14-31191664-CTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191664
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191662
    reference: chr 14
allele count: 2
allele frequency: 1.696727013590783e-5
allele num: 117874
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-32_217-31delGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-32_*1535-31delGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-32_193-31delGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-32_1771-31delGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-32_1594-31delGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-32_1495-31delGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-32_1216-31delGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-32_*1191-31delGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-32_*232-31delGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-32_768-31delGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-32_*1241-31delGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-32_1570-31delGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-32_*1642-31delGT
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4507
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10541
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: CTG
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

14-31191664-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191664
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191664
    reference: chr 14
allele count: 5
allele frequency: 4.241817533976959e-5
allele num: 117874
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-36C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-36C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-36C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-36C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-36C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-36C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-36C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-36C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-36C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-36C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-36C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-36C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-36C>T
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13515
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4507
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-31191665-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191665
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191665
    reference: chr 14
allele count: 2
allele frequency: 1.695087636030783e-5
allele num: 117988
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-35T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-35T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-35T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-35T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-35T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-35T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-35T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-35T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-35T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-35T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-35T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-35T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-35T>G
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2919
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13414
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4073
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6595
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

14-31191666-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191666
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191666
    reference: chr 14
allele count: 1
allele frequency: 8.47802495930548e-6
allele num: 117952
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-34G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-34G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-34G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-34G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-34G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-34G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-34G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-34G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-34G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-34G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-34G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-34G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-34G>A
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13477
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10770
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6671
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7858
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4227
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

14-31191667-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191667
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191666
    reference: chr 14
allele count: 3
allele frequency: 2.561519151624857e-5
allele num: 117118
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-32delG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-32delG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-32delG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-32delG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-32delG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-32delG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-32delG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-32delG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-32delG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-32delG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-32delG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-32delG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-32delG
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 4373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6840
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7605
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2746
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4091
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13298
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10851
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: TG
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum

14-31191668-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191668
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191669
    reference: chr 14
allele count: 29359
allele frequency: 3.535354751697895e-1
allele num: 83044
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-19dupT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-19dupT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-19dupT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-19dupT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-19dupT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-19dupT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-19dupT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-19dupT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-19dupT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-19dupT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-19dupT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-19dupT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-19dupT
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8122
  bin: 3.75e1
  variant carriers: 4366
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 1.75e1
  variant carriers: 2276
genotype depth: GenotypeDepth
  all individuals: 5715
  bin: 4.25e1
  variant carriers: 3089
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 1.25e1
  variant carriers: 752
genotype depth: GenotypeDepth
  all individuals: 9756
  bin: 3.25e1
  variant carriers: 5457
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 5.25e1
  variant carriers: 1452
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 7.5e0
  variant carriers: 145
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 4.75e1
  variant carriers: 2018
genotype depth: GenotypeDepth
  all individuals: 9821
  bin: 2.75e1
  variant carriers: 5766
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.25e1
  variant carriers: 163
genotype depth: GenotypeDepth
  all individuals: 7398
  bin: 2.25e1
  variant carriers: 4697
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.25e1
  variant carriers: 666
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 205
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 5.75e1
  variant carriers: 971
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 9.25e1
  variant carriers: 120
genotype quality: GenotypeQuality
num of homozygotes: 120
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ

14-31191668-G-GTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191668
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191670
    reference: chr 14
allele count: 849
allele frequency: 1.022349597803574e-2
allele num: 83044
alternate allele: GTT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-20_193-19dupTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-20_1495-19dupTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-20_*1241-19dupTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-20_768-19dupTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-20_217-19dupTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-20_1594-19dupTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-20_*1535-19dupTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-20_*232-19dupTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-20_*1642-19dupTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-20_1570-19dupTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-20_1216-19dupTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-20_*1191-19dupTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-20_1771-19dupTT
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8122
  bin: 3.75e1
  variant carriers: 138
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7398
  bin: 2.25e1
  variant carriers: 226
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 5.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 4.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 1.25e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 1.75e1
  variant carriers: 119
genotype depth: GenotypeDepth
  all individuals: 9821
  bin: 2.75e1
  variant carriers: 210
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 5.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5715
  bin: 4.25e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

14-31191668-G-GTTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191668
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191671
    reference: chr 14
allele count: 8
allele frequency: 9.633447329126728e-5
allele num: 83044
alternate allele: GTTT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-21_*1241-19dupTTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-21_1570-19dupTTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-21_*1535-19dupTTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-21_*1191-19dupTTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-21_768-19dupTTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-21_*232-19dupTTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-21_1594-19dupTTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-21_217-19dupTTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-21_193-19dupTTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-21_1216-19dupTTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-21_*1642-19dupTTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-21_1495-19dupTTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-21_1771-19dupTTT
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7398
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8122
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5715
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9821
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9756
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

14-31191668-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191668
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191668
    reference: chr 14
allele count: 3
allele frequency: 3.612542748422523e-5
allele num: 83044
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-32G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-32G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-32G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-32G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-32G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-32G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-32G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-32G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-32G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-32G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-32G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-32G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-32G>T
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5715
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9821
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7398
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8122
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

14-31191668-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191668
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191667
    reference: chr 14
allele count: 6116
allele frequency: 7.364770483117383e-2
allele num: 83044
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-19delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-19delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-19delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-19delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-19delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-19delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-19delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-19delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-19delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-19delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-19delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-19delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-19delT
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 5715
  bin: 4.25e1
  variant carriers: 765
genotype depth: GenotypeDepth
  all individuals: 9756
  bin: 3.25e1
  variant carriers: 1692
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.25e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 5.25e1
  variant carriers: 294
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 5.75e1
  variant carriers: 191
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 1.75e1
  variant carriers: 475
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 6.75e1
  variant carriers: 96
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 4.75e1
  variant carriers: 442
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.25e1
  variant carriers: 122
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 7.5e0
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 1.25e1
  variant carriers: 140
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 9.75e1
  variant carriers: 303
genotype depth: GenotypeDepth
  all individuals: 7398
  bin: 2.25e1
  variant carriers: 1225
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
reference allele: GT
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

