http://identifiers.org/exac.variant/16-30770453-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770453
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770453
    reference: chr 16
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1516-31G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2035C>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.728-31G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1528+46G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1775G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1212-31G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.258+46G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-987C>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.923-31G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.*48+46G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.880-31G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1152G>T
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28600
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10756
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3467
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1775
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS

16-30770455-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770455
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770455
    reference: chr 16
allele count: 2
allele frequency: 1.647799363949445e-5
allele num: 121374
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1528+44G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.923-33G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.728-33G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-985C>G
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1150G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2037C>G
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1212-33G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1773G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.*48+44G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.880-33G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1516-33G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.258+44G>C
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28603
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1775
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10753
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

16-30770456-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770456
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770456
    reference: chr 16
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.*48+43G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.258+43G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2038C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1212-34G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-984C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.923-34G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1772G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.728-34G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1528+43G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1149G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.880-34G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1516-34G>A
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10753
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD

16-30770463-G-GGCCCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770463
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770468
    reference: chr 16
allele count: 2
allele frequency: 1.647582173160887e-5
allele num: 121390
alternate allele: GGCCCA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1528+31_1528+35dupTGGGC
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-967_1084-963dupAGCCC
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.727+31_727+35dupTGGGC
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2055_*2059dupAGCCC
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1515+31_1515+35dupTGGGC
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.*48+31_*48+35dupTGGGC
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1137_276+1141dupTGGGC
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1760_1764dupTGGGC
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1211+31_1211+35dupTGGGC
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.879+31_879+35dupTGGGC
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.258+31_258+35dupTGGGC
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.922+31_922+35dupTGGGC
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28630
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

16-30770466-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770466
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770466
    reference: chr 16
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1211+33G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.922+33G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-974C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1528+33G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1515+33G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.727+33G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.*48+33G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1762G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2048C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.258+33G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1139G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.879+33G>A
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum

16-30770468-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770468
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770468
    reference: chr 16
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1760T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2050A>G
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.727+31T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.922+31T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.879+31T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-972A>G
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1211+31T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1528+31T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1137T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.*48+31T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.258+31T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1515+31T>C
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10762
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28629
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

16-30770469-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770469
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770469
    reference: chr 16
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1759C>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.922+30C>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1528+30C>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.879+30C>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2051G>C
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-971G>C
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1136C>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.727+30C>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.258+30C>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1211+30C>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.*48+30C>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1515+30C>G
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12517
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28625
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

16-30770470-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770470
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770470
    reference: chr 16
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.727+29G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1135G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1758G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.*48+29G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2052C>G
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.258+29G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.922+29G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1528+29G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1515+29G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.879+29G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-970C>G
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1211+29G>C
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10755
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

16-30770470-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770470
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770470
    reference: chr 16
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1528+29G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1515+29G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1758G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.879+29G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.922+29G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.*48+29G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1211+29G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.727+29G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2052C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-970C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1135G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.258+29G>A
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10755
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum

16-30770474-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770474
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770474
    reference: chr 16
allele count: 24
allele frequency: 1.977261492832427e-4
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2056G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.258+25C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1211+25C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.727+25C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-966G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.*48+25C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1754C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1515+25C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.879+25C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1528+25C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1131C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.922+25C>T
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10756
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28630
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/16-30770482-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770482
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770482
    reference: chr 16
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-958C>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.879+17G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.258+17G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1123G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.727+17G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1746G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1528+17G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2064C>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.*48+17G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1211+17G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1515+17G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.922+17G>T
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12502
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

16-30770500-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770500
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770500
    reference: chr 16
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.726G>A
  hgvsp: ENST00000543610.1:c.726G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2082C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1210G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.*47G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1728G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.921G>A
  hgvsp: ENST00000541260.1:c.921G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-940C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1527G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.257G>A
  hgvsp: ENST00000535476.2:c.257G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1105G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.878G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1514G>A
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.726G>A
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

16-30770507-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770507
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770507
    reference: chr 16
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2089C>G
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1507G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1098G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.250G>C
  hgvsp: ENSP00000442644.2:p.Ser84Thr
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1203G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.871G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.914G>C
  hgvsp: ENSP00000457287.1:p.Ser305Thr
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1721G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1520G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.719G>C
  hgvsp: ENSP00000437532.1:p.Ser240Thr
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.*40G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-933C>G
  variant of: http://identifiers.org/hgnc/8931
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12489
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser240Thr
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/16-30770515-CCA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770515
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770513
    reference: chr 16
allele count: 189
allele frequency: 1.557581051902886e-3
allele num: 121342
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1510_1511delTG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1497_1498delTG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.709_710delTG
  hgvsp: ENSP00000437532.1:p.Trp237AlafsTer4
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1088_276+1089delTG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1711_1712delTG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1193_1194delTG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.240_241delTG
  hgvsp: ENSP00000442644.2:p.Trp81AlafsTer4
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.*30_*31delTG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.904_905delTG
  hgvsp: ENSP00000457287.1:p.Trp302AlafsTer4
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-922_1084-921delCA
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.861_862delTG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2100_*2101delCA
  variant of: http://identifiers.org/hgnc/8931
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.75e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 28590
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 10806
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Trp237AlafsTer4
num of homozygotes: 1
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: CCA
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-30770523-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770523
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770523
    reference: chr 16
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2105T>G
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.703A>C
  hgvsp: ENSP00000437532.1:p.Lys235Gln
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.234A>C
  hgvsp: ENSP00000442644.2:p.Lys79Gln
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-917T>G
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1504A>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.898A>C
  hgvsp: ENSP00000457287.1:p.Lys300Gln
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1491A>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1705A>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.855A>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1187A>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.*24A>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1082A>C
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys235Gln
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

16-30770529-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770529
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770529
    reference: chr 16
allele count: 1
allele frequency: 8.241169586787756e-6
allele num: 121342
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.849C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1498C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1181C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1485C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.697C>T
  hgvsp: ENSP00000437532.1:p.Pro233Ser
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1699C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2111G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.892C>T
  hgvsp: ENSP00000457287.1:p.Pro298Ser
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.228C>T
  hgvsp: ENSP00000442644.2:p.Pro77Ser
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.*18C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1076C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-911G>A
  variant of: http://identifiers.org/hgnc/8931
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12495
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28698
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro233Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-30770536-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770536
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770536
    reference: chr 16
allele count: 40
allele frequency: 3.29673952461016e-4
allele num: 121332
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1174G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1069G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1692G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.221G>A
  hgvsp: ENST00000535476.2:c.221G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1478G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-904C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.690G>A
  hgvsp: ENST00000543610.1:c.690G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1491G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.842G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.885G>A
  hgvsp: ENST00000541260.1:c.885G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2118C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.*11G>A
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10862
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28701
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3430
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 9.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
hgvs: p.Gly230Gly
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/16-30770537-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770537
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770537
    reference: chr 16
allele count: 1
allele frequency: 8.241848811525402e-6
allele num: 121332
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.220G>T
  hgvsp: ENSP00000442644.2:p.Gly74Val
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-903C>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.*10G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2119C>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.841G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1490G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1173G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.884G>T
  hgvsp: ENSP00000457287.1:p.Gly295Val
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.689G>T
  hgvsp: ENSP00000437532.1:p.Gly230Val
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1691G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1477G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1068G>T
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28714
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly230Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

