6887
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7668
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6726
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7980
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3124
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1722
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9114
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36086
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 1999
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly36Ala
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

19-55175248-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175248
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175248
    reference: chr 19
allele count: 4
allele frequency: 3.303164431525401e-5
allele num: 121096
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.107G>T
  hgvsp: ENSP00000408995.2:p.Gly36Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.107G>T
  hgvsp: ENSP00000375613.3:p.Gly36Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.107G>T
  hgvsp: ENSP00000375616.1:p.Gly36Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.107G>T
  hgvsp: ENSP00000270452.2:p.Gly36Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.107G>T
  hgvsp: ENSP00000375614.3:p.Gly36Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-44G>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.107G>T
  hgvsp: ENSP00000401962.1:p.Gly36Val
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7980
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6887
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6726
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5362
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2878
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2708
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly36Val
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ

19-55175250-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175250
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175250
    reference: chr 19
allele count: 1
allele frequency: 8.256002113536541e-6
allele num: 121124
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.109T>C
  hgvsp: ENSP00000375616.1:p.Ser37Pro
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.109T>C
  hgvsp: ENSP00000408995.2:p.Ser37Pro
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.109T>C
  hgvsp: ENSP00000375613.3:p.Ser37Pro
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.109T>C
  hgvsp: ENSP00000375614.3:p.Ser37Pro
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-42T>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.109T>C
  hgvsp: ENSP00000270452.2:p.Ser37Pro
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.109T>C
  hgvsp: ENSP00000401962.1:p.Ser37Pro
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6739
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7665
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6888
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3892
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5363
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2819
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2001
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2710
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser37Pro
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-55175253-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175253
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175253
    reference: chr 19
allele count: 1
allele frequency: 8.253821519363466e-6
allele num: 121156
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.112G>A
  hgvsp: ENSP00000408995.2:p.Val38Met
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.112G>A
  hgvsp: ENSP00000401962.1:p.Val38Met
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-39G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.112G>A
  hgvsp: ENSP00000375614.3:p.Val38Met
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.112G>A
  hgvsp: ENSP00000270452.2:p.Val38Met
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.112G>A
  hgvsp: ENSP00000375613.3:p.Val38Met
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.112G>A
  hgvsp: ENSP00000375616.1:p.Val38Met
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6484
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6744
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6889
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7666
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5363
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3892
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2710
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2879
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2825
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36082
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Val38Met
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

19-55175258-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175258
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175258
    reference: chr 19
allele count: 2
allele frequency: 1.649675014022238e-5
allele num: 121236
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-34C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.117C>T
  hgvsp: ENST00000270452.2:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.117C>T
  hgvsp: ENST00000391734.3:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.117C>T
  hgvsp: ENST00000391736.1:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.117C>T
  hgvsp: ENST00000391733.3:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.117C>T
  hgvsp: ENST00000434286.1:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.117C>T
  hgvsp: ENST00000430952.2:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6789
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7667
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6494
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6890
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5363
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3893
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3124
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2829
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile39Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

19-55175261-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175261
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175261
    reference: chr 19
allele count: 87
allele frequency: 7.1745476736323e-4
allele num: 121262
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.120C>T
  hgvsp: ENST00000391733.3:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.120C>T
  hgvsp: ENST00000391736.1:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.120C>T
  hgvsp: ENST00000434286.1:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.120C>T
  hgvsp: ENST00000270452.2:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-31C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.120C>T
  hgvsp: ENST00000430952.2:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.120C>T
  hgvsp: ENST00000391734.3:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7970
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5364
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7655
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6493
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6917
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 9.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 6883
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1995
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2704
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1722
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser40Ser
num of homozygotes: 1
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD

19-55175267-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175267
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175267
    reference: chr 19
allele count: 4
allele frequency: 3.296848213108268e-5
allele num: 121328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.126G>A
  hgvsp: ENST00000270452.2:c.126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.126G>A
  hgvsp: ENST00000391736.1:c.126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.126G>A
  hgvsp: ENST00000434286.1:c.126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.126G>A
  hgvsp: ENST00000391733.3:c.126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.126G>A
  hgvsp: ENST00000430952.2:c.126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-25G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.126G>A
  hgvsp: ENST00000391734.3:c.126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6521
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7653
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6796
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5359
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6898
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2827
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2710
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3118
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly42Gly
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-55175267-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175267
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175267
    reference: chr 19
allele count: 1
allele frequency: 8.242120532770671e-6
allele num: 121328
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.126G>C
  hgvsp: ENST00000270452.2:c.126G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.126G>C
  hgvsp: ENST00000391734.3:c.126G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.126G>C
  hgvsp: ENST00000430952.2:c.126G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.126G>C
  hgvsp: ENST00000391733.3:c.126G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.126G>C
  hgvsp: ENST00000391736.1:c.126G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-25G>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.126G>C
  hgvsp: ENST00000434286.1:c.126G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7653
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6796
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6898
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5359
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2877
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9257
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly42Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

19-55175274-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175274
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175274
    reference: chr 19
allele count: 4
allele frequency: 3.296033224014898e-5
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.133G>A
  hgvsp: ENSP00000375613.3:p.Val45Met
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-18G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.133G>A
  hgvsp: ENSP00000375616.1:p.Val45Met
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.133G>A
  hgvsp: ENSP00000375614.3:p.Val45Met
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.133G>A
  hgvsp: ENSP00000408995.2:p.Val45Met
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.133G>A
  hgvsp: ENSP00000270452.2:p.Val45Met
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.133G>A
  hgvsp: ENSP00000401962.1:p.Val45Met
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7655
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6899
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2878
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1998
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2829
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val45Met
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-55175284-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175284
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175284
    reference: chr 19
allele count: 2
allele frequency: 1.647555028337947e-5
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-8G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.143G>A
  hgvsp: ENSP00000375613.3:p.Trp48Ter
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.143G>A
  hgvsp: ENSP00000375616.1:p.Trp48Ter
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.143G>A
  hgvsp: ENSP00000408995.2:p.Trp48Ter
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.143G>A
  hgvsp: ENSP00000375614.3:p.Trp48Ter
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.143G>A
  hgvsp: ENSP00000401962.1:p.Trp48Ter
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.143G>A
  hgvsp: ENSP00000270452.2:p.Trp48Ter
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7655
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6826
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6916
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9292
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2878
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2833
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1728
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Trp48Ter
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

19-55175285-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175285
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175285
    reference: chr 19
allele count: 12
allele frequency: 9.885167306456661e-5
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.144G>T
  hgvsp: ENSP00000375613.3:p.Trp48Cys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.320-7G>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.144G>T
  hgvsp: ENSP00000375616.1:p.Trp48Cys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.144G>T
  hgvsp: ENSP00000401962.1:p.Trp48Cys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.144G>T
  hgvsp: ENSP00000408995.2:p.Trp48Cys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.144G>T
  hgvsp: ENSP00000270452.2:p.Trp48Cys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.144G>T
  hgvsp: ENSP00000375614.3:p.Trp48Cys
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6895
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6542
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6916
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5355
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3889
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7967
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7654
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9293
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2832
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1729
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36109
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Trp48Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

19-55175295-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175295
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175295
    reference: chr 19
allele count: 336
allele frequency: 2.767755646715761e-3
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.154A>G
  hgvsp: ENSP00000270452.2:p.Thr52Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.323A>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.154A>G
  hgvsp: ENSP00000401962.1:p.Thr52Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.154A>G
  hgvsp: ENSP00000375613.3:p.Thr52Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.154A>G
  hgvsp: ENSP00000375614.3:p.Thr52Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.154A>G
  hgvsp: ENSP00000408995.2:p.Thr52Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.154A>G
  hgvsp: ENSP00000375616.1:p.Thr52Ala
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5340
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6775
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7918
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7612
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 6509
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6893
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 8.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6861
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 9.75e1
  variant carriers: 252
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36270
  bin: 9.75e1
  variant carriers: 331
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1716
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr52Ala
num of homozygotes: 4
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD

19-55175297-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175297
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175297
    reference: chr 19
allele count: 816
allele frequency: 6.721581548599671e-3
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.156C>T
  hgvsp: ENST00000391736.1:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.325C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.156C>T
  hgvsp: ENST00000434286.1:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.156C>T
  hgvsp: ENST00000391734.3:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.156C>T
  hgvsp: ENST00000430952.2:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.156C>T
  hgvsp: ENST00000270452.2:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.156C>T
  hgvsp: ENST00000391733.3:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7541
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 7.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 6795
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 9.75e1
  variant carriers: 538
genotype depth: GenotypeDepth
  all individuals: 7856
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 5.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 6.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 8.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 6825
  bin: 4.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5297
  bin: 5.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 6.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6450
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 7.25e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3075
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1971
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr52Thr
num of homozygotes: 17
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

19-55175298-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175298
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175298
    reference: chr 19
allele count: 12
allele frequency: 9.884678747940691e-5
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.157C>G
  hgvsp: ENSP00000375613.3:p.Leu53Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.157C>G
  hgvsp: ENSP00000375616.1:p.Leu53Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.157C>G
  hgvsp: ENSP00000401962.1:p.Leu53Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.157C>G
  hgvsp: ENSP00000408995.2:p.Leu53Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.157C>G
  hgvsp: ENSP00000270452.2:p.Leu53Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.157C>G
  hgvsp: ENSP00000375614.3:p.Leu53Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.326C>G
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7865
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6844
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9274
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1709
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36348
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 1974
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu53Val
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD

19-55175307-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175307
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175307
    reference: chr 19
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.166C>T
  hgvsp: ENSP00000375616.1:p.Arg56Trp
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.166C>T
  hgvsp: ENSP00000375613.3:p.Arg56Trp
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.166C>T
  hgvsp: ENSP00000375614.3:p.Arg56Trp
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.335C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.166C>T
  hgvsp: ENSP00000270452.2:p.Arg56Trp
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.166C>T
  hgvsp: ENSP00000408995.2:p.Arg56Trp
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.166C>T
  hgvsp: ENSP00000401962.1:p.Arg56Trp
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6844
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1706
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36348
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2823
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1974
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg56Trp
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-55175316-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175316
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175316
    reference: chr 19
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.175C>A
  hgvsp: ENSP00000270452.2:p.Arg59Ser
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.175C>A
  hgvsp: ENSP00000401962.1:p.Arg59Ser
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.175C>A
  hgvsp: ENSP00000375613.3:p.Arg59Ser
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.175C>A
  hgvsp: ENSP00000375614.3:p.Arg59Ser
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.175C>A
  hgvsp: ENSP00000408995.2:p.Arg59Ser
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.344C>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.175C>A
  hgvsp: ENSP00000375616.1:p.Arg59Ser
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6841
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7552
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7865
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2715
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9287
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2669
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2798
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg59Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

19-55175316-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175316
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175316
    reference: chr 19
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.344C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.175C>T
  hgvsp: ENSP00000408995.2:p.Arg59Cys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.175C>T
  hgvsp: ENSP00000375614.3:p.Arg59Cys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.175C>T
  hgvsp: ENSP00000401962.1:p.Arg59Cys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.175C>T
  hgvsp: ENSP00000375616.1:p.Arg59Cys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.175C>T
  hgvsp: ENSP00000270452.2:p.Arg59Cys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.175C>T
  hgvsp: ENSP00000375613.3:p.Arg59Cys
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7552
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7865
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2715
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9287
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2669
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg59Cys
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ

19-55175317-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175317
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175317
    reference: chr 19
allele count: 8
allele frequency: 6.589243060703402e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.176G>A
  hgvsp: ENSP00000375613.3:p.Arg59His
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.176G>A
  hgvsp: ENSP00000375614.3:p.Arg59His
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.176G>A
  hgvsp: ENSP00000408995.2:p.Arg59His
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.345G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.176G>A
  hgvsp: ENSP00000375616.1:p.Arg59His
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.176G>A
  hgvsp: ENSP00000270452.2:p.Arg59His
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.176G>A
  hgvsp: ENSP00000401962.1:p.Arg59His
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2715
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7866
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6649
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3081
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36352
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9290
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg59His
num of homozygotes: 1
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

19-55175318-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175318
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175318
    reference: chr 19
allele count: 3
allele frequency: 2.470966147763776e-5
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.177T>C
  hgvsp: ENST00000270452.2:c.177T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.177T>C
  hgvsp: ENST00000391736.1:c.177T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.177T>C
  hgvsp: ENST00000434286.1:c.177T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.177T>C
  hgvsp: ENST00000430952.2:c.177T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.346T>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.177T>C
  hgvsp: ENST00000391733.3:c.177T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.177T>C
  hgvsp: ENST00000391734.3:c.177T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2715
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36354
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2820
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2799
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1972
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3080
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg59Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

19-55175319-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175319
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175319
    reference: chr 19
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.178C>G
  hgvsp: ENSP00000375614.3:p.Leu60Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.178C>G
  hgvsp: ENSP00000270452.2:p.Leu60Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.178C>G
  hgvsp: ENSP00000408995.2:p.Leu60Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.347C>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.178C>G
  hgvsp: ENSP00000375616.1:p.Leu60Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.178C>G
  hgvsp: ENSP00000375613.3:p.Leu60Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.178C>G
  hgvsp: ENSP00000401962.1:p.Leu60Val
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6649
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2715
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5292
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2821
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu60Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum

19-55175322-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175322
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175322
    reference: chr 19
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.181G>A
  hgvsp: ENSP00000270452.2:p.Asp61Asn
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.350G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.181G>A
  hgvsp: ENSP00000401962.1:p.Asp61Asn
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.181G>A
  hgvsp: ENSP00000408995.2:p.Asp61Asn
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.181G>A
  hgvsp: ENSP00000375613.3:p.Asp61Asn
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.181G>A
  hgvsp: ENSP00000375616.1:p.Asp61Asn
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.181G>A
  hgvsp: ENSP00000375614.3:p.Asp61Asn
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2715
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5292
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6578
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7865
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1972
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2822
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2668
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp61Asn
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

19-55175334-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175334
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175334
    reference: chr 19
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.193A>T
  hgvsp: ENSP00000375616.1:p.Ser65Cys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.193A>T
  hgvsp: ENSP00000270452.2:p.Ser65Cys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.193A>T
  hgvsp: ENSP00000408995.2:p.Ser65Cys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.193A>T
  hgvsp: ENSP00000401962.1:p.Ser65Cys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.193A>T
  hgvsp: ENSP00000375614.3:p.Ser65Cys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.362A>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.193A>T
  hgvsp: ENSP00000375613.3:p.Ser65Cys
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2715
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6578
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5292
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7865
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2799
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3081
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1708
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36356
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser65Cys
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

19-55175336-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175336
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175336
    reference: chr 19
allele count: 321
allele frequency: 2.64393377810724e-3
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.195C>T
  hgvsp: ENST00000391736.1:c.195C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.195C>T
  hgvsp: ENST00000391733.3:c.195C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.195C>T
  hgvsp: ENST00000430952.2:c.195C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.195C>T
  hgvsp: ENST00000434286.1:c.195C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.364C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.195C>T
  hgvsp: ENST00000391734.3:c.195C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.195C>T
  hgvsp: ENST00000270452.2:c.195C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5268
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6605
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6791
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 9.75e1
  variant carriers: 302
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3859
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6540
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7837
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7509
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1697
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2653
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9236
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3059
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2806
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser65Ser
num of homozygotes: 2
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

19-55175341-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175341
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175341
    reference: chr 19
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.200C>T
  hgvsp: ENSP00000270452.2:p.Ala67Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.200C>T
  hgvsp: ENSP00000408995.2:p.Ala67Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.200C>T
  hgvsp: ENSP00000401962.1:p.Ala67Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.200C>T
  hgvsp: ENSP00000375616.1:p.Ala67Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.369C>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.200C>T
  hgvsp: ENSP00000375614.3:p.Ala67Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.200C>T
  hgvsp: ENSP00000375613.3:p.Ala67Val
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7517
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6549
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6801
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5277
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6611
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7848
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3063
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2785
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1697
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2660
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2811
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala67Val
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-55175351-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175351
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175352
    reference: chr 19
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.211dupA
  hgvsp: ENSP00000408995.2:p.Arg71LysfsTer41
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.211dupA
  hgvsp: ENSP00000375614.3:p.Arg71LysfsTer41
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.211dupA
  hgvsp: ENSP00000375616.1:p.Arg71LysfsTer41
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.211dupA
  hgvsp: ENSP00000270452.2:p.Arg71LysfsTer41
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.380dupA
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.211dupA
  hgvsp: ENSP00000401962.1:p.Arg71LysfsTer41
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.211dupA
  hgvsp: ENSP00000375613.3:p.Arg71LysfsTer41
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6607
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5277
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6821
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6801
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7848
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7518
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36461
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3063
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1700
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg71LysfsTer41
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

19-55175352-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175352
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175352
    reference: chr 19
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.211A>T
  hgvsp: ENSP00000401962.1:p.Arg71Ter
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.211A>T
  hgvsp: ENSP00000375613.3:p.Arg71Ter
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.211A>T
  hgvsp: ENSP00000375614.3:p.Arg71Ter
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.380A>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.211A>T
  hgvsp: ENSP00000375616.1:p.Arg71Ter
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.211A>T
  hgvsp: ENSP00000270452.2:p.Arg71Ter
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.211A>T
  hgvsp: ENSP00000408995.2:p.Arg71Ter
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5277
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6801
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6607
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7518
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7848
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36461
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2662
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9255
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2787
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg71Ter
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff

19-55175353-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175353
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175353
    reference: chr 19
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.212G>A
  hgvsp: ENSP00000408995.2:p.Arg71Lys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.212G>A
  hgvsp: ENSP00000270452.2:p.Arg71Lys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.212G>A
  hgvsp: ENSP00000375616.1:p.Arg71Lys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.212G>A
  hgvsp: ENSP00000375613.3:p.Arg71Lys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.381G>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.212G>A
  hgvsp: ENSP00000375614.3:p.Arg71Lys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.212G>A
  hgvsp: ENSP00000401962.1:p.Arg71Lys
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7518
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7848
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5277
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6820
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6607
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6800
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3063
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2662
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg71Lys
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

19-55175370-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175370
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175370
    reference: chr 19
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.229C>G
  hgvsp: ENSP00000408995.2:p.Pro77Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.229C>G
  hgvsp: ENSP00000401962.1:p.Pro77Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.398C>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.229C>G
  hgvsp: ENSP00000270452.2:p.Pro77Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.229C>G
  hgvsp: ENSP00000375613.3:p.Pro77Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.229C>G
  hgvsp: ENSP00000375614.3:p.Pro77Ala
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.229C>G
  hgvsp: ENSP00000375616.1:p.Pro77Ala
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6557
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6605
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5277
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7847
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6800
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3064
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2812
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro77Ala
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP

19-55175379-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175379
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175379
    reference: chr 19
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.407A>T
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.238A>T
  hgvsp: ENSP00000375614.3:p.Lys80Ter
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.238A>T
  hgvsp: ENSP00000270452.2:p.Lys80Ter
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.238A>T
  hgvsp: ENSP00000401962.1:p.Lys80Ter
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.238A>T
  hgvsp: ENSP00000408995.2:p.Lys80Ter
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.238A>T
  hgvsp: ENSP00000375613.3:p.Lys80Ter
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.238A>T
  hgvsp: ENSP00000375616.1:p.Lys80Ter
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5277
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7847
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6605
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1962
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2664
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3064
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Lys80Ter
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS

http://identifiers.org/exac.variant/19-55175390-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175390
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175390
    reference: chr 19
allele count: 3
allele frequency: 2.470925443942938e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.249C>A
  hgvsp: ENSP00000375614.3:p.Phe83Leu
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.249C>A
  hgvsp: ENSP00000270452.2:p.Phe83Leu
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.249C>A
  hgvsp: ENSP00000375613.3:p.Phe83Leu
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.249C>A
  hgvsp: ENSP00000401962.1:p.Phe83Leu
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.249C>A
  hgvsp: ENSP00000375616.1:p.Phe83Leu
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.418C>A
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.249C>A
  hgvsp: ENSP00000408995.2:p.Phe83Leu
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6602
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7848
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5277
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1701
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2784
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9255
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Phe83Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

19-55175399-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175399
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175399
    reference: chr 19
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.258A>G
  hgvsp: ENST00000391733.3:c.258A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.258A>G
  hgvsp: ENST00000391734.3:c.258A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.258A>G
  hgvsp: ENST00000430952.2:c.258A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.258A>G
  hgvsp: ENST00000391736.1:c.258A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.258A>G
  hgvsp: ENST00000434286.1:c.258A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.258A>G
  hgvsp: ENST00000270452.2:c.258A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.427A>G
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6798
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3878
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6601
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7847
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3063
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1699
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2811
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro86Pro
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

19-55175399-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175399
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175399
    reference: chr 19
allele count: 12
allele frequency: 9.883701775771753e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.258A>T
  hgvsp: ENST00000391734.3:c.258A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.258A>T
  hgvsp: ENST00000391736.1:c.258A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.258A>T
  hgvsp: ENST00000430952.2:c.258A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.258A>T
  hgvsp: ENST00000434286.1:c.258A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.258A>T
  hgvsp: ENST00000270452.2:c.258A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.258A>T
  hgvsp: ENST00000391733.3:c.258A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.427A>T
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7847
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6601
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3878
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6798
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5278
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3063
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1699
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro86Pro
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-55175403-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175403
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175403
    reference: chr 19
allele count: 5
allele frequency: 4.11820907323823e-5
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.262A>G
  hgvsp: ENSP00000408995.2:p.Met88Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.431A>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.262A>G
  hgvsp: ENSP00000270452.2:p.Met88Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.262A>G
  hgvsp: ENSP00000375614.3:p.Met88Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.262A>G
  hgvsp: ENSP00000401962.1:p.Met88Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.262A>G
  hgvsp: ENSP00000375616.1:p.Met88Val
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.262A>G
  hgvsp: ENSP00000375613.3:p.Met88Val
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6798
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6599
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7518
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7847
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2662
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1961
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Met88Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

19-55175407-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175407
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175405
    reference: chr 19
allele count: 32
allele frequency: 2.635653806872468e-4
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.269_270delAG
  hgvsp: ENSP00000408995.2:p.Glu90GlyfsTer21
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.269_270delAG
  hgvsp: ENSP00000375613.3:p.Glu90GlyfsTer21
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.269_270delAG
  hgvsp: ENSP00000375616.1:p.Glu90GlyfsTer21
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.269_270delAG
  hgvsp: ENSP00000375614.3:p.Glu90GlyfsTer21
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.269_270delAG
  hgvsp: ENSP00000401962.1:p.Glu90GlyfsTer21
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.438_439delAG
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.269_270delAG
  hgvsp: ENSP00000270452.2:p.Glu90GlyfsTer21
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5278
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6810
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7842
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3879
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 9.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 6559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6796
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2783
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3060
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2660
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9249
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Glu90GlyfsTer21
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: CAG
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

19-55175410-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175410
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175410
    reference: chr 19
allele count: 2
allele frequency: 1.648152421135907e-5
allele num: 121348
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.269A>G
  hgvsp: ENSP00000375614.3:p.Glu90Gly
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.269A>G
  hgvsp: ENSP00000401962.1:p.Glu90Gly
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.269A>G
  hgvsp: ENSP00000270452.2:p.Glu90Gly
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.438A>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.269A>G
  hgvsp: ENSP00000408995.2:p.Glu90Gly
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.269A>G
  hgvsp: ENSP00000375613.3:p.Glu90Gly
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.269A>G
  hgvsp: ENSP00000375616.1:p.Glu90Gly
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3879
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6794
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6810
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7842
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5278
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2660
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9248
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Glu90Gly
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

19-55175412-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175412
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175412
    reference: chr 19
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.271G>C
  hgvsp: ENSP00000270452.2:p.Asp91His
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.271G>C
  hgvsp: ENSP00000375613.3:p.Asp91His
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.271G>C
  hgvsp: ENSP00000375616.1:p.Asp91His
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.271G>C
  hgvsp: ENSP00000408995.2:p.Asp91His
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.271G>C
  hgvsp: ENSP00000401962.1:p.Asp91His
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.271G>C
  hgvsp: ENSP00000375614.3:p.Asp91His
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.440G>C
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3881
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5279
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6794
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7842
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6561
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9249
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp91His
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

19-55175417-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175417
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175417
    reference: chr 19
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.276T>C
  hgvsp: ENST00000391733.3:c.276T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.276T>C
  hgvsp: ENST00000434286.1:c.276T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.276T>C
  hgvsp: ENST00000391736.1:c.276T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.276T>C
  hgvsp: ENST00000430952.2:c.276T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.276T>C
  hgvsp: ENST00000270452.2:c.276T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.445T>C
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.276T>C
  hgvsp: ENST00000391734.3:c.276T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7842
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3882
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6560
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6794
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5279
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3060
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36483
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2809
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Tyr92Tyr
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD

19-55175428-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55175428
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55175428
    reference: chr 19
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000270452
  ensembl transcript: ENST00000270452
  gene symbol: LILRB4
  hgvsc: ENST00000270452.2:c.287A>G
  hgvsp: ENSP00000270452.2:p.Tyr96Cys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000401962
  ensembl transcript: ENST00000434286
  gene symbol: LILRB4
  hgvsc: ENST00000434286.1:c.287A>G
  hgvsp: ENSP00000401962.1:p.Tyr96Cys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000186818
  ensembl transcript: ENST00000494796
  gene symbol: LILRB4
  hgvsc: ENST00000494796.1:n.456A>G
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375613
  ensembl transcript: ENST00000391733
  gene symbol: LILRB4
  hgvsc: ENST00000391733.3:c.287A>G
  hgvsp: ENSP00000375613.3:p.Tyr96Cys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000408995
  ensembl transcript: ENST00000430952
  gene symbol: LILRB4
  hgvsc: ENST00000430952.2:c.287A>G
  hgvsp: ENSP00000408995.2:p.Tyr96Cys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375616
  ensembl transcript: ENST00000391736
  gene symbol: LILRB4
  hgvsc: ENST00000391736.1:c.287A>G
  hgvsp: ENSP00000375616.1:p.Tyr96Cys
  variant of: http://identifiers.org/hgnc/6608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000186818
  ensembl protein: ENSP00000375614
  ensembl transcript: ENST00000391734
  gene symbol: LILRB4
  hgvsc: ENST00000391734.3:c.287A>G
  hgvsp: ENSP00000375614.3:p.Tyr96Cys
  variant of: http://identifiers.org/hgnc/6608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7842
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6584
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6556
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5279
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6794
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Tyr96Cys
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 68
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1876
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2824
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2481
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46268
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1240
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1634
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.777675063554426e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.06e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.230973e6

QD
type: SiteQuality
SIO_000300: 1.442e1

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.725e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.792e0

GenotypeQuality
all individuals: 68
bin: 2.25e1
variant carriers: 6

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 5

GenotypeQuality
all individuals: 1294
bin: 7.75e1
variant carriers: 11

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 8

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 5

GenotypeQuality
all individuals: 1342
bin: 6.75e1
variant carriers: 16

GenotypeQuality
all individuals: 819
bin: 7.25e1
variant carriers: 9

GenotypeQuality
all individuals: 1698
bin: 9.25e1
variant carriers: 18

GenotypeQuality
all individuals: 1469
bin: 8.25e1
variant carriers: 11

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1117
bin: 8.75e1
variant carriers: 15

South Asian
type: Population
allele count: 4737
allele frequency: 2.871605237633366e-1
allele num: 16496
num of homozygotes: 700

African
type: Population
allele count: 2199
allele frequency: 2.116865614170196e-1
allele num: 10388
num of homozygotes: 219

Other
type: Population
allele count: 179
allele frequency: 1.980088495575221e-1
allele num: 904
num of homozygotes: 20

East Asian
type: Population
allele count: 1002
allele frequency: 1.158381502890173e-1
allele num: 8650
num of homozygotes: 49

European (Finnish)
type: Population
allele count: 1107
allele frequency: 1.674735249621785e-1
allele num: 6610
num of homozygotes: 94

Latino
type: Population
allele count: 2328
allele frequency: 2.012448132780083e-1
allele num: 11568
num of homozygotes: 220

European (Non-Finnish)
type: Population
allele count: 12370
allele frequency: 1.854683939066811e-1
allele num: 66696
num of homozygotes: 1127

QD
type: SiteQuality
SIO_000300: 1.304e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.417e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.13e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.097969e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.38e-1

MQ
type: SiteQuality
SIO_000300: 5.655e1

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2216
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44019
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2402
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2759
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498935755613514e-5
allele num: 66714
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

FS
type: SiteQuality
SIO_000300: 9.96e-1

DP
type: SiteQuality
SIO_000300: 3.267194e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.712e1

MQRankSum
type: SiteQuality
SIO_000300: 2.13e0

QD
type: SiteQuality
SIO_000300: 1.113e1

VQSLOD
type: SiteQuality
SIO_000300: -9.856e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.857e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.34e-1

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2215
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2399
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1378
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2757
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44017
bin: 9.75e1
variant carriers: 63

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.088745088976196e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 48
allele frequency: 7.194891626944869e-4
allele num: 66714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 7
allele frequency: 1.058361052313275e-3
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.208e1

MQRankSum
type: SiteQuality
SIO_000300: -1.525e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.096e-1

MQ
type: SiteQuality
SIO_000300: 5.574e1

DP
type: SiteQuality
SIO_000300: 3.269594e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.35e-1

GenotypeQuality
all individuals: 1786
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 1376
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2408
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 2761
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 43768
bin: 9.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999400119976005e-5
allele num: 66680
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.241396025206011e-4
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.858769052672198e-4
allele num: 10366
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.8e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.564e0

DP
type: SiteQuality
SIO_000300: 3.271185e6

FS
type: SiteQuality
SIO_000300: 1.792e0

VQSLOD
type: SiteQuality
SIO_000300: -3.531e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

MQ
type: SiteQuality
SIO_000300: 5.529e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2244
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2433
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1783
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2367
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3750
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2766
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.907e0

FS
type: SiteQuality
SIO_000300: 1.901e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.14e0

DP
type: SiteQuality
SIO_000300: 3.260839e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.393e0

MQRankSum
type: SiteQuality
SIO_000300: 1.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.988e0

MQ
type: SiteQuality
SIO_000300: 5.315e1

QD
type: SiteQuality
SIO_000300: 9.57e0

GenotypeQuality
all individuals: 2240
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3689
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2764
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43809
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1392
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.34e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.742e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.24e1

DP
type: SiteQuality
SIO_000300: 3.25982e6

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43808
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2421
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1789
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3597
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2226
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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ReadPosRankSum
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SIO_000300: -6.909999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.529e1

BaseQRankSum
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SIO_000300: -2.316e0

QD
type: SiteQuality
SIO_000300: 1.227e1

DP
type: SiteQuality
SIO_000300: 3.258819e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 8.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.459e1

BaseQRankSum
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SIO_000300: -2.523e0

DP
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SIO_000300: 3.258207e6

VQSLOD
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ReadPosRankSum
type: SiteQuality
SIO_000300: -8.73e-1

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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SIO_000300: 6.53e-1

InbreedingCoeff
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BaseQRankSum
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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DP
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MQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

MQ
type: SiteQuality
SIO_000300: 5.465e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

Latino
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allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

East Asian
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South Asian
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Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 51
allele frequency: 4.908565928777671e-3
allele num: 10390
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.506e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e0

DP
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 6.43e-1

MQ
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SIO_000300: 5.465e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

QD
type: SiteQuality
SIO_000300: 1.309e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.53e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.098e0

QD
type: SiteQuality
SIO_000300: 1.232e1

DP
type: SiteQuality
SIO_000300: 3.255496e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.2e-1

MQ
type: SiteQuality
SIO_000300: 5.417e1

FS
type: SiteQuality
SIO_000300: 1.5554e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.28e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.294e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.166e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10374
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.28e-1

FS
type: SiteQuality
SIO_000300: 9.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.49e-1

InbreedingCoeff
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SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-1

VQSLOD
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BaseQRankSum
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DP
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SIO_000300: 3.251865e6

MQ
type: SiteQuality
SIO_000300: 5.708e1

QD
type: SiteQuality
SIO_000300: 1.3e1

GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

South Asian
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allele count: 12
allele frequency: 7.32243104710764e-4
allele num: 16388
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

East Asian
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allele count: 3
allele frequency: 3.484320557491289e-4
allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
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allele count: 25
allele frequency: 3.763586547436245e-4
allele num: 66426
num of homozygotes: 0

African
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allele count: 7
allele frequency: 6.809338521400778e-4
allele num: 10280
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
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Latino
type: Population
allele count: 3
allele frequency: 2.603262755987504e-4
allele num: 11524
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.257701e6

FS
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
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VQSLOD
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66426
num of homozygotes: 0

East Asian
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allele count: 0
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allele num: 8610
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African
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Other
type: Population
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South Asian
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allele frequency: 1.83060776177691e-4
allele num: 16388
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6600
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Latino
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num of homozygotes: 0

FS
type: SiteQuality
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QD
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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DP
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InbreedingCoeff
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MQ
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele num: 8654
num of homozygotes: 0

Other
type: Population
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African
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.000210014701029e-5
allele num: 66662
num of homozygotes: 0

Latino
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num of homozygotes: 0

QD
type: SiteQuality
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BaseQRankSum
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VQSLOD
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DP
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MQ
type: SiteQuality
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ClippingRankSum
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FS
type: SiteQuality
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MQRankSum
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 17

African
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allele count: 7
allele frequency: 6.819953234606392e-4
allele num: 10264
num of homozygotes: 0

European (Non-Finnish)
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allele count: 25
allele frequency: 3.765173649808729e-4
allele num: 66398
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
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Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 12
allele frequency: 7.309051041539773e-4
allele num: 16418
num of homozygotes: 0

Latino
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allele count: 3
allele frequency: 2.600104004160167e-4
allele num: 11538
num of homozygotes: 0

East Asian
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allele count: 3
allele frequency: 3.485130111524163e-4
allele num: 8608
num of homozygotes: 0

QD
type: SiteQuality
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DP
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MQRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 1.2996e1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 13
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10338
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.001921229586936e-5
allele num: 66624
num of homozygotes: 0

Other
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-3

VQSLOD
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QD
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FS
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InbreedingCoeff
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MQ
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BaseQRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.19e-1

DP
type: SiteQuality
SIO_000300: 3.234664e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 16
allele frequency: 2.402835345707935e-4
allele num: 66588
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

DP
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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FS
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ClippingRankSum
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MQ
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BaseQRankSum
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QD
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SIO_000300: 1.463e1

MQRankSum
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SIO_000300: 2.77e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
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allele count: 3
allele frequency: 2.935420743639922e-4
allele num: 10220
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 4.515760002408406e-5
allele num: 66434
num of homozygotes: 0

MQRankSum
type: SiteQuality
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FS
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SIO_000300: 6.18e1

ClippingRankSum
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MQ
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SIO_000300: 5.42e1

DP
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.26e-1

QD
type: SiteQuality
SIO_000300: 6.6e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503352476021528e-5
allele num: 66518
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.37e0

FS
type: SiteQuality
SIO_000300: 1.636e0

InbreedingCoeff
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DP
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SIO_000300: 3.231493e6

MQ
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SIO_000300: 5.592e1

VQSLOD
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QD
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MQRankSum
type: SiteQuality
SIO_000300: -1.485e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.29e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15870
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.019991840065279e-4
allele num: 9804
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8614
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65972
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.223e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.526e0

InbreedingCoeff
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DP
type: SiteQuality
SIO_000300: 2.579005e6

MQRankSum
type: SiteQuality
SIO_000300: 2.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.57e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.885e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.11e0

MQ
type: SiteQuality
SIO_000300: 5.804e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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African
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15914
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.513775355737209e-5
allele num: 66060
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.07e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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MQ
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele num: 8610
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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Latino
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allele frequency: 8.671522719389525e-5
allele num: 11532
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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BaseQRankSum
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QD
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MQRankSum
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VQSLOD
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MQ
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DP
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InbreedingCoeff
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FS
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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Other
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African
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European (Non-Finnish)
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allele num: 66170
num of homozygotes: 0

East Asian
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FS
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MQ
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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DP
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VQSLOD
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ClippingRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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Latino
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European (Finnish)
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African
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Other
type: Population
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European (Non-Finnish)
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allele num: 66180
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FS
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MQRankSum
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ClippingRankSum
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VQSLOD
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DP
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BaseQRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele num: 6602
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Latino
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East Asian
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Other
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66300
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South Asian
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BaseQRankSum
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QD
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VQSLOD
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SIO_000300: -2.857e0

FS
type: SiteQuality
SIO_000300: 7.742e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.86e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

DP
type: SiteQuality
SIO_000300: 2.626121e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9822
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507704369327262e-5
allele num: 66326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.627503e6

MQRankSum
type: SiteQuality
SIO_000300: -1.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.508e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.339e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.923e1

FS
type: SiteQuality
SIO_000300: 3.621e0

QD
type: SiteQuality
SIO_000300: 1.606e1

VQSLOD
type: SiteQuality
SIO_000300: -1.244e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9826
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
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allele count: 3
allele frequency: 1.826372823572385e-4
allele num: 16426
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.14e-1

DP
type: SiteQuality
SIO_000300: 2.630599e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.83e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.921e0

FS
type: SiteQuality
SIO_000300: 1.125e0

MQRankSum
type: SiteQuality
SIO_000300: 6.909999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.489e0

QD
type: SiteQuality
SIO_000300: 1.33e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.2e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.541326067211626e-4
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 26
allele frequency: 3.912009870301827e-4
allele num: 66462
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.870000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.44e0

QD
type: SiteQuality
SIO_000300: 1.331e1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

FS
type: SiteQuality
SIO_000300: 2.01e0

DP
type: SiteQuality
SIO_000300: 2.636816e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.43e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

GenotypeQuality
all individuals: 2866
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1997
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503668952243474e-5
allele num: 66504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9910
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.15e-1

DP
type: SiteQuality
SIO_000300: 2.638339e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.932e1

VQSLOD
type: SiteQuality
SIO_000300: 4.25e-1

QD
type: SiteQuality
SIO_000300: 1.353e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.809e0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2002
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501005673801447e-5
allele num: 66622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10016
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.64333e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.447e0

VQSLOD
type: SiteQuality
SIO_000300: -1.266e0

QD
type: SiteQuality
SIO_000300: 6.64e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.11e-1

MQ
type: SiteQuality
SIO_000300: 5.907e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.976057462090982e-5
allele num: 10024
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.64361e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.1e-1

QD
type: SiteQuality
SIO_000300: 1.377e1

MQRankSum
type: SiteQuality
SIO_000300: 1.84e0

FS
type: SiteQuality
SIO_000300: 8.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.028e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.981e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500690317546071e-5
allele num: 66636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10030
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.36e-1

MQ
type: SiteQuality
SIO_000300: 5.824e1

BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 8.859999999999999e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 2.644222e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.6e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 6.664243305464679e-4
allele num: 16506
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.313e1

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.899e1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.15e-1

DP
type: SiteQuality
SIO_000300: 2.64722e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.998440405494571e-5
allele num: 66684
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.15e-1

InbreedingCoeff
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SIO_000300: 4.0e-4

ClippingRankSum
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SIO_000300: -6.900000000000001e-2

DP
type: SiteQuality
SIO_000300: 2.64722e6

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.899e1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9137
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.544e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.34e0

FS
type: SiteQuality
SIO_000300: 1.2144e1

DP
type: SiteQuality
SIO_000300: 2.647368e6

MQRankSum
type: SiteQuality
SIO_000300: -2.84e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.248e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.77e-1

GenotypeQuality
all individuals: 1998
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1726
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -3.43e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.999999999999999e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.362e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

QD
type: SiteQuality
SIO_000300: 9.390000000000001e0

GenotypeQuality
all individuals: 2709
bin: 7.75e1
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GenotypeQuality
all individuals: 16
bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1727
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1998
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.849e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 7.17e0

VQSLOD
type: SiteQuality
SIO_000300: -6.201e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.76e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

DP
type: SiteQuality
SIO_000300: 2.648658e6

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.06e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 86

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2874
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9196
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 87
allele frequency: 5.270172037799854e-3
allele num: 16508
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.32e-1

MQ
type: SiteQuality
SIO_000300: 5.934e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.61e0

MQRankSum
type: SiteQuality
SIO_000300: 3.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.77e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.62e0

DP
type: SiteQuality
SIO_000300: 2.6544e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.384e1

GenotypeQuality
all individuals: 42
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1720
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.995203836930456e-5
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.652335e6

VQSLOD
type: SiteQuality
SIO_000300: 2.63e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.1e-2

QD
type: SiteQuality
SIO_000300: 1.543e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.347e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.7e-1

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36103
bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 2827
bin: 6.75e1
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GenotypeQuality
all individuals: 12
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GenotypeQuality
all individuals: 3118
bin: 9.25e1
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GenotypeQuality
all individuals: 2710
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1996
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.7e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.63e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.347e0

MQRankSum
type: SiteQuality
SIO_000300: -5.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e-1

DP
type: SiteQuality
SIO_000300: 2.652335e6

QD
type: SiteQuality
SIO_000300: 1.543e1

GenotypeQuality
all individuals: 1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.995024129972123e-5
allele num: 66722
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.981e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

QD
type: SiteQuality
SIO_000300: 1.31e1

DP
type: SiteQuality
SIO_000300: 2.652865e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.446e0

FS
type: SiteQuality
SIO_000300: 1.873e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.34e-1

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3120
bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 36104
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997242536866083e-5
allele num: 66728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
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allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.984e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.156e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e0

DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.217e1

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.498621268433042e-4
allele num: 66728
num of homozygotes: 0

South Asian
type: Population
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Latino
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allele num: 11578
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East Asian
type: Population
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Other
type: Population
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.935e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
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European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.198861081972126e-4
allele num: 66730
num of homozygotes: 0

Other
type: Population
allele count: 1
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allele num: 908
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African
type: Population
allele count: 317
allele frequency: 3.047490867140934e-2
allele num: 10402
num of homozygotes: 4

Latino
type: Population
allele count: 10
allele frequency: 8.637070305752289e-4
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.97e-1

FS
type: SiteQuality
SIO_000300: 2.079e0

DP
type: SiteQuality
SIO_000300: 2.681294e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.24e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

MQ
type: SiteQuality
SIO_000300: 5.918e1

QD
type: SiteQuality
SIO_000300: 1.452e1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 799

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2662
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1697
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997152704930316e-5
allele num: 66730
num of homozygotes: 0

African
type: Population
allele count: 252
allele frequency: 2.422145328719723e-2
allele num: 10404
num of homozygotes: 4

Latino
type: Population
allele count: 23
allele frequency: 1.986526170323026e-3
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.303964757709251e-3
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 535
allele frequency: 3.240067829457365e-2
allele num: 16512
num of homozygotes: 13

MQ
type: SiteQuality
SIO_000300: 5.93e1

VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.08e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.51e-1

FS
type: SiteQuality
SIO_000300: 1.972e0

QD
type: SiteQuality
SIO_000300: 1.51e1

DP
type: SiteQuality
SIO_000300: 2.72808e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.85e-2

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 2
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 12
allele frequency: 1.386642015253062e-3
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.396e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.243e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.29e-1

FS
type: SiteQuality
SIO_000300: 2.611e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

DP
type: SiteQuality
SIO_000300: 2.687347e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2668
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variant carriers: 0

GenotypeQuality
all individuals: 3079
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.07e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

MQRankSum
type: SiteQuality
SIO_000300: -1.248e0

FS
type: SiteQuality
SIO_000300: 4.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.187e0

DP
type: SiteQuality
SIO_000300: 2.686963e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.571e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.429e0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2823
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 36350
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1973
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.09e0

MQ
type: SiteQuality
SIO_000300: 5.927e1

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.301e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.85e-1

FS
type: SiteQuality
SIO_000300: 5.89e-1

DP
type: SiteQuality
SIO_000300: 2.687105e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.85e-1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2798
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 1704
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variant carriers: 0

GenotypeQuality
all individuals: 2823
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.09e0

FS
type: SiteQuality
SIO_000300: 5.89e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

QD
type: SiteQuality
SIO_000300: 1.301e1

DP
type: SiteQuality
SIO_000300: 2.687105e6

MQ
type: SiteQuality
SIO_000300: 5.927e1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1972
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2668
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 2798
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.816860465116279e-4
allele num: 16512
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.993586862057598e-5
allele num: 66738
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.687767e6

QD
type: SiteQuality
SIO_000300: 1.452e1

MQRankSum
type: SiteQuality
SIO_000300: 7.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.73e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

FS
type: SiteQuality
SIO_000300: 2.159e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.81e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.87e0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495190146543199e-5
allele num: 66738
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.75e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.95e1

FS
type: SiteQuality
SIO_000300: 6.965e0

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 5.42e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.687556e6

VQSLOD
type: SiteQuality
SIO_000300: 4.64e-1

GenotypeQuality
all individuals: 9293
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1972
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3080
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 2.687471e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.19e-1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.269e1

MQRankSum
type: SiteQuality
SIO_000300: 1.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.75e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.566e0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.687528e6

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.949e1

FS
type: SiteQuality
SIO_000300: 3.798e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.706e0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Finnish)
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Latino
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East Asian
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European (Non-Finnish)
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Other
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QD
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InbreedingCoeff
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FS
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ClippingRankSum
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MQ
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DP
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MQRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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allele num: 66738
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Other
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African
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South Asian
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Latino
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QD
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BaseQRankSum
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InbreedingCoeff
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FS
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MQ
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MQRankSum
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VQSLOD
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ClippingRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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European (Finnish)
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Other
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Latino
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East Asian
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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MQ
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ReadPosRankSum
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FS
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DP
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MQRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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South Asian
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Other
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European (Finnish)
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Latino
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European (Non-Finnish)
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ReadPosRankSum
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MQ
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FS
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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QD
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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East Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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Other
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ReadPosRankSum
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MQRankSum
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DP
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VQSLOD
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BaseQRankSum
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FS
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QD
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MQ
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ClippingRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Non-Finnish)
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European (Finnish)
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East Asian
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South Asian
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Other
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QD
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MQRankSum
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DP
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FS
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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South Asian
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European (Non-Finnish)
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East Asian
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European (Finnish)
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QD
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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MQRankSum
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MQ
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FS
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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African
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South Asian
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Latino
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European (Non-Finnish)
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BaseQRankSum
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MQ
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VQSLOD
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DP
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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East Asian
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South Asian
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MQRankSum
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FS
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ClippingRankSum
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DP
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MQ
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.887e1

MQRankSum
type: SiteQuality
SIO_000300: 7.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.4e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.22e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.28e-1

DP
type: SiteQuality
SIO_000300: 2.699805e6

GenotypeQuality
all individuals: 9253
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2784
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2661
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1961
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2811
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36472
bin: 9.75e1
variant carriers: 12

East Asian
type: Population
allele count: 12
allele frequency: 1.386642015253062e-3
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.32e-1

QD
type: SiteQuality
SIO_000300: 1.22e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.28e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.887e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.97e-1

DP
type: SiteQuality
SIO_000300: 2.699805e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.4e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9254
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1700
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2811
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36473
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2782
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.993407252022775e-5
allele num: 66740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.874e1

VQSLOD
type: SiteQuality
SIO_000300: -2.253e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.15e-1

QD
type: SiteQuality
SIO_000300: 1.255e1

MQRankSum
type: SiteQuality
SIO_000300: 6.45e-1

FS
type: SiteQuality
SIO_000300: 5.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.09e-1

DP
type: SiteQuality
SIO_000300: 2.698174e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.47e0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36487
bin: 9.75e1
variant carriers: 32

GenotypeQuality
all individuals: 1699
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1959
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2809
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.047777441790142e-4
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 28
allele frequency: 4.195385076415942e-4
allele num: 66740
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.8e-2

FS
type: SiteQuality
SIO_000300: 5.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.59e-1

MQ
type: SiteQuality
SIO_000300: 5.883e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.84e0

DP
type: SiteQuality
SIO_000300: 2.703572e6

QD
type: SiteQuality
SIO_000300: 1.826e1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1699
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3060
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1959
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36455
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2783
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2809
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999220202747286e-5
allele num: 66684
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.8e0

VQSLOD
type: SiteQuality
SIO_000300: -2.222e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.704062e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.155e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.79e0

MQ
type: SiteQuality
SIO_000300: 5.845e1

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

QD
type: SiteQuality
SIO_000300: 1.261e1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2809
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1699
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36483
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2662
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3060
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2784
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1959
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.699078e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.26e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.252999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.499e1

FS
type: SiteQuality
SIO_000300: 4.114e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

MQ
type: SiteQuality
SIO_000300: 5.884e1

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2783
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1959
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1699
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2662
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9247
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.358e0

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.152e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.699126e6

VQSLOD
type: SiteQuality
SIO_000300: -2.125e0

MQ
type: SiteQuality
SIO_000300: 5.836e1

QD
type: SiteQuality
SIO_000300: 1.336e1