1-52205910-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52205910
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52205910
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 19582
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-177-5298C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-264-5298C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.319-5298C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-177-5298C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.28-5298C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.28-5298C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.28-5298C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-6472C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.373-5298C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.373-5298C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.387+27C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.178-5298C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-177-5298C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-177-5298C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.319-5298C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*36-5298C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.115-5298C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.78-5298C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.316-5298C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.268-5298C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*270-5298C>T
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

1-52211162-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211162
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211162
    reference: chr 1
allele count: 1
allele frequency: 1.137242414593095e-5
allele num: 87932
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-177-46C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.115-46C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*36-46C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.373-46C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.401C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.28-46C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.373-46C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-264-46C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.319-46C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.388-46C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.316-46C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-177-46C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.268-46C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1220C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.28-46C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.319-46C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-177-46C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-177-46C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*270-46C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.28-46C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-177-46C>T
  variant of: http://identifiers.org/hgnc/16386
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP

1-52211163-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211163
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211163
    reference: chr 1
allele count: 1142
allele frequency: 1.291738304225862e-2
allele num: 88408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.28-45T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.373-45T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.28-45T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.28-45T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-264-45T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-177-45T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.388-45T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.402T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1219T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-177-45T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.115-45T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*36-45T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.78-45T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*270-45T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-177-45T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-177-45T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.316-45T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.319-45T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.373-45T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-177-45T>A
  variant of: http://identifiers.org/hgnc/16386
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 13
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

1-52211164-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211164
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211164
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 88496
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-177-44T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.178-44T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-177-44T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.115-44T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.319-44T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.403T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.373-44T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-177-44T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.28-44T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.28-44T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.388-44T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.28-44T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-264-44T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.268-44T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.316-44T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.78-44T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1218T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*36-44T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.373-44T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-177-44T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-177-44T>A
  variant of: http://identifiers.org/hgnc/16386
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

1-52211164-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211164
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211164
    reference: chr 1
allele count: 2
allele frequency: 2.25998915205207e-5
allele num: 88496
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.373-44T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.78-44T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-177-44T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-177-44T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-177-44T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1218T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.373-44T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.316-44T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.268-44T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*36-44T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.28-44T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-177-44T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*270-44T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-177-44T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-264-44T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.28-44T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.403T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.319-44T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.388-44T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.115-44T>G
  variant of: http://identifiers.org/hgnc/16386
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

1-52211166-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211166
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211166
    reference: chr 1
allele count: 4
allele frequency: 4.525194017693509e-5
allele num: 88394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.28-42G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*36-42G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.405G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-264-42G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.78-42G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1216G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.373-42G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-177-42G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.178-42G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-177-42G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.316-42G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.28-42G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.388-42G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-177-42G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.319-42G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.373-42G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-177-42G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.28-42G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-177-42G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.115-42G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*270-42G>T
  variant of: http://identifiers.org/hgnc/16386
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-52211167-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211167
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211167
    reference: chr 1
allele count: 1
allele frequency: 1.129126959035274e-5
allele num: 88564
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.28-41C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-177-41C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-177-41C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.388-41C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.316-41C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1215C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-177-41C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.406C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*36-41C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-264-41C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.319-41C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*270-41C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.78-41C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.373-41C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-177-41C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-177-41C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.319-41C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.28-41C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.373-41C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-177-41C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.28-41C>T
  variant of: http://identifiers.org/hgnc/16386
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

1-52211187-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211187
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211187
    reference: chr 1
allele count: 3
allele frequency: 3.215916643440602e-5
allele num: 93286
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.28-21T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-177-21T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.373-21T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*270-21T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*36-21T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.373-21T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.388-21T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-177-21T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.426T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.178-21T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1195T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-264-21T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.28-21T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-177-21T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.78-21T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.115-21T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.268-21T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.28-21T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.319-21T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.319-21T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-177-21T>C
  variant of: http://identifiers.org/hgnc/16386
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

1-52211190-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211190
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211190
    reference: chr 1
allele count: 2261
allele frequency: 2.381604449313222e-2
allele num: 94936
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.319-18C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.28-18C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-177-18C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.388-18C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1192C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.28-18C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-177-18C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-177-18C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.115-18C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.78-18C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.316-18C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.28-18C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*36-18C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-177-18C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.429C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-177-18C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.319-18C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.373-18C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-264-18C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-177-18C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*270-18C>G
  variant of: http://identifiers.org/hgnc/16386
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 63
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

1-52211192-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211192
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211192
    reference: chr 1
allele count: 4
allele frequency: 4.167448063178513e-5
allele num: 95982
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-177-16A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.431A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-177-16A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.373-16A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*36-16A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.316-16A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.178-16A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.388-16A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1190A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-177-16A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.115-16A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.28-16A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-264-16A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.78-16A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.373-16A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.28-16A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.319-16A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*270-16A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-177-16A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.28-16A>G
  variant of: http://identifiers.org/hgnc/16386
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: A
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

1-52211195-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211195
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211195
    reference: chr 1
allele count: 1
allele frequency: 1.030141953561201e-5
allele num: 97074
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.28-13T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*270-13T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.268-13T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*36-13T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-264-13T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-177-13T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.373-13T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.319-13T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.316-13T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.28-13T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-177-13T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1187T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.388-13T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.319-13T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-177-13T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.434T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-177-13T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-177-13T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.28-13T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.178-13T>G
  variant of: http://identifiers.org/hgnc/16386
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

1-52211199-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211199
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211199
    reference: chr 1
allele count: 1
allele frequency: 1.010897474778108e-5
allele num: 98922
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-264-9T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*36-9T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-177-9T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.373-9T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.373-9T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.268-9T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.28-9T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.316-9T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*270-9T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-177-9T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-177-9T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.388-9T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.28-9T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.78-9T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-177-9T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-177-9T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.438T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.28-9T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.115-9T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-177-9T>A
  variant of: http://identifiers.org/hgnc/16386
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

1-52211200-TTCTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211200
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211196
    reference: chr 1
allele count: 1
allele frequency: 1.007962906965024e-5
allele num: 99210
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1180_-81-1177delCTCT
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-177-6_-177-3delCTCT
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.28-6_28-3delCTCT
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.28-6_28-3delCTCT
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.268-6_268-3delCTCT
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.319-6_319-3delCTCT
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.115-6_115-3delCTCT
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-177-6_-177-3delCTCT
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-177-6_-177-3delCTCT
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.373-6_373-3delCTCT
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.373-6_373-3delCTCT
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-177-6_-177-3delCTCT
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.388-6_388-3delCTCT
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-264-6_-264-3delCTCT
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.28-6_28-3delCTCT
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-177-6_-177-3delCTCT
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.316-6_316-3delCTCT
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.441_444delCTCT
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*270-6_*270-3delCTCT
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.388-6_388-3delCTCT
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: TTCTC
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP

1-52211202-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211202
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211202
    reference: chr 1
allele count: 1
allele frequency: 9.996801023672424e-6
allele num: 100032
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.373-6C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-177-6C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.78-6C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.316-6C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.28-6C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.28-6C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-177-6C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*36-6C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.441C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.388-6C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.28-6C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.319-6C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.268-6C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.373-6C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-177-6C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*270-6C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-177-6C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-264-6C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-177-6C>G
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.388-6C>G
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD

1-52211202-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211202
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211202
    reference: chr 1
allele count: 1
allele frequency: 9.996801023672424e-6
allele num: 100032
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-177-6C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.319-6C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.268-6C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-177-6C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1180C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-177-6C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.441C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.373-6C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.373-6C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-177-6C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.388-6C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-264-6C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.28-6C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.28-6C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.316-6C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.319-6C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-177-6C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.115-6C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*270-6C>T
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.388-6C>T
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD

1-52211204-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211204
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211204
    reference: chr 1
allele count: 6
allele frequency: 5.940358797671379e-5
allele num: 101004
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-177-4C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*36-4C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-177-4C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.316-4C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.319-4C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-177-4C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-177-4C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.319-4C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.373-4C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.373-4C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.115-4C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*270-4C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.28-4C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.388-4C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.268-4C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-177-4C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.28-4C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-177-4C>G
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.388-4C>G
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

1-52211217-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211217
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211217
    reference: chr 1
allele count: 1
allele frequency: 9.499563020101076e-6
allele num: 105268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.277T>A
  hgvsp: ENSP00000413263.1:p.Ser93Thr
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.37T>A
  hgvsp: ENSP00000435429.1:p.Ser13Thr
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.37T>A
  hgvsp: ENSP00000354970.5:p.Ser13Thr
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.124T>A
  hgvsp: ENSP00000433675.1:p.Ser42Thr
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.382T>A
  hgvsp: ENSP00000360775.3:p.Ser128Thr
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-255T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.382T>A
  hgvsp: ENSP00000337265.4:p.Ser128Thr
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.397T>A
  hgvsp: ENSP00000412733.1:p.Ser133Thr
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.37T>A
  hgvsp: ENSP00000431274.1:p.Ser13Thr
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*45T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.187T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.87T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*279T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.328T>A
  hgvsp: ENSP00000360779.1:p.Ser110Thr
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1165T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-168T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-168T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.328T>A
  hgvsp: ENSP00000407168.1:p.Ser110Thr
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.325T>A
  hgvsp: ENSP00000434798.1:p.Ser109Thr
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ser133Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP

1-52211229-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211229
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211229
    reference: chr 1
allele count: 6
allele frequency: 5.599417660563302e-5
allele num: 107154
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.136C>T
  hgvsp: ENSP00000433675.1:p.Pro46Ser
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.340C>T
  hgvsp: ENSP00000360779.1:p.Pro114Ser
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-156C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1153C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.337C>T
  hgvsp: ENSP00000434798.1:p.Pro113Ser
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.394C>T
  hgvsp: ENSP00000337265.4:p.Pro132Ser
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.409C>T
  hgvsp: ENSP00000412733.1:p.Pro137Ser
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*57C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-156C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.49C>T
  hgvsp: ENSP00000354970.5:p.Pro17Ser
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-156C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.49C>T
  hgvsp: ENSP00000431274.1:p.Pro17Ser
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-156C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.340C>T
  hgvsp: ENSP00000407168.1:p.Pro114Ser
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.394C>T
  hgvsp: ENSP00000360775.3:p.Pro132Ser
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.289C>T
  hgvsp: ENSP00000413263.1:p.Pro97Ser
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-156C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-156C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.99C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-243C>T
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro137Ser
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP

1-52211239-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211239
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211239
    reference: chr 1
allele count: 2
allele frequency: 1.846381093057607e-5
allele num: 108320
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-146A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.59A>G
  hgvsp: ENSP00000435429.1:p.Gln20Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.478A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.419A>G
  hgvsp: ENSP00000412733.1:p.Gln140Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-146A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1143A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*301A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-146A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.347A>G
  hgvsp: ENSP00000434798.1:p.Gln116Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-146A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*67A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.299A>G
  hgvsp: ENSP00000413263.1:p.Gln100Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.350A>G
  hgvsp: ENSP00000360779.1:p.Gln117Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.59A>G
  hgvsp: ENSP00000354970.5:p.Gln20Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.404A>G
  hgvsp: ENSP00000360775.3:p.Gln135Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.350A>G
  hgvsp: ENSP00000407168.1:p.Gln117Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.404A>G
  hgvsp: ENSP00000337265.4:p.Gln135Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.59A>G
  hgvsp: ENSP00000431274.1:p.Gln20Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.109A>G
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Gln140Arg
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: A
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

1-52211243-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211243
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211243
    reference: chr 1
allele count: 1
allele frequency: 9.201494322678003e-6
allele num: 108678
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.63T>C
  hgvsp: ENST00000526917.1:c.63T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.354T>C
  hgvsp: ENST00000428468.1:c.354T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-142T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.213T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.408T>C
  hgvsp: ENST00000371710.3:c.408T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.303T>C
  hgvsp: ENST00000453295.1:c.303T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.63T>C
  hgvsp: ENST00000361556.5:c.63T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.63T>C
  hgvsp: ENST00000533884.1:c.63T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-142T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-142T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.423T>C
  hgvsp: ENST00000447887.1:c.423T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.482T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.354T>C
  hgvsp: ENST00000371714.1:c.354T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.351T>C
  hgvsp: ENST00000489990.1:c.351T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-142T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.408T>C
  hgvsp: ENST00000337809.4:c.408T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1139T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.113T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.150T>C
  hgvsp: ENST00000530544.1:c.150T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Asp141Asp
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

1-52211260-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211260
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211260
    reference: chr 1
allele count: 1
allele frequency: 9.247956201679429e-6
allele num: 108132
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.130C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.368C>G
  hgvsp: ENSP00000434798.1:p.Thr123Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-125C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.320C>G
  hgvsp: ENSP00000413263.1:p.Thr107Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.425C>G
  hgvsp: ENSP00000360775.3:p.Thr142Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.499C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.440C>G
  hgvsp: ENSP00000412733.1:p.Thr147Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-125C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.425C>G
  hgvsp: ENSP00000337265.4:p.Thr142Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.80C>G
  hgvsp: ENSP00000431274.1:p.Thr27Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-125C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.230C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.80C>G
  hgvsp: ENSP00000354970.5:p.Thr27Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.167C>G
  hgvsp: ENSP00000433675.1:p.Thr56Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-212C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*322C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.80C>G
  hgvsp: ENSP00000435429.1:p.Thr27Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-125C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1122C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.371C>G
  hgvsp: ENSP00000407168.1:p.Thr124Arg
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Thr147Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP

1-52211264-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211264
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211264
    reference: chr 1
allele count: 1
allele frequency: 9.306134603930912e-6
allele num: 107456
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.134A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.84A>G
  hgvsp: ENST00000526917.1:c.84A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.429A>G
  hgvsp: ENST00000371710.3:c.429A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.84A>G
  hgvsp: ENST00000533884.1:c.84A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-121A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-121A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-121A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.372A>G
  hgvsp: ENST00000489990.1:c.372A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.324A>G
  hgvsp: ENST00000453295.1:c.324A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.84A>G
  hgvsp: ENST00000361556.5:c.84A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.429A>G
  hgvsp: ENST00000337809.4:c.429A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1118A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-121A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-121A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.375A>G
  hgvsp: ENST00000428468.1:c.375A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.444A>G
  hgvsp: ENST00000447887.1:c.444A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-121A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*326A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.375A>G
  hgvsp: ENST00000371714.1:c.375A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Glu148Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD

1-52211277-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211277
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211277
    reference: chr 1
allele count: 22
allele frequency: 2.112297411475536e-4
allele num: 104152
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.442C>T
  hgvsp: ENST00000371710.3:c.442C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.388C>T
  hgvsp: ENST00000428468.1:c.388C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.516C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.97C>T
  hgvsp: ENST00000533884.1:c.97C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.385C>T
  hgvsp: ENST00000489990.1:c.385C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.9C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.147C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.457C>T
  hgvsp: ENST00000447887.1:c.457C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.337C>T
  hgvsp: ENST00000453295.1:c.337C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-108C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-108C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-108C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*339C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-195C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-108C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.97C>T
  hgvsp: ENST00000526917.1:c.97C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*105C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-108C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.442C>T
  hgvsp: ENST00000337809.4:c.442C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.388C>T
  hgvsp: ENST00000371714.1:c.388C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Leu153Leu
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-52211283-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211283
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211283
    reference: chr 1
allele count: 1
allele frequency: 9.812772304431448e-6
allele num: 101908
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.463A>G
  hgvsp: ENSP00000412733.1:p.Ile155Val
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*345A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.190A>G
  hgvsp: ENSP00000433675.1:p.Ile64Val
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-102A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.394A>G
  hgvsp: ENSP00000360779.1:p.Ile132Val
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.522A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.391A>G
  hgvsp: ENSP00000434798.1:p.Ile131Val
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.103A>G
  hgvsp: ENSP00000435429.1:p.Ile35Val
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.15A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.394A>G
  hgvsp: ENSP00000407168.1:p.Ile132Val
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.253A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.448A>G
  hgvsp: ENSP00000360775.3:p.Ile150Val
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-102A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.448A>G
  hgvsp: ENSP00000337265.4:p.Ile150Val
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.103A>G
  hgvsp: ENSP00000431274.1:p.Ile35Val
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-189A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.343A>G
  hgvsp: ENSP00000413263.1:p.Ile115Val
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.153A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-102A>G
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ile155Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

1-52211292-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211292
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211292
    reference: chr 1
allele count: 2
allele frequency: 2.027451695963344e-5
allele num: 98646
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.24G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.400G>C
  hgvsp: ENSP00000434798.1:p.Glu134Gln
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.403G>C
  hgvsp: ENSP00000360779.1:p.Glu135Gln
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.199G>C
  hgvsp: ENSP00000433675.1:p.Glu67Gln
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.531G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.457G>C
  hgvsp: ENSP00000337265.4:p.Glu153Gln
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.472G>C
  hgvsp: ENSP00000412733.1:p.Glu158Gln
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.262G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.112G>C
  hgvsp: ENSP00000435429.1:p.Glu38Gln
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.112G>C
  hgvsp: ENSP00000431274.1:p.Glu38Gln
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.352G>C
  hgvsp: ENSP00000413263.1:p.Glu118Gln
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.112G>C
  hgvsp: ENSP00000354970.5:p.Glu38Gln
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-93G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-93G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.403G>C
  hgvsp: ENSP00000407168.1:p.Glu135Gln
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-180G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-93G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.457G>C
  hgvsp: ENSP00000360775.3:p.Glu153Gln
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-93G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-93G>C
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Glu158Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

1-52211302-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211302
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211302
    reference: chr 1
allele count: 1
allele frequency: 1.078492698604431e-5
allele num: 92722
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.122A>G
  hgvsp: ENSP00000431274.1:p.Lys41Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.410A>G
  hgvsp: ENSP00000434798.1:p.Lys137Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.122A>G
  hgvsp: ENSP00000435429.1:p.Lys41Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.209A>G
  hgvsp: ENSP00000433675.1:p.Lys70Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-170A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.482A>G
  hgvsp: ENSP00000412733.1:p.Lys161Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-83A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.467A>G
  hgvsp: ENSP00000360775.3:p.Lys156Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.172A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.467A>G
  hgvsp: ENSP00000337265.4:p.Lys156Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*364A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-83A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.122A>G
  hgvsp: ENSP00000354970.5:p.Lys41Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.362A>G
  hgvsp: ENSP00000413263.1:p.Lys121Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-83A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.413A>G
  hgvsp: ENSP00000407168.1:p.Lys138Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-83A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.541A>G
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Lys161Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP

1-52211315-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211315
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211315
    reference: chr 1
allele count: 1
allele frequency: 1.407221862598857e-5
allele num: 71062
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.123+12G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.363+12G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.414+12G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.542+12G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1067G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.173+12G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.210+12G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.123+12G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.468+12G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-82+12G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*131+12G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.483+12G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-82+12G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.414+12G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-82+12G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*365+12G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-169+12G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.35+12G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-82+12G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-82+12G>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-82+12G>C
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD

1-52211325-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211325
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211326
    reference: chr 1
allele count: 1
allele frequency: 3.215640877226831e-5
allele num: 31098
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-82+25dupA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.363+25dupA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.542+25dupA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-169+25dupA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.210+25dupA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.483+25dupA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.123+25dupA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.411+25dupA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.123+25dupA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.414+25dupA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.173+25dupA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-82+25dupA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1054dupA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.123+25dupA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-82+25dupA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.468+25dupA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.414+25dupA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.273+25dupA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*365+25dupA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*131+25dupA
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

1-52211326-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211326
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211326
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 31212
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.210+23A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-82+23A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-82+23A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.542+23A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.414+23A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.123+23A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.468+23A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-169+23A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-82+23A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-82+23A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.123+23A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.363+23A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-82+23A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.483+23A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.411+23A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*131+23A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1056A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.123+23A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-82+23A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.35+23A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.414+23A>G
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD

1-52211332-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211332
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211332
    reference: chr 1
allele count: 1
allele frequency: 3.614544928793465e-5
allele num: 27666
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.414+29A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.123+29A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*365+29A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.123+29A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-169+29A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.173+29A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*131+29A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.468+29A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.542+29A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.411+29A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.123+29A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.483+29A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.468+29A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.363+29A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-82+29A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-82+29A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.414+29A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-82+29A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.273+29A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.35+29A>G
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ

1-52211334-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52211334
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52211334
    reference: chr 1
allele count: 1
allele frequency: 3.909304143862392e-5
allele num: 25580
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.363+31A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*131+31A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.123+31A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.35+31A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.123+31A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-82+31A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-82+31A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-82+31A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.123+31A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.210+31A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.173+31A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.542+31A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.411+31A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-82+31A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.483+31A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-1048A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.414+31A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-169+31A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-82+31A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-82+31A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.468+31A>G
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP

1-52212333-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212333
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212333
    reference: chr 1
allele count: 1
allele frequency: 8.330001332800213e-6
allele num: 120048
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.124-49C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.364-49C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-81-49C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-81-49C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.124-49C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.124-49C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.415-49C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.543-49C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.469-49C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.36-49C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*366-49C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.415-49C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-81-49C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.484-49C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-81-49C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.412-49C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.469-49C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-168-49C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*132-49C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-81-49C>T
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

1-52212334-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212334
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212334
    reference: chr 1
allele count: 4
allele frequency: 3.329892444474044e-5
allele num: 120124
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.543-48G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-81-48G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-81-48G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.364-48G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-81-48G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.124-48G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.415-48G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*132-48G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-81-48G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-168-48G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-81-48G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.469-48G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*366-48G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.124-48G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.412-48G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.211-48G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.469-48G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.484-48G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.124-48G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.174-48G>A
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

1-52212340-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212340
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212340
    reference: chr 1
allele count: 1
allele frequency: 8.319744417451495e-6
allele num: 120196
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.543-42T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*366-42T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-81-42T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.412-42T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.415-42T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.124-42T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.415-42T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.469-42T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.364-42T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.469-42T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-81-42T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-81-42T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.211-42T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.124-42T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.484-42T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.36-42T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.174-42T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.274-42T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-81-42T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-168-42T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-42T>G
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD

1-52212340-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212340
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212339
    reference: chr 1
allele count: 1
allele frequency: 8.319744417451495e-6
allele num: 120196
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.469-39delA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-81-39delA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-81-39delA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.274-39delA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.415-39delA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-168-39delA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.211-39delA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.36-39delA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.484-39delA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.469-39delA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.124-39delA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*132-39delA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.124-39delA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-39delA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-81-39delA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-81-39delA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.543-39delA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-81-39delA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.364-39delA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*366-39delA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.412-39delA
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: TA
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

1-52212341-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212341
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212341
    reference: chr 1
allele count: 12
allele frequency: 9.981700216270171e-5
allele num: 120220
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.543-41A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.124-41A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.124-41A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-168-41A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.412-41A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-81-41A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.415-41A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-81-41A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.469-41A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.124-41A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*132-41A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.469-41A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.211-41A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.274-41A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.415-41A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.484-41A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.364-41A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*366-41A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.36-41A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.174-41A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-41A>G
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

1-52212345-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212345
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212345
    reference: chr 1
allele count: 6
allele frequency: 4.988360492184902e-5
allele num: 120280
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-37T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.415-37T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.415-37T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.484-37T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.36-37T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-81-37T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.412-37T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.274-37T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.211-37T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.364-37T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.469-37T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*132-37T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.124-37T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.543-37T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-81-37T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.124-37T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.469-37T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-168-37T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-81-37T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-81-37T>C
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.124-37T>C
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

1-52212351-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212351
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212351
    reference: chr 1
allele count: 1
allele frequency: 8.327642777435419e-6
allele num: 120082
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-81-31G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-81-31G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.469-31G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.469-31G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.124-31G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-168-31G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.412-31G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*366-31G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.543-31G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.415-31G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.174-31G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-31G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.124-31G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.36-31G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-81-31G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.364-31G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*132-31G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.484-31G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.274-31G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-81-31G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.415-31G>A
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/1-52212361-C-CAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212361
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212363
    reference: chr 1
allele count: 1
allele frequency: 8.302337938363443e-6
allele num: 120448
alternate allele: CAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-81-21_-81-20insAA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.36-21_36-20insAA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.364-21_364-20insAA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.469-21_469-20insAA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.484-21_484-20insAA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-168-21_-168-20insAA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.211-21_211-20insAA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*132-21_*132-20insAA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-81-21_-81-20insAA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.469-21_469-20insAA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*366-21_*366-20insAA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.543-21_543-20insAA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-81-21_-81-20insAA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.124-21_124-20insAA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-21_-81-20insAA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.412-21_412-20insAA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-81-21_-81-20insAA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-81-21_-81-20insAA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.415-21_415-20insAA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.124-21_124-20insAA
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-81-21_-81-20insAA
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

1-52212362-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212362
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212362
    reference: chr 1
allele count: 1
allele frequency: 8.294900295298451e-6
allele num: 120556
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.543-20C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-20C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.174-20C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*366-20C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-81-20C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.415-20C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.124-20C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-168-20C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-81-20C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-81-20C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-81-20C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.484-20C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.469-20C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.274-20C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.364-20C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-81-20C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.415-20C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.211-20C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-81-20C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*132-20C>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.36-20C>G
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

1-52212369-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212369
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212369
    reference: chr 1
allele count: 3
allele frequency: 2.484801298722812e-5
allele num: 120734
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-81-13T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*132-13T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.543-13T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.364-13T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*366-13T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.124-13T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.412-13T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-81-13T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.174-13T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-81-13T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.469-13T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-81-13T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.469-13T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.484-13T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.415-13T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.415-13T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.274-13T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.36-13T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-13T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.211-13T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-81-13T>A
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

1-52212377-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212377
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212377
    reference: chr 1
allele count: 1
allele frequency: 8.270204108637402e-6
allele num: 120916
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.469-5T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-5T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.412-5T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.415-5T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*132-5T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-81-5T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.36-5T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-81-5T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-81-5T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.484-5T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-81-5T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.124-5T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.469-5T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.124-5T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-81-5T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.174-5T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.543-5T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-168-5T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.364-5T>G
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.484-5T>G
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

1-52212378-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212378
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212378
    reference: chr 1
allele count: 2
allele frequency: 1.653821982601793e-5
allele num: 120932
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-81-4G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*132-4G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.469-4G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.174-4G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.484-4G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-81-4G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.543-4G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.124-4G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-81-4G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.274-4G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.124-4G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.469-4G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.36-4G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.412-4G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.364-4G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-81-4G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*366-4G>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.415-4G>T
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.484-4G>T
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

1-52212382-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212382
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212382
    reference: chr 1
allele count: 1
allele frequency: 8.266375690242371e-6
allele num: 120972
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.412C>T
  hgvsp: ENSP00000434798.1:p.Leu138Phe
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-81C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-81C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.415C>T
  hgvsp: ENSP00000407168.1:p.Leu139Phe
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-168C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*132C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.469C>T
  hgvsp: ENSP00000360775.3:p.Leu157Phe
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.543C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.36C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.124C>T
  hgvsp: ENSP00000354970.5:p.Leu42Phe
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.484C>T
  hgvsp: ENSP00000412733.1:p.Leu162Phe
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.415C>T
  hgvsp: ENSP00000360779.1:p.Leu139Phe
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.469C>T
  hgvsp: ENSP00000337265.4:p.Leu157Phe
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.364C>T
  hgvsp: ENSP00000413263.1:p.Leu122Phe
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-81C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-81C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.124C>T
  hgvsp: ENSP00000431274.1:p.Leu42Phe
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*366C>T
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Leu162Phe
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD

1-52212384-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212384
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212384
    reference: chr 1
allele count: 1
allele frequency: 8.265282507356101e-6
allele num: 120988
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.276T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-79T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.176T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.126T>A
  hgvsp: ENST00000533884.1:c.126T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*134T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-79T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-79T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-79T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.471T>A
  hgvsp: ENST00000337809.4:c.471T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.38T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.126T>A
  hgvsp: ENST00000526917.1:c.126T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.366T>A
  hgvsp: ENST00000453295.1:c.366T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-79T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.486T>A
  hgvsp: ENST00000447887.1:c.486T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-166T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-79T>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.414T>A
  hgvsp: ENST00000489990.1:c.414T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.545T>A
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.486T>A
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

1-52212387-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212387
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212387
    reference: chr 1
allele count: 15
allele frequency: 1.239382622203127e-4
allele num: 121028
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-76T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*371T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.129T>G
  hgvsp: ENSP00000431274.1:p.Phe43Leu
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-76T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.420T>G
  hgvsp: ENSP00000407168.1:p.Phe140Leu
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.129T>G
  hgvsp: ENSP00000435429.1:p.Phe43Leu
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.369T>G
  hgvsp: ENSP00000413263.1:p.Phe123Leu
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.489T>G
  hgvsp: ENSP00000412733.1:p.Phe163Leu
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-163T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.129T>G
  hgvsp: ENSP00000354970.5:p.Phe43Leu
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-76T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.474T>G
  hgvsp: ENSP00000337265.4:p.Phe158Leu
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.279T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-76T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.216T>G
  hgvsp: ENSP00000433675.1:p.Phe72Leu
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.420T>G
  hgvsp: ENSP00000360779.1:p.Phe140Leu
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-76T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.41T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.474T>G
  hgvsp: ENSP00000360775.3:p.Phe158Leu
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.417T>G
  hgvsp: ENSP00000434798.1:p.Phe139Leu
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Phe163Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

1-52212418-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212418
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212418
    reference: chr 1
allele count: 1
allele frequency: 8.256274768824306e-6
allele num: 121120
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.400G>A
  hgvsp: ENSP00000413263.1:p.Glu134Lys
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.247G>A
  hgvsp: ENSP00000433675.1:p.Glu83Lys
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*402G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.505G>A
  hgvsp: ENSP00000360775.3:p.Glu169Lys
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-45G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-45G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.160G>A
  hgvsp: ENSP00000435429.1:p.Glu54Lys
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-45G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.448G>A
  hgvsp: ENSP00000434798.1:p.Glu150Lys
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.210G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-45G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.310G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.579G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.451G>A
  hgvsp: ENSP00000360779.1:p.Glu151Lys
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.160G>A
  hgvsp: ENSP00000354970.5:p.Glu54Lys
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.520G>A
  hgvsp: ENSP00000412733.1:p.Glu174Lys
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.505G>A
  hgvsp: ENSP00000337265.4:p.Glu169Lys
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-45G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-132G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.160G>A
  hgvsp: ENSP00000431274.1:p.Glu54Lys
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Glu174Lys
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

1-52212428-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212428
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212428
    reference: chr 1
allele count: 1
allele frequency: 8.258729477057249e-6
allele num: 121084
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.530A>G
  hgvsp: ENSP00000412733.1:p.Lys177Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.458A>G
  hgvsp: ENSP00000434798.1:p.Lys153Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.515A>G
  hgvsp: ENSP00000337265.4:p.Lys172Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.461A>G
  hgvsp: ENSP00000360779.1:p.Lys154Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*412A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*178A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.515A>G
  hgvsp: ENSP00000360775.3:p.Lys172Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.170A>G
  hgvsp: ENSP00000435429.1:p.Lys57Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.170A>G
  hgvsp: ENSP00000354970.5:p.Lys57Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-35A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-122A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.170A>G
  hgvsp: ENSP00000431274.1:p.Lys57Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.410A>G
  hgvsp: ENSP00000413263.1:p.Lys137Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-35A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-35A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.461A>G
  hgvsp: ENSP00000407168.1:p.Lys154Arg
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.589A>G
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Lys177Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

1-52212432-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212432
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212432
    reference: chr 1
allele count: 2
allele frequency: 1.652373634726284e-5
allele num: 121038
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.221+3A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-34+3A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.590+3A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-34+3A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.83+3A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-34+3A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-34+3A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.516+3A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.462+3A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*413+3A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-34+3A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.171+3A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.171+3A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.459+3A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*179+3A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-121+3A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.171+3A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.321+3A>G
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.531+3A>G
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

1-52212439-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212439
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212439
    reference: chr 1
allele count: 1
allele frequency: 8.266239026567692e-6
allele num: 120974
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.516+10A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.531+10A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.258+10A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-34+10A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*179+10A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-34+10A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-34+10A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.321+10A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.459+10A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.171+10A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-121+10A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.462+10A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.590+10A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.171+10A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.411+10A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.221+10A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*413+10A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.83+10A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.171+10A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.462+10A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-34+10A>G
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff

1-52212443-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212443
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212443
    reference: chr 1
allele count: 1
allele frequency: 8.272256506129742e-6
allele num: 120886
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.459+14C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-34+14C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.411+14C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.462+14C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.590+14C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-34+14C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*179+14C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.171+14C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.258+14C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-34+14C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.516+14C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.83+14C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.462+14C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.171+14C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*413+14C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-34+14C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.171+14C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-121+14C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-34+14C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.531+14C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.321+14C>T
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-52212448-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212448
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212448
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 120698
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.171+19C>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.462+19C>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.516+19C>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.531+19C>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-34+19C>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.171+19C>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-34+19C>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-34+19C>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.516+19C>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.411+19C>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.459+19C>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*179+19C>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.590+19C>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.258+19C>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.462+19C>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-121+19C>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-34+19C>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.221+19C>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.171+19C>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-34+19C>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-34+19C>A
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-52212452-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212452
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212452
    reference: chr 1
allele count: 1
allele frequency: 8.2917364554485e-6
allele num: 120602
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*179+23T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.411+23T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-121+23T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-34+23T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-34+23T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.171+23T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.531+23T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.321+23T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.516+23T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.590+23T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.459+23T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.462+23T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.258+23T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.171+23T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.221+23T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-34+23T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-34+23T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.516+23T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-34+23T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-34+23T>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.462+23T>G
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

1-52212454-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212454
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212454
    reference: chr 1
allele count: 1
allele frequency: 8.295175525914129e-6
allele num: 120552
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.516+25A>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.171+25A>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-34+25A>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-34+25A>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.531+25A>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-34+25A>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.258+25A>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.221+25A>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*179+25A>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.171+25A>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.83+25A>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.462+25A>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-121+25A>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.171+25A>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-34+25A>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.459+25A>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*413+25A>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.411+25A>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.590+25A>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.516+25A>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.321+25A>T
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

1-52212455-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212455
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212455
    reference: chr 1
allele count: 3
allele frequency: 2.49003984063745e-5
allele num: 120480
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-34+26C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.171+26C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431274
  ensembl transcript: ENST00000533884
  gene symbol: OSBPL9
  hgvsc: ENST00000533884.1:c.171+26C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-34+26C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.411+26C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433279
  ensembl transcript: ENST00000462759
  gene symbol: OSBPL9
  hgvsc: ENST00000462759.1:c.-34+26C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.462+26C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-34+26C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.590+26C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.531+26C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.83+26C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.321+26C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.459+26C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*179+26C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.516+26C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-34+26C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-34+26C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.516+26C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.221+26C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*413+26C>T
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-34+26C>T
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD

1-52212456-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212456
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212456
    reference: chr 1
allele count: 1
allele frequency: 8.300270588821196e-6
allele num: 120478
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-34+27G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.462+27G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*179+27G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.531+27G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.171+27G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000467064
  gene symbol: OSBPL9
  hgvsc: ENST00000467064.1:n.590+27G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-34+27G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.462+27G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-34+27G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.516+27G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-34+27G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000431980
  ensembl transcript: ENST00000486942
  gene symbol: OSBPL9
  hgvsc: ENST00000486942.1:c.-34+27G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.171+27G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.411+27G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.459+27G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-121+27G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*413+27G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.321+27G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-34+27G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.83+27G>A
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.258+27G>A
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ

1-52212459-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212459
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212459
    reference: chr 1
allele count: 1
allele frequency: 8.305509875251242e-6
allele num: 120402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000524620
  gene symbol: OSBPL9
  hgvsc: ENST00000524620.1:n.83+30A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435129
  ensembl transcript: ENST00000527631
  gene symbol: OSBPL9
  hgvsc: ENST00000527631.1:c.-34+30A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433675
  ensembl transcript: ENST00000530544
  gene symbol: OSBPL9
  hgvsc: ENST00000530544.1:c.258+30A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360775
  ensembl transcript: ENST00000371710
  gene symbol: OSBPL9
  hgvsc: ENST00000371710.3:c.516+30A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000360779
  ensembl transcript: ENST00000371714
  gene symbol: OSBPL9
  hgvsc: ENST00000371714.1:c.462+30A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000412733
  ensembl transcript: ENST00000447887
  gene symbol: OSBPL9
  hgvsc: ENST00000447887.1:c.531+30A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000434798
  ensembl transcript: ENST00000489990
  gene symbol: OSBPL9
  hgvsc: ENST00000489990.1:c.459+30A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000484890
  gene symbol: OSBPL9
  hgvsc: ENST00000484890.1:n.221+30A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000433083
  ensembl transcript: ENST00000531828
  gene symbol: OSBPL9
  hgvsc: ENST00000531828.1:c.-34+30A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000402646
  ensembl transcript: ENST00000435686
  gene symbol: OSBPL9
  hgvsc: ENST00000435686.2:c.-34+30A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000390113
  ensembl transcript: ENST00000435274
  gene symbol: OSBPL9
  hgvsc: ENST00000435274.2:c.*413+30A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000413263
  ensembl transcript: ENST00000453295
  gene symbol: OSBPL9
  hgvsc: ENST00000453295.1:c.411+30A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.516+30A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435264
  ensembl transcript: ENST00000495776
  gene symbol: OSBPL9
  hgvsc: ENST00000495776.1:c.*179+30A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435247
  ensembl transcript: ENST00000481937
  gene symbol: OSBPL9
  hgvsc: ENST00000481937.1:c.-121+30A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435627
  ensembl transcript: ENST00000534040
  gene symbol: OSBPL9
  hgvsc: ENST00000534040.1:c.-34+30A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000435429
  ensembl transcript: ENST00000526917
  gene symbol: OSBPL9
  hgvsc: ENST00000526917.1:c.171+30A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000354970
  ensembl transcript: ENST00000361556
  gene symbol: OSBPL9
  hgvsc: ENST00000361556.5:c.171+30A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000432801
  ensembl transcript: ENST00000532975
  gene symbol: OSBPL9
  hgvsc: ENST00000532975.1:c.-34+30A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000407168
  ensembl transcript: ENST00000428468
  gene symbol: OSBPL9
  hgvsc: ENST00000428468.1:c.462+30A>G
  variant of: http://identifiers.org/hgnc/16386
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl transcript: ENST00000473207
  gene symbol: OSBPL9
  hgvsc: ENST00000473207.2:n.321+30A>G
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum

1-52212466-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52212466
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 52212466
    reference: chr 1
allele count: 1
allele frequency: 8.312137383006666e-6
allele num: 120306
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000117859
  ensembl protein: ENSP00000337265
  ensembl transcript: ENST00000337809
  gene symbol: OSBPL9
  hgvsc: ENST00000337809.4:c.516+37T>C
  variant of: http://identifiers.org/hgnc/16386
canonical: true
consequence: intron
filter: PASS
num of homozygotes: 0
reference allele: T

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435627
ensembl transcript: ENST00000534040
gene symbol: OSBPL9
hgvsc: ENST00000534040.1:c.-177-5298C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433279
ensembl transcript: ENST00000462759
gene symbol: OSBPL9
hgvsc: ENST00000462759.1:c.-177-5298C>T
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 105
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 161
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 337
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 277
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1298
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2588
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 874
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1080
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 243
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1029
bin: 2.5e0
variant carriers: 1

GenotypeDepth
all individuals: 760
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 117
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 70
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 279
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 90
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1682
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 174
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 355
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2250
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1665
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3680
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 817
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 899
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2174
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6054
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.51e-1

FS
type: SiteQuality
SIO_000300: 6.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.701e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.67e-1

DP
type: SiteQuality
SIO_000300: 5.14114e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.71e-2

QD
type: SiteQuality
SIO_000300: 1.154e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.178-46C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000484890
gene symbol: OSBPL9
hgvsc: ENST00000484890.1:n.78-46C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433083
ensembl transcript: ENST00000531828
gene symbol: OSBPL9
hgvsc: ENST00000531828.1:c.-177-46C>T
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 14813
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2637
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 490
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 178
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 958
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2505
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7449
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 59
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13895
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 144
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 73
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 535
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 303
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8932
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6857
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14339
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5236
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1446
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3324
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1464
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2183
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6218
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1790
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2332
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3870
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11116
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2664
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2059
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 1.173984503404555e-4
allele num: 8518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44338
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8270
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13656
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7092
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.589e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

QD
type: SiteQuality
SIO_000300: 1.192e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.501e0

DP
type: SiteQuality
SIO_000300: 1.111658e6

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.178-45T>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433279
ensembl transcript: ENST00000462759
gene symbol: OSBPL9
hgvsc: ENST00000462759.1:c.-177-45T>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000413263
ensembl transcript: ENST00000453295
gene symbol: OSBPL9
hgvsc: ENST00000453295.1:c.268-45T>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000407168
ensembl transcript: ENST00000428468
gene symbol: OSBPL9
hgvsc: ENST00000428468.1:c.319-45T>A
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 197
bin: 5.75e1
variant carriers: 16

GenotypeDepth
all individuals: 67
bin: 7.75e1
variant carriers: 2

GenotypeDepth
all individuals: 142
bin: 6.75e1
variant carriers: 4

GenotypeDepth
all individuals: 308
bin: 5.25e1
variant carriers: 17

GenotypeDepth
all individuals: 2399
bin: 2.5e0
variant carriers: 8

GenotypeDepth
all individuals: 948
bin: 3.75e1
variant carriers: 31

GenotypeDepth
all individuals: 14777
bin: 1.25e1
variant carriers: 329

GenotypeDepth
all individuals: 424
bin: 4.75e1
variant carriers: 32

GenotypeDepth
all individuals: 2651
bin: 3.25e1
variant carriers: 53

GenotypeDepth
all individuals: 60
bin: 8.75e1
variant carriers: 4

GenotypeDepth
all individuals: 71
bin: 8.25e1
variant carriers: 5

GenotypeDepth
all individuals: 58
bin: 9.25e1
variant carriers: 3

GenotypeDepth
all individuals: 9382
bin: 2.25e1
variant carriers: 156

GenotypeDepth
all individuals: 184
bin: 6.25e1
variant carriers: 14

GenotypeDepth
all individuals: 7039
bin: 1.75e1
variant carriers: 234

GenotypeDepth
all individuals: 13867
bin: 7.5e0
variant carriers: 165

GenotypeDepth
all individuals: 6951
bin: 2.75e1
variant carriers: 100

GenotypeDepth
all individuals: 108
bin: 7.25e1
variant carriers: 4

GenotypeDepth
all individuals: 496
bin: 9.75e1
variant carriers: 99

GenotypeDepth
all individuals: 532
bin: 4.25e1
variant carriers: 28

GenotypeQuality
all individuals: 11075
bin: 2.25e1
variant carriers: 14

GenotypeQuality
all individuals: 2661
bin: 6.75e1
variant carriers: 5

GenotypeQuality
all individuals: 663
bin: 7.75e1
variant carriers: 10

GenotypeQuality
all individuals: 1342
bin: 1.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2937
bin: 9.75e1
variant carriers: 1117

GenotypeQuality
all individuals: 3782
bin: 2.75e1
variant carriers: 4

GenotypeQuality
all individuals: 280
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 459
bin: 5.75e1
variant carriers: 10

GenotypeQuality
all individuals: 1276
bin: 5.25e1
variant carriers: 11

GenotypeQuality
all individuals: 2220
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 378
bin: 8.25e1
variant carriers: 27

GenotypeQuality
all individuals: 2057
bin: 1.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1702
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 6073
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 14585
bin: 6.25e1
variant carriers: 8

GenotypeQuality
all individuals: 198
bin: 8.75e1
variant carriers: 35

GenotypeQuality
all individuals: 240
bin: 9.25e1
variant carriers: 33

GenotypeQuality
all individuals: 5075
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 622
bin: 7.25e1
variant carriers: 5

GenotypeQuality
all individuals: 3036
bin: 4.75e1
variant carriers: 8

Other
type: Population
allele count: 5
allele frequency: 7.163323782234957e-3
allele num: 698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7102
num of homozygotes: 0

African
type: Population
allele count: 398
allele frequency: 4.785954785954786e-2
allele num: 8316
num of homozygotes: 9

South Asian
type: Population
allele count: 94
allele frequency: 6.866325785244704e-3
allele num: 13690
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 582
allele frequency: 1.303705031136598e-2
allele num: 44642
num of homozygotes: 3

European (Finnish)
type: Population
allele count: 5
allele frequency: 9.293680297397769e-4
allele num: 5380
num of homozygotes: 0

Latino
type: Population
allele count: 58
allele frequency: 6.75990675990676e-3
allele num: 8580
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.26e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.36e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.119733e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.36e-1

QD
type: SiteQuality
SIO_000300: 1.514e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.2e0

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433279
ensembl transcript: ENST00000462759
gene symbol: OSBPL9
hgvsc: ENST00000462759.1:c.-177-44T>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000390113
ensembl transcript: ENST00000435274
gene symbol: OSBPL9
hgvsc: ENST00000435274.2:c.*270-44T>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000360779
ensembl transcript: ENST00000371714
gene symbol: OSBPL9
hgvsc: ENST00000371714.1:c.319-44T>A
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 7062
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13898
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 67
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 69
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2681
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 175
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2355
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 950
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9910
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 304
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14699
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 187
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 408
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6607
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 146
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 520
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 408
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1692
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1153
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11547
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3834
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1854
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2208
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6181
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2740
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5150
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1310
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2912
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15640
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 679
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1881
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7096
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13696
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44686
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.69e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

QD
type: SiteQuality
SIO_000300: 9.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.36e-1

DP
type: SiteQuality
SIO_000300: 1.102259e6

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000360779
ensembl transcript: ENST00000371714
gene symbol: OSBPL9
hgvsc: ENST00000371714.1:c.319-44T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435129
ensembl transcript: ENST00000527631
gene symbol: OSBPL9
hgvsc: ENST00000527631.1:c.-177-44T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.178-44T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000354970
ensembl transcript: ENST00000361556
gene symbol: OSBPL9
hgvsc: ENST00000361556.5:c.28-44T>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 14699
bin: 1.25e1
variant carriers: 2

GenotypeDepth
all individuals: 7062
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2355
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 67
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 520
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 408
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13898
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 2681
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6607
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 304
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 950
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 408
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 69
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9910
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 187
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 146
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 175
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2208
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11547
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1692
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2740
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1854
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1310
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15640
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1153
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5150
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1881
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3834
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6181
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 679
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2912
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.475674707962226e-5
allele num: 44686
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13696
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.69e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.102259e6

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

QD
type: SiteQuality
SIO_000300: 9.08e0

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435627
ensembl transcript: ENST00000534040
gene symbol: OSBPL9
hgvsc: ENST00000534040.1:c.-177-42G>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000413263
ensembl transcript: ENST00000453295
gene symbol: OSBPL9
hgvsc: ENST00000453295.1:c.268-42G>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000360779
ensembl transcript: ENST00000371714
gene symbol: OSBPL9
hgvsc: ENST00000371714.1:c.319-42G>T
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 951
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2713
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 67
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 146
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7178
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11120
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13976
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 14454
bin: 1.25e1
variant carriers: 3

GenotypeDepth
all individuals: 2162
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 519
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 304
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 187
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5609
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 408
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 408
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 69
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 175
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2378
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2003
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1641
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1360
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 12243
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3818
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1164
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4947
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17038
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6122
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2745
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1882
bin: 9.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 698
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 4.664179104477612e-4
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7098
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13688
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8320
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.112942e6

VQSLOD
type: SiteQuality
SIO_000300: -2.456e-1

QD
type: SiteQuality
SIO_000300: 8.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.412e0

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433675
ensembl transcript: ENST00000530544
gene symbol: OSBPL9
hgvsc: ENST00000530544.1:c.115-41C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.178-41C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000413263
ensembl transcript: ENST00000453295
gene symbol: OSBPL9
hgvsc: ENST00000453295.1:c.268-41C>T
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 110
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 69
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14021
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2062
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2732
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 408
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14229
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 146
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5171
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 956
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 520
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 175
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7237
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 304
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 408
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11755
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 187
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 67
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1605
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12446
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17765
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1223
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3808
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2748
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1901
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6074
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4825
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1081
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2142
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1879
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 218
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7118
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44724
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.306736811340056e-5
allele num: 13686
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.574e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e0

MQRankSum
type: SiteQuality
SIO_000300: 3.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.846e-1

QD
type: SiteQuality
SIO_000300: 1.792e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.295e0

DP
type: SiteQuality
SIO_000300: 1.118948e6

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435129
ensembl transcript: ENST00000527631
gene symbol: OSBPL9
hgvsc: ENST00000527631.1:c.-177-21T>C
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000434798
ensembl transcript: ENST00000489990
gene symbol: OSBPL9
hgvsc: ENST00000489990.1:c.316-21T>C
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000402646
ensembl transcript: ENST00000435686
gene symbol: OSBPL9
hgvsc: ENST00000435686.2:c.-177-21T>C
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 964
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 21896
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 787
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2983
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 303
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8564
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 408
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13118
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 186
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 147
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 8233
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1629
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 56
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 521
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 67
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 408
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 175
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 69
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28672
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2671
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3679
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3115
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 732
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1983
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12985
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1883
bin: 9.75e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14000
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9208
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.162250116225012e-4
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.19533478771606e-5
allele num: 47672
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

DP
type: SiteQuality
SIO_000300: 1.238968e6

FS
type: SiteQuality
SIO_000300: 1.692e0

QD
type: SiteQuality
SIO_000300: 1.159e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.14e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.178-18C>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000413263
ensembl transcript: ENST00000453295
gene symbol: OSBPL9
hgvsc: ENST00000453295.1:c.268-18C>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000337265
ensembl transcript: ENST00000337809
gene symbol: OSBPL9
hgvsc: ENST00000337809.4:c.373-18C>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 177
bin: 6.75e1
variant carriers: 43

GenotypeDepth
all individuals: 581
bin: 4.25e1
variant carriers: 124

GenotypeDepth
all individuals: 3164
bin: 3.25e1
variant carriers: 229

GenotypeDepth
all individuals: 8893
bin: 2.75e1
variant carriers: 250

GenotypeDepth
all individuals: 22601
bin: 2.25e1
variant carriers: 260

GenotypeDepth
all individuals: 1770
bin: 1.75e1
variant carriers: 306

GenotypeDepth
all individuals: 1058
bin: 3.75e1
variant carriers: 175

GenotypeDepth
all individuals: 441
bin: 9.75e1
variant carriers: 193

GenotypeDepth
all individuals: 652
bin: 2.5e0
variant carriers: 3

GenotypeDepth
all individuals: 7377
bin: 1.25e1
variant carriers: 248

GenotypeDepth
all individuals: 79
bin: 8.25e1
variant carriers: 16

GenotypeDepth
all individuals: 64
bin: 9.25e1
variant carriers: 12

GenotypeDepth
all individuals: 70
bin: 8.75e1
variant carriers: 17

GenotypeDepth
all individuals: 351
bin: 5.25e1
variant carriers: 71

GenotypeDepth
all individuals: 127
bin: 7.25e1
variant carriers: 28

GenotypeDepth
all individuals: 460
bin: 4.75e1
variant carriers: 87

GenotypeDepth
all individuals: 85
bin: 7.75e1
variant carriers: 25

GenotypeDepth
all individuals: 231
bin: 5.75e1
variant carriers: 64

GenotypeDepth
all individuals: 209
bin: 6.25e1
variant carriers: 52

GenotypeDepth
all individuals: 12289
bin: 7.5e0
variant carriers: 84

GenotypeQuality
all individuals: 548
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 520
bin: 4.75e1
variant carriers: 9

GenotypeQuality
all individuals: 245
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 341
bin: 1.75e1
variant carriers: 7

GenotypeQuality
all individuals: 12226
bin: 2.25e1
variant carriers: 5

GenotypeQuality
all individuals: 3115
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 615
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 602
bin: 7.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1666
bin: 3.75e1
variant carriers: 5

GenotypeQuality
all individuals: 137
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3574
bin: 9.75e1
variant carriers: 2149

GenotypeQuality
all individuals: 162
bin: 8.75e1
variant carriers: 22

GenotypeQuality
all individuals: 29614
bin: 6.25e1
variant carriers: 10

GenotypeQuality
all individuals: 473
bin: 5.25e1
variant carriers: 8

GenotypeQuality
all individuals: 298
bin: 8.25e1
variant carriers: 14

GenotypeQuality
all individuals: 625
bin: 7.25e1
variant carriers: 6

GenotypeQuality
all individuals: 2988
bin: 6.75e1
variant carriers: 7

GenotypeQuality
all individuals: 353
bin: 5.75e1
variant carriers: 8

GenotypeQuality
all individuals: 190
bin: 9.25e1
variant carriers: 11

GenotypeQuality
all individuals: 2387
bin: 2.75e1
variant carriers: 6

East Asian
type: Population
allele count: 26
allele frequency: 3.421953145564622e-3
allele num: 7598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 8.880994671403197e-4
allele num: 5630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1155
allele frequency: 2.370884309056573e-2
allele num: 48716
num of homozygotes: 33

African
type: Population
allele count: 674
allele frequency: 7.65213442325159e-2
allele num: 8808
num of homozygotes: 27

Latino
type: Population
allele count: 153
allele frequency: 1.635314236853356e-2
allele num: 9356
num of homozygotes: 0

Other
type: Population
allele count: 30
allele frequency: 4.0e-2
allele num: 750
num of homozygotes: 2

South Asian
type: Population
allele count: 218
allele frequency: 1.548515414121324e-2
allele num: 14078
num of homozygotes: 1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.429e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.52e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

FS
type: SiteQuality
SIO_000300: 1.266e0

DP
type: SiteQuality
SIO_000300: 1.287897e6

VQSLOD
type: SiteQuality
SIO_000300: 4.46e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.54e-1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000407168
ensembl transcript: ENST00000428468
gene symbol: OSBPL9
hgvsc: ENST00000428468.1:c.319-16A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000413263
ensembl transcript: ENST00000453295
gene symbol: OSBPL9
hgvsc: ENST00000453295.1:c.268-16A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433279
ensembl transcript: ENST00000462759
gene symbol: OSBPL9
hgvsc: ENST00000462759.1:c.-177-16A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433083
ensembl transcript: ENST00000531828
gene symbol: OSBPL9
hgvsc: ENST00000531828.1:c.-177-16A>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 6727
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 296
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 486
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 597
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 265
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11999
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 9442
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3201
bin: 3.25e1
variant carriers: 2

GenotypeDepth
all individuals: 1582
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 964
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 105
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 181
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23897
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 396
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 167
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2223
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12093
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3291
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1560
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31989
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1507
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 677
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2917
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5670
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14150
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.300728407908429e-4
allele num: 7688
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.074104069649727e-5
allele num: 49390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8836
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.637e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e0

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-2

FS
type: SiteQuality
SIO_000300: 2.269e0

VQSLOD
type: SiteQuality
SIO_000300: 3.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e0

DP
type: SiteQuality
SIO_000300: 1.249193e6

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433675
ensembl transcript: ENST00000530544
gene symbol: OSBPL9
hgvsc: ENST00000530544.1:c.115-13T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433279
ensembl transcript: ENST00000462759
gene symbol: OSBPL9
hgvsc: ENST00000462759.1:c.-177-13T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000337265
ensembl transcript: ENST00000337809
gene symbol: OSBPL9
hgvsc: ENST00000337809.4:c.373-13T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000484890
gene symbol: OSBPL9
hgvsc: ENST00000484890.1:n.78-13T>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1435
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 296
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 527
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 181
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3214
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25055
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 6082
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 483
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11552
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 167
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 265
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9581
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 396
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 967
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1504
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 306
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1390
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11671
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 687
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2602
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2024
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33096
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3315
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14212
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5714
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50060
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7792
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.035625517812759e-4
allele num: 9656
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.911e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 1.808e0

QD
type: SiteQuality
SIO_000300: 1.717e1

MQRankSum
type: SiteQuality
SIO_000300: 1.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.24e0

DP
type: SiteQuality
SIO_000300: 1.264876e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.102e0

VQSLOD
type: SiteQuality
SIO_000300: -1.073e0

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000431980
ensembl transcript: ENST00000486942
gene symbol: OSBPL9
hgvsc: ENST00000486942.1:c.-81-1183T>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000360779
ensembl transcript: ENST00000371714
gene symbol: OSBPL9
hgvsc: ENST00000371714.1:c.319-9T>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.178-9T>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000407168
ensembl transcript: ENST00000428468
gene symbol: OSBPL9
hgvsc: ENST00000428468.1:c.319-9T>A
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10716
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 967
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 265
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 396
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5221
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 295
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9864
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1227
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 167
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3251
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 441
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 483
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 181
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 26730
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35202
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10983
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1145
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2199
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1729
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3354
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1503
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 369
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14326
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8954
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5792
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9910
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.950534446438324e-5
allele num: 51268
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.63e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.9e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.33e0

DP
type: SiteQuality
SIO_000300: 1.289832e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.65e-1

QD
type: SiteQuality
SIO_000300: 1.207e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.178-6_178-3delCTCT
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435264
ensembl transcript: ENST00000495776
gene symbol: OSBPL9
hgvsc: ENST00000495776.1:c.*36-6_*36-3delCTCT
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000432801
ensembl transcript: ENST00000532975
gene symbol: OSBPL9
hgvsc: ENST00000532975.1:c.-177-6_-177-3delCTCT
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000360779
ensembl transcript: ENST00000371714
gene symbol: OSBPL9
hgvsc: ENST00000371714.1:c.319-6_319-3delCTCT
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000484890
gene symbol: OSBPL9
hgvsc: ENST00000484890.1:n.78-6_78-3delCTCT
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 3252
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26961
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1221
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 426
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 483
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10582
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5074
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 181
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 967
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9934
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 396
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 295
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 167
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 265
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3360
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10804
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1674
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1114
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1503
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 153
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35011
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2139
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51476
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.004823151125402e-4
allele num: 9952
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14330
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7912
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5810
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8962
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.225e0

VQSLOD
type: SiteQuality
SIO_000300: 9.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

FS
type: SiteQuality
SIO_000300: 1.072e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e0

MQRankSum
type: SiteQuality
SIO_000300: 1.45e0

QD
type: SiteQuality
SIO_000300: 1.331e1

MQ
type: SiteQuality
SIO_000300: 5.938e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.07e-1

DP
type: SiteQuality
SIO_000300: 1.293989e6

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000432801
ensembl transcript: ENST00000532975
gene symbol: OSBPL9
hgvsc: ENST00000532975.1:c.-177-6C>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433675
ensembl transcript: ENST00000530544
gene symbol: OSBPL9
hgvsc: ENST00000530544.1:c.115-6C>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000360779
ensembl transcript: ENST00000371714
gene symbol: OSBPL9
hgvsc: ENST00000371714.1:c.319-6C>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000431980
ensembl transcript: ENST00000486942
gene symbol: OSBPL9
hgvsc: ENST00000486942.1:c.-81-1180C>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.178-6C>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 141
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 181
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 970
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4741
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27631
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10186
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 167
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1147
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 484
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 265
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3287
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 10069
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 385
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 295
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 396
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3375
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1033
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10518
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36299
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1570
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1503
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 315
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1973
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8994
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10056
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52040
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5844
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.958942240779402e-5
allele num: 14370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7956
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e0

DP
type: SiteQuality
SIO_000300: 1.30524e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.046e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.285e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000484890
gene symbol: OSBPL9
hgvsc: ENST00000484890.1:n.78-6C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435264
ensembl transcript: ENST00000495776
gene symbol: OSBPL9
hgvsc: ENST00000495776.1:c.*36-6C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435627
ensembl transcript: ENST00000534040
gene symbol: OSBPL9
hgvsc: ENST00000534040.1:c.-177-6C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000354970
ensembl transcript: ENST00000361556
gene symbol: OSBPL9
hgvsc: ENST00000361556.5:c.28-6C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.178-6C>T
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 181
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1147
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4741
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10186
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 396
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 484
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 265
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 10069
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 385
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 167
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3287
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27631
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 295
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 970
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1570
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1033
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1973
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10518
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1503
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 650
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36299
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3375
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8994
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14370
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7956
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.921598770176787e-5
allele num: 52040
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10056
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.46e-1

DP
type: SiteQuality
SIO_000300: 1.30524e6

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.046e0

QD
type: SiteQuality
SIO_000300: 1.285e1

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435247
ensembl transcript: ENST00000481937
gene symbol: OSBPL9
hgvsc: ENST00000481937.1:c.-264-4C>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000484890
gene symbol: OSBPL9
hgvsc: ENST00000484890.1:n.78-4C>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.178-4C>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000431980
ensembl transcript: ENST00000486942
gene symbol: OSBPL9
hgvsc: ENST00000486942.1:c.-81-1178C>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000467064
gene symbol: OSBPL9
hgvsc: ENST00000467064.1:n.443C>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000354970
ensembl transcript: ENST00000361556
gene symbol: OSBPL9
hgvsc: ENST00000361556.5:c.28-4C>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 28502
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 296
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 349
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1062
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4304
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 105
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3287
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10178
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 486
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 972
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9760
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 181
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 395
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 168
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 264
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1436
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10132
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1764
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1506
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 344
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 904
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3414
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37298
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.954500689383494e-4
allele num: 10154
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8030
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9016
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5874
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.690008345345573e-5
allele num: 52724
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.6e-2

FS
type: SiteQuality
SIO_000300: 1.188e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

QD
type: SiteQuality
SIO_000300: 1.215e1

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

DP
type: SiteQuality
SIO_000300: 1.317223e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435627
ensembl transcript: ENST00000534040
gene symbol: OSBPL9
hgvsc: ENST00000534040.1:c.-168T>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433083
ensembl transcript: ENST00000531828
gene symbol: OSBPL9
hgvsc: ENST00000531828.1:c.-168T>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000402646
ensembl transcript: ENST00000435686
gene symbol: OSBPL9
hgvsc: ENST00000435686.2:c.-168T>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000467064
gene symbol: OSBPL9
hgvsc: ENST00000467064.1:n.456T>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435129
ensembl transcript: ENST00000527631
gene symbol: OSBPL9
hgvsc: ENST00000527631.1:c.-168T>A
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 219
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 971
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7813
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 483
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3332
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 141
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2839
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 837
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 181
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 295
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 395
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 168
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10862
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 31549
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 264
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1013
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8352
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3538
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 672
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40832
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1502
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8236
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6088
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.795719005889958e-5
allele num: 55688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14738
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.051e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.501e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.36e0

DP
type: SiteQuality
SIO_000300: 1.36656e6

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000467064
gene symbol: OSBPL9
hgvsc: ENST00000467064.1:n.468C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.199C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 3_prime_UTR_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000390113
ensembl transcript: ENST00000435274
gene symbol: OSBPL9
hgvsc: ENST00000435274.2:c.*291C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: missense_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435429
ensembl transcript: ENST00000526917
gene symbol: OSBPL9
hgvsc: ENST00000526917.1:c.49C>T
hgvsp: ENSP00000435429.1:p.Pro17Ser
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 976
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 485
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 181
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 142
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 32171
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 397
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 295
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1067
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 177
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3369
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6872
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2351
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 168
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 264
bin: 9.75e1
variant carriers: 4

GenotypeDepth
all individuals: 11434
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41657
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3545
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7532
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1502
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 457
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9290
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.051229939028664e-4
allele num: 57076
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10642
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.13e0

FS
type: SiteQuality
SIO_000300: 5.33e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

QD
type: SiteQuality
SIO_000300: 1.138e1

DP
type: SiteQuality
SIO_000300: 1.390076e6

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.209A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433675
ensembl transcript: ENST00000530544
gene symbol: OSBPL9
hgvsc: ENST00000530544.1:c.146A>G
hgvsp: ENSP00000433675.1:p.Gln49Arg
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435247
ensembl transcript: ENST00000481937
gene symbol: OSBPL9
hgvsc: ENST00000481937.1:c.-233A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433083
ensembl transcript: ENST00000531828
gene symbol: OSBPL9
hgvsc: ENST00000531828.1:c.-146A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435129
ensembl transcript: ENST00000527631
gene symbol: OSBPL9
hgvsc: ENST00000527631.1:c.-146A>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 144
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11706
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3380
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2078
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 863
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 181
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 396
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6367
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 482
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 168
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 968
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 260
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 32921
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 295
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7241
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1498
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 676
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43017
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3563
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10716
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14934
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6224
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.453157912911357e-5
allele num: 57918
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8352
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.403212e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.04e0

MQRankSum
type: SiteQuality
SIO_000300: 8.88e-1

QD
type: SiteQuality
SIO_000300: 1.069e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.15e-1

Annotation
canonical: false
consequence: 3_prime_UTR_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000390113
ensembl transcript: ENST00000435274
gene symbol: OSBPL9
hgvsc: ENST00000435274.2:c.*305T>C
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433083
ensembl transcript: ENST00000531828
gene symbol: OSBPL9
hgvsc: ENST00000531828.1:c.-142T>C
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435247
ensembl transcript: ENST00000481937
gene symbol: OSBPL9
hgvsc: ENST00000481937.1:c.-229T>C
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000432801
ensembl transcript: ENST00000532975
gene symbol: OSBPL9
hgvsc: ENST00000532975.1:c.-142T>C
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 3_prime_UTR_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435264
ensembl transcript: ENST00000495776
gene symbol: OSBPL9
hgvsc: ENST00000495776.1:c.*71T>C
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 11729
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3374
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 295
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 744
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 483
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 260
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1973
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 181
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 138
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 168
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 968
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6187
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 396
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 33314
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7152
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3564
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43611
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1497
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 280
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14930
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.718390212049352e-5
allele num: 58194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6240
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10724
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.11e-1

DP
type: SiteQuality
SIO_000300: 1.407685e6

MQRankSum
type: SiteQuality
SIO_000300: 1.67e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.422e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.44e-1

FS
type: SiteQuality
SIO_000300: 3.372e0

VQSLOD
type: SiteQuality
SIO_000300: 8.070000000000001e-1

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000360779
ensembl transcript: ENST00000371714
gene symbol: OSBPL9
hgvsc: ENST00000371714.1:c.371C>G
hgvsp: ENSP00000360779.1:p.Thr124Arg
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000402646
ensembl transcript: ENST00000435686
gene symbol: OSBPL9
hgvsc: ENST00000435686.2:c.-125C>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000432801
ensembl transcript: ENST00000532975
gene symbol: OSBPL9
hgvsc: ENST00000532975.1:c.-125C>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 3_prime_UTR_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435264
ensembl transcript: ENST00000495776
gene symbol: OSBPL9
hgvsc: ENST00000495776.1:c.*88C>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 11747
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 174
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 181
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3317
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 295
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2707
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 32513
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 486
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 607
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6400
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 961
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 168
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 260
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 394
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43144
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1495
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8410
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3407
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6242
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14676
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57986
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.363295880149813e-5
allele num: 10680
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8354
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

VQSLOD
type: SiteQuality
SIO_000300: 5.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.102e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.31e0

DP
type: SiteQuality
SIO_000300: 1.397912e6

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.234A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433675
ensembl transcript: ENST00000530544
gene symbol: OSBPL9
hgvsc: ENST00000530544.1:c.171A>G
hgvsp: ENST00000530544.1:c.171A>G(p.%3D)
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 3_prime_UTR_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435264
ensembl transcript: ENST00000495776
gene symbol: OSBPL9
hgvsc: ENST00000495776.1:c.*92A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000467064
gene symbol: OSBPL9
hgvsc: ENST00000467064.1:n.503A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435247
ensembl transcript: ENST00000481937
gene symbol: OSBPL9
hgvsc: ENST00000481937.1:c.-208A>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 394
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 480
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 946
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 295
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3240
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 181
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 202
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3341
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 677
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11643
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 168
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 31646
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6734
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 260
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1495
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 296
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3399
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42253
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9342
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.737921445950643e-5
allele num: 57540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14524
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6224
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8340
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.384351e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.765e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.07e-1

QD
type: SiteQuality
SIO_000300: 1.962e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.43e-1

FS
type: SiteQuality
SIO_000300: 6.786e0

VQSLOD
type: SiteQuality
SIO_000300: -1.824e0

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000431980
ensembl transcript: ENST00000486942
gene symbol: OSBPL9
hgvsc: ENST00000486942.1:c.-81-1105C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433675
ensembl transcript: ENST00000530544
gene symbol: OSBPL9
hgvsc: ENST00000530544.1:c.184C>T
hgvsp: ENST00000530544.1:c.184C>T(p.%3D)
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.247C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433083
ensembl transcript: ENST00000531828
gene symbol: OSBPL9
hgvsc: ENST00000531828.1:c.-108C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000354970
ensembl transcript: ENST00000361556
gene symbol: OSBPL9
hgvsc: ENST00000361556.5:c.97C>T
hgvsp: ENST00000361556.5:c.97C>T(p.%3D)
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 27136
bin: 2.25e1
variant carriers: 4

GenotypeDepth
all individuals: 105
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3035
bin: 3.25e1
variant carriers: 2

GenotypeDepth
all individuals: 181
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 475
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 365
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 260
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 10994
bin: 2.75e1
variant carriers: 5

GenotypeDepth
all individuals: 62
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 395
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6778
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 295
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 169
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8158
bin: 7.5e0
variant carriers: 2

GenotypeDepth
all individuals: 938
bin: 3.75e1
variant carriers: 5

GenotypeDepth
all individuals: 1024
bin: 1.75e1
variant carriers: 3

GenotypeDepth
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37294
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 559
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1509
bin: 9.75e1
variant carriers: 23

GenotypeQuality
all individuals: 358
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3096
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13913
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8226
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9276
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6110
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 22
allele frequency: 3.959255659935932e-4
allele num: 55566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.97e0

DP
type: SiteQuality
SIO_000300: 1.31972e6

FS
type: SiteQuality
SIO_000300: 7.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.822e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.231e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.39e-1

Annotation
canonical: false
consequence: 3_prime_UTR_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435264
ensembl transcript: ENST00000495776
gene symbol: OSBPL9
hgvsc: ENST00000495776.1:c.*111A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000431980
ensembl transcript: ENST00000486942
gene symbol: OSBPL9
hgvsc: ENST00000486942.1:c.-81-1099A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000354970
ensembl transcript: ENST00000361556
gene symbol: OSBPL9
hgvsc: ENST00000361556.5:c.103A>G
hgvsp: ENSP00000354970.5:p.Ile35Val
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433083
ensembl transcript: ENST00000531828
gene symbol: OSBPL9
hgvsc: ENST00000531828.1:c.-102A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000432801
ensembl transcript: ENST00000532975
gene symbol: OSBPL9
hgvsc: ENST00000532975.1:c.-102A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435129
ensembl transcript: ENST00000527631
gene symbol: OSBPL9
hgvsc: ENST00000527631.1:c.-102A>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 393
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 182
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 168
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 565
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10189
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1376
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2901
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 9667
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 917
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 295
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9099
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 23720
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 259
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 472
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17493
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2936
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1488
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 290
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33083
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8116
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13296
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10102
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.656726308813784e-4
allele num: 6036
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

FS
type: SiteQuality
SIO_000300: 3.776e0

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

QD
type: SiteQuality
SIO_000300: 1.538e1

VQSLOD
type: SiteQuality
SIO_000300: 1.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.02e-1

DP
type: SiteQuality
SIO_000300: 1.266407e6

MQ
type: SiteQuality
SIO_000300: 5.938e1

Annotation
canonical: false
consequence: 3_prime_UTR_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000390113
ensembl transcript: ENST00000435274
gene symbol: OSBPL9
hgvsc: ENST00000435274.2:c.*354G>C
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 3_prime_UTR_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435264
ensembl transcript: ENST00000495776
gene symbol: OSBPL9
hgvsc: ENST00000495776.1:c.*120G>C
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435627
ensembl transcript: ENST00000534040
gene symbol: OSBPL9
hgvsc: ENST00000534040.1:c.-93G>C
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000484890
gene symbol: OSBPL9
hgvsc: ENST00000484890.1:n.162G>C
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000431980
ensembl transcript: ENST00000486942
gene symbol: OSBPL9
hgvsc: ENST00000486942.1:c.-81-1090G>C
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 182
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13637
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 393
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 892
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 168
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2776
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 921
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 472
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10235
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2039
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9084
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 295
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 259
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 18841
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 852
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1488
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 430
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1027
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1394
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22598
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2641
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27461
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.794922393837046e-5
allele num: 52702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5926
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9670
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9062
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7948
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.77e-1

FS
type: SiteQuality
SIO_000300: 1.5452e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

DP
type: SiteQuality
SIO_000300: 1.194732e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.64e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.495e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
consequence: splice_region_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000524620
gene symbol: OSBPL9
hgvsc: ENST00000524620.1:n.34A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
consequence: splice_region_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.272A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000432801
ensembl transcript: ENST00000532975
gene symbol: OSBPL9
hgvsc: ENST00000532975.1:c.-83A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: missense_variant
consequence: splice_region_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000360779
ensembl transcript: ENST00000371714
gene symbol: OSBPL9
hgvsc: ENST00000371714.1:c.413A>G
hgvsp: ENSP00000360779.1:p.Lys138Arg
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433083
ensembl transcript: ENST00000531828
gene symbol: OSBPL9
hgvsc: ENST00000531828.1:c.-83A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000431980
ensembl transcript: ENST00000486942
gene symbol: OSBPL9
hgvsc: ENST00000486942.1:c.-81-1080A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 3_prime_UTR_variant
consequence: splice_region_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435264
ensembl transcript: ENST00000495776
gene symbol: OSBPL9
hgvsc: ENST00000495776.1:c.*130A>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 182
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2064
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 469
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6875
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19784
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2518
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11984
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 908
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 54
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 295
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3769
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 393
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 168
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 60
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10506
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 259
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1487
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30942
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2394
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2164
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2289
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17401
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1183
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8802
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.134301270417423e-4
allele num: 8816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49742
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

VQSLOD
type: SiteQuality
SIO_000300: -2.742e-1

QD
type: SiteQuality
SIO_000300: 1.599e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.56e-1

FS
type: SiteQuality
SIO_000300: 6.658e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

DP
type: SiteQuality
SIO_000300: 1.065153e6

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000354970
ensembl transcript: ENST00000361556
gene symbol: OSBPL9
hgvsc: ENST00000361556.5:c.123+12G>C
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.273+12G>C
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000337265
ensembl transcript: ENST00000337809
gene symbol: OSBPL9
hgvsc: ENST00000337809.4:c.468+12G>C
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000434798
ensembl transcript: ENST00000489990
gene symbol: OSBPL9
hgvsc: ENST00000489990.1:c.411+12G>C
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 135
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 399
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1564
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 354
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8578
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 21099
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2870
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15581
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 730
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 275
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 60
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5378
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 259
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 100
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2475
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 165
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 159
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33772
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1577
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5187
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2767
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10901
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1481
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7144
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.137665669089354e-4
allele num: 4678
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36910
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6258
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8756
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6754
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.9e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.94e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

DP
type: SiteQuality
SIO_000300: 8.22686e5

MQRankSum
type: SiteQuality
SIO_000300: 4.12e-1

QD
type: SiteQuality
SIO_000300: 9.199999999999999e0

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433083
ensembl transcript: ENST00000531828
gene symbol: OSBPL9
hgvsc: ENST00000531828.1:c.-82+25dupA
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000524620
gene symbol: OSBPL9
hgvsc: ENST00000524620.1:n.35+25dupA
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433279
ensembl transcript: ENST00000462759
gene symbol: OSBPL9
hgvsc: ENST00000462759.1:c.-82+25dupA
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000337265
ensembl transcript: ENST00000337809
gene symbol: OSBPL9
hgvsc: ENST00000337809.4:c.468+25dupA
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000402646
ensembl transcript: ENST00000435686
gene symbol: OSBPL9
hgvsc: ENST00000435686.2:c.-82+25dupA
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 252
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1321
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 132
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 111
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 84
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 307
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23893
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10420
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 472
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1444
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16518
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 62
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 175
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 762
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 817
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 258
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24969
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16637
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2243
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2968
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2779
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1477
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1763
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1141
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3910
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2052
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16102
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2916
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4146
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 6.009615384615385e-4
allele num: 1664
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

DP
type: SiteQuality
SIO_000300: 5.40104e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.393e0

QD
type: SiteQuality
SIO_000300: 1.325e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.78e-2

FS
type: SiteQuality
SIO_000300: 3.074e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e0

MQ
type: SiteQuality
SIO_000300: 6.19e1

MQRankSum
type: SiteQuality
SIO_000300: 3.07e0

VQSLOD
type: SiteQuality
SIO_000300: -7.637e-1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000337265
ensembl transcript: ENST00000337809
gene symbol: OSBPL9
hgvsc: ENST00000337809.4:c.468+23A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000484890
gene symbol: OSBPL9
hgvsc: ENST00000484890.1:n.173+23A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.273+23A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000390113
ensembl transcript: ENST00000435274
gene symbol: OSBPL9
hgvsc: ENST00000435274.2:c.*365+23A>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 1256
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 62
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 811
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 24022
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 763
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 460
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 109
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 132
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10313
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16582
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 1452
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 246
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 175
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 84
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 258
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 303
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16918
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1819
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1132
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1476
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 119
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2109
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2548
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2935
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25102
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 987
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3932
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2054
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2928
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16166
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4142
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1680
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 310
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.76e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 9.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

DP
type: SiteQuality
SIO_000300: 5.37651e5

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e0

QD
type: SiteQuality
SIO_000300: 1.285e1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000431980
ensembl transcript: ENST00000486942
gene symbol: OSBPL9
hgvsc: ENST00000486942.1:c.-81-1050A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433279
ensembl transcript: ENST00000462759
gene symbol: OSBPL9
hgvsc: ENST00000462759.1:c.-82+29A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433083
ensembl transcript: ENST00000531828
gene symbol: OSBPL9
hgvsc: ENST00000531828.1:c.-82+29A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433675
ensembl transcript: ENST00000530544
gene symbol: OSBPL9
hgvsc: ENST00000530544.1:c.210+29A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000432801
ensembl transcript: ENST00000532975
gene symbol: OSBPL9
hgvsc: ENST00000532975.1:c.-82+29A>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 692
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1333
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16512
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 84
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 287
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 755
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1044
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 25966
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 407
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8335
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 258
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 238
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 62
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 132
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 109
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3461
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2204
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26218
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15222
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2089
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1023
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1084
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1759
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 120
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1876
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3558
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 7.462686567164179e-4
allele num: 1340
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3662
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14506
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.91e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.02e0

QD
type: SiteQuality
SIO_000300: 1.731e1

MQRankSum
type: SiteQuality
SIO_000300: 1.54e0

VQSLOD
type: SiteQuality
SIO_000300: -2.462e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.53e0

DP
type: SiteQuality
SIO_000300: 5.03895e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000407168
ensembl transcript: ENST00000428468
gene symbol: OSBPL9
hgvsc: ENST00000428468.1:c.414+31A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.273+31A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000360775
ensembl transcript: ENST00000371710
gene symbol: OSBPL9
hgvsc: ENST00000371710.3:c.468+31A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000390113
ensembl transcript: ENST00000435274
gene symbol: OSBPL9
hgvsc: ENST00000435274.2:c.*365+31A>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 1074
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 258
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 635
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 402
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 742
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 109
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7362
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 286
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1261
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 172
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16430
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 26756
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 62
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 84
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 132
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 238
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1063
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2203
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26402
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1033
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1476
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2591
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3821
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13876
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1680
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1778
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3522
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 3.088326127239037e-4
allele num: 3238
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2120
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1098
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 258
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.39e0

VQSLOD
type: SiteQuality
SIO_000300: -2.284e0

MQ
type: SiteQuality
SIO_000300: 5.906e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.09e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e0

FS
type: SiteQuality
SIO_000300: 8.688000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 4.54e-1

QD
type: SiteQuality
SIO_000300: 6.54e0

DP
type: SiteQuality
SIO_000300: 4.89089e5

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433083
ensembl transcript: ENST00000531828
gene symbol: OSBPL9
hgvsc: ENST00000531828.1:c.-81-49C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433675
ensembl transcript: ENST00000530544
gene symbol: OSBPL9
hgvsc: ENST00000530544.1:c.211-49C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000484890
gene symbol: OSBPL9
hgvsc: ENST00000484890.1:n.174-49C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000431980
ensembl transcript: ENST00000486942
gene symbol: OSBPL9
hgvsc: ENST00000486942.1:c.-81-49C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.274-49C>T
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 274
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1549
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1924
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 624
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3068
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 195
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1942
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 499
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 445
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14803
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 59
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3491
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 785
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13878
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4959
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7865
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 968
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1300
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1742
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2867
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14723
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 635
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1735
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2809
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18662
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4518
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3836
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7155
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507022725902707e-5
allele num: 66356
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15700
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

MQ
type: SiteQuality
SIO_000300: 5.976e1

QD
type: SiteQuality
SIO_000300: 9.74e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.487e0

DP
type: SiteQuality
SIO_000300: 2.316369e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.54e0

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

FS
type: SiteQuality
SIO_000300: 2.124e0

MQRankSum
type: SiteQuality
SIO_000300: -5.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000407168
ensembl transcript: ENST00000428468
gene symbol: OSBPL9
hgvsc: ENST00000428468.1:c.415-48G>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000431980
ensembl transcript: ENST00000486942
gene symbol: OSBPL9
hgvsc: ENST00000486942.1:c.-81-48G>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000524620
gene symbol: OSBPL9
hgvsc: ENST00000524620.1:n.36-48G>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433083
ensembl transcript: ENST00000531828
gene symbol: OSBPL9
hgvsc: ENST00000531828.1:c.-81-48G>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.274-48G>A
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 445
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1942
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1834
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 274
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14809
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4959
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7866
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 623
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3582
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 968
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 500
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1539
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 785
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3068
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1300
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 195
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1742
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 13881
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 401
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4515
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2808
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14719
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 65
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1734
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18787
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3833
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2866
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 744
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7161
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.742790335151988e-5
allele num: 10264
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50652324565368e-5
allele num: 66378
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.341958396752917e-5
allele num: 15768
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

DP
type: SiteQuality
SIO_000300: 2.316801e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

MQRankSum
type: SiteQuality
SIO_000300: 9.54e-1

FS
type: SiteQuality
SIO_000300: 3.754e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

VQSLOD
type: SiteQuality
SIO_000300: 8.090000000000001e-1

QD
type: SiteQuality
SIO_000300: 8.449999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000432801
ensembl transcript: ENST00000532975
gene symbol: OSBPL9
hgvsc: ENST00000532975.1:c.-81-42T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435264
ensembl transcript: ENST00000495776
gene symbol: OSBPL9
hgvsc: ENST00000495776.1:c.*132-42T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433083
ensembl transcript: ENST00000531828
gene symbol: OSBPL9
hgvsc: ENST00000531828.1:c.-81-42T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435429
ensembl transcript: ENST00000526917
gene symbol: OSBPL9
hgvsc: ENST00000526917.1:c.124-42T>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 56
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7867
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 328
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13885
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 624
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14842
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4960
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 968
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 496
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1941
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1347
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3065
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1511
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4072
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 195
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1298
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 274
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 784
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1741
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 445
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2865
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7166
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19251
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4498
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3832
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2803
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1731
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14702
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15818
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506296318611797e-5
allele num: 66388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.5e-2

QD
type: SiteQuality
SIO_000300: 1.305e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

DP
type: SiteQuality
SIO_000300: 2.319185e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 9.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.44e0

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435627
ensembl transcript: ENST00000534040
gene symbol: OSBPL9
hgvsc: ENST00000534040.1:c.-81-39delA
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435429
ensembl transcript: ENST00000526917
gene symbol: OSBPL9
hgvsc: ENST00000526917.1:c.124-39delA
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000484890
gene symbol: OSBPL9
hgvsc: ENST00000484890.1:n.174-39delA
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000407168
ensembl transcript: ENST00000428468
gene symbol: OSBPL9
hgvsc: ENST00000428468.1:c.415-39delA
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 1941
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3065
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 784
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 274
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 496
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 624
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 195
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4072
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 445
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1347
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4960
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1511
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7867
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 328
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 968
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1741
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13885
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1298
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14842
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19251
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14702
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 72
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2803
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7166
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2865
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3832
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1731
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4498
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.321911746112024e-5
allele num: 15818
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.305e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.5e-2

FS
type: SiteQuality
SIO_000300: 6.38e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.44e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

DP
type: SiteQuality
SIO_000300: 2.319185e6

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000402646
ensembl transcript: ENST00000435686
gene symbol: OSBPL9
hgvsc: ENST00000435686.2:c.-81-41A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435627
ensembl transcript: ENST00000534040
gene symbol: OSBPL9
hgvsc: ENST00000534040.1:c.-81-41A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433083
ensembl transcript: ENST00000531828
gene symbol: OSBPL9
hgvsc: ENST00000531828.1:c.-81-41A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433279
ensembl transcript: ENST00000462759
gene symbol: OSBPL9
hgvsc: ENST00000462759.1:c.-81-41A>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 272
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 498
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 623
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1298
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3065
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1941
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1740
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 784
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 13885
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 967
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 445
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4959
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1261
bin: 1.75e1
variant carriers: 5

GenotypeDepth
all individuals: 1491
bin: 1.25e1
variant carriers: 2

GenotypeDepth
all individuals: 4166
bin: 2.25e1
variant carriers: 2

GenotypeDepth
all individuals: 7870
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 14853
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14707
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19469
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2863
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7171
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4498
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1732
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3833
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2804
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 257
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 12
allele frequency: 7.576714231594899e-4
allele num: 15838
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.182e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.93e-1

DP
type: SiteQuality
SIO_000300: 2.31971e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000390113
ensembl transcript: ENST00000435274
gene symbol: OSBPL9
hgvsc: ENST00000435274.2:c.*366-37T>C
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435627
ensembl transcript: ENST00000534040
gene symbol: OSBPL9
hgvsc: ENST00000534040.1:c.-81-37T>C
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000402646
ensembl transcript: ENST00000435686
gene symbol: OSBPL9
hgvsc: ENST00000435686.2:c.-81-37T>C
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000484890
gene symbol: OSBPL9
hgvsc: ENST00000484890.1:n.174-37T>C
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 622
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 272
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3065
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4955
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 967
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 784
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 490
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1740
bin: 9.75e1
variant carriers: 4

GenotypeDepth
all individuals: 999
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7872
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 195
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14925
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1429
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 51
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1299
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4436
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 328
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13885
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 445
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1940
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4507
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7188
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19792
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2864
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2805
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14696
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 80
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3830
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.844535359438924e-4
allele num: 10266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.006e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

QD
type: SiteQuality
SIO_000300: 1.204e1

FS
type: SiteQuality
SIO_000300: 1.861e0

VQSLOD
type: SiteQuality
SIO_000300: 2.04e0

MQRankSum
type: SiteQuality
SIO_000300: 2.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.54e0

DP
type: SiteQuality
SIO_000300: 2.321988e6

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433675
ensembl transcript: ENST00000530544
gene symbol: OSBPL9
hgvsc: ENST00000530544.1:c.211-31G>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433083
ensembl transcript: ENST00000531828
gene symbol: OSBPL9
hgvsc: ENST00000531828.1:c.-81-31G>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000432801
ensembl transcript: ENST00000532975
gene symbol: OSBPL9
hgvsc: ENST00000532975.1:c.-81-31G>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435429
ensembl transcript: ENST00000526917
gene symbol: OSBPL9
hgvsc: ENST00000526917.1:c.124-31G>A
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 3074
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 627
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 330
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15094
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7876
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1124
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4957
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 440
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 789
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 462
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1699
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 612
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5000
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 963
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 266
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 185
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13909
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1949
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1303
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3829
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1730
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2801
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7208
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14507
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 106
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4501
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2861
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20455
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507977199384745e-5
allele num: 66314
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.598e1

FS
type: SiteQuality
SIO_000300: 8.6467e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.262e0

MQ
type: SiteQuality
SIO_000300: 5.909e1

DP
type: SiteQuality
SIO_000300: 2.32545e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e0

QD
type: SiteQuality
SIO_000300: 2.047e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000484890
gene symbol: OSBPL9
hgvsc: ENST00000484890.1:n.174-21_174-20insAA
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000360779
ensembl transcript: ENST00000371714
gene symbol: OSBPL9
hgvsc: ENST00000371714.1:c.415-21_415-20insAA
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000354970
ensembl transcript: ENST00000361556
gene symbol: OSBPL9
hgvsc: ENST00000361556.5:c.124-21_124-20insAA
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.274-21_274-20insAA
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1641
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 628
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 601
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 378
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 182
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7898
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15442
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1949
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5617
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 220
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13965
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 258
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 432
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4971
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 974
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3067
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1309
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 331
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 801
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7283
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3843
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4528
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14633
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2809
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21326
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2877
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15992
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504664459825459e-5
allele num: 66460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.8316e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.49e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.67e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

DP
type: SiteQuality
SIO_000300: 2.328652e6

VQSLOD
type: SiteQuality
SIO_000300: -1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

QD
type: SiteQuality
SIO_000300: 1.855e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.408e0

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000434798
ensembl transcript: ENST00000489990
gene symbol: OSBPL9
hgvsc: ENST00000489990.1:c.412-20C>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435429
ensembl transcript: ENST00000526917
gene symbol: OSBPL9
hgvsc: ENST00000526917.1:c.124-20C>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000431274
ensembl transcript: ENST00000533884
gene symbol: OSBPL9
hgvsc: ENST00000533884.1:c.124-20C>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000337265
ensembl transcript: ENST00000337809
gene symbol: OSBPL9
hgvsc: ENST00000337809.4:c.469-20C>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 7889
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 628
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 432
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1951
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 257
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 548
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15503
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 365
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 13981
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 192
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4967
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5650
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 803
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 332
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1309
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 974
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3067
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 182
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1634
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4537
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2811
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7325
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2887
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3849
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21570
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14641
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16052
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504030802550836e-5
allele num: 66488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.9e-1

QD
type: SiteQuality
SIO_000300: 1.191e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.203e0

FS
type: SiteQuality
SIO_000300: 1.092e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.09e0

VQSLOD
type: SiteQuality
SIO_000300: -2.492e0

DP
type: SiteQuality
SIO_000300: 2.329209e6

MQ
type: SiteQuality
SIO_000300: 5.827e1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000354970
ensembl transcript: ENST00000361556
gene symbol: OSBPL9
hgvsc: ENST00000361556.5:c.124-13T>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000431274
ensembl transcript: ENST00000533884
gene symbol: OSBPL9
hgvsc: ENST00000533884.1:c.124-13T>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435247
ensembl transcript: ENST00000481937
gene symbol: OSBPL9
hgvsc: ENST00000481937.1:c.-168-13T>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000402646
ensembl transcript: ENST00000435686
gene symbol: OSBPL9
hgvsc: ENST00000435686.2:c.-81-13T>A
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 332
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1634
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1309
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5874
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 179
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4971
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 432
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 802
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 367
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13990
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 124
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7884
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1951
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 15595
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 304
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 257
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 629
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3066
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 974
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21953
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7336
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2809
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3844
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4535
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14640
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2886
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.5092439500977e-5
allele num: 66530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16186
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.167e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.21e-1

DP
type: SiteQuality
SIO_000300: 2.332923e6

FS
type: SiteQuality
SIO_000300: 5.787e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.38e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000354970
ensembl transcript: ENST00000361556
gene symbol: OSBPL9
hgvsc: ENST00000361556.5:c.124-5T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000390113
ensembl transcript: ENST00000435274
gene symbol: OSBPL9
hgvsc: ENST00000435274.2:c.*366-5T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000407168
ensembl transcript: ENST00000428468
gene symbol: OSBPL9
hgvsc: ENST00000428468.1:c.415-5T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435627
ensembl transcript: ENST00000534040
gene symbol: OSBPL9
hgvsc: ENST00000534040.1:c.-81-5T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.274-5T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433675
ensembl transcript: ENST00000530544
gene symbol: OSBPL9
hgvsc: ENST00000530544.1:c.211-5T>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 13998
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1309
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4971
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1634
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 629
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6169
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3066
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7886
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 223
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15663
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 179
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 802
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 974
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1950
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 432
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 331
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 172
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4533
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1734
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2885
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14638
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22376
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3845
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7352
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2809
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501907422426482e-5
allele num: 66582
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.13e-1

DP
type: SiteQuality
SIO_000300: 2.337041e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQ
type: SiteQuality
SIO_000300: 5.977e1

VQSLOD
type: SiteQuality
SIO_000300: 1.13e0

FS
type: SiteQuality
SIO_000300: 3.736e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.89e-1

QD
type: SiteQuality
SIO_000300: 1.391e1

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433675
ensembl transcript: ENST00000530544
gene symbol: OSBPL9
hgvsc: ENST00000530544.1:c.211-4G>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435129
ensembl transcript: ENST00000527631
gene symbol: OSBPL9
hgvsc: ENST00000527631.1:c.-81-4G>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000354970
ensembl transcript: ENST00000361556
gene symbol: OSBPL9
hgvsc: ENST00000361556.5:c.124-4G>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435247
ensembl transcript: ENST00000481937
gene symbol: OSBPL9
hgvsc: ENST00000481937.1:c.-168-4G>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433083
ensembl transcript: ENST00000531828
gene symbol: OSBPL9
hgvsc: ENST00000531828.1:c.-81-4G>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433279
ensembl transcript: ENST00000462759
gene symbol: OSBPL9
hgvsc: ENST00000462759.1:c.-81-4G>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000360779
ensembl transcript: ENST00000371714
gene symbol: OSBPL9
hgvsc: ENST00000371714.1:c.415-4G>T
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 1308
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 215
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3066
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 629
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15681
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7889
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 331
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4972
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 432
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1633
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 975
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 802
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 160
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 179
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6165
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14003
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1950
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2809
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14638
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 256
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22395
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3844
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7353
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1734
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4535
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2884
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16312
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.003634397621121e-5
allele num: 66586
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.795e0

QD
type: SiteQuality
SIO_000300: 1.056e1

MQRankSum
type: SiteQuality
SIO_000300: -1.194e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.78e-1

DP
type: SiteQuality
SIO_000300: 2.337415e6

MQ
type: SiteQuality
SIO_000300: 5.965e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.984e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.27e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
consequence: splice_region_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000484890
gene symbol: OSBPL9
hgvsc: ENST00000484890.1:n.174C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000432801
ensembl transcript: ENST00000532975
gene symbol: OSBPL9
hgvsc: ENST00000532975.1:c.-81C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
consequence: splice_region_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.274C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433279
ensembl transcript: ENST00000462759
gene symbol: OSBPL9
hgvsc: ENST00000462759.1:c.-81C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: missense_variant
consequence: splice_region_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435429
ensembl transcript: ENST00000526917
gene symbol: OSBPL9
hgvsc: ENST00000526917.1:c.124C>T
hgvsp: ENSP00000435429.1:p.Leu42Phe
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: missense_variant
consequence: splice_region_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433675
ensembl transcript: ENST00000530544
gene symbol: OSBPL9
hgvsc: ENST00000530544.1:c.211C>T
hgvsp: ENSP00000433675.1:p.Leu71Phe
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000431980
ensembl transcript: ENST00000486942
gene symbol: OSBPL9
hgvsc: ENST00000486942.1:c.-81C>T
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 4972
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 332
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 7886
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 179
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 974
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3066
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 802
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 194
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 15712
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14012
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1949
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6212
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1633
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1307
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 628
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 432
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14635
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4537
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7362
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22486
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2886
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2809
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1734
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3844
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16346
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501817198810561e-5
allele num: 66586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.914e1

DP
type: SiteQuality
SIO_000300: 2.338366e6

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.5e-2

QD
type: SiteQuality
SIO_000300: 7.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.53e-1

FS
type: SiteQuality
SIO_000300: 3.158e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.415e0

VQSLOD
type: SiteQuality
SIO_000300: -1.04e0

Annotation
canonical: false
consequence: synonymous_variant
consequence: splice_region_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000360775
ensembl transcript: ENST00000371710
gene symbol: OSBPL9
hgvsc: ENST00000371710.3:c.471T>A
hgvsp: ENST00000371710.3:c.471T>A(p.%3D)
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: synonymous_variant
consequence: splice_region_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433675
ensembl transcript: ENST00000530544
gene symbol: OSBPL9
hgvsc: ENST00000530544.1:c.213T>A
hgvsp: ENST00000530544.1:c.213T>A(p.%3D)
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: synonymous_variant
consequence: splice_region_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000360779
ensembl transcript: ENST00000371714
gene symbol: OSBPL9
hgvsc: ENST00000371714.1:c.417T>A
hgvsp: ENST00000371714.1:c.417T>A(p.%3D)
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: synonymous_variant
consequence: splice_region_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000407168
ensembl transcript: ENST00000428468
gene symbol: OSBPL9
hgvsc: ENST00000428468.1:c.417T>A
hgvsp: ENST00000428468.1:c.417T>A(p.%3D)
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: synonymous_variant
consequence: splice_region_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000354970
ensembl transcript: ENST00000361556
gene symbol: OSBPL9
hgvsc: ENST00000361556.5:c.126T>A
hgvsp: ENST00000361556.5:c.126T>A(p.%3D)
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433083
ensembl transcript: ENST00000531828
gene symbol: OSBPL9
hgvsc: ENST00000531828.1:c.-79T>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 3_prime_UTR_variant
consequence: splice_region_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000390113
ensembl transcript: ENST00000435274
gene symbol: OSBPL9
hgvsc: ENST00000435274.2:c.*368T>A
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 802
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1307
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6221
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 179
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 628
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 102
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1633
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7886
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15724
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 190
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3066
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 974
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 432
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4972
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14008
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1949
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 331
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4538
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3844
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7368
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2886
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22508
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2809
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1735
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14634
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.974e0

VQSLOD
type: SiteQuality
SIO_000300: 7.55e-1

DP
type: SiteQuality
SIO_000300: 2.33853e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.51e-1

QD
type: SiteQuality
SIO_000300: 1.348e1

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433083
ensembl transcript: ENST00000531828
gene symbol: OSBPL9
hgvsc: ENST00000531828.1:c.-76T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000431980
ensembl transcript: ENST00000486942
gene symbol: OSBPL9
hgvsc: ENST00000486942.1:c.-76T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000484890
gene symbol: OSBPL9
hgvsc: ENST00000484890.1:n.179T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000467064
gene symbol: OSBPL9
hgvsc: ENST00000467064.1:n.548T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 3_prime_UTR_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435264
ensembl transcript: ENST00000495776
gene symbol: OSBPL9
hgvsc: ENST00000495776.1:c.*137T>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 6241
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7888
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 172
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4971
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1949
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1635
bin: 9.75e1
variant carriers: 8

GenotypeDepth
all individuals: 94
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3066
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 257
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 801
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15731
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 974
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1307
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 14010
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 433
bin: 7.75e1
variant carriers: 2

GenotypeDepth
all individuals: 180
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 626
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2887
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2809
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22531
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7368
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4539
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14635
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1735
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3844
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.101723413198823e-4
allele num: 66612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.704968944099378e-5
allele num: 10304
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.333e1

MQ
type: SiteQuality
SIO_000300: 5.972e1

VQSLOD
type: SiteQuality
SIO_000300: 2.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

DP
type: SiteQuality
SIO_000300: 2.3391e6

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000407168
ensembl transcript: ENST00000428468
gene symbol: OSBPL9
hgvsc: ENST00000428468.1:c.451G>A
hgvsp: ENSP00000407168.1:p.Glu151Lys
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 3_prime_UTR_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435264
ensembl transcript: ENST00000495776
gene symbol: OSBPL9
hgvsc: ENST00000495776.1:c.*168G>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000524620
gene symbol: OSBPL9
hgvsc: ENST00000524620.1:n.72G>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433083
ensembl transcript: ENST00000531828
gene symbol: OSBPL9
hgvsc: ENST00000531828.1:c.-45G>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435129
ensembl transcript: ENST00000527631
gene symbol: OSBPL9
hgvsc: ENST00000527631.1:c.-45G>A
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 801
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6223
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15797
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4972
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1627
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1306
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 93
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 129
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 14016
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3070
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 625
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 431
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 974
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1949
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7889
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 179
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22602
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3844
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7371
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1736
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2885
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4530
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14624
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2810
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.688044952528579e-5
allele num: 10322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.122e0

FS
type: SiteQuality
SIO_000300: 2.636e0

DP
type: SiteQuality
SIO_000300: 2.339118e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.679e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.71e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.88e-1

MQ
type: SiteQuality
SIO_000300: 5.616e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e-1

QD
type: SiteQuality
SIO_000300: 1.209e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
consequence: splice_region_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000484890
gene symbol: OSBPL9
hgvsc: ENST00000484890.1:n.220A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: missense_variant
consequence: splice_region_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433675
ensembl transcript: ENST00000530544
gene symbol: OSBPL9
hgvsc: ENST00000530544.1:c.257A>G
hgvsp: ENSP00000433675.1:p.Lys86Arg
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433279
ensembl transcript: ENST00000462759
gene symbol: OSBPL9
hgvsc: ENST00000462759.1:c.-35A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435129
ensembl transcript: ENST00000527631
gene symbol: OSBPL9
hgvsc: ENST00000527631.1:c.-35A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000431980
ensembl transcript: ENST00000486942
gene symbol: OSBPL9
hgvsc: ENST00000486942.1:c.-35A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
consequence: splice_region_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000524620
gene symbol: OSBPL9
hgvsc: ENST00000524620.1:n.82A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
consequence: splice_region_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.320A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000432801
ensembl transcript: ENST00000532975
gene symbol: OSBPL9
hgvsc: ENST00000532975.1:c.-35A>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 625
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6131
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 142
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7887
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 147
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 15823
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1949
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1307
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 973
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 179
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4971
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3070
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 39
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1627
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14005
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 431
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 801
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22544
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2881
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1736
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14623
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3840
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2810
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7364
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4528
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.689922480620155e-5
allele num: 10320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

QD
type: SiteQuality
SIO_000300: 1.296e1

VQSLOD
type: SiteQuality
SIO_000300: 2.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.21e-1

FS
type: SiteQuality
SIO_000300: 7.782e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.446e0

DP
type: SiteQuality
SIO_000300: 2.33832e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.98e0

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000360775
ensembl transcript: ENST00000371710
gene symbol: OSBPL9
hgvsc: ENST00000371710.3:c.516+3A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: true
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000412733
ensembl transcript: ENST00000447887
gene symbol: OSBPL9
hgvsc: ENST00000447887.1:c.531+3A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000413263
ensembl transcript: ENST00000453295
gene symbol: OSBPL9
hgvsc: ENST00000453295.1:c.411+3A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000431980
ensembl transcript: ENST00000486942
gene symbol: OSBPL9
hgvsc: ENST00000486942.1:c.-34+3A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000407168
ensembl transcript: ENST00000428468
gene symbol: OSBPL9
hgvsc: ENST00000428468.1:c.462+3A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000402646
ensembl transcript: ENST00000435686
gene symbol: OSBPL9
hgvsc: ENST00000435686.2:c.-34+3A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433675
ensembl transcript: ENST00000530544
gene symbol: OSBPL9
hgvsc: ENST00000530544.1:c.258+3A>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 330
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 625
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1306
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6062
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 170
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 202
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 430
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 179
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 801
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1949
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3069
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7889
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15801
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14003
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4970
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 973
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1627
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4525
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22442
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1737
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7359
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14621
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 38
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2810
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2879
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3838
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.003724618526973e-5
allele num: 66584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.94e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

QD
type: SiteQuality
SIO_000300: 1.403e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.2e-2

DP
type: SiteQuality
SIO_000300: 2.337151e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.95e0

MQRankSum
type: SiteQuality
SIO_000300: 5.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.37e-1

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435627
ensembl transcript: ENST00000534040
gene symbol: OSBPL9
hgvsc: ENST00000534040.1:c.-34+10A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433279
ensembl transcript: ENST00000462759
gene symbol: OSBPL9
hgvsc: ENST00000462759.1:c.-34+10A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433083
ensembl transcript: ENST00000531828
gene symbol: OSBPL9
hgvsc: ENST00000531828.1:c.-34+10A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000360775
ensembl transcript: ENST00000371710
gene symbol: OSBPL9
hgvsc: ENST00000371710.3:c.516+10A>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 15804
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7884
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3070
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 178
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 973
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 295
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13985
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 801
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 74
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4966
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1948
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5943
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 430
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1306
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1627
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 625
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7338
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2809
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3833
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2869
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4523
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14617
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22346
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1736
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502674761074713e-5
allele num: 66548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.86e-1

QD
type: SiteQuality
SIO_000300: 1.731e1

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

DP
type: SiteQuality
SIO_000300: 2.335271e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.89e0

VQSLOD
type: SiteQuality
SIO_000300: 8.03e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435627
ensembl transcript: ENST00000534040
gene symbol: OSBPL9
hgvsc: ENST00000534040.1:c.-34+14C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000402646
ensembl transcript: ENST00000435686
gene symbol: OSBPL9
hgvsc: ENST00000435686.2:c.-34+14C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000337265
ensembl transcript: ENST00000337809
gene symbol: OSBPL9
hgvsc: ENST00000337809.4:c.516+14C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000484890
gene symbol: OSBPL9
hgvsc: ENST00000484890.1:n.221+14C>T
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 1948
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 7877
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13957
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 973
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 115
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3069
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15736
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 237
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5814
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 178
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1306
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 801
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1627
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 624
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 445
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 430
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4967
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14615
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2807
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3835
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1734
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7314
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22126
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2864
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4519
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503578516870151e-5
allele num: 66508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.546e0

DP
type: SiteQuality
SIO_000300: 2.332141e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.12e-1

QD
type: SiteQuality
SIO_000300: 1.124e1

VQSLOD
type: SiteQuality
SIO_000300: -9.643e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.603e0

MQRankSum
type: SiteQuality
SIO_000300: 2.36e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000524620
gene symbol: OSBPL9
hgvsc: ENST00000524620.1:n.83+19C>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000402646
ensembl transcript: ENST00000435686
gene symbol: OSBPL9
hgvsc: ENST00000435686.2:c.-34+19C>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000390113
ensembl transcript: ENST00000435274
gene symbol: OSBPL9
hgvsc: ENST00000435274.2:c.*413+19C>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000473207
gene symbol: OSBPL9
hgvsc: ENST00000473207.2:n.321+19C>A
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 315
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1305
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 624
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 973
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7844
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 801
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5491
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3067
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4958
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 328
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1948
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13814
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 879
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 429
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 270
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1627
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15572
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 178
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21447
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2849
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2806
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3828
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7235
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14607
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4507
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.879e1

QD
type: SiteQuality
SIO_000300: 6.73e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.57e0

MQRankSum
type: SiteQuality
SIO_000300: 3.37e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.192e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.322489e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.68e-1

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000390113
ensembl transcript: ENST00000435274
gene symbol: OSBPL9
hgvsc: ENST00000435274.2:c.*413+23T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000524620
gene symbol: OSBPL9
hgvsc: ENST00000524620.1:n.83+23T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000431274
ensembl transcript: ENST00000533884
gene symbol: OSBPL9
hgvsc: ENST00000533884.1:c.171+23T>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433279
ensembl transcript: ENST00000462759
gene symbol: OSBPL9
hgvsc: ENST00000462759.1:c.-34+23T>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 1947
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1627
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 256
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13587
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 478
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7776
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5280
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4939
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 178
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1305
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1307
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 973
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3066
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 368
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 429
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 328
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 801
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 624
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15405
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20806
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2805
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14607
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2848
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7196
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1108
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4501
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3826
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506704836522525e-5
allele num: 66370
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.52e-1

DP
type: SiteQuality
SIO_000300: 2.311892e6

MQ
type: SiteQuality
SIO_000300: 5.926e1

MQRankSum
type: SiteQuality
SIO_000300: 7.15e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.13e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 6.53e0

QD
type: SiteQuality
SIO_000300: 1.725e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.99e-1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433279
ensembl transcript: ENST00000462759
gene symbol: OSBPL9
hgvsc: ENST00000462759.1:c.-34+25A>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000432801
ensembl transcript: ENST00000532975
gene symbol: OSBPL9
hgvsc: ENST00000532975.1:c.-34+25A>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435627
ensembl transcript: ENST00000534040
gene symbol: OSBPL9
hgvsc: ENST00000534040.1:c.-34+25A>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000360779
ensembl transcript: ENST00000371714
gene symbol: OSBPL9
hgvsc: ENST00000371714.1:c.462+25A>T
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 328
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7746
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 625
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13464
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5199
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 633
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 178
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1305
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1516
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15265
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 429
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 383
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1947
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4929
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 973
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3065
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1626
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 801
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14603
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4497
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2841
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20429
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3823
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1732
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7174
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1210
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2803
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16286
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.659508139937652e-5
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.69e0

QD
type: SiteQuality
SIO_000300: 1.238e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.62e-1

DP
type: SiteQuality
SIO_000300: 2.306003e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433675
ensembl transcript: ENST00000530544
gene symbol: OSBPL9
hgvsc: ENST00000530544.1:c.258+26C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000407168
ensembl transcript: ENST00000428468
gene symbol: OSBPL9
hgvsc: ENST00000428468.1:c.462+26C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435247
ensembl transcript: ENST00000481937
gene symbol: OSBPL9
hgvsc: ENST00000481937.1:c.-121+26C>T
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000435429
ensembl transcript: ENST00000526917
gene symbol: OSBPL9
hgvsc: ENST00000526917.1:c.171+26C>T
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 1648
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 801
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 973
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 178
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1626
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4931
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 13432
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 742
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3064
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 390
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5092
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 328
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1947
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 429
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 625
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7741
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15157
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1304
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1269
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3813
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20118
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2834
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7132
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4485
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1731
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2802
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14598
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 113
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.149305128520478e-5
allele num: 16262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.75800156128025e-5
allele num: 10248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66314
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.24e0

MQRankSum
type: SiteQuality
SIO_000300: 1.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.25e0

DP
type: SiteQuality
SIO_000300: 2.303022e6

MQ
type: SiteQuality
SIO_000300: 5.978e1

FS
type: SiteQuality
SIO_000300: 2.668e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.8e-2

QD
type: SiteQuality
SIO_000300: 1.24e1

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000431274
ensembl transcript: ENST00000533884
gene symbol: OSBPL9
hgvsc: ENST00000533884.1:c.171+27G>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433279
ensembl transcript: ENST00000462759
gene symbol: OSBPL9
hgvsc: ENST00000462759.1:c.-34+27G>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000337265
ensembl transcript: ENST00000337809
gene symbol: OSBPL9
hgvsc: ENST00000337809.4:c.516+27G>A
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000484890
gene symbol: OSBPL9
hgvsc: ENST00000484890.1:n.221+27G>A
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 857
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15074
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1947
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 801
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5048
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 178
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 972
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 401
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1787
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1305
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 429
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7720
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13325
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3059
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1625
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 625
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4926
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2820
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1731
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14592
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1340
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3798
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19993
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2799
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7110
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4470
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507977199384745e-5
allele num: 66314
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16266
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.48e-1

DP
type: SiteQuality
SIO_000300: 2.298895e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.784e0

QD
type: SiteQuality
SIO_000300: 1.205e1

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

MQRankSum
type: SiteQuality
SIO_000300: -6.5e-2

FS
type: SiteQuality
SIO_000300: 1.528e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl transcript: ENST00000467064
gene symbol: OSBPL9
hgvsc: ENST00000467064.1:n.590+30A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000431980
ensembl transcript: ENST00000486942
gene symbol: OSBPL9
hgvsc: ENST00000486942.1:c.-34+30A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000433279
ensembl transcript: ENST00000462759
gene symbol: OSBPL9
hgvsc: ENST00000462759.1:c.-34+30A>G
variant of: http://identifiers.org/hgnc/16386

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000117859
ensembl protein: ENSP00000431274
ensembl transcript: ENST00000533884
gene symbol: OSBPL9
hgvsc: ENST00000533884.1:c.171+30A>G
variant of: http://identifiers.org/hgnc/16386

GenotypeDepth
all individuals: 432
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2329
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 178
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4904
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1619
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1625
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4770
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14752
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12779
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 972
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 626
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 801
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1304
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1946
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7555
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3054
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 428
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19090
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1580
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3783
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6618
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2722
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1730
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2798
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4405
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14590
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 50
bin: 7.5e0
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16248
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508978421608571e-5
allele num: 66270
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.18e0

QD
type: SiteQuality
SIO_000300: 1.543e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.03e-1

DP
type: SiteQuality
SIO_000300: 2.279171e6

MQRankSum
type: SiteQuality
SIO_000300: -7.68e-1