16-30770541-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770541
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770541
    reference: chr 16
allele count: 48
allele frequency: 3.956413511152141e-4
allele num: 121322
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1687A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.216A>G
  hgvsp: ENSP00000442644.2:p.Met73Val
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.880A>G
  hgvsp: ENSP00000457287.1:p.Met294Val
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2123T>C
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.*6A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.685A>G
  hgvsp: ENSP00000437532.1:p.Met229Val
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.837A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1473A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-899T>C
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1064A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1169A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1486A>G
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12474
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Met229Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

16-30770541-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770541
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770540
    reference: chr 16
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1168delC
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.*5delC
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1485delC
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1472delC
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.836delC
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.684delC
  hgvsp: ENSP00000437532.1:p.Tyr228Ter
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-898delG
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2124delG
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1063delC
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.879delC
  hgvsp: ENSP00000457287.1:p.Tyr293Ter
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.215delC
  hgvsp: ENSP00000442644.2:p.Tyr72Ter
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1686delC
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr228Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: TG
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

16-30770547-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770547
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770547
    reference: chr 16
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-893T>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.210A>T
  hgvsp: ENSP00000442644.2:p.Thr71Ser
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1163A>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2129T>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1467A>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.831A>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.679A>T
  hgvsp: ENSP00000437532.1:p.Thr227Ser
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1058A>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.874A>T
  hgvsp: ENSP00000457287.1:p.Thr292Ser
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.275A>T
  hgvsp: ENSP00000455034.1:p.Ter92CysextTer30
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1681A>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1480A>T
  variant of: http://identifiers.org/hgnc/28078
canonical: false
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28725
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12480
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ter92CysextTer30
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

16-30770564-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770564
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770564
    reference: chr 16
allele count: 13
allele frequency: 1.071864384420039e-4
allele num: 121284
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.662G>A
  hgvsp: ENSP00000437532.1:p.Arg221Gln
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.857G>A
  hgvsp: ENSP00000457287.1:p.Arg286Gln
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.258G>A
  hgvsp: ENSP00000455034.1:p.Gly87Ser
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1041G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.814G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2146C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.193G>A
  hgvsp: ENSP00000442644.2:p.Arg65Gln
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1664G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1146G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-876C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1463G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1450G>A
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12444
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28737
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg221Gln
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

16-30770565-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770565
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770565
    reference: chr 16
allele count: 4
allele frequency: 3.297989875171083e-5
allele num: 121286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-875G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2147G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.813C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.661C>T
  hgvsp: ENSP00000437532.1:p.Arg221Trp
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1040C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.192C>T
  hgvsp: ENSP00000442644.2:p.Arg65Trp
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.856C>T
  hgvsp: ENSP00000457287.1:p.Arg286Trp
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1145C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.257C>T
  hgvsp: ENST00000544613.1:c.257C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1663C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1449C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1462C>T
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10831
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1732
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28741
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg221Trp
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

16-30770576-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770576
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770576
    reference: chr 16
allele count: 5
allele frequency: 4.123439278233189e-5
allele num: 121258
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1660-8C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2158G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1142-8C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1459-8C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1029C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.254-8C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.853-8C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.658-8C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-864G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.810-8C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.189-8C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1446-8C>T
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28696
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.658-8C>T
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

16-30770583-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770583
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770583
    reference: chr 16
allele count: 4
allele frequency: 3.29918675046601e-5
allele num: 121242
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1459-15T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.658-15T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.189-15T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.254-15T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1660-15T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1446-15T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.810-15T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-857A>G
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1142-15T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.853-15T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2165A>G
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1022T>C
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28702
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-30770585-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770585
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770585
    reference: chr 16
allele count: 1
allele frequency: 8.249191579225235e-6
allele num: 121224
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.658-17T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1142-17T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1459-17T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2167A>C
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.254-17T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.853-17T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1020T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-855A>C
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1446-17T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.189-17T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1660-17T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.810-17T>G
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12417
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

16-30770586-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770586
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770586
    reference: chr 16
allele count: 1
allele frequency: 8.248239000973292e-6
allele num: 121238
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1660-18C>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1142-18C>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1459-18C>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1019C>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.853-18C>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2168G>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.189-18C>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1446-18C>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.658-18C>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-854G>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.254-18C>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.810-18C>A
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12413
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

16-30770593-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770593
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770593
    reference: chr 16
allele count: 1
allele frequency: 8.248919391559706e-6
allele num: 121228
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1459-25A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.853-25A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1446-25A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.254-25A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1012A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2175T>C
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-847T>C
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1660-25A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.189-25A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.658-25A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.810-25A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1142-25A>G
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12376
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10558
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

16-30770602-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770602
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770602
    reference: chr 16
allele count: 11
allele frequency: 9.076806284450606e-5
allele num: 121188
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-838T>C
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+1003A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.189-34A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1459-34A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1142-34A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.853-34A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.658-34A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2184T>C
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.254-34A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1660-34A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.810-34A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1446-34A>G
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12357
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28506
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

16-30770606-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770606
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770606
    reference: chr 16
allele count: 8
allele frequency: 6.602839220864973e-5
allele num: 121160
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2188C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1142-38G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1459-38G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1660-38G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.853-38G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.658-38G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.254-38G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+999G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-834C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.189-38G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1446-38G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.810-38G>A
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28500
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10329
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

16-30770617-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770617
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770617
    reference: chr 16
allele count: 5
allele frequency: 4.12847824291966e-5
allele num: 121110
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1445+46C>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2199G>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+988C>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.188+46C>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.253+46C>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1659+46C>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.809+46C>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.852+46C>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1458+46C>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-823G>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1141+46C>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.657+46C>A
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28310
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10132
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12330
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

16-30770618-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770618
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770618
    reference: chr 16
allele count: 1
allele frequency: 8.257365570088519e-6
allele num: 121104
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.657+45C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2200G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1659+45C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.188+45C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.253+45C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-822G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.809+45C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1141+45C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1445+45C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1458+45C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.852+45C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+987C>T
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28328
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

16-30770624-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770624
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770624
    reference: chr 16
allele count: 1
allele frequency: 8.259820927082301e-6
allele num: 121068
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.253+39C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1659+39C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+981C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1141+39C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.809+39C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.657+39C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1445+39C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1458+39C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.852+39C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-816G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2206G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.188+39C>T
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10139
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3391
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

16-30770625-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770625
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770625
    reference: chr 16
allele count: 2
allele frequency: 1.652537471287161e-5
allele num: 121026
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.809+38G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.188+38G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1659+38G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.852+38G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2207C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1445+38G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.657+38G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-815C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.253+38G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1458+38G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+980G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1141+38G>A
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10125
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12305
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3391
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS

16-30770630-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770630
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770630
    reference: chr 16
allele count: 1
allele frequency: 8.258593066085262e-6
allele num: 121086
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.809+33C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.253+33C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2212G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+975C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1659+33C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1458+33C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-810G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1141+33C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.852+33C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.188+33C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.657+33C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1445+33C>T
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3367
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10283
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

16-30770631-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770631
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770631
    reference: chr 16
allele count: 1
allele frequency: 8.258729477057249e-6
allele num: 121084
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1458+32T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+974T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-809A>G
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1659+32T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.253+32T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2213A>G
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1141+32T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1445+32T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.852+32T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.657+32T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.809+32T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.188+32T>C
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3367
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28241
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12257
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP

16-30770633-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770633
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770633
    reference: chr 16
allele count: 2
allele frequency: 1.651664051531918e-5
allele num: 121090
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.253+30C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2215G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1659+30C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1458+30C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.852+30C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1141+30C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1445+30C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.809+30C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-807G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.657+30C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+972C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.188+30C>T
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10318
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12254
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28249
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3372
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

16-30770637-GCTC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770637
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770634
    reference: chr 16
allele count: 1
allele frequency: 8.257911078813503e-6
allele num: 121096
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1659+23_1659+25delGAG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1458+23_1458+25delGAG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.852+23_852+25delGAG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+965_276+967delGAG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.809+23_809+25delGAG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2223_*2225delCTC
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1445+23_1445+25delGAG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.253+23_253+25delGAG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-799_1084-797delCTC
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1141+23_1141+25delGAG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.657+23_657+25delGAG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.188+23_188+25delGAG
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12257
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3366
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: GCTC
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

16-30770646-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770646
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770646
    reference: chr 16
allele count: 1
allele frequency: 8.255456856982466e-6
allele num: 121132
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-794G>C
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.188+17C>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.253+17C>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1458+17C>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1445+17C>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1141+17C>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2228G>C
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.657+17C>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.809+17C>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+959C>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.852+17C>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1659+17C>G
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3359
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10555
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/16-30770654-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770654
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770653
    reference: chr 16
allele count: 1
allele frequency: 8.255729476256522e-6
allele num: 121128
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.188+8delG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1458+8delG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-781delC
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.657+8delG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.253+8delG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2241delC
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1141+8delG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.809+8delG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1659+8delG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1445+8delG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.852+8delG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+950delG
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10584
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3362
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28424
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.657+8delG
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
reference allele: AC
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/16-30770655-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770655
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770655
    reference: chr 16
allele count: 1
allele frequency: 8.257501940512956e-6
allele num: 121102
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.188+8G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1659+8G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.253+8G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-785C>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.809+8G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1445+8G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.852+8G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1458+8G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+950G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1141+8G>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2237C>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.657+8G>T
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12297
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3365
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10573
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.657+8G>T
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-30770658-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770658
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770658
    reference: chr 16
allele count: 1
allele frequency: 8.252459232851389e-6
allele num: 121176
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-782C>G
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1445+5G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+947G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.253+5G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.657+5G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.852+5G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1141+5G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2240C>G
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.809+5G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1458+5G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1659+5G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.188+5G>C
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10621
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3363
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.657+5G>C
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff

16-30770658-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770658
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770658
    reference: chr 16
allele count: 2
allele frequency: 1.650491846570278e-5
allele num: 121176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1141+5G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2240C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.253+5G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.852+5G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+947G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1445+5G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.809+5G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1458+5G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1659+5G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-782C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.188+5G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.657+5G>A
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10621
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.657+5G>A
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/16-30770661-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770661
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770661
    reference: chr 16
allele count: 2
allele frequency: 1.650410126916539e-5
allele num: 121182
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1659+2T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.657+2T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1458+2T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.253+2T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.809+2T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.188+2T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2243A>C
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1445+2T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+944T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1141+2T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.852+2T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-779A>C
  variant of: http://identifiers.org/hgnc/8931
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3368
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.657+2T>G
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

16-30770672-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770672
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770672
    reference: chr 16
allele count: 1
allele frequency: 8.246470510621453e-6
allele num: 121264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.244C>T
  hgvsp: ENSP00000455034.1:p.Ser82Leu
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+933C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1650C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.179C>T
  hgvsp: ENST00000535476.2:c.179C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-768G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1436C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.843C>T
  hgvsp: ENST00000541260.1:c.843C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.800C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2254G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1449C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.648C>T
  hgvsp: ENST00000543610.1:c.648C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1132C>T
  variant of: http://identifiers.org/hgnc/28078
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12347
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3365
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser82Leu
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

16-30770677-C-CCG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770677
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770679
    reference: chr 16
allele count: 1
allele frequency: 8.244838730954422e-6
allele num: 121288
alternate allele: CCG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1430_1431insCG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.837_838insCG
  hgvsp: ENSP00000457287.1:p.Val280ArgfsTer13
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1126_1127insCG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2259_*2260insCG
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-763_1084-762insCG
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1443_1444insCG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.173_174insCG
  hgvsp: ENSP00000442644.2:p.Val59ArgfsTer13
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.794_795insCG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.642_643insCG
  hgvsp: ENSP00000437532.1:p.Val215ArgfsTer13
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.238_239insCG
  hgvsp: ENSP00000455034.1:p.Ser81GlyfsTer27
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+927_276+928insCG
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1644_1645insCG
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3366
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12377
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10965
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val215ArgfsTer13
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

16-30770677-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770677
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770677
    reference: chr 16
allele count: 9
allele frequency: 7.42035485785898e-5
allele num: 121288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1431G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.239G>A
  hgvsp: ENST00000544613.1:c.239G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1127G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1645G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1444G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.643G>A
  hgvsp: ENSP00000437532.1:p.Val215Ile
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-763C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.795G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.174G>A
  hgvsp: ENSP00000442644.2:p.Val59Ile
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.838G>A
  hgvsp: ENSP00000457287.1:p.Val280Ile
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+928G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2259C>T
  variant of: http://identifiers.org/hgnc/8931
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28812
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3366
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10965
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12377
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val215Ile
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum

16-30770678-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770678
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770678
    reference: chr 16
allele count: 1
allele frequency: 8.244023083264634e-6
allele num: 121300
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.837C>T
  hgvsp: ENST00000541260.1:c.837C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.642C>T
  hgvsp: ENST00000543610.1:c.642C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1126C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.794C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1430C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.238C>T
  hgvsp: ENSP00000455034.1:p.Thr80Met
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2260G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.173C>T
  hgvsp: ENST00000535476.2:c.173C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-762G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1443C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1644C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+927C>T
  variant of: http://identifiers.org/hgnc/28078
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3359
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10991
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr80Met
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-30770678-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770678
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770679
    reference: chr 16
allele count: 1
allele frequency: 8.244023083264634e-6
allele num: 121300
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.237dupA
  hgvsp: ENSP00000455034.1:p.Thr80AsnfsTer89
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.641dupA
  hgvsp: ENSP00000437532.1:p.Tyr214Ter
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1442dupA
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2261dupT
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1643dupA
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.793dupA
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1429dupA
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.836dupA
  hgvsp: ENSP00000457287.1:p.Tyr279Ter
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1125dupA
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.172dupA
  hgvsp: ENSP00000442644.2:p.Tyr58Ter
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+926dupA
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-761dupT
  variant of: http://identifiers.org/hgnc/8931
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3359
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10991
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr214Ter
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

16-30770684-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770684
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770684
    reference: chr 16
allele count: 1
allele frequency: 8.24279991427488e-6
allele num: 121318
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.831T>C
  hgvsp: ENST00000541260.1:c.831T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.788T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.636T>C
  hgvsp: ENST00000543610.1:c.636T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-756A>G
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1437T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1120T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1424T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.232T>C
  hgvsp: ENSP00000455034.1:p.Ile78Thr
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1638T>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.167T>C
  hgvsp: ENST00000535476.2:c.167T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2266A>G
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+921T>C
  variant of: http://identifiers.org/hgnc/28078
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28865
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11052
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile78Thr
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

16-30770685-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770685
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770685
    reference: chr 16
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1637A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.787A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-755T>C
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.231A>G
  hgvsp: ENSP00000455034.1:p.Ile78Val
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.166A>G
  hgvsp: ENSP00000442644.2:p.Tyr56Cys
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.635A>G
  hgvsp: ENSP00000437532.1:p.Tyr212Cys
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1423A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1436A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.830A>G
  hgvsp: ENSP00000457287.1:p.Tyr277Cys
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1119A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+920A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2267T>C
  variant of: http://identifiers.org/hgnc/8931
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12376
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11066
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr212Cys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ

16-30770689-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770689
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770689
    reference: chr 16
allele count: 1
allele frequency: 8.241577108195424e-6
allele num: 121336
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+916C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.227C>T
  hgvsp: ENST00000544613.1:c.227C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2271G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.826C>T
  hgvsp: ENSP00000457287.1:p.Leu276Phe
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.631C>T
  hgvsp: ENSP00000437532.1:p.Leu211Phe
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.162C>T
  hgvsp: ENSP00000442644.2:p.Leu55Phe
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1432C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1419C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.783C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1115C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1633C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-751G>A
  variant of: http://identifiers.org/hgnc/8931
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28901
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12383
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu211Phe
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/16-30770695-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770695
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770695
    reference: chr 16
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1426T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1109T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.625T>G
  hgvsp: ENSP00000437532.1:p.Phe209Val
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+910T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.777T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1413T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.820T>G
  hgvsp: ENSP00000457287.1:p.Phe274Val
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.156T>G
  hgvsp: ENSP00000442644.2:p.Phe53Val
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1627T>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-745A>C
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.221T>G
  hgvsp: ENST00000544613.1:c.221T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2277A>C
  variant of: http://identifiers.org/hgnc/8931
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12388
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28955
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe209Val
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

16-30770700-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770700
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770700
    reference: chr 16
allele count: 2
allele frequency: 1.648098094798602e-5
allele num: 121352
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.620G>A
  hgvsp: ENSP00000437532.1:p.Arg207His
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.151G>A
  hgvsp: ENSP00000442644.2:p.Arg51His
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-740C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1104G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1622G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+905G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1421G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.772G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2282C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1408G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.216G>A
  hgvsp: ENSP00000455034.1:p.Ala73Thr
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.815G>A
  hgvsp: ENSP00000457287.1:p.Arg272His
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28983
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12394
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg207His
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

16-30770705-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770705
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770705
    reference: chr 16
allele count: 2
allele frequency: 1.647826516824309e-5
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.146C>T
  hgvsp: ENST00000535476.2:c.146C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.211C>T
  hgvsp: ENSP00000455034.1:p.Thr71Ile
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1617C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.615C>T
  hgvsp: ENST00000543610.1:c.615C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1403C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.810C>T
  hgvsp: ENST00000541260.1:c.810C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-735G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1099C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2287G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+900C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1416C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.767C>T
  variant of: http://identifiers.org/hgnc/28078
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11100
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29003
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr71Ile
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

16-30770705-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770705
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770706
    reference: chr 16
allele count: 3
allele frequency: 2.471739775236463e-5
allele num: 121372
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.210dupA
  hgvsp: ENSP00000455034.1:p.Thr71AsnfsTer98
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1616dupA
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.614dupA
  hgvsp: ENSP00000437532.1:p.Tyr205Ter
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1415dupA
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.766dupA
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2288dupT
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1098dupA
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1402dupA
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.809dupA
  hgvsp: ENSP00000457287.1:p.Tyr270Ter
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.145dupA
  hgvsp: ENSP00000442644.2:p.Tyr49Ter
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+899dupA
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-734dupT
  variant of: http://identifiers.org/hgnc/8931
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11100
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29003
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr205Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

16-30770710-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770710
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770710
    reference: chr 16
allele count: 9
allele frequency: 7.41521932570939e-5
allele num: 121372
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+895A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1411A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.762A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1094A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2292T>C
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.206A>G
  hgvsp: ENST00000544613.1:c.206A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.610A>G
  hgvsp: ENSP00000437532.1:p.Thr204Ala
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.805A>G
  hgvsp: ENSP00000457287.1:p.Thr269Ala
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.141A>G
  hgvsp: ENSP00000442644.2:p.Thr48Ala
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-730T>C
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1398A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1612A>G
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 29025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Thr204Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

16-30770719-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770719
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770719
    reference: chr 16
allele count: 43
allele frequency: 3.542418400804046e-4
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.132G>A
  hgvsp: ENSP00000442644.2:p.Val45Met
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-721C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1085G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.601G>A
  hgvsp: ENSP00000437532.1:p.Val201Met
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.197G>A
  hgvsp: ENST00000544613.1:c.197G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2301C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1402G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.796G>A
  hgvsp: ENSP00000457287.1:p.Val266Met
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1603G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.753G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+886G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1389G>A
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 29051
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12388
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11117
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 6.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
hgvs: p.Val201Met
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

16-30770731-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770731
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770731
    reference: chr 16
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.120T>A
  hgvsp: ENSP00000442644.2:p.Leu41Met
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2313A>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1377T>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.741T>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1390T>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.589T>A
  hgvsp: ENSP00000437532.1:p.Leu197Met
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+874T>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.185T>A
  hgvsp: ENST00000544613.1:c.185T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1073T>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1591T>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.784T>A
  hgvsp: ENSP00000457287.1:p.Leu262Met
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-709A>T
  variant of: http://identifiers.org/hgnc/8931
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu197Met
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

16-30770735-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770735
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770735
    reference: chr 16
allele count: 5
allele frequency: 4.11868399808893e-5
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1373G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.181G>A
  hgvsp: ENSP00000455034.1:p.Trp61Ter
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+870G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.585G>A
  hgvsp: ENST00000543610.1:c.585G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2317C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-705C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1587G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.116G>A
  hgvsp: ENST00000535476.2:c.116G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1069G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.737G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.780G>A
  hgvsp: ENST00000541260.1:c.780G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1386G>A
  variant of: http://identifiers.org/hgnc/28078
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3335
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29121
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12385
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp61Ter
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

16-30770737-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770737
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770737
    reference: chr 16
allele count: 35
allele frequency: 2.883078798662251e-4
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2319G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1585C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+868C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.583C>T
  hgvsp: ENST00000543610.1:c.583C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-703G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.735C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.179C>T
  hgvsp: ENST00000544613.1:c.179C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.778C>T
  hgvsp: ENST00000541260.1:c.778C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1067C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.114C>T
  hgvsp: ENST00000535476.2:c.114C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1371C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1384C>T
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12383
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Leu195Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

16-30770740-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770740
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770740
    reference: chr 16
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+865C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.775C>T
  hgvsp: ENST00000541260.1:c.775C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.732C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.111C>T
  hgvsp: ENST00000535476.2:c.111C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.176C>T
  hgvsp: ENST00000544613.1:c.176C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.580C>T
  hgvsp: ENST00000543610.1:c.580C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2322G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1582C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-700G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1381C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1064C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1368C>T
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29147
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3335
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11151
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu194Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

16-30770741-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770741
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770741
    reference: chr 16
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.175G>C
  hgvsp: ENSP00000455034.1:p.Ser59Thr
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.110G>C
  hgvsp: ENSP00000442644.2:p.Gln37His
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.579G>C
  hgvsp: ENSP00000437532.1:p.Gln193His
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2323C>G
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.731G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.774G>C
  hgvsp: ENSP00000457287.1:p.Gln258His
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-699C>G
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1367G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1581G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1063G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1380G>C
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+864G>C
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29145
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln193His
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

16-30770750-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770750
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770750
    reference: chr 16
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.166A>G
  hgvsp: ENSP00000455034.1:p.Lys56Arg
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1371A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-690T>C
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.570A>G
  hgvsp: ENST00000543610.1:c.570A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.101A>G
  hgvsp: ENST00000535476.2:c.101A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1358A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1054A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.765A>G
  hgvsp: ENST00000541260.1:c.765A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+855A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.722A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2332T>C
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1572A>G
  variant of: http://identifiers.org/hgnc/28078
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys56Arg
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD

16-30770752-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770752
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770752
    reference: chr 16
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.99A>G
  hgvsp: ENSP00000442644.2:p.Lys34Glu
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.763A>G
  hgvsp: ENSP00000457287.1:p.Lys255Glu
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.164A>G
  hgvsp: ENST00000544613.1:c.164A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.568A>G
  hgvsp: ENSP00000437532.1:p.Lys190Glu
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1052A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1356A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.720A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2334T>C
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1369A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+853A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1570A>G
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-688T>C
  variant of: http://identifiers.org/hgnc/8931
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys190Glu
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ

16-30770759-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770759
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770759
    reference: chr 16
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.756C>T
  hgvsp: ENST00000541260.1:c.756C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1045C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2341G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.92C>T
  hgvsp: ENST00000535476.2:c.92C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-681G>A
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.713C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1349C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.157C>T
  hgvsp: ENSP00000455034.1:p.Thr53Ile
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.561C>T
  hgvsp: ENST00000543610.1:c.561C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1563C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+846C>T
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1362C>T
  variant of: http://identifiers.org/hgnc/28078
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11174
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr53Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

16-30770761-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30770761
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 30770761
    reference: chr 16
allele count: 5
allele frequency: 4.118819711023609e-5
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000437532
  ensembl transcript: ENST00000543610
  gene symbol: C16orf93
  hgvsc: ENST00000543610.1:c.559G>A
  hgvsp: ENSP00000437532.1:p.Asp187Asn
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000457287
  ensembl transcript: ENST00000541260
  gene symbol: C16orf93
  hgvsc: ENST00000541260.1:c.754G>A
  hgvsp: ENSP00000457287.1:p.Asp252Asn
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000546006
  gene symbol: C16orf93
  hgvsc: ENST00000546006.1:n.1043G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000433909
  gene symbol: C16orf93
  hgvsc: ENST00000433909.2:n.711G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000388571
  ensembl transcript: ENST00000424889
  gene symbol: PHKG2
  hgvsc: ENST00000424889.3:c.1084-679C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000156873
  ensembl protein: ENSP00000455607
  ensembl transcript: ENST00000563588
  gene symbol: PHKG2
  hgvsc: ENST00000563588.1:c.*2343C>T
  variant of: http://identifiers.org/hgnc/8931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000442644
  ensembl transcript: ENST00000535476
  gene symbol: C16orf93
  hgvsc: ENST00000535476.2:c.90G>A
  hgvsp: ENSP00000442644.2:p.Asp31Asn
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544487
  gene symbol: C16orf93
  hgvsc: ENST00000544487.1:n.1561G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000543128
  gene symbol: C16orf93
  hgvsc: ENST00000543128.1:n.1347G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196118
  ensembl protein: ENSP00000455034
  ensembl transcript: ENST00000544613
  gene symbol: C16orf93
  hgvsc: ENST00000544613.1:c.155G>A
  hgvsp: ENST00000544613.1:c.155G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000537986
  gene symbol: C16orf93
  hgvsc: ENST00000537986.1:n.276+844G>A
  variant of: http://identifiers.org/hgnc/28078
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196118
  ensembl transcript: ENST00000544643
  gene symbol: C16orf93
  hgvsc: ENST00000544643.1:n.1360G>A
  variant of: http://identifiers.org/hgnc/28078
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11174
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12387
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp187Asn
num of homozygotes: 0
reference allele: C

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36645
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1704
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 999
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3026
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4634
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 29
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9624
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3111
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.622786759045419e-5
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

DP
type: SiteQuality
SIO_000300: 1.82885e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.459e0

VQSLOD
type: SiteQuality
SIO_000300: -7.340000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.664e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.158e0

MQRankSum
type: SiteQuality
SIO_000300: 1.89e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.604e0

GenotypeDepth
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36648
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 999
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4630
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9627
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3112
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3027
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997871511227029e-5
allele num: 66714
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.559e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.709e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.084e0

MQRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

DP
type: SiteQuality
SIO_000300: 1.828698e6

GenotypeDepth
all individuals: 278
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4627
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3027
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9627
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3112
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36658
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1704
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.362e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

FS
type: SiteQuality
SIO_000300: 6.4e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

VQSLOD
type: SiteQuality
SIO_000300: -1.426e0

MQRankSum
type: SiteQuality
SIO_000300: 2.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.828421e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.88e-1

QD
type: SiteQuality
SIO_000300: 1.529e1

GenotypeDepth
all individuals: 377
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36722
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4627
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3024
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3119
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1704
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9626
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.459e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.11e-1

FS
type: SiteQuality
SIO_000300: 5.731e0

VQSLOD
type: SiteQuality
SIO_000300: -6.693e-1

DP
type: SiteQuality
SIO_000300: 1.828425e6

MQRankSum
type: SiteQuality
SIO_000300: -3.836e0

QD
type: SiteQuality
SIO_000300: 2.498e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.106e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeDepth
all individuals: 953
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4623
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3117
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9628
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1704
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36705
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3022
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.66e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

DP
type: SiteQuality
SIO_000300: 1.828115e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.742e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.13e-1

GenotypeDepth
all individuals: 12515
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36725
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9625
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3117
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4622
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3022
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.321e-1

FS
type: SiteQuality
SIO_000300: 4.159e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.828086e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.38e-1

QD
type: SiteQuality
SIO_000300: 1.238e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.191e0

GenotypeDepth
all individuals: 64
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3116
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9621
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36688
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3020
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4620
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

MQRankSum
type: SiteQuality
SIO_000300: -1.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.12e-1

FS
type: SiteQuality
SIO_000300: 2.114e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.827891e6

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.23e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-1

GenotypeDepth
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36693
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9624
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3116
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3019
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4621
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.56e-1

FS
type: SiteQuality
SIO_000300: 1.451e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.36e-1

DP
type: SiteQuality
SIO_000300: 1.827735e6

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.979e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.04e-1

QD
type: SiteQuality
SIO_000300: 1.757e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e-1

GenotypeDepth
all individuals: 187
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36693
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3019
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3116
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4621
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9624
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.451e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.04e-1

QD
type: SiteQuality
SIO_000300: 1.757e1

DP
type: SiteQuality
SIO_000300: 1.827735e6

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.56e-1

GenotypeDepth
all individuals: 64
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4619
bin: 9.75e1
variant carriers: 24

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9624
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1702
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36700
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3110
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3020
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.622786759045419e-5
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.535833081342606e-4
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 2.997422216893471e-4
allele num: 66724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.4e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.91e0

MQ
type: SiteQuality
SIO_000300: 5.986e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.328e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.28e-1

QD
type: SiteQuality
SIO_000300: 1.409e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.827964e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

GenotypeDepth
all individuals: 192
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36710
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4601
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9622
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3111
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3020
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.351e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.575e0

VQSLOD
type: SiteQuality
SIO_000300: 6.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.437e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e0

DP
type: SiteQuality
SIO_000300: 1.826106e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

GenotypeDepth
all individuals: 110
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 62
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3443
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 76
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36704
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4585
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9602
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1700
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3102
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 990
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3020
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.965e1

DP
type: SiteQuality
SIO_000300: 1.824307e6

VQSLOD
type: SiteQuality
SIO_000300: -1.908e0

QD
type: SiteQuality
SIO_000300: 1.235e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.01e0

FS
type: SiteQuality
SIO_000300: 1.1738e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.58e0

GenotypeDepth
all individuals: 76
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 192
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 83
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36694
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3104
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 989
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4583
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 772
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3016
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1700
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9609
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.823683e6

FS
type: SiteQuality
SIO_000300: 2.688e0

QD
type: SiteQuality
SIO_000300: 1.469e1

VQSLOD
type: SiteQuality
SIO_000300: 7.63e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

GenotypeDepth
all individuals: 945
bin: 4.75e1
variant carriers: 3

GenotypeDepth
all individuals: 455
bin: 5.75e1
variant carriers: 7

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36692
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3096
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9603
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1695
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3009
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4617
bin: 9.75e1
variant carriers: 188

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 182
allele frequency: 2.104532839962997e-2
allele num: 8648
num of homozygotes: 1

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422480620155039e-4
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92492781520693e-4
allele num: 10390
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.45e0

MQRankSum
type: SiteQuality
SIO_000300: 6.02e-1

QD
type: SiteQuality
SIO_000300: 1.793e1

FS
type: SiteQuality
SIO_000300: 1.102e0

MQ
type: SiteQuality
SIO_000300: 5.994e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.23e-2

DP
type: SiteQuality
SIO_000300: 1.826519e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e-1

GenotypeDepth
all individuals: 10837
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 28699
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3016
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1695
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3102
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36807
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4437
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 986
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9619
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e0

VQSLOD
type: SiteQuality
SIO_000300: 8.48e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.29e-1

FS
type: SiteQuality
SIO_000300: 4.224e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.98e0

QD
type: SiteQuality
SIO_000300: 1.136e1

DP
type: SiteQuality
SIO_000300: 1.813382e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.45e-1

MQ
type: SiteQuality
SIO_000300: 6.012e1

GenotypeDepth
all individuals: 1753
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 262
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3102
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3015
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1695
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 986
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4430
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36830
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9613
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.834e1

QD
type: SiteQuality
SIO_000300: 1.268e1

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.533e0

DP
type: SiteQuality
SIO_000300: 1.813152e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.314e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.061e0

GenotypeDepth
all individuals: 619
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 97
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 3013
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36860
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1691
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3097
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9595
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4437
bin: 9.75e1
variant carriers: 40

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 38
allele frequency: 3.659476117103236e-3
allele num: 10384
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.813094e6

FS
type: SiteQuality
SIO_000300: 5.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.961e1

VQSLOD
type: SiteQuality
SIO_000300: 3.56e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.585e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.34e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-2

QD
type: SiteQuality
SIO_000300: 1.244e1

GenotypeDepth
all individuals: 1750
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 260
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9602
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4400
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 765
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3015
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36882
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1691
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3098
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.19e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

QD
type: SiteQuality
SIO_000300: 1.143e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.503e0

MQRankSum
type: SiteQuality
SIO_000300: 3.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.810652e6

GenotypeDepth
all individuals: 65
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 99
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 9596
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1688
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3097
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4403
bin: 9.75e1
variant carriers: 48

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36871
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3007
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 47
allele frequency: 7.048590281943611e-4
allele num: 66680
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.632055480639569e-5
allele num: 10382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.12e0

MQRankSum
type: SiteQuality
SIO_000300: 3.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.966e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.378e1

DP
type: SiteQuality
SIO_000300: 1.811562e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.1e-2

GenotypeDepth
all individuals: 12474
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 99
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9596
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3007
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3097
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4403
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 36871
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1688
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66680
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.29e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.811562e6

VQSLOD
type: SiteQuality
SIO_000300: 5.12e0

MQRankSum
type: SiteQuality
SIO_000300: 3.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -6.1e-2

QD
type: SiteQuality
SIO_000300: 1.378e1

MQ
type: SiteQuality
SIO_000300: 5.966e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.95e-1

GenotypeDepth
all individuals: 930
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 143
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1688
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36868
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9600
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4357
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3010
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3097
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499835018148004e-5
allele num: 66674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.31e-1

DP
type: SiteQuality
SIO_000300: 1.807506e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.08e-1

QD
type: SiteQuality
SIO_000300: 1.182e1

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-2

FS
type: SiteQuality
SIO_000300: 1.597e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.142e0

MQ
type: SiteQuality
SIO_000300: 5.927e1

VQSLOD
type: SiteQuality
SIO_000300: 7.57e-1

GenotypeDepth
all individuals: 435
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 125
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 165
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1681
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36766
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4344
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 9540
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2989
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3080
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.80055817303364e-4
allele num: 66646
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.985e1

QD
type: SiteQuality
SIO_000300: 1.27e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.65e0

DP
type: SiteQuality
SIO_000300: 1.804893e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.6e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

FS
type: SiteQuality
SIO_000300: 2.458e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.08e0

GenotypeDepth
all individuals: 117
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 616
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4332
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3076
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9547
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2991
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1682
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36785
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.500855162480871e-5
allele num: 66654
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.09e-1

DP
type: SiteQuality
SIO_000300: 1.803812e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.79e-1

QD
type: SiteQuality
SIO_000300: 1.156e1

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

FS
type: SiteQuality
SIO_000300: 5.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.38e-1

GenotypeDepth
all individuals: 254
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 158
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36619
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4327
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 61
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2979
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1678
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9529
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3064
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.777675063554426e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 2.425e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.085e0

DP
type: SiteQuality
SIO_000300: 1.801928e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

MQRankSum
type: SiteQuality
SIO_000300: -1.63e-1

QD
type: SiteQuality
SIO_000300: 1.229e1

GenotypeDepth
all individuals: 10644
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1675
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9478
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36612
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2977
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4322
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 280
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3050
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 979
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.003842459173871e-5
allele num: 66624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.255e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.381e0

DP
type: SiteQuality
SIO_000300: 1.800563e6

MQRankSum
type: SiteQuality
SIO_000300: 4.55e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

VQSLOD
type: SiteQuality
SIO_000300: 3.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.101e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.25e-1

GenotypeDepth
all individuals: 45
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2979
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3051
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 979
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1673
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9446
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4317
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36501
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501185936890143e-5
allele num: 66614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.799477e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.536e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.189e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.65e-1

QD
type: SiteQuality
SIO_000300: 1.392e1

GenotypeDepth
all individuals: 66
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1674
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2978
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 979
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9449
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4316
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 141
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3052
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36547
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501005673801447e-5
allele num: 66622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.85e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

FS
type: SiteQuality
SIO_000300: 7.851e0

MQRankSum
type: SiteQuality
SIO_000300: -4.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.719e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.799371e6

QD
type: SiteQuality
SIO_000300: 1.102e1

GenotypeDepth
all individuals: 28591
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9426
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36240
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3044
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1674
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4314
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2970
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.069434328720563e-5
allele num: 16476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66618
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 1.79727e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

MQRankSum
type: SiteQuality
SIO_000300: -1.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.369e0

QD
type: SiteQuality
SIO_000300: 1.23e1

GenotypeDepth
all individuals: 626
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35934
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2953
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9382
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1674
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4318
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 3040
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 9.626492106276473e-4
allele num: 10388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66600
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.09e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

MQRankSum
type: SiteQuality
SIO_000300: 1.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.212e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.74e-1

DP
type: SiteQuality
SIO_000300: 1.795224e6

GenotypeDepth
all individuals: 156
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9358
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1673
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2952
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35922
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3025
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4306
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 143
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.86677211339579e-4
allele num: 16438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.92e-1

DP
type: SiteQuality
SIO_000300: 1.79412e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.606e0

VQSLOD
type: SiteQuality
SIO_000300: 8.54e-1

FS
type: SiteQuality
SIO_000300: 4.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.73e-1

QD
type: SiteQuality
SIO_000300: 1.269e1

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeDepth
all individuals: 915
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1670
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9296
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3009
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35467
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4298
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2941
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.041362530413625e-4
allele num: 16440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66556
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.790084e6

FS
type: SiteQuality
SIO_000300: 2.157e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.946e0

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.91e-1

QD
type: SiteQuality
SIO_000300: 1.339e1

MQ
type: SiteQuality
SIO_000300: 5.956e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

GenotypeDepth
all individuals: 434
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4293
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3001
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1666
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9289
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35529
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2941
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502494140272853e-5
allele num: 66556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.081e1

MQ
type: SiteQuality
SIO_000300: 5.94e1

VQSLOD
type: SiteQuality
SIO_000300: 5.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.49e-1

FS
type: SiteQuality
SIO_000300: 4.304e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.86e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

DP
type: SiteQuality
SIO_000300: 1.789969e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.239e0

GenotypeDepth
all individuals: 920
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9252
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1665
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35265
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2926
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2989
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4292
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 754
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.091617933723197e-5
allele num: 16416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.788761e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.57e-1

FS
type: SiteQuality
SIO_000300: 8.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.182e0

QD
type: SiteQuality
SIO_000300: 1.193e1

VQSLOD
type: SiteQuality
SIO_000300: -7.317e-1

MQ
type: SiteQuality
SIO_000300: 5.881e1

GenotypeDepth
all individuals: 65
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2982
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4292
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 979
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2912
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9230
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1663
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35305
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.1020258725897e-5
allele num: 16388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503081316699233e-5
allele num: 66530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.43e-1

DP
type: SiteQuality
SIO_000300: 1.788843e6

MQRankSum
type: SiteQuality
SIO_000300: 7.74e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.515e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.93e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 1.237e1

FS
type: SiteQuality
SIO_000300: 1.1547e1

GenotypeDepth
all individuals: 93
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2925
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35581
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9257
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1664
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4290
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2993
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502584445245823e-5
allele num: 66552
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.96e-1

QD
type: SiteQuality
SIO_000300: 1.087e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.393e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

FS
type: SiteQuality
SIO_000300: 6.454e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 1.787258e6

VQSLOD
type: SiteQuality
SIO_000300: 1.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.37e-1

GenotypeDepth
all individuals: 65
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2998
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4289
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9262
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2918
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35630
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1667
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 1.1074e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.618e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e0

MQRankSum
type: SiteQuality
SIO_000300: 3.89e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.191e0

QD
type: SiteQuality
SIO_000300: 1.338e1

MQ
type: SiteQuality
SIO_000300: 5.983e1

DP
type: SiteQuality
SIO_000300: 1.78723e6

GenotypeDepth
all individuals: 580
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2998
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1668
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35640
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2916
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9256
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4287
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.218472036066772e-4
allele num: 16414
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.487e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.84e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.787231e6

MQ
type: SiteQuality
SIO_000300: 5.889e1

QD
type: SiteQuality
SIO_000300: 2.992e1

GenotypeDepth
all individuals: 341
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4281
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1664
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2918
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9244
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2996
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35552
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.275e-1

FS
type: SiteQuality
SIO_000300: 1.6863e1

DP
type: SiteQuality
SIO_000300: 1.787369e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

QD
type: SiteQuality
SIO_000300: 1.451e1

MQ
type: SiteQuality
SIO_000300: 5.766e1

MQRankSum
type: SiteQuality
SIO_000300: 2.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.194e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.76e0

GenotypeDepth
all individuals: 65
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9252
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36002
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2911
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1669
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3005
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4278
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50195253829979e-5
allele num: 66580
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

FS
type: SiteQuality
SIO_000300: 4.819e0

MQRankSum
type: SiteQuality
SIO_000300: 1.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.56e-1

DP
type: SiteQuality
SIO_000300: 1.788994e6

QD
type: SiteQuality
SIO_000300: 1.125e1

GenotypeDepth
all individuals: 612
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 65
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12293
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4279
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 978
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9279
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36121
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3006
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1674
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2917
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501862309263487e-5
allele num: 66584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

FS
type: SiteQuality
SIO_000300: 9.827e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.41e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.41e-1

QD
type: SiteQuality
SIO_000300: 1.02e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.01e-1

DP
type: SiteQuality
SIO_000300: 1.791206e6

GenotypeDepth
all individuals: 341
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 249
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1708
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9282
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2913
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1674
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3002
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4277
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 36111
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502042778178322e-5
allele num: 66576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.85e-1

DP
type: SiteQuality
SIO_000300: 1.791713e6

MQRankSum
type: SiteQuality
SIO_000300: -1.75e-1

MQ
type: SiteQuality
SIO_000300: 5.986e1

FS
type: SiteQuality
SIO_000300: 5.864e0

VQSLOD
type: SiteQuality
SIO_000300: 8.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

QD
type: SiteQuality
SIO_000300: 1.188e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.683e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.41e-1

GenotypeDepth
all individuals: 105
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 65
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2926
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 748
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1680
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3015
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36260
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9306
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4276
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 148
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66600
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.0790273556231e-5
allele num: 16450
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.871e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.48e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.792687e6

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.352e1

VQSLOD
type: SiteQuality
SIO_000300: 8.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.45e-1

FS
type: SiteQuality
SIO_000300: 8.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

GenotypeDepth
all individuals: 65
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 429
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3015
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36260
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9306
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 748
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1680
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4276
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2926
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66600
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.352e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.48e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

FS
type: SiteQuality
SIO_000300: 8.92e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.45e-1

DP
type: SiteQuality
SIO_000300: 1.792687e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.871e0

GenotypeDepth
all individuals: 1698
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9303
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3022
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4272
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36358
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2920
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1677
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002822653294096e-5
allele num: 66604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.46e-1

FS
type: SiteQuality
SIO_000300: 9.946e0

QD
type: SiteQuality
SIO_000300: 1.357e1

DP
type: SiteQuality
SIO_000300: 1.793242e6

VQSLOD
type: SiteQuality
SIO_000300: 2.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.947e1

GenotypeDepth
all individuals: 339
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 93
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9362
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2938
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36891
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1686
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3039
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4272
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 110
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 2.149e0

MQRankSum
type: SiteQuality
SIO_000300: 2.82e-1

DP
type: SiteQuality
SIO_000300: 1.797478e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

QD
type: SiteQuality
SIO_000300: 1.478e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.501e0

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

GenotypeDepth
all individuals: 102
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 428
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3031
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2935
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37045
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9367
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4273
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 85
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1684
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499880009599232e-5
allele num: 66672
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.15e0

VQSLOD
type: SiteQuality
SIO_000300: 3.83e0

DP
type: SiteQuality
SIO_000300: 1.799232e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.72e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.35e-1

QD
type: SiteQuality
SIO_000300: 1.226e1

GenotypeDepth
all individuals: 428
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 611
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4273
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 138
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1684
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2935
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3031
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37045
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9367
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.499640028797696e-5
allele num: 66672
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728608470181504e-4
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213886865744113e-4
allele num: 16476
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.799232e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

QD
type: SiteQuality
SIO_000300: 1.226e1

VQSLOD
type: SiteQuality
SIO_000300: 3.83e0

FS
type: SiteQuality
SIO_000300: 1.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.958e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.35e-1

GenotypeDepth
all individuals: 93
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4265
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37122
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3036
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9378
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1686
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2938
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.799207e6

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

MQRankSum
type: SiteQuality
SIO_000300: 4.47e-1

FS
type: SiteQuality
SIO_000300: 5.18e-1

QD
type: SiteQuality
SIO_000300: 1.371e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -7.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.88e-1

GenotypeDepth
all individuals: 610
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 84
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 64
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37122
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2938
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3036
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9378
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1686
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4265
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

MQRankSum
type: SiteQuality
SIO_000300: 4.47e-1

FS
type: SiteQuality
SIO_000300: 5.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -7.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.88e-1

DP
type: SiteQuality
SIO_000300: 1.799207e6

QD
type: SiteQuality
SIO_000300: 1.371e1

GenotypeDepth
all individuals: 101
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1703
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1691
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37194
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4263
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9389
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3035
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2935
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQ
type: SiteQuality
SIO_000300: 5.941e1

VQSLOD
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 1.435e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -7.16e-1

FS
type: SiteQuality
SIO_000300: 1.795e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.082e0

DP
type: SiteQuality
SIO_000300: 1.800096e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.61e0

GenotypeDepth
all individuals: 107
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 337
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2934
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37248
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3035
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9393
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4260
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.800321e6

VQSLOD
type: SiteQuality
SIO_000300: 9.3e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.633e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.79e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e0

MQRankSum
type: SiteQuality
SIO_000300: 3.38e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 249
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 93
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2933
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3033
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37281
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1689
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9400
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4260
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.323e0

MQRankSum
type: SiteQuality
SIO_000300: -4.7e-2

FS
type: SiteQuality
SIO_000300: 2.088e0

DP
type: SiteQuality
SIO_000300: 1.800713e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 8.57e-1

QD
type: SiteQuality
SIO_000300: 1.324e1

MQ
type: SiteQuality
SIO_000300: 5.907e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.245e0

VQSLOD
type: SiteQuality
SIO_000300: -3.196e-1

GenotypeDepth
all individuals: 1701
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11072
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1694
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2936
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4258
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 752
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3038
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9408
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37324
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499250374812594e-5
allele num: 66700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.379e0

FS
type: SiteQuality
SIO_000300: 1.2098e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.801266e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.16e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e-1

QD
type: SiteQuality
SIO_000300: 1.601e1

GenotypeDepth
all individuals: 100
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 250
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37370
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3037
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9412
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4256
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2928
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728608470181504e-4
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.23e-1

DP
type: SiteQuality
SIO_000300: 1.801855e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 8.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.98e-1

QD
type: SiteQuality
SIO_000300: 1.194e1

FS
type: SiteQuality
SIO_000300: 4.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.85e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeDepth
all individuals: 893
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 100
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9417
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37453
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4255
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3039
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1692
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2930
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 1.801808e6

VQSLOD
type: SiteQuality
SIO_000300: 4.95e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.63e-1

QD
type: SiteQuality
SIO_000300: 1.407e1

GenotypeDepth
all individuals: 893
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 43
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 65
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4255
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3039
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37453
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1692
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2930
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9417
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.311604253351826e-4
allele num: 8652
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.46e0

DP
type: SiteQuality
SIO_000300: 1.801808e6

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.95e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.407e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 337
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 11107
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2926
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37488
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4250
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1687
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3040
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9422
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 8.650519031141869e-4
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.428e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.400000000000001e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.467e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.39e-1

DP
type: SiteQuality
SIO_000300: 1.801793e6

GenotypeDepth
all individuals: 3342
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 892
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4244
bin: 9.75e1
variant carriers: 43

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2925
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37520
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9412
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3038
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1686
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 41
allele frequency: 6.144715544631617e-4
allele num: 66724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

FS
type: SiteQuality
SIO_000300: 5.15e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

DP
type: SiteQuality
SIO_000300: 1.802042e6

QD
type: SiteQuality
SIO_000300: 1.396e1

GenotypeDepth
all individuals: 93
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2927
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4197
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 749
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3032
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9431
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1677
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37626
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.93e-1

QD
type: SiteQuality
SIO_000300: 1.082e1

FS
type: SiteQuality
SIO_000300: 3.986e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.28e-1

DP
type: SiteQuality
SIO_000300: 1.799845e6

MQ
type: SiteQuality
SIO_000300: 5.975e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

GenotypeDepth
all individuals: 88
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 247
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2926
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9425
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3032
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4196
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 37644
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1677
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.320027648176948e-4
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.26e-1

FS
type: SiteQuality
SIO_000300: 1.774e0

DP
type: SiteQuality
SIO_000300: 1.799755e6

MQRankSum
type: SiteQuality
SIO_000300: 4.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.946e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.092e0

QD
type: SiteQuality
SIO_000300: 1.144e1

GenotypeDepth
all individuals: 40
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 29122
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4194
bin: 9.75e1
variant carriers: 35

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3033
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2927
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9423
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1675
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37654
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 30
allele frequency: 4.495459585818323e-4
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.456022118541559e-4
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.81e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.912e0

QD
type: SiteQuality
SIO_000300: 1.313e1

DP
type: SiteQuality
SIO_000300: 1.799933e6

GenotypeDepth
all individuals: 597
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 91
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3038
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1678
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4160
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37673
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9425
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2929
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.798356e6

FS
type: SiteQuality
SIO_000300: 4.372e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.13e0

MQRankSum
type: SiteQuality
SIO_000300: -1.268e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.148e-1

QD
type: SiteQuality
SIO_000300: 1.016e1

GenotypeDepth
all individuals: 63
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 74
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4158
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1678
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9424
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2929
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37677
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3039
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.964e1

DP
type: SiteQuality
SIO_000300: 1.79836e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.1e0

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

QD
type: SiteQuality
SIO_000300: 1.23e1

GenotypeDepth
all individuals: 328
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 90
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3037
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2929
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9423
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37681
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 972
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4159
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1677
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 748
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.41e0

MQRankSum
type: SiteQuality
SIO_000300: 1.25e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.2e-1

DP
type: SiteQuality
SIO_000300: 1.798212e6

QD
type: SiteQuality
SIO_000300: 1.135e1

GenotypeDepth
all individuals: 3330
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 39
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1678
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9423
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2929
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37692
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 972
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3035
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4158
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.798193e6

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.9e-2

QD
type: SiteQuality
SIO_000300: 1.224e1

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

FS
type: SiteQuality
SIO_000300: 8.84e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

GenotypeDepth
all individuals: 596
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 90
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3034
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4156
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9423
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2927
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1678
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37712
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 972
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.434e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.277e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.798065e6

FS
type: SiteQuality
SIO_000300: 1.3252e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.36e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: -1.701e0

MQRankSum
type: SiteQuality
SIO_000300: -9.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-2

GenotypeDepth
all individuals: 74
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 66
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2924
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9419
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 972
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4155
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 37709
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3033
bin: 7.25e1
variant carriers: 0