14-31191668-GTT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191668
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191666
    reference: chr 14
allele count: 22
allele frequency: 2.64919801550985e-4
allele num: 83044
alternate allele: G
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9821
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8122
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7398
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9756
  bin: 3.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5715
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2296
  bin: 3.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1381
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1602
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3357
  bin: 7.5e0
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 1943
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2996
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2237
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9469
  bin: 2.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 3089
  bin: 1.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3162
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1786
  bin: 4.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 17455
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1427
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2781
  bin: 2.75e1
  variant carriers: 5
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 16
  allele frequency: 3.548143877234222e-4
  allele num: 45094
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 1
  allele frequency: 1.273560876209883e-4
  allele num: 7852
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.209456473707468e-4
  allele num: 4526
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 614
  num of homozygotes: 0
population: East Asian
population: African
population: South Asian
reference allele: GTT
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

14-31191670-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191670
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191670
    reference: chr 14
allele count: 1
allele frequency: 1.454080148897807e-5
allele num: 68772
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-30T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-30T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-30T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-30T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-30T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-30T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-30T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-30T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-30T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-30T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-30T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-30T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-30T>C
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8007
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3772
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7831
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7021
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

14-31191670-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191670
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191670
    reference: chr 14
allele count: 56
allele frequency: 8.142848833827721e-4
allele num: 68772
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-30T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-30T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-30T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-30T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-30T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-30T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-30T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-30T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-30T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-30T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-30T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-30T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-30T>G
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7021
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7831
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3772
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8802
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8007
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP

14-31191670-T-TG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191670
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191671
    reference: chr 14
allele count: 5
allele frequency: 7.270400744489037e-5
allele num: 68772
alternate allele: TG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-30_1594-29insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-30_1570-29insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-30_*1642-29insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-30_*1241-29insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-30_*1535-29insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-30_1495-29insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-30_217-29insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-30_1771-29insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-30_193-29insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-30_768-29insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-30_*232-29insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-30_*1191-29insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-30_1216-29insG
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8802
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7831
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8007
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7021
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3772
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP

14-31191671-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191671
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191671
    reference: chr 14
allele count: 41
allele frequency: 3.429355281207133e-4
allele num: 119556
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-29T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-29T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-29T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-29T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-29T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-29T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-29T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-29T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-29T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-29T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-29T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-29T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-29T>G
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4888
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5865
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10818
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14696
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6567
  bin: 3.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff

14-31191671-T-TG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191671
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191672
    reference: chr 14
allele count: 1
allele frequency: 8.364281173675934e-6
allele num: 119556
alternate allele: TG
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-29_*1642-28insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-29_1495-28insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-29_193-28insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-29_1594-28insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-29_*232-28insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-29_*1241-28insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-29_1216-28insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-29_1771-28insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-29_*1535-28insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-29_1570-28insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-29_768-28insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-29_217-28insG
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-29_*1191-28insG
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14696
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4888
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

14-31191672-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191672
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191673
    reference: chr 14
allele count: 3
allele frequency: 2.489833181176861e-5
allele num: 120490
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-28_*1642-27insC
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-28_1216-27insC
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-28_1570-27insC
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-28_*1241-27insC
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-28_1594-27insC
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-28_*1535-27insC
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-28_*1191-27insC
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-28_1495-27insC
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-28_217-27insC
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-28_*232-27insC
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-28_1771-27insC
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-28_193-27insC
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-28_768-27insC
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10617
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15078
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2503
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4773
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP

14-31191674-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191674
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191674
    reference: chr 14
allele count: 6
allele frequency: 4.977187888842804e-5
allele num: 120550
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-26T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-26T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-26T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-26T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-26T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-26T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-26T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-26T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-26T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-26T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-26T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-26T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-26T>G
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5965
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15159
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

14-31191678-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191678
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191678
    reference: chr 14
allele count: 1
allele frequency: 8.288849839196314e-6
allele num: 120644
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-22T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-22T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-22T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-22T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-22T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-22T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-22T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-22T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-22T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-22T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-22T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-22T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-22T>C
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15584
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

14-31191687-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191687
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191687
    reference: chr 14
allele count: 2
allele frequency: 1.655327672112695e-5
allele num: 120822
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-13G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-13G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-13G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-13G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-13G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-13G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-13G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-13G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-13G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-13G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-13G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-13G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-13G>A
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16379
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6371
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

14-31191687-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191687
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191687
    reference: chr 14
allele count: 3
allele frequency: 2.482991508169042e-5
allele num: 120822
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-13G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-13G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-13G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-13G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-13G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-13G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-13G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-13G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-13G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-13G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-13G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-13G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-13G>T
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6371
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16379
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

14-31191695-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191695
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191695
    reference: chr 14
allele count: 1
allele frequency: 8.261049153242462e-6
allele num: 121050
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*232-5T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1594-5T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1495-5T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.193-5T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1241-5T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1771-5T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1191-5T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.217-5T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1535-5T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1216-5T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1642-5T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1570-5T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.768-5T>C
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6362
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3597
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4674
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1771-5T>C
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

14-31191706-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191706
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191706
    reference: chr 14
allele count: 7
allele frequency: 5.778819799887726e-5
allele num: 121132
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1197G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1222G>A
  hgvsp: ENSP00000443537.1:p.Val408Ile
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1777G>A
  hgvsp: ENSP00000390783.2:p.Val593Ile
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1600G>A
  hgvsp: ENSP00000388078.3:p.Val534Ile
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1501G>A
  hgvsp: ENSP00000379870.2:p.Val501Ile
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.223G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1247G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.774G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1541G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.199G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1648G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*238G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1576G>A
  hgvsp: ENSP00000443010.2:p.Val526Ile
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4672
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16637
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val593Ile
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: DP
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

14-31191712-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191712
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191712
    reference: chr 14
allele count: 2
allele frequency: 1.650900566258894e-5
allele num: 121146
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1228G>T
  hgvsp: ENSP00000443537.1:p.Val410Leu
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.229G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1783G>T
  hgvsp: ENSP00000390783.2:p.Val595Leu
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1606G>T
  hgvsp: ENSP00000388078.3:p.Val536Leu
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1654G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1507G>T
  hgvsp: ENSP00000379870.2:p.Val503Leu
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.205G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1547G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1582G>T
  hgvsp: ENSP00000443010.2:p.Val528Leu
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.780G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1253G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*244G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1203G>T
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6358
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Val595Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

14-31191717-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191717
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191717
    reference: chr 14
allele count: 1
allele frequency: 8.253276550790664e-6
allele num: 121164
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1788G>A
  hgvsp: ENST00000458591.2:c.1788G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.210G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1611G>A
  hgvsp: ENST00000421551.3:c.1611G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1552G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1587G>A
  hgvsp: ENST00000544052.2:c.1587G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1512G>A
  hgvsp: ENST00000396629.2:c.1512G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1258G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1233G>A
  hgvsp: ENST00000541123.1:c.1233G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.785G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.234G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1208G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1659G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*249G>A
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4668
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16648
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6364
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val596Val
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

14-31191726-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191726
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191726
    reference: chr 14
allele count: 1
allele frequency: 8.252595441266279e-6
allele num: 121174
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.794C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1217C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1242C>T
  hgvsp: ENST00000541123.1:c.1242C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1521C>T
  hgvsp: ENST00000396629.2:c.1521C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.219C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1596C>T
  hgvsp: ENST00000544052.2:c.1596C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1561C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1668C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*258C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1267C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1797C>T
  hgvsp: ENST00000458591.2:c.1797C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1620C>T
  hgvsp: ENST00000421551.3:c.1620C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.243C>T
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6876
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4674
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3596
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly599Gly
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

14-31191771-TTTTA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191771
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191767
    reference: chr 14
allele count: 1
allele frequency: 8.278831029058698e-6
allele num: 120790
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.282+11_282+14delTTTA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1306+11_*1306+14delTTTA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1281+11_1281+14delTTTA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1707+11_*1707+14delTTTA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1600+11_*1600+14delTTTA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.833+11_833+14delTTTA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1836+11_1836+14delTTTA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.269_272delTTTA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1635+11_1635+14delTTTA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1560+11_1560+14delTTTA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1256+11_*1256+14delTTTA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*297+11_*297+14delTTTA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1659+11_1659+14delTTTA
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10748
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1836+11_1836+14delTTTA
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
reference allele: TTTTA
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

14-31191772-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191772
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191772
    reference: chr 14
allele count: 27596
allele frequency: 2.288415291483539e-1
allele num: 120590
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1600+7T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*297+7T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1256+7T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.282+7T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1635+7T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1281+7T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.265T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1659+7T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1707+7T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.833+7T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1836+7T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1306+7T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1560+7T>C
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 7.25e1
  variant carriers: 934
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 8.25e1
  variant carriers: 572
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 9.75e1
  variant carriers: 2230
genotype depth: GenotypeDepth
  all individuals: 4425
  bin: 4.25e1
  variant carriers: 2676
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.25e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 9079
  bin: 3.25e1
  variant carriers: 1693
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 5.75e1
  variant carriers: 2192
genotype depth: GenotypeDepth
  all individuals: 5442
  bin: 2.25e1
  variant carriers: 453
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3224
  bin: 5.25e1
  variant carriers: 2513
genotype depth: GenotypeDepth
  all individuals: 5293
  bin: 3.75e1
  variant carriers: 2240
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.5e0
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 8.75e1
  variant carriers: 448
genotype quality: GenotypeQuality
hgvs: c.1836+7T>C
num of homozygotes: 3695
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/14-31191781-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191781
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191781
    reference: chr 14
allele count: 1
allele frequency: 8.33152816889674e-6
allele num: 120026
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1635+16C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1256+16C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*297+16C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1560+16C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.274C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.833+16C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1306+16C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.282+16C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1707+16C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1281+16C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1600+16C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1836+16C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1659+16C>A
  variant of: http://identifiers.org/hgnc/20726
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7578
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11745
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2429
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2854
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/14-31191791-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191791
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191791
    reference: chr 14
allele count: 1
allele frequency: 8.362602441879913e-6
allele num: 119580
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1707+26C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1281+26C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.284C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1256+26C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1659+26C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*297+26C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1306+26C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1560+26C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.282+26C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1836+26C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1600+26C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.833+26C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1635+26C>A
  variant of: http://identifiers.org/hgnc/20726
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4654
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3726
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10182
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2429
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

14-31191791-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191791
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191791
    reference: chr 14
allele count: 1
allele frequency: 8.362602441879913e-6
allele num: 119580
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1707+26C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1600+26C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1281+26C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.284C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1659+26C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1306+26C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*297+26C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1836+26C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.833+26C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.282+26C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1560+26C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1635+26C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1256+26C>T
  variant of: http://identifiers.org/hgnc/20726
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4654
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2429
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18813
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3726
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: QD

14-31191793-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191793
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191792
    reference: chr 14
allele count: 1
allele frequency: 8.369181326682624e-6
allele num: 119486
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1256+30delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.833+30delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1707+30delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1281+30delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1836+30delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1635+30delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*297+30delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.282+30delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1306+30delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1600+30delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.288delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1659+30delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1560+30delT
  variant of: http://identifiers.org/hgnc/20726
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4775
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7990
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2429
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9570
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2812
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1874
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: GT
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

14-31191800-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191800
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191800
    reference: chr 14
allele count: 1
allele frequency: 8.388135820695209e-6
allele num: 119216
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.293G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1256+35G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1635+35G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1836+35G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1281+35G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1707+35G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1306+35G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.833+35G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1659+35G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.282+35G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*297+35G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1600+35G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1560+35G>T
  variant of: http://identifiers.org/hgnc/20726
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7178
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4478
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15594
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

14-31191803-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191803
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191803
    reference: chr 14
allele count: 1
allele frequency: 8.412693071305987e-6
allele num: 118868
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1256+38G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.833+38G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*297+38G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1836+38G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1281+38G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.282+38G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1659+38G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.296G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1560+38G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1707+38G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1600+38G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1635+38G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1306+38G>T
  variant of: http://identifiers.org/hgnc/20726
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9329
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4600
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4426
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8057
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

14-31191804-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191804
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191804
    reference: chr 14
allele count: 6
allele frequency: 5.046512019109459e-5
allele num: 118894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.833+39G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1707+39G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1659+39G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1256+39G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1836+39G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*297+39G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.297G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1600+39G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1635+39G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1306+39G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.282+39G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1281+39G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1560+39G>A
  variant of: http://identifiers.org/hgnc/20726
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13535
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4611
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9312
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1869
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7980
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-31191809-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191809
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191809
    reference: chr 14
allele count: 1
allele frequency: 8.422896802668375e-6
allele num: 118724
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1256+44A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.302A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1836+44A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*297+44A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.833+44A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1560+44A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1281+44A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1306+44A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1707+44A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1635+44A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.282+44A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1600+44A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1659+44A>C
  variant of: http://identifiers.org/hgnc/20726
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4603
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4394
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2429
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10251
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

14-31191813-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191813
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191813
    reference: chr 14
allele count: 2
allele frequency: 1.68827660723933e-5
allele num: 118464
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1560+48G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*297+48G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1281+48G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1836+48G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1659+48G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1707+48G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1256+48G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.306G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1306+48G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.282+48G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.833+48G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1600+48G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1635+48G>A
  variant of: http://identifiers.org/hgnc/20726
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9509
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11098
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7388
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2429
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4571
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-31191815-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31191815
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31191815
    reference: chr 14
allele count: 1
allele frequency: 8.447372867038351e-6
allele num: 118380
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1600+50A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000555550
  gene symbol: SCFD1
  hgvsc: ENST00000555550.1:n.308A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1707+50A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1635+50A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1281+50A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1256+50A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*297+50A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.833+50A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1836+50A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1659+50A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1306+50A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.282+50A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1560+50A>C
  variant of: http://identifiers.org/hgnc/20726
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9461
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7267
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10743
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4562
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12187
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-31203956-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31203956
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31203956
    reference: chr 14
allele count: 129
allele frequency: 1.066715178778156e-3
allele num: 120932
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1307-40C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.283-40C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1708-40C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1561-40C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1837-40C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1601-40C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1660-40C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1257-40C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1636-40C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.257C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*298-40C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.834-40C>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1282-40C>A
  variant of: http://identifiers.org/hgnc/20726
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 3.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 10941
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 25425
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 4.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 11969
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 4.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

14-31203959-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31203959
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31203959
    reference: chr 14
allele count: 1
allele frequency: 8.267469162340024e-6
allele num: 120956
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1282-37G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.260G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1708-37G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*298-37G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1636-37G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1601-37G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1307-37G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1257-37G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1837-37G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.283-37G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1561-37G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.834-37G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1660-37G>A
  variant of: http://identifiers.org/hgnc/20726
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11977
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11254
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD

14-31203959-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31203959
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31203958
    reference: chr 14
allele count: 1
allele frequency: 8.267469162340024e-6
allele num: 120956
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.262delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1601-35delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1636-35delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.834-35delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1837-35delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1708-35delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1660-35delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.283-35delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1257-35delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1282-35delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1561-35delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1307-35delT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*298-35delT
  variant of: http://identifiers.org/hgnc/20726
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11254
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: GT
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

14-31203970-C-CTAAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31203970
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31203974
    reference: chr 14
allele count: 1
allele frequency: 8.261458643138033e-6
allele num: 121044
alternate allele: CTAAG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.273_276dupAAGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.283-24_283-21dupAAGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1660-24_1660-21dupAAGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1837-24_1837-21dupAAGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.834-24_834-21dupAAGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1561-24_1561-21dupAAGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1282-24_1282-21dupAAGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1257-24_*1257-21dupAAGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*298-24_*298-21dupAAGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1708-24_*1708-21dupAAGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1601-24_*1601-21dupAAGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1636-24_1636-21dupAAGT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1307-24_*1307-21dupAAGT
  variant of: http://identifiers.org/hgnc/20726
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3649
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

14-31203970-C-CTAAGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31203970
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31203975
    reference: chr 14
allele count: 1
allele frequency: 8.261458643138033e-6
allele num: 121044
alternate allele: CTAAGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1660-24_1660-20dupAAGTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1257-24_*1257-20dupAAGTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.283-24_283-20dupAAGTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.273_277dupAAGTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*298-24_*298-20dupAAGTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1708-24_*1708-20dupAAGTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1636-24_1636-20dupAAGTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1307-24_*1307-20dupAAGTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1837-24_1837-20dupAAGTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1282-24_1282-20dupAAGTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.834-24_834-20dupAAGTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1561-24_1561-20dupAAGTT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1601-24_*1601-20dupAAGTT
  variant of: http://identifiers.org/hgnc/20726
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3649
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ

14-31203974-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31203974
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31203974
    reference: chr 14
allele count: 1
allele frequency: 8.258047467256841e-6
allele num: 121094
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1282-22G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1561-22G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*298-22G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1636-22G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.275G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1837-22G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1257-22G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.834-22G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1708-22G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1601-22G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.283-22G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1660-22G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1307-22G>T
  variant of: http://identifiers.org/hgnc/20726
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11991
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

14-31203981-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31203981
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31203981
    reference: chr 14
allele count: 1
allele frequency: 8.253276550790664e-6
allele num: 121164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1282-15C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1636-15C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1307-15C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*298-15C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1601-15C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.282C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1837-15C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1708-15C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.834-15C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1257-15C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.283-15C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1561-15C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1660-15C>T
  variant of: http://identifiers.org/hgnc/20726
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25803
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum

14-31203984-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31203984
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31203984
    reference: chr 14
allele count: 1
allele frequency: 8.252595441266279e-6
allele num: 121174
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.834-12T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1307-12T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1837-12T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1561-12T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.285T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1660-12T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1636-12T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.283-12T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1282-12T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1601-12T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1708-12T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1257-12T>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*298-12T>G
  variant of: http://identifiers.org/hgnc/20726
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3649
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11989
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

14-31203991-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31203991
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31203992
    reference: chr 14
allele count: 3
allele frequency: 2.475410918212423e-5
allele num: 121192
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.834-4dupA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1837-4dupA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.283-4dupA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1257-4dupA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*298-4dupA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1561-4dupA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1282-4dupA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1601-4dupA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1708-4dupA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1307-4dupA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1660-4dupA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1636-4dupA
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.293dupA
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25840
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1837-4dupA
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

14-31203993-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31203993
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31203993
    reference: chr 14
allele count: 2
allele frequency: 1.65016501650165e-5
allele num: 121200
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1601-3C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1561-3C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1708-3C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1282-3C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1257-3C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.834-3C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.294C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1307-3C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.283-3C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1660-3C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1837-3C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*298-3C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1636-3C>T
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3650
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25834
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1837-3C>T
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum

14-31203995-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31203995
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31203995
    reference: chr 14
allele count: 1
allele frequency: 8.250688932525866e-6
allele num: 121202
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.296G>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.834-1G>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1307-1G>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1837-1G>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1601-1G>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1660-1G>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.283-1G>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1561-1G>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1257-1G>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1636-1G>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*298-1G>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1708-1G>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1282-1G>C
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11640
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12000
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1837-1G>C
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/14-31204014-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31204014
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31204014
    reference: chr 14
allele count: 11
allele frequency: 9.072763563781528e-5
allele num: 121242
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1579A>C
  hgvsp: ENSP00000379870.2:p.Ile527Leu
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1300A>C
  hgvsp: ENSP00000443537.1:p.Ile434Leu
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1678A>C
  hgvsp: ENSP00000388078.3:p.Ile560Leu
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1275A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1619A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.852A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.301A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1654A>C
  hgvsp: ENSP00000443010.2:p.Ile552Leu
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.315A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1325A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1726A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1855A>C
  hgvsp: ENSP00000390783.2:p.Ile619Leu
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*316A>C
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25881
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11999
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3649
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile619Leu
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ

14-31204034-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31204034
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31204034
    reference: chr 14
allele count: 1
allele frequency: 8.253140319891718e-6
allele num: 121166
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1698G>C
  hgvsp: ENSP00000388078.3:p.Glu566Asp
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1875G>C
  hgvsp: ENSP00000390783.2:p.Glu625Asp
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1320G>C
  hgvsp: ENSP00000443537.1:p.Glu440Asp
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1295G>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1674G>C
  hgvsp: ENSP00000443010.2:p.Glu558Asp
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1746G>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1599G>C
  hgvsp: ENSP00000379870.2:p.Glu533Asp
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*336G>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.335G>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.872G>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1345G>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1639G>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.321G>C
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11505
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu625Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

14-31204035-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31204035
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31204035
    reference: chr 14
allele count: 1
allele frequency: 8.253276550790664e-6
allele num: 121164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1346C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.873C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1640C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1321C>T
  hgvsp: ENSP00000443537.1:p.Leu441Phe
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.336C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1747C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1876C>T
  hgvsp: ENSP00000390783.2:p.Leu626Phe
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1675C>T
  hgvsp: ENSP00000443010.2:p.Leu559Phe
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1699C>T
  hgvsp: ENSP00000388078.3:p.Leu567Phe
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1600C>T
  hgvsp: ENSP00000379870.2:p.Leu534Phe
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1296C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*337C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.322C>T
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11999
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3651
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu626Phe
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/14-31204049-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31204049
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31204049
    reference: chr 14
allele count: 28
allele frequency: 2.31313198070187e-4
allele num: 121048
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.336A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1335A>C
  hgvsp: ENST00000541123.1:c.1335A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1614A>C
  hgvsp: ENST00000396629.2:c.1614A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*351A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1310A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1713A>C
  hgvsp: ENST00000421551.3:c.1713A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1654A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1761A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1890A>C
  hgvsp: ENST00000458591.2:c.1890A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1689A>C
  hgvsp: ENST00000544052.2:c.1689A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1360A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.887A>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.350A>C
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25903
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3652
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr630Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ

14-31204049-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31204049
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31204049
    reference: chr 14
allele count: 1
allele frequency: 8.261185645363822e-6
allele num: 121048
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1360A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.887A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1890A>G
  hgvsp: ENST00000458591.2:c.1890A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1614A>G
  hgvsp: ENST00000396629.2:c.1614A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1689A>G
  hgvsp: ENST00000544052.2:c.1689A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1713A>G
  hgvsp: ENST00000421551.3:c.1713A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1335A>G
  hgvsp: ENST00000541123.1:c.1335A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1310A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.336A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1761A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1654A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.350A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*351A>G
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3652
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr630Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

14-31204051-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31204051
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31204051
    reference: chr 14
allele count: 1
allele frequency: 8.263097008758882e-6
allele num: 121020
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1616A>G
  hgvsp: ENSP00000379870.2:p.Gln539Arg
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1656A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1892A>G
  hgvsp: ENSP00000390783.2:p.Gln631Arg
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1362A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1337A>G
  hgvsp: ENSP00000443537.1:p.Gln446Arg
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.338A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1715A>G
  hgvsp: ENSP00000388078.3:p.Gln572Arg
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1763A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1312A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1691A>G
  hgvsp: ENSP00000443010.2:p.Gln564Arg
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.889A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*353A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.352A>G
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3650
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12001
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25930
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln631Arg
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
reference allele: A
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

14-31204061-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31204061
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31204061
    reference: chr 14
allele count: 1
allele frequency: 8.277186418792524e-6
allele num: 120814
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1626A>G
  hgvsp: ENST00000396629.2:c.1626A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1725A>G
  hgvsp: ENST00000421551.3:c.1725A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.899A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1347A>G
  hgvsp: ENST00000541123.1:c.1347A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1773A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.362A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1322A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1372A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.348A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1902A>G
  hgvsp: ENST00000458591.2:c.1902A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1701A>G
  hgvsp: ENST00000544052.2:c.1701A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*363A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1666A>G
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11969
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10977
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25818
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys634Lys
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

14-31204062-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31204062
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31204062
    reference: chr 14
allele count: 1
allele frequency: 8.278968109414843e-6
allele num: 120788
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1667C>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.900C>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1774C>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1726C>G
  hgvsp: ENSP00000388078.3:p.Gln576Glu
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1348C>G
  hgvsp: ENSP00000443537.1:p.Gln450Glu
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1627C>G
  hgvsp: ENSP00000379870.2:p.Gln543Glu
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*364C>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.363C>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1903C>G
  hgvsp: ENSP00000390783.2:p.Gln635Glu
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1373C>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1702C>G
  hgvsp: ENSP00000443010.2:p.Gln568Glu
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.349C>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1323C>G
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25803
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10915
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln635Glu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD

14-31204064-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31204064
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31204064
    reference: chr 14
allele count: 1
allele frequency: 8.283906027370025e-6
allele num: 120716
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.902G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1325G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1669G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1375G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*366G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1629G>A
  hgvsp: ENST00000396629.2:c.1629G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1905G>A
  hgvsp: ENST00000458591.2:c.1905G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.365G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1728G>A
  hgvsp: ENST00000421551.3:c.1728G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.351G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1776G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1704G>A
  hgvsp: ENST00000544052.2:c.1704G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1350G>A
  hgvsp: ENST00000541123.1:c.1350G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25772
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1905G>A
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum

14-31204067-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31204067
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31204067
    reference: chr 14
allele count: 2
allele frequency: 1.657824933687002e-5
allele num: 120640
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1728+3A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.365+3A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1776+3A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1325+3A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*366+3A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1350+3A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1704+3A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1905+3A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1375+3A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.902+3A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1669+3A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1629+3A>G
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.351+3A>G
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11913
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25697
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1905+3A>G
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

14-31204073-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31204073
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31204073
    reference: chr 14
allele count: 1
allele frequency: 8.309788931361144e-6
allele num: 120340
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1905+9T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1325+9T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1704+9T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1350+9T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.365+9T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1375+9T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1629+9T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*366+9T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.902+9T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.351+9T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1728+9T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1669+9T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1776+9T>C
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11848
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10193
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP

14-31204075-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31204075
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31204075
    reference: chr 14
allele count: 1
allele frequency: 8.31766839119658e-6
allele num: 120226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*366+11C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1704+11C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1905+11C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1350+11C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.365+11C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1629+11C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1325+11C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1375+11C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.902+11C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1669+11C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.351+11C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1776+11C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1728+11C>T
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11812
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25216
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

14-31204104-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31204104
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31204104
    reference: chr 14
allele count: 1
allele frequency: 8.466826971924002e-6
allele num: 118108
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1325+40C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.351+40C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1375+40C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1905+40C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*366+40C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1629+40C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1728+40C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1776+40C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1350+40C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1704+40C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.902+40C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.365+40C>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1669+40C>T
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14012
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12576
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7894
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

14-31204112-CTATTGG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31204112
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31204106
    reference: chr 14
allele count: 1
allele frequency: 8.604667171473808e-6
allele num: 116216
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.365+53_365+58delGGTATT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1350+53_1350+58delGGTATT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.902+53_902+58delGGTATT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1728+53_1728+58delGGTATT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1776+53_*1776+58delGGTATT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1669+53_*1669+58delGGTATT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1629+53_1629+58delGGTATT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.351+53_351+58delGGTATT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*366+53_*366+58delGGTATT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1905+53_1905+58delGGTATT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1325+53_*1325+58delGGTATT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1375+53_*1375+58delGGTATT
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1704+53_1704+58delGGTATT
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13437
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7830
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9410
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: CTATTGG
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

14-31204115-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31204115
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31204115
    reference: chr 14
allele count: 3
allele frequency: 2.608514190317195e-5
allele num: 115008
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1325+51T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.902+51T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1629+51T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1669+51T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*366+51T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.351+51T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.365+51T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1905+51T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1728+51T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1350+51T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1375+51T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1704+51T>C
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1776+51T>C
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7786
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13096
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8960
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5047
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13364
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ

14-31204747-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31204747
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31204747
    reference: chr 14
allele count: 12
allele frequency: 9.987349357480525e-5
allele num: 120152
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1376-45G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1906-45G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.903-45G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1670-45G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*367-45G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.352-45G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.366-45G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258558
  ensembl transcript: ENST00000554665
  gene symbol: RP11-159L20.2
  hgvsc: ENST00000554665.1:n.257-442C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1351-45G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1326-45G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1705-45G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1630-45G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1777-45G>A
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1729-45G>A
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3841
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9407
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7509
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

14-31204747-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31204747
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 31204747
    reference: chr 14
allele count: 2
allele frequency: 1.664558226246754e-5
allele num: 120152
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000450546
  ensembl transcript: ENST00000554437
  gene symbol: SCFD1
  hgvsc: ENST00000554437.1:c.*367-45G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000452178
  ensembl transcript: ENST00000484733
  gene symbol: SCFD1
  hgvsc: ENST00000484733.2:c.*1777-45G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000553280
  gene symbol: SCFD1
  hgvsc: ENST00000553280.1:n.366-45G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000388078
  ensembl transcript: ENST00000421551
  gene symbol: SCFD1
  hgvsc: ENST00000421551.3:c.1729-45G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443537
  ensembl transcript: ENST00000541123
  gene symbol: SCFD1
  hgvsc: ENST00000541123.1:c.1351-45G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000390783
  ensembl transcript: ENST00000458591
  gene symbol: SCFD1
  hgvsc: ENST00000458591.2:c.1906-45G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000379870
  ensembl transcript: ENST00000396629
  gene symbol: SCFD1
  hgvsc: ENST00000396629.2:c.1630-45G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556486
  gene symbol: SCFD1
  hgvsc: ENST00000556486.1:n.903-45G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000309417
  ensembl transcript: ENST00000311943
  gene symbol: SCFD1
  hgvsc: ENST00000311943.7:c.*1326-45G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000443010
  ensembl transcript: ENST00000544052
  gene symbol: SCFD1
  hgvsc: ENST00000544052.2:c.1705-45G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl transcript: ENST00000556256
  gene symbol: SCFD1
  hgvsc: ENST00000556256.1:n.352-45G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451811
  ensembl transcript: ENST00000556768
  gene symbol: SCFD1
  hgvsc: ENST00000556768.1:c.*1376-45G>T
  variant of: http://identifiers.org/hgnc/20726
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258558
  ensembl transcript: ENST00000554665
  gene symbol: RP11-159L20.2
  hgvsc: ENST00000554665.1:n.257-442C>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000092108
  ensembl protein: ENSP00000451298
  ensembl transcript: ENST00000463622
  gene symbol: SCFD1
  hgvsc: ENST00000463622.2:c.*1670-45G>T
  variant of: http://identifiers.org/hgnc/20726
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3841
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6983
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

GenotypeDepth
all individuals: 396
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13515
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3937
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2581
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2033
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1357
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1052
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3060
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2240
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3716
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14211
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13035
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5381
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2655
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2504
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1416
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1369
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2461
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2801
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.005631536604988e-4
allele num: 9944
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11240
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.543638665061283e-5
allele num: 64782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16226
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.56e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
SIO_000300: -3.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.19e-1

DP
type: SiteQuality
SIO_000300: 2.072094e6

QD
type: SiteQuality
SIO_000300: 9.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

FS
type: SiteQuality
SIO_000300: 4.905e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.39e-1

GenotypeDepth
all individuals: 10541
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1763
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1081
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 219
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2801
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5381
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14211
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2504
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1416
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2461
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13035
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1369
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3716
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2033
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2655
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2240
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3060
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1357
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1052
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.718193325306412e-5
allele num: 64782
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16226
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9944
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8274
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.905e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 2.072094e6

MQRankSum
type: SiteQuality
SIO_000300: -3.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

QD
type: SiteQuality
SIO_000300: 9.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.19e-1

GenotypeDepth
all individuals: 347
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1790
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1109
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 767
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2547
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2464
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2750
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2533
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1339
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1499
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3091
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2074
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2256
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3786
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1427
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1325
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5431
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13415
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13047
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9978
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8296
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.083944982421514e-5
allele num: 64852
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16206
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.357e0

MQRankSum
type: SiteQuality
SIO_000300: -4.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

QD
type: SiteQuality
SIO_000300: 1.209e1

FS
type: SiteQuality
SIO_000300: 7.202e0

VQSLOD
type: SiteQuality
SIO_000300: -3.63e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.13e-1

DP
type: SiteQuality
SIO_000300: 2.084579e6

GenotypeDepth
all individuals: 215
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1114
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 570
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2648
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2416
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5434
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2686
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1437
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2540
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13078
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 121
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1991
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13935
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2259
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1321
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1430
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2532
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3774
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3092
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1305
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16204
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9980
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.542400592281827e-5
allele num: 64834
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8290
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11250
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-2

DP
type: SiteQuality
SIO_000300: 2.092459e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.73e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.41e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.54e0

QD
type: SiteQuality
SIO_000300: 1.27e1

GenotypeDepth
all individuals: 357
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1302
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 600
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 217
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2652
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 371
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1432
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2374
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13015
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1289
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2506
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2038
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1314
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3064
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3754
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2416
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5323
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2248
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12968
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8250
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.033367037411527e-4
allele num: 9890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16086
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11140
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.112462e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.14e-1

QD
type: SiteQuality
SIO_000300: 1.63e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

FS
type: SiteQuality
SIO_000300: 6.243e0

MQ
type: SiteQuality
SIO_000300: 5.875e1

VQSLOD
type: SiteQuality
SIO_000300: -1.123e0

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-2

GenotypeDepth
all individuals: 1761
bin: 9.75e1
variant carriers: 901

GenotypeDepth
all individuals: 326
bin: 8.75e1
variant carriers: 170

GenotypeDepth
all individuals: 643
bin: 7.25e1
variant carriers: 333

GenotypeDepth
all individuals: 930
bin: 6.75e1
variant carriers: 462

GenotypeQuality
all individuals: 1381
bin: 6.25e1
variant carriers: 772

GenotypeQuality
all individuals: 855
bin: 8.25e1
variant carriers: 613

GenotypeQuality
all individuals: 3162
bin: 2.25e1
variant carriers: 1302

GenotypeQuality
all individuals: 956
bin: 7.75e1
variant carriers: 635

GenotypeQuality
all individuals: 836
bin: 8.75e1
variant carriers: 620

GenotypeQuality
all individuals: 2996
bin: 1.75e1
variant carriers: 1174

GenotypeQuality
all individuals: 2296
bin: 3.25e1
variant carriers: 1111

GenotypeQuality
all individuals: 3089
bin: 1.25e1
variant carriers: 1165

GenotypeQuality
all individuals: 17455
bin: 9.75e1
variant carriers: 16225

GenotypeQuality
all individuals: 2781
bin: 2.75e1
variant carriers: 1258

GenotypeQuality
all individuals: 9469
bin: 2.5e0
variant carriers: 1090

GenotypeQuality
all individuals: 1427
bin: 5.75e1
variant carriers: 816

GenotypeQuality
all individuals: 3357
bin: 7.5e0
variant carriers: 1227

GenotypeQuality
all individuals: 2237
bin: 3.75e1
variant carriers: 1074

GenotypeQuality
all individuals: 1602
bin: 5.25e1
variant carriers: 905

GenotypeQuality
all individuals: 747
bin: 9.25e1
variant carriers: 566

GenotypeQuality
all individuals: 1943
bin: 4.25e1
variant carriers: 1032

GenotypeQuality
all individuals: 1786
bin: 4.75e1
variant carriers: 973

GenotypeQuality
all individuals: 1096
bin: 7.25e1
variant carriers: 684

GenotypeQuality
all individuals: 1172
bin: 6.75e1
variant carriers: 771

South Asian
type: Population
allele count: 4598
allele frequency: 3.901238757848294e-1
allele num: 11786
num of homozygotes: 14

European (Non-Finnish)
type: Population
allele count: 15544
allele frequency: 3.447021776733046e-1
allele num: 45094
num of homozygotes: 70

African
type: Population
allele count: 2460
allele frequency: 3.448275862068966e-1
allele num: 7134
num of homozygotes: 9

Other
type: Population
allele count: 218
allele frequency: 3.550488599348534e-1
allele num: 614
num of homozygotes: 0

East Asian
type: Population
allele count: 2256
allele frequency: 3.736336535276581e-1
allele num: 6038
num of homozygotes: 6

Latino
type: Population
allele count: 2855
allele frequency: 3.636016301579216e-1
allele num: 7852
num of homozygotes: 13

European (Finnish)
type: Population
allele count: 1428
allele frequency: 3.155103844454265e-1
allele num: 4526
num of homozygotes: 8

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.764e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.97e-1

QD
type: SiteQuality
SIO_000300: 3.56e0

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

DP
type: SiteQuality
SIO_000300: 2.351739e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

GenotypeDepth
all individuals: 1284
bin: 6.25e1
variant carriers: 15

GenotypeDepth
all individuals: 252
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 930
bin: 6.75e1
variant carriers: 10

GenotypeDepth
all individuals: 9756
bin: 3.25e1
variant carriers: 167

GenotypeQuality
all individuals: 2781
bin: 2.75e1
variant carriers: 78

GenotypeQuality
all individuals: 1602
bin: 5.25e1
variant carriers: 39

GenotypeQuality
all individuals: 1381
bin: 6.25e1
variant carriers: 29

GenotypeQuality
all individuals: 3089
bin: 1.25e1
variant carriers: 65

GenotypeQuality
all individuals: 1172
bin: 6.75e1
variant carriers: 25

GenotypeQuality
all individuals: 2237
bin: 3.75e1
variant carriers: 55

GenotypeQuality
all individuals: 2996
bin: 1.75e1
variant carriers: 61

GenotypeQuality
all individuals: 3357
bin: 7.5e0
variant carriers: 75

GenotypeQuality
all individuals: 836
bin: 8.75e1
variant carriers: 25

GenotypeQuality
all individuals: 9469
bin: 2.5e0
variant carriers: 98

GenotypeQuality
all individuals: 1096
bin: 7.25e1
variant carriers: 25

GenotypeQuality
all individuals: 1943
bin: 4.25e1
variant carriers: 40

GenotypeQuality
all individuals: 1427
bin: 5.75e1
variant carriers: 34

GenotypeQuality
all individuals: 2296
bin: 3.25e1
variant carriers: 64

GenotypeQuality
all individuals: 747
bin: 9.25e1
variant carriers: 22

GenotypeQuality
all individuals: 17455
bin: 9.75e1
variant carriers: 240

GenotypeQuality
all individuals: 956
bin: 7.75e1
variant carriers: 34

GenotypeQuality
all individuals: 1786
bin: 4.75e1
variant carriers: 49

GenotypeQuality
all individuals: 3162
bin: 2.25e1
variant carriers: 73

GenotypeQuality
all individuals: 855
bin: 8.25e1
variant carriers: 24

European (Finnish)
type: Population
allele count: 36
allele frequency: 7.954043305346884e-3
allele num: 4526
num of homozygotes: 0

East Asian
type: Population
allele count: 63
allele frequency: 1.043391851606492e-2
allele num: 6038
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 444
allele frequency: 9.846099259324965e-3
allele num: 45094
num of homozygotes: 0

Other
type: Population
allele count: 8
allele frequency: 1.302931596091205e-2
allele num: 614
num of homozygotes: 0

African
type: Population
allele count: 64
allele frequency: 8.971124194000561e-3
allele num: 7134
num of homozygotes: 0

Latino
type: Population
allele count: 81
allele frequency: 1.031584309730005e-2
allele num: 7852
num of homozygotes: 0

South Asian
type: Population
allele count: 153
allele frequency: 1.298150347870355e-2
allele num: 11786
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e-1

DP
type: SiteQuality
SIO_000300: 2.351739e6

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.764e-1

QD
type: SiteQuality
SIO_000300: 3.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

GenotypeDepth
all individuals: 447
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 252
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1873
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 346
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1096
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2781
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1602
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3162
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 747
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3089
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 17455
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2296
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9469
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 1943
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 836
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2996
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1786
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1172
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3357
bin: 7.5e0
variant carriers: 5

GenotypeQuality
all individuals: 1427
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 956
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2237
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 855
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7134
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.484642796538266e-5
allele num: 11786
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.656177542232527e-4
allele num: 6038
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.330553953962833e-4
allele num: 45094
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.351739e6

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.97e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.764e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

MQ
type: SiteQuality
SIO_000300: 5.953e1

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

QD
type: SiteQuality
SIO_000300: 3.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e-1

GenotypeDepth
all individuals: 643
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1873
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 252
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 346
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3089
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2237
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1602
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2996
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3357
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9469
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2296
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2781
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3162
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1172
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1096
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1943
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1427
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17455
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 956
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1786
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7134
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.484642796538266e-5
allele num: 11786
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6038
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.435179846542777e-5
allele num: 45094
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7852
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

QD
type: SiteQuality
SIO_000300: 3.56e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.764e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e-1

DP
type: SiteQuality
SIO_000300: 2.351739e6

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.97e-1

GenotypeDepth
all individuals: 9821
bin: 2.75e1
variant carriers: 1727

GenotypeDepth
all individuals: 447
bin: 7.75e1
variant carriers: 52

GenotypeDepth
all individuals: 252
bin: 9.25e1
variant carriers: 39

GenotypeDepth
all individuals: 8122
bin: 3.75e1
variant carriers: 1241

GenotypeQuality
all individuals: 2237
bin: 3.75e1
variant carriers: 546

GenotypeQuality
all individuals: 1381
bin: 6.25e1
variant carriers: 261

GenotypeQuality
all individuals: 17455
bin: 9.75e1
variant carriers: 919

GenotypeQuality
all individuals: 2296
bin: 3.25e1
variant carriers: 526

GenotypeQuality
all individuals: 1786
bin: 4.75e1
variant carriers: 412

GenotypeQuality
all individuals: 3089
bin: 1.25e1
variant carriers: 669

GenotypeQuality
all individuals: 1172
bin: 6.75e1
variant carriers: 203

GenotypeQuality
all individuals: 2996
bin: 1.75e1
variant carriers: 734

GenotypeQuality
all individuals: 836
bin: 8.75e1
variant carriers: 119

GenotypeQuality
all individuals: 3357
bin: 7.5e0
variant carriers: 747

GenotypeQuality
all individuals: 3162
bin: 2.25e1
variant carriers: 759

GenotypeQuality
all individuals: 1602
bin: 5.25e1
variant carriers: 339

GenotypeQuality
all individuals: 9469
bin: 2.5e0
variant carriers: 678

GenotypeQuality
all individuals: 747
bin: 9.25e1
variant carriers: 101

GenotypeQuