19-55142413-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142413
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142413
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 96846
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-48-64C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-538C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-48-64C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-48-64C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-48-64C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.-4C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-538C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-538C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-48-64C>T
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 5271
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5037
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11814
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32200
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1481
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 931
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

19-55142419-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142419
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142419
    reference: chr 19
allele count: 10
allele frequency: 9.615939381118142e-5
allele num: 103994
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-48-58G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-532G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.3G>A
  hgvsp: ENSP00000395004.2:p.Met1?
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-532G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-48-58G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-48-58G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-48-58G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-48-58G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-532G>A
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8412
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3390
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6473
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2347
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 35930
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4564
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1323
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

19-55142422-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142422
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142422
    reference: chr 19
allele count: 1
allele frequency: 9.305095470279526e-6
allele num: 107468
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-48-55A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-48-55A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-48-55A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-48-55A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.6A>G
  hgvsp: ENST00000427581.2:c.6A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-529A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-529A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-48-55A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-529A>G
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6796
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37894
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2026
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35338
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg2Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

19-55142427-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142427
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142427
    reference: chr 19
allele count: 1
allele frequency: 8.95094880057286e-6
allele num: 111720
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-48-50G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.11G>A
  hgvsp: ENSP00000395004.2:p.Arg4Lys
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-524G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-48-50G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-48-50G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-524G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-524G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-48-50G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-48-50G>A
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2963
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4723
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7697
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39894
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1849
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2279
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37200
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg4Lys
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

19-55142431-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142431
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142431
    reference: chr 19
allele count: 3
allele frequency: 2.619492516983043e-5
allele num: 114526
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.15C>T
  hgvsp: ENST00000427581.2:c.15C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-48-46C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-48-46C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-520C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-520C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-48-46C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-48-46C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-520C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-48-46C>T
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3353
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8370
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40840
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3358
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5643
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2471
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3534
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1701
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38430
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr5Thr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum

19-55142439-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142439
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142439
    reference: chr 19
allele count: 13
allele frequency: 1.0958626968338e-4
allele num: 118628
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.23C>T
  hgvsp: ENSP00000395004.2:p.Pro8Leu
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-48-38C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-48-38C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-512C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-48-38C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-512C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-512C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-48-38C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-48-38C>T
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9368
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42234
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3981
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2822
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1451
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro8Leu
num of homozygotes: 1
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP

19-55142440-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142440
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142440
    reference: chr 19
allele count: 2
allele frequency: 1.677711601375723e-5
allele num: 119210
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-511G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.24G>A
  hgvsp: ENST00000427581.2:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-511G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-48-37G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-48-37G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-48-37G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-511G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-48-37G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-48-37G>A
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9510
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42341
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2718
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1134
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6318
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro8Pro
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-55142442-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142442
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142442
    reference: chr 19
allele count: 1
allele frequency: 8.353939717970996e-6
allele num: 119704
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-48-35T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-48-35T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-48-35T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-48-35T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.26T>C
  hgvsp: ENSP00000395004.2:p.Ile9Thr
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-48-35T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-509T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-509T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-509T>C
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9575
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42580
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile9Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

19-55142447-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142447
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142447
    reference: chr 19
allele count: 1
allele frequency: 8.305785810395521e-6
allele num: 120398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-504C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-48-30C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-48-30C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-48-30C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.31C>T
  hgvsp: ENSP00000395004.2:p.His11Tyr
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-48-30C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-504C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-48-30C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-504C>T
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42542
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4415
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9883
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2406
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
hgvs: p.His11Tyr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum

19-55142451-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142451
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142451
    reference: chr 19
allele count: 3
allele frequency: 2.486283999933699e-5
allele num: 120662
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-500C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-48-26C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-48-26C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-48-26C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-48-26C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-500C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.35C>G
  hgvsp: ENSP00000395004.2:p.Thr12Ser
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-48-26C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-500C>G
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9994
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr12Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

19-55142458-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142458
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142457
    reference: chr 19
allele count: 1
allele frequency: 8.268152729317216e-6
allele num: 120946
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-492delG
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-48-18delG
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-48-18delG
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-48-18delG
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-48-18delG
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-492delG
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.43delG
  hgvsp: ENSP00000395004.2:p.Val15SerfsTer23
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-48-18delG
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-492delG
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10110
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42587
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2848
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val15SerfsTer23
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: TG
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

19-55142459-GTC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142459
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142457
    reference: chr 19
allele count: 2
allele frequency: 1.653275138048474e-5
allele num: 120972
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-48-12_-48-11delCT
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-48-12_-48-11delCT
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-48-12_-48-11delCT
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-486_71-485delCT
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-486_71-485delCT
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-486_71-485delCT
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.49_50delCT
  hgvsp: ENSP00000395004.2:p.Leu17IlefsTer53
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-48-12_-48-11delCT
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-48-12_-48-11delCT
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42559
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4570
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2464
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2854
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu17IlefsTer53
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
reference allele: GTC
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

19-55142467-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142467
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142467
    reference: chr 19
allele count: 1
allele frequency: 8.250552787036732e-6
allele num: 121204
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-484A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-48-10A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-48-10A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-484A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.51A>G
  hgvsp: ENST00000427581.2:c.51A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-48-10A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-484A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-48-10A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-48-10A>G
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42587
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4617
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3113
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu17Leu
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

19-55142471-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142471
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142471
    reference: chr 19
allele count: 1
allele frequency: 8.246742536698004e-6
allele num: 121260
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-480T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-48-6T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-48-6T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.55T>C
  hgvsp: ENSP00000395004.2:p.Cys19Arg
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-480T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-480T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-48-6T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-48-6T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-48-6T>C
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42584
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Cys19Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

19-55142473-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142473
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142473
    reference: chr 19
allele count: 1
allele frequency: 8.244838730954422e-6
allele num: 121288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-48-4C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-478C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-48-4C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-478C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-48-4C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-48-4C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-48-4C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.57C>T
  hgvsp: ENST00000427581.2:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-478C>T
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4649
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41142
  bin: 6.25e1
  variant carriers: 0
hgvs: c.-48-4C>T
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

19-55142477-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142477
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142477
    reference: chr 19
allele count: 1
allele frequency: 8.241984669908513e-6
allele num: 121330
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-48C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-48C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-48C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-474C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.61C>T
  hgvsp: ENSP00000395004.2:p.His21Tyr
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-474C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-48C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-48C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-474C>T
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4651
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6675
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2334
  bin: 8.25e1
  variant carriers: 0
hgvs: p.His21Tyr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

19-55142479-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142479
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142479
    reference: chr 19
allele count: 1
allele frequency: 8.241712957621112e-6
allele num: 121334
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-46C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-472C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-46C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-472C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.63C>G
  hgvsp: ENSP00000395004.2:p.His21Gln
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-472C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-46C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-46C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-46C>G
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42568
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6676
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2890
  bin: 9.75e1
  variant carriers: 1
hgvs: p.His21Gln
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

19-55142480-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142480
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142480
    reference: chr 19
allele count: 1
allele frequency: 8.241712957621112e-6
allele num: 121334
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-471C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-45C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-45C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.64C>T
  hgvsp: ENSP00000395004.2:p.Arg22Ter
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-45C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-45C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-471C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-471C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-45C>T
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4659
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42563
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2335
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41158
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3136
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg22Ter
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-55142481-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142481
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142481
    reference: chr 19
allele count: 4
allele frequency: 3.296467834715103e-5
allele num: 121342
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-470G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-44G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-44G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.65G>A
  hgvsp: ENSP00000395004.2:p.Arg22Gln
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-44G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-470G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-44G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-44G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-470G>A
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10217
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3036
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg22Gln
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

19-55142481-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142481
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142481
    reference: chr 19
allele count: 155
allele frequency: 1.277381285952102e-3
allele num: 121342
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-44G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.65G>C
  hgvsp: ENSP00000395004.2:p.Arg22Pro
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-44G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-44G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-44G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-44G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-470G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-470G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-470G>C
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10217
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 9.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 4654
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 42464
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3036
  bin: 9.75e1
  variant carriers: 151
genotype quality: GenotypeQuality
  all individuals: 2329
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg22Pro
num of homozygotes: 4
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

19-55142481-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142481
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142481
    reference: chr 19
allele count: 1
allele frequency: 8.241169586787756e-6
allele num: 121342
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-470G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-44G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-44G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-44G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.65G>T
  hgvsp: ENSP00000395004.2:p.Arg22Leu
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-470G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-44G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-44G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-470G>T
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10217
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41063
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3128
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg22Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

19-55142483-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142483
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142483
    reference: chr 19
allele count: 1
allele frequency: 8.240897928238261e-6
allele num: 121346
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-468G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-42G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-42G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-42G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-468G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.67G>C
  hgvsp: ENSP00000395004.2:p.Gly23Arg
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-42G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-468G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-42G>C
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4659
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3133
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6653
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly23Arg
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/19-55142486-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142486
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142486
    reference: chr 19
allele count: 3
allele frequency: 2.472065658063878e-5
allele num: 121356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-39C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-39C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-39C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.70C>A
  hgvsp: ENSP00000395004.2:p.Leu24Ile
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-39C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-465C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-39C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-465C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-465C>A
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42456
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3137
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3029
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6655
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu24Ile
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum

19-55142488-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142488
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142488
    reference: chr 19
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-37C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-37C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-37C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-463C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.72C>T
  hgvsp: ENST00000427581.2:c.72C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-463C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-37C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-463C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-37C>T
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10224
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3025
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu24Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

19-55142497-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142497
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142497
    reference: chr 19
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-454A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-454A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-28A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-28A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-28A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-454A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.81A>G
  hgvsp: ENST00000427581.2:c.81A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-28A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-28A>G
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3034
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6660
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3136
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro27Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

19-55142501-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142501
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142501
    reference: chr 19
allele count: 2
allele frequency: 1.647772211969417e-5
allele num: 121376
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-450A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.85A>G
  hgvsp: ENSP00000395004.2:p.Ser29Gly
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-24A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-450A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-24A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-24A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-450A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-24A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-24A>G
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6656
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser29Gly
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS

19-55142501-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142501
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142501
    reference: chr 19
allele count: 2
allele frequency: 1.647772211969417e-5
allele num: 121376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.85A>T
  hgvsp: ENSP00000395004.2:p.Ser29Cys
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-24A>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-450A>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-24A>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-24A>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-24A>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-450A>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-450A>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-24A>T
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41076
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2486
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser29Cys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

19-55142506-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142506
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142506
    reference: chr 19
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-19G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.90G>A
  hgvsp: ENST00000427581.2:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-445G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-445G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-19G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-445G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-19G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-19G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-19G>A
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10247
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42426
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6657
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2484
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg30Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

19-55142506-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142506
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142506
    reference: chr 19
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-19G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.90G>T
  hgvsp: ENSP00000395004.2:p.Arg30Ser
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-445G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-19G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-19G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-19G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-19G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-445G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-445G>T
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10247
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42426
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3038
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2334
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg30Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

19-55142509-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142509
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142509
    reference: chr 19
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-16A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-16A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-442A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-16A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.93A>G
  hgvsp: ENST00000427581.2:c.93A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-16A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-16A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-442A>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-442A>G
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10248
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6658
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala31Ala
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

19-55142511-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142511
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142511
    reference: chr 19
allele count: 5
allele frequency: 4.119226903494752e-5
allele num: 121382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-14T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-14T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-14T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-440T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-14T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-14T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.95T>C
  hgvsp: ENSP00000395004.2:p.Val32Ala
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-440T>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-440T>C
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10247
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42421
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val32Ala
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

19-55142515-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142515
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142514
    reference: chr 19
allele count: 2
allele frequency: 1.647690761397901e-5
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-434delG
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-8delG
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.101delG
  hgvsp: ENSP00000395004.2:p.Gly34GlufsTer4
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-8delG
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-8delG
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-434delG
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-8delG
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-434delG
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-8delG
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10249
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2335
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly34GlufsTer4
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: AG
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

19-55142521-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142521
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142521
    reference: chr 19
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-430C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-4C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-4C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-430C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.105C>G
  hgvsp: ENSP00000395004.2:p.Asp35Glu
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-4C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-4C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-430C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-4C>G
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41054
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3135
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asp35Glu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

19-55142521-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142521
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142521
    reference: chr 19
allele count: 2
allele frequency: 1.64766361299677e-5
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-4C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-4C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-4C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.105C>T
  hgvsp: ENST00000427581.2:c.105C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-430C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-430C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-430C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-4C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-4C>T
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6656
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 918
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp35Asp
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

19-55142522-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142522
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142522
    reference: chr 19
allele count: 3
allele frequency: 2.471495419495156e-5
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-3G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-3G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-3G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.106G>A
  hgvsp: ENSP00000395004.2:p.Ala36Thr
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-429G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-3G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-429G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-3G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-429G>A
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2485
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala36Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

19-55142522-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142522
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142522
    reference: chr 19
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.106G>C
  hgvsp: ENSP00000395004.2:p.Ala36Pro
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-429G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-429G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-3G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-3G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-3G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-3G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-429G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-3G>C
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2335
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2485
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 918
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala36Pro
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/19-55142523-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142523
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142523
    reference: chr 19
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-2C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-2C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.107C>A
  hgvsp: ENSP00000395004.2:p.Ala36Asp
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-428C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-2C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-2C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-2C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-428C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-428C>A
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10253
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3052
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala36Asp
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD

19-55142524-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142524
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142524
    reference: chr 19
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.-1C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.-1C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.-1C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-427C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.108C>T
  hgvsp: ENST00000427581.2:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.-1C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.-1C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-427C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-427C>T
  variant of: http://identifiers.org/hgnc/6605
canonical: false
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10253
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala36Ala
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum

http://identifiers.org/exac.variant/19-55142529-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142529
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142529
    reference: chr 19
allele count: 9
allele frequency: 7.414608426290554e-5
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.5C>A
  hgvsp: ENSP00000315997.7:p.Thr2Asn
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.5C>A
  hgvsp: ENSP00000379623.4:p.Thr2Asn
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.5C>A
  hgvsp: ENSP00000405243.2:p.Thr2Asn
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-422C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.5C>A
  hgvsp: ENSP00000379610.1:p.Thr2Asn
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.113C>A
  hgvsp: ENSP00000395004.2:p.Thr38Asn
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.5C>A
  hgvsp: ENSP00000379608.1:p.Thr2Asn
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-422C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.5C>A
  hgvsp: ENSP00000410165.1:p.Thr2Asn
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-422C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.5C>A
  hgvsp: ENSP00000379618.3:p.Thr2Asn
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.5C>A
  hgvsp: ENSP00000379622.1:p.Thr2Asn
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42384
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr2Asn
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

19-55142532-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142532
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142532
    reference: chr 19
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.8C>T
  hgvsp: ENSP00000379618.3:p.Pro3Leu
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.116C>T
  hgvsp: ENSP00000395004.2:p.Pro39Leu
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.8C>T
  hgvsp: ENSP00000315997.7:p.Pro3Leu
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.8C>T
  hgvsp: ENSP00000405243.2:p.Pro3Leu
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-419C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.8C>T
  hgvsp: ENSP00000410165.1:p.Pro3Leu
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-419C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.8C>T
  hgvsp: ENSP00000379622.1:p.Pro3Leu
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.8C>T
  hgvsp: ENSP00000379608.1:p.Pro3Leu
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.8C>T
  hgvsp: ENSP00000379623.4:p.Pro3Leu
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.8C>T
  hgvsp: ENSP00000379610.1:p.Pro3Leu
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-419C>T
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4659
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro3Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

19-55142534-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142534
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142534
    reference: chr 19
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.10A>T
  hgvsp: ENSP00000379622.1:p.Ile4Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.10A>T
  hgvsp: ENSP00000379608.1:p.Ile4Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.10A>T
  hgvsp: ENSP00000379610.1:p.Ile4Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.118A>T
  hgvsp: ENSP00000395004.2:p.Ile40Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.10A>T
  hgvsp: ENSP00000315997.7:p.Ile4Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.10A>T
  hgvsp: ENSP00000379618.3:p.Ile4Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.10A>T
  hgvsp: ENSP00000379623.4:p.Ile4Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.10A>T
  hgvsp: ENSP00000410165.1:p.Ile4Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.10A>T
  hgvsp: ENSP00000405243.2:p.Ile4Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-417A>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-417A>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-417A>T
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile4Phe
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-55142536-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142536
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142536
    reference: chr 19
allele count: 622
allele frequency: 5.124402702257374e-3
allele num: 121380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-415C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.12C>G
  hgvsp: ENSP00000405243.2:p.Ile4Met
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-415C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.12C>G
  hgvsp: ENSP00000379623.4:p.Ile4Met
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.12C>G
  hgvsp: ENSP00000410165.1:p.Ile4Met
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.12C>G
  hgvsp: ENSP00000315997.7:p.Ile4Met
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.120C>G
  hgvsp: ENSP00000395004.2:p.Ile40Met
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-415C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.12C>G
  hgvsp: ENSP00000379622.1:p.Ile4Met
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.12C>G
  hgvsp: ENSP00000379618.3:p.Ile4Met
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.12C>G
  hgvsp: ENSP00000379610.1:p.Ile4Met
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.12C>G
  hgvsp: ENSP00000379608.1:p.Ile4Met
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 41987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 9.75e1
  variant carriers: 399
genotype quality: GenotypeQuality
hgvs: p.Ile4Met
num of homozygotes: 23
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

19-55142536-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142536
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142536
    reference: chr 19
allele count: 6
allele frequency: 4.943153732081068e-5
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.12C>T
  hgvsp: ENST00000396317.1:c.12C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.12C>T
  hgvsp: ENST00000434867.2:c.12C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-415C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.12C>T
  hgvsp: ENST00000396327.3:c.12C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.12C>T
  hgvsp: ENST00000396332.4:c.12C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.12C>T
  hgvsp: ENST00000324602.7:c.12C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-415C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.12C>T
  hgvsp: ENST00000396331.1:c.12C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.12C>T
  hgvsp: ENST00000421584.1:c.12C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.120C>T
  hgvsp: ENST00000427581.2:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.12C>T
  hgvsp: ENST00000396315.1:c.12C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-415C>T
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile4Ile
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD

19-55142537-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142537
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142537
    reference: chr 19
allele count: 4
allele frequency: 3.295435821387378e-5
allele num: 121380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.13C>G
  hgvsp: ENSP00000379618.3:p.Leu5Val
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.13C>G
  hgvsp: ENSP00000405243.2:p.Leu5Val
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.13C>G
  hgvsp: ENSP00000410165.1:p.Leu5Val
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-414C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.13C>G
  hgvsp: ENSP00000315997.7:p.Leu5Val
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.13C>G
  hgvsp: ENSP00000379608.1:p.Leu5Val
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-414C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-414C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.13C>G
  hgvsp: ENSP00000379623.4:p.Leu5Val
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.13C>G
  hgvsp: ENSP00000379610.1:p.Leu5Val
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.121C>G
  hgvsp: ENSP00000395004.2:p.Leu41Val
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.13C>G
  hgvsp: ENSP00000379622.1:p.Leu5Val
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41984
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4639
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu5Val
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD

19-55142537-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142537
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142537
    reference: chr 19
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-414C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.13C>T
  hgvsp: ENSP00000379610.1:p.Leu5Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.13C>T
  hgvsp: ENSP00000379608.1:p.Leu5Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-414C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.13C>T
  hgvsp: ENSP00000379623.4:p.Leu5Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.13C>T
  hgvsp: ENSP00000315997.7:p.Leu5Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.13C>T
  hgvsp: ENSP00000405243.2:p.Leu5Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.121C>T
  hgvsp: ENSP00000395004.2:p.Leu41Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-414C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.13C>T
  hgvsp: ENSP00000379622.1:p.Leu5Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.13C>T
  hgvsp: ENSP00000410165.1:p.Leu5Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.13C>T
  hgvsp: ENSP00000379618.3:p.Leu5Phe
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41984
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu5Phe
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

19-55142541-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142541
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142541
    reference: chr 19
allele count: 3
allele frequency: 2.47161759132627e-5
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.17C>T
  hgvsp: ENSP00000379623.4:p.Thr6Met
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.17C>T
  hgvsp: ENSP00000379618.3:p.Thr6Met
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.17C>T
  hgvsp: ENSP00000410165.1:p.Thr6Met
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.17C>T
  hgvsp: ENSP00000379622.1:p.Thr6Met
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.17C>T
  hgvsp: ENSP00000379608.1:p.Thr6Met
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-410C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.17C>T
  hgvsp: ENSP00000379610.1:p.Thr6Met
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.17C>T
  hgvsp: ENSP00000315997.7:p.Thr6Met
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-410C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.17C>T
  hgvsp: ENSP00000405243.2:p.Thr6Met
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.125C>T
  hgvsp: ENSP00000395004.2:p.Thr42Met
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-410C>T
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr6Met
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

19-55142542-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142542
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142542
    reference: chr 19
allele count: 23
allele frequency: 1.894906820016807e-4
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.126G>A
  hgvsp: ENST00000427581.2:c.126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.18G>A
  hgvsp: ENST00000434867.2:c.18G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.18G>A
  hgvsp: ENST00000396317.1:c.18G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.18G>A
  hgvsp: ENST00000396327.3:c.18G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.18G>A
  hgvsp: ENST00000396332.4:c.18G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.18G>A
  hgvsp: ENST00000421584.1:c.18G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-409G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.18G>A
  hgvsp: ENST00000324602.7:c.18G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.18G>A
  hgvsp: ENST00000396331.1:c.18G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-409G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.18G>A
  hgvsp: ENST00000396315.1:c.18G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-409G>A
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4637
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Thr6Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

19-55142546-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142546
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142546
    reference: chr 19
allele count: 2
allele frequency: 1.64774506088418e-5
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.22C>T
  hgvsp: ENST00000396331.1:c.22C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-405C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.22C>T
  hgvsp: ENST00000396332.4:c.22C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.22C>T
  hgvsp: ENST00000434867.2:c.22C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.22C>T
  hgvsp: ENST00000421584.1:c.22C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.22C>T
  hgvsp: ENST00000396317.1:c.22C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.130C>T
  hgvsp: ENST00000427581.2:c.130C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.22C>T
  hgvsp: ENST00000396315.1:c.22C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.22C>T
  hgvsp: ENST00000396327.3:c.22C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.22C>T
  hgvsp: ENST00000324602.7:c.22C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-405C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-405C>T
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu8Leu
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ

19-55142555-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142555
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142555
    reference: chr 19
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-396C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-396C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-396C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.31C>T
  hgvsp: ENSP00000315997.7:p.Leu11Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.31C>T
  hgvsp: ENSP00000379622.1:p.Leu11Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.31C>T
  hgvsp: ENSP00000379623.4:p.Leu11Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.31C>T
  hgvsp: ENSP00000379618.3:p.Leu11Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.31C>T
  hgvsp: ENSP00000379608.1:p.Leu11Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.31C>T
  hgvsp: ENSP00000405243.2:p.Leu11Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.31C>T
  hgvsp: ENSP00000410165.1:p.Leu11Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.31C>T
  hgvsp: ENSP00000379610.1:p.Leu11Phe
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.139C>T
  hgvsp: ENSP00000395004.2:p.Leu47Phe
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10168
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu11Phe
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

19-55142557-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142557
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142557
    reference: chr 19
allele count: 159
allele frequency: 1.310022080875325e-3
allele num: 121372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.33C>T
  hgvsp: ENST00000421584.1:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.33C>T
  hgvsp: ENST00000396327.3:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.33C>T
  hgvsp: ENST00000396315.1:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.141C>T
  hgvsp: ENST00000427581.2:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.33C>T
  hgvsp: ENST00000324602.7:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.33C>T
  hgvsp: ENST00000396332.4:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-394C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.33C>T
  hgvsp: ENST00000396317.1:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-394C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.33C>T
  hgvsp: ENST00000396331.1:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.33C>T
  hgvsp: ENST00000434867.2:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-394C>T
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4620
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 9.75e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 10146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
hgvs: c.33C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

19-55142558-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142558
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142558
    reference: chr 19
allele count: 5
allele frequency: 4.119634176485128e-5
allele num: 121370
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.142G>A
  hgvsp: ENSP00000395004.2:p.Gly48Arg
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.34G>A
  hgvsp: ENSP00000379608.1:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.34G>A
  hgvsp: ENSP00000405243.2:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-393G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.34G>A
  hgvsp: ENSP00000379622.1:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.34G>A
  hgvsp: ENSP00000410165.1:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.34G>A
  hgvsp: ENSP00000315997.7:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.34G>A
  hgvsp: ENSP00000379618.3:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-393G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.34G>A
  hgvsp: ENSP00000379610.1:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.34G>A
  hgvsp: ENSP00000379623.4:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-393G>A
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4631
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10142
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly12Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

19-55142558-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142558
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142558
    reference: chr 19
allele count: 2
allele frequency: 1.647853670594051e-5
allele num: 121370
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.142G>C
  hgvsp: ENSP00000395004.2:p.Gly48Arg
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.34G>C
  hgvsp: ENSP00000410165.1:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.34G>C
  hgvsp: ENSP00000379610.1:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.34G>C
  hgvsp: ENSP00000315997.7:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.34G>C
  hgvsp: ENSP00000379618.3:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-393G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.34G>C
  hgvsp: ENSP00000405243.2:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.34G>C
  hgvsp: ENSP00000379623.4:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.34G>C
  hgvsp: ENSP00000379608.1:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-393G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.34G>C
  hgvsp: ENSP00000379622.1:p.Gly12Arg
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-393G>C
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4631
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10142
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly12Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

19-55142568-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142568
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142568
    reference: chr 19
allele count: 2
allele frequency: 1.647880825258717e-5
allele num: 121368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-383G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.34+10G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.142+10G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.34+10G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.34+10G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-383G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.34+10G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.34+10G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.34+10G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-383G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.34+10G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.34+10G>A
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4633
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

19-55142582-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142582
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142582
    reference: chr 19
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.34+24G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.34+24G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.34+24G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-369G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.34+24G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.34+24G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.142+24G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.34+24G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.34+24G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-369G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.34+24G>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-369G>T
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4639
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-55142589-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142589
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142589
    reference: chr 19
allele count: 12
allele frequency: 9.887773767736194e-5
allele num: 121362
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-362A>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.34+31A>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.34+31A>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.34+31A>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.34+31A>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.34+31A>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-362A>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-362A>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.34+31A>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.34+31A>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.142+31A>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.34+31A>C
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10164
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

19-55142595-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142595
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142595
    reference: chr 19
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.34+37G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.34+37G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.34+37G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-356G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.34+37G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.34+37G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-356G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.34+37G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.34+37G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-356G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.34+37G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.142+37G>A
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

19-55142595-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142595
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142595
    reference: chr 19
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-356G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.34+37G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.34+37G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.34+37G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-356G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-356G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.34+37G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.34+37G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.34+37G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.34+37G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.34+37G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.142+37G>C
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

19-55142598-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142598
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142598
    reference: chr 19
allele count: 1
allele frequency: 8.241169586787756e-6
allele num: 121342
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.34+40G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.34+40G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.34+40G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-353G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-353G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.142+40G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-353G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.34+40G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.34+40G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.34+40G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.34+40G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.34+40G>A
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10107
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4647
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD

19-55142599-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142599
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142599
    reference: chr 19
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.34+41G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.34+41G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.142+41G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.34+41G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.34+41G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-352G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.34+41G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.34+41G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-352G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-352G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.34+41G>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.34+41G>A
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4659
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

19-55142601-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142601
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142601
    reference: chr 19
allele count: 3
allele frequency: 2.472147142197904e-5
allele num: 121352
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.34+43C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.34+43C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.34+43C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-350C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.34+43C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-350C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.34+43C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.34+43C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-350C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.142+43C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.34+43C>G
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.34+43C>G
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10126
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41283
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

19-55142604-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142604
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142604
    reference: chr 19
allele count: 1
allele frequency: 8.241305422778968e-6
allele num: 121340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-347C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.34+46C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.34+46C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.34+46C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.34+46C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.142+46C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-347C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.34+46C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.34+46C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.34+46C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-347C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.34+46C>T
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-55142608-C-CCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142608
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142610
    reference: chr 19
allele count: 1
allele frequency: 8.241712957621112e-6
allele num: 121334
alternate allele: CCA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.34+53_34+54dupCA
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.142+53_142+54dupCA
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.34+53_34+54dupCA
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.34+53_34+54dupCA
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.34+53_34+54dupCA
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-340_71-339dupCA
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-340_71-339dupCA
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.34+53_34+54dupCA
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.34+53_34+54dupCA
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.34+53_34+54dupCA
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.34+53_34+54dupCA
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-340_71-339dupCA
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41139
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum

19-55142608-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142608
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142608
    reference: chr 19
allele count: 1
allele frequency: 8.241712957621112e-6
allele num: 121334
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.34+50C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.142+50C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-343C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.34+50C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.34+50C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-343C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.34+50C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-343C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.34+50C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.34+50C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.34+50C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.34+50C>T
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41139
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

19-55142609-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142609
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142609
    reference: chr 19
allele count: 5
allele frequency: 4.120856478810556e-5
allele num: 121334
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.34+51C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.34+51C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-342C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.142+51C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-342C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.34+51C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.34+51C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.34+51C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-342C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.34+51C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.34+51C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.34+51C>T
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10250
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4723
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-55142673-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142673
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142673
    reference: chr 19
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.35-49C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.35-49C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.35-49C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.35-49C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.35-49C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.35-49C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.35-49C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.35-49C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-278C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.143-49C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-278C>A
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-278C>A
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11723
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4950
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3763
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4772
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4736
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff

19-55142677-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142677
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142677
    reference: chr 19
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.35-45C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.35-45C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-274C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.35-45C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.35-45C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.35-45C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.143-45C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.35-45C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-274C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-274C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.35-45C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.35-45C>T
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4950
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4772
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3763
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11723
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4736
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

19-55142678-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142678
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142678
    reference: chr 19
allele count: 3
allele frequency: 2.471658317954126e-5
allele num: 121376
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.35-44C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.35-44C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.35-44C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.35-44C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.143-44C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.35-44C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.35-44C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-273C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-273C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-273C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.35-44C>T
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.35-44C>T
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3763
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4738
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4950
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11723
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-55142682-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142682
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142682
    reference: chr 19
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.35-40G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-269G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379618
  ensembl transcript: ENST00000396327
  gene symbol: LILRB1
  hgvsc: ENST00000396327.3:c.35-40G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000405243
  ensembl transcript: ENST00000434867
  gene symbol: LILRB1
  hgvsc: ENST00000434867.2:c.35-40G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000391514
  ensembl transcript: ENST00000418536
  gene symbol: LILRB1
  hgvsc: ENST00000418536.2:c.71-269G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.35-40G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-269G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.143-40G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.35-40G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379622
  ensembl transcript: ENST00000396331
  gene symbol: LILRB1
  hgvsc: ENST00000396331.1:c.35-40G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.35-40G>C
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.35-40G>C
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4737
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4950
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3763
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11723
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2321
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4773
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/19-55142686-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55142686
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55142685
    reference: chr 19
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379610
  ensembl transcript: ENST00000396317
  gene symbol: LILRB1
  hgvsc: ENST00000396317.1:c.35-35delA
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000410165
  ensembl transcript: ENST00000421584
  gene symbol: LILRB1
  hgvsc: ENST00000421584.1:c.35-35delA
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000395004
  ensembl transcript: ENST00000427581
  gene symbol: LILRB1
  hgvsc: ENST00000427581.2:c.143-35delA
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000315997
  ensembl transcript: ENST00000324602
  gene symbol: LILRB1
  hgvsc: ENST00000324602.7:c.35-35delA
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379608
  ensembl transcript: ENST00000396315
  gene symbol: LILRB1
  hgvsc: ENST00000396315.1:c.35-35delA
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379623
  ensembl transcript: ENST00000396332
  gene symbol: LILRB1
  hgvsc: ENST00000396332.4:c.35-35delA
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000379614
  ensembl transcript: ENST00000396321
  gene symbol: LILRB1
  hgvsc: ENST00000396321.2:c.71-264delA
  variant of: http://identifiers.org/hgnc/6605
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104972
  ensembl protein: ENSP00000409968
  ensembl transcript: ENST00000448689
  gene symbol: LILRB1
  hgvsc: ENST00000448689.1:c.71-264delA
  variant of: http://identifiers.org/hgnc/6605
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
num of homozygotes: 0
reference allele: CA

GenotypeQuality
all individuals: 398
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2202
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1240
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12014
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1997
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29490
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1288
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3896
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2464
bin: 9.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54064
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11930
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9046
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6002
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6644
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.98e-1

DP
type: SiteQuality
SIO_000300: 1.219145e6

MQRankSum
type: SiteQuality
SIO_000300: 5.43e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.113e0

QD
type: SiteQuality
SIO_000300: 7.61e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

MQ
type: SiteQuality
SIO_000300: 5.682e1

GenotypeQuality
all individuals: 892
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32983
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1521
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2513
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 1204
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1842
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1564
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8641
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.614465611882467e-4
allele num: 6194
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13030
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9978
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8996
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.55703954880454e-4
allele num: 57802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7212
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQ
type: SiteQuality
SIO_000300: 5.83e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e-1

QD
type: SiteQuality
SIO_000300: 1.264e1

MQRankSum
type: SiteQuality
SIO_000300: 8.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.289e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-2

DP
type: SiteQuality
SIO_000300: 1.300475e6

GenotypeQuality
all individuals: 1674
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1198
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7033
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4882
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2531
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1356
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6280
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.633911368015414e-5
allele num: 10380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9260
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e0

QD
type: SiteQuality
SIO_000300: 1.984e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.336866e6

MQRankSum
type: SiteQuality
SIO_000300: 1.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.71e-1

MQ
type: SiteQuality
SIO_000300: 5.706e1

VQSLOD
type: SiteQuality
SIO_000300: -7.463e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-2

GenotypeQuality
all individuals: 355
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1545
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5318
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2563
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4913
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10840
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14320
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.616187736367456e-5
allele num: 61874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6400
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.041e0

MQ
type: SiteQuality
SIO_000300: 5.825e1

MQRankSum
type: SiteQuality
SIO_000300: 1.73e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

QD
type: SiteQuality
SIO_000300: 7.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.77e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.216e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e-1

DP
type: SiteQuality
SIO_000300: 1.386043e6

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2000
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2600
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 632
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11084
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63286
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.06435137895812e-4
allele num: 9790
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.357e1

FS
type: SiteQuality
SIO_000300: 5.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.2e-2

DP
type: SiteQuality
SIO_000300: 1.420638e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.92e-1

MQ
type: SiteQuality
SIO_000300: 5.902e1

VQSLOD
type: SiteQuality
SIO_000300: 3.0e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

GenotypeQuality
all individuals: 259
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2243
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6180
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2688
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 261
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40134
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 879
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2006
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 5
allele frequency: 4.378283712784588e-4
allele num: 11420
num of homozygotes: 1

African
type: Population
allele count: 2
allele frequency: 1.967342120794806e-4
allele num: 10166
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.169043722235212e-4
allele num: 8554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.650641123726168e-5
allele num: 65354
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.733e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e-1

MQ
type: SiteQuality
SIO_000300: 5.754e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.46e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.2e-2

QD
type: SiteQuality
SIO_000300: 1.768e1

DP
type: SiteQuality
SIO_000300: 1.473365e6

GenotypeQuality
all individuals: 40452
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 910
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2859
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2293
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2057
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 10218
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.522301720200944e-5
allele num: 65690
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15800
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.52114390021296e-4
allele num: 6574
num of homozygotes: 0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.949e1

FS
type: SiteQuality
SIO_000300: 3.237e0

QD
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SIO_000300: 1.318e1

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.51666818333485e-5
allele num: 65934
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: 2.24e0

FS
type: SiteQuality
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DP
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ReadPosRankSum
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MQ
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SIO_000300: 5.866e1

ClippingRankSum
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InbreedingCoeff
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MQRankSum
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QD
type: SiteQuality
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VQSLOD
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SIO_000300: -1.55e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.174364040503828e-5
allele num: 16196
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66242
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
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SIO_000300: -1.868e0

ClippingRankSum
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MQ
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SIO_000300: 5.858e1

ReadPosRankSum
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SIO_000300: 1.11e0

QD
type: SiteQuality
SIO_000300: 9.109999999999999e0

BaseQRankSum
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SIO_000300: 4.19e-1

DP
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SIO_000300: 1.499733e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.6e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.506477854775535e-5
allele num: 66380
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16276
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Latino
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allele count: 1
allele frequency: 8.676036786395974e-5
allele num: 11526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.67305088024763e-5
allele num: 10338
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.57e-1

DP
type: SiteQuality
SIO_000300: 1.504189e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.01e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.622e-1

QD
type: SiteQuality
SIO_000300: 1.584e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.4e-2

MQ
type: SiteQuality
SIO_000300: 5.879e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.46e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503940323647958e-5
allele num: 66492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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DP
type: SiteQuality
SIO_000300: 1.509189e6

MQ
type: SiteQuality
SIO_000300: 5.728e1

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.259e0

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -9.49e-1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.447e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503533303262667e-5
allele num: 66510
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.667013347200555e-5
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
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allele frequency: 0.0e0
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DP
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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MQRankSum
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ClippingRankSum
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QD
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InbreedingCoeff
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SIO_000300: -2.0e-4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10390
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500960614793468e-5
allele num: 66624
num of homozygotes: 0

East Asian
type: Population
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num of homozygotes: 0

MQ
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SIO_000300: 5.674e1

BaseQRankSum
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FS
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MQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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VQSLOD
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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South Asian
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East Asian
type: Population
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allele num: 8652
num of homozygotes: 0

Latino
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 904
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European (Non-Finnish)
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allele frequency: 0.0e0
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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DP
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MQRankSum
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MQ
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FS
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BaseQRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.06501698204755e-5
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num of homozygotes: 0

FS
type: SiteQuality
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DP
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MQ
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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QD
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ReadPosRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66684
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European (Finnish)
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allele frequency: 0.0e0
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African
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East Asian
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South Asian
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Latino
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DP
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QD
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VQSLOD
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MQ
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FS
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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East Asian
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European (Non-Finnish)
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South Asian
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Other
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InbreedingCoeff
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VQSLOD
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FS
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ReadPosRankSum
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BaseQRankSum
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QD
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MQ
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ClippingRankSum
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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South Asian
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East Asian
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InbreedingCoeff
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VQSLOD
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FS
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QD
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BaseQRankSum
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DP
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MQ
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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East Asian
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European (Finnish)
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South Asian
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European (Non-Finnish)
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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FS
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MQRankSum
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DP
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BaseQRankSum
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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European (Non-Finnish)
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South Asian
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Latino
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African
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European (Finnish)
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QD
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BaseQRankSum
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DP
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MQRankSum
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FS
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MQ
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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East Asian
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Latino
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South Asian
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African
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DP
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FS
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MQ
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MQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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European (Finnish)
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East Asian
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Latino
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South Asian
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ClippingRankSum
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MQRankSum
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FS
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BaseQRankSum
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DP
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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QD
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VQSLOD
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DP
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ClippingRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
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African
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allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
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QD
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BaseQRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQ
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ReadPosRankSum
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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East Asian
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ClippingRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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FS
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MQRankSum
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QD
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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African
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East Asian
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European (Finnish)
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MQ
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VQSLOD
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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QD
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InbreedingCoeff
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BaseQRankSum
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DP
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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FS
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MQRankSum
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ReadPosRankSum
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MQ
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DP
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16510
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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ReadPosRankSum
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MQ
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InbreedingCoeff
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QD
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VQSLOD
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MQRankSum
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FS
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BaseQRankSum
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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num of homozygotes: 0

Other
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European (Finnish)
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East Asian
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Latino
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African
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South Asian
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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MQ
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DP
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FS
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MQRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Non-Finnish)
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South Asian
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Latino
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European (Finnish)
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East Asian
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InbreedingCoeff
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MQRankSum
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DP
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ClippingRankSum
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FS
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ReadPosRankSum
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MQ
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VQSLOD
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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South Asian
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European (Non-Finnish)
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European (Finnish)
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VQSLOD
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MQ
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
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DP
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MQRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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South Asian
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African
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Latino
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European (Non-Finnish)
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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QD
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MQRankSum
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MQ
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FS
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ClippingRankSum
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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African
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ReadPosRankSum
type: SiteQuality
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MQ
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QD
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VQSLOD
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BaseQRankSum
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FS
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

European (Finnish)
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allele num: 6614
num of homozygotes: 0

Other
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East Asian
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allele num: 8654
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South Asian
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Latino
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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allele num: 66718
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ReadPosRankSum
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MQ
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BaseQRankSum
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FS
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DP
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 2.997691777331455e-5
allele num: 66718
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele num: 16510
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Latino
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num of homozygotes: 0

African
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Other
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East Asian
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DP
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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MQ
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ClippingRankSum
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MQRankSum
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FS
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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European (Finnish)
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allele count: 0
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African
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allele frequency: 9.611687812379854e-5
allele num: 10404
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Latino
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Other
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ClippingRankSum
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SIO_000300: -3.5e-2

BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 1.873e0

MQRankSum
type: SiteQuality
SIO_000300: 9.27e-1

ReadPosRankSum
type: SiteQuality
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DP
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SIO_000300: 1.526831e6

QD
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MQ
type: SiteQuality
SIO_000300: 5.415e1

InbreedingCoeff
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SIO_000300: 3.0e-4

VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66718
num of homozygotes: 0

Other
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European (Finnish)
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African
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South Asian
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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FS
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MQ
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VQSLOD
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BaseQRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele num: 8654
num of homozygotes: 0

European (Finnish)
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European (Non-Finnish)
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African
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Other
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Latino
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South Asian
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MQ
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VQSLOD
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FS
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BaseQRankSum
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ClippingRankSum
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QD
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ReadPosRankSum
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InbreedingCoeff
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DP
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Other
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Latino
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European (Finnish)
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South Asian
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European (Non-Finnish)
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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MQ
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FS
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ClippingRankSum
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QD
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BaseQRankSum
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MQRankSum
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DP
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Other
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European (Non-Finnish)
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East Asian
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Latino
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South Asian
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QD
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InbreedingCoeff
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DP
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
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MQ
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BaseQRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16510
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European (Finnish)
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European (Non-Finnish)
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East Asian
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African
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Latino
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Other
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BaseQRankSum
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DP
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MQ
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QD
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VQSLOD
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FS
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

European (Non-Finnish)
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African
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allele frequency: 5.690119184928873e-2
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East Asian
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Other
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European (Finnish)
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Latino
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allele num: 11578
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QD
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ReadPosRankSum
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MQRankSum
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DP
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MQ
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FS
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -1.72e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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African
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Latino
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European (Non-Finnish)
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Other
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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FS
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

South Asian
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East Asian
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Other
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Latino
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African
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European (Non-Finnish)
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FS
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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DP
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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Other
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Latino
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European (Non-Finnish)
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European (Finnish)
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ClippingRankSum
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MQ
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VQSLOD
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QD
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DP
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InbreedingCoeff
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BaseQRankSum
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FS
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MQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

Other
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African
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European (Finnish)
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East Asian
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European (Non-Finnish)
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South Asian
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ReadPosRankSum
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ClippingRankSum
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QD
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FS
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MQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

South Asian
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Other
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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BaseQRankSum
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DP
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QD
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InbreedingCoeff
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FS
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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MQ
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MQRankSum
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GenotypeDepth
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bin: 9.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3556
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1037
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.556962e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-2

BaseQRankSum
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SIO_000300: -2.364e0

InbreedingCoeff
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SIO_000300: 0.0e0

MQRankSum
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SIO_000300: 1.51e0

QD
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SIO_000300: 1.215e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.22e0

VQSLOD
type: SiteQuality
SIO_000300: -5.512e-1

FS
type: SiteQuality
SIO_000300: 3.065e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

GenotypeDepth
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bin: 8.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.556829e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.951e0

MQRankSum
type: SiteQuality
SIO_000300: -5.36e-1

QD
type: SiteQuality
SIO_000300: 1.37e1

ClippingRankSum
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SIO_000300: 5.85e-1

MQ
type: SiteQuality
SIO_000300: 5.642e1

FS
type: SiteQuality
SIO_000300: 2.643e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.068e0

VQSLOD
type: SiteQuality
SIO_000300: -1.535e0

GenotypeDepth
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bin: 7.75e1
variant carriers: 6

GenotypeDepth
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variant carriers: 12

GenotypeDepth
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variant carriers: 3

GenotypeDepth
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variant carriers: 10

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 159

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998231043684226e-5
allele num: 66706
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.922337562475971e-4
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 154
allele frequency: 1.779523919574763e-2
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.93e-1

MQ
type: SiteQuality
SIO_000300: 5.552e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.07e-1

DP
type: SiteQuality
SIO_000300: 1.570958e6

QD
type: SiteQuality
SIO_000300: 1.21e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

FS
type: SiteQuality
SIO_000300: 5.38e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.51e-1

GenotypeDepth
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bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
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variant carriers: 0

GenotypeDepth
all individuals: 363
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variant carriers: 3

GenotypeDepth
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variant carriers: 1

GenotypeDepth
all individuals: 214
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 14
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.047777441790142e-4
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.497e1

DP
type: SiteQuality
SIO_000300: 1.56488e6

BaseQRankSum
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SIO_000300: -4.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.26e-1

QD
type: SiteQuality
SIO_000300: 1.304e1

FS
type: SiteQuality
SIO_000300: 1.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -6.63e-2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 2

GenotypeDepth
all individuals: 102
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GenotypeDepth
all individuals: 151
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GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
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GenotypeQuality
all individuals: 913
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.47e-1

InbreedingCoeff
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FS
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BaseQRankSum
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DP
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MQRankSum
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SIO_000300: 5.26e-1

MQ
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SIO_000300: 5.497e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

QD
type: SiteQuality
SIO_000300: 1.304e1

VQSLOD
type: SiteQuality
SIO_000300: -6.63e-2

GenotypeDepth
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.742e1

FS
type: SiteQuality
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
type: SiteQuality
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QD
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SIO_000300: 1.068e1

DP
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SIO_000300: 1.564422e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

FS
type: SiteQuality
SIO_000300: 2.612e0

MQ
type: SiteQuality
SIO_000300: 5.706e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.295e0

QD
type: SiteQuality
SIO_000300: 1.27e1

VQSLOD
type: SiteQuality
SIO_000300: -3.246e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

DP
type: SiteQuality
SIO_000300: 1.563721e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.27e-1

GenotypeDepth
all individuals: 102
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3106
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 12

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 2316
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.246417013407304e-4
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.49748141041017e-5
allele num: 66704
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.41e-1

DP
type: SiteQuality
SIO_000300: 1.563772e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-2

BaseQRankSum
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SIO_000300: 4.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

QD
type: SiteQuality
SIO_000300: 1.348e1

VQSLOD
type: SiteQuality
SIO_000300: -7.638e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.35e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.88e-1

MQ
type: SiteQuality
SIO_000300: 5.625e1

GenotypeDepth
all individuals: 104
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.601e1

FS
type: SiteQuality
SIO_000300: 5.238e0

BaseQRankSum
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SIO_000300: -3.336e0

InbreedingCoeff
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SIO_000300: 1.7e-3

MQRankSum
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SIO_000300: 2.1e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.388e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.38e-1

DP
type: SiteQuality
SIO_000300: 1.563376e6

QD
type: SiteQuality
SIO_000300: 1.381e1

GenotypeDepth
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 39872
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3709
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.38e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.388e-1

MQ
type: SiteQuality
SIO_000300: 5.601e1

DP
type: SiteQuality
SIO_000300: 1.563376e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.02e-1

BaseQRankSum
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SIO_000300: -3.336e0

MQRankSum
type: SiteQuality
SIO_000300: 2.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

FS
type: SiteQuality
SIO_000300: 5.238e0

QD
type: SiteQuality
SIO_000300: 1.381e1

GenotypeDepth
all individuals: 102
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.337e1

BaseQRankSum
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SIO_000300: -5.226e0

InbreedingCoeff
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SIO_000300: 6.2e-3

MQ
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SIO_000300: 5.626e1

MQRankSum
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SIO_000300: 5.4e-1

ClippingRankSum
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SIO_000300: -1.042e0

ReadPosRankSum
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SIO_000300: 9.83e-1

DP
type: SiteQuality
SIO_000300: 1.563399e6

FS
type: SiteQuality
SIO_000300: 3.545e0

VQSLOD
type: SiteQuality
SIO_000300: -1.016e0

GenotypeDepth
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6559
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.388e1

QD
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ClippingRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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DP
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ReadPosRankSum
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.497885993583016e-5
allele num: 66698
num of homozygotes: 0

South Asian
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MQ
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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BaseQRankSum
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DP
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3141
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
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MQRankSum
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VQSLOD
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ReadPosRankSum
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DP
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FS
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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Latino
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European (Finnish)
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African
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South Asian
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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MQRankSum
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DP
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FS
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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African
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European (Finnish)
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East Asian
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Latino
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Other
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ClippingRankSum
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FS
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InbreedingCoeff
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MQ
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VQSLOD
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QD
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BaseQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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Latino
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South Asian
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European (Non-Finnish)
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European (Finnish)
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FS
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BaseQRankSum
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QD
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MQ
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DP
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MQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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European (Non-Finnish)
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South Asian
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African
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East Asian
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VQSLOD
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ReadPosRankSum
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QD
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MQRankSum
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MQ
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BaseQRankSum
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FS
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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African
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European (Finnish)
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European (Non-Finnish)
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Latino
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South Asian
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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DP
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MQ
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VQSLOD
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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East Asian
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European (Finnish)
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African
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South Asian
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MQ
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MQRankSum
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VQSLOD
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FS
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DP
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InbreedingCoeff
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QD
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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South Asian
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Latino
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Other
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European (Non-Finnish)
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European (Finnish)
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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MQRankSum
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MQ
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DP
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FS
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VQSLOD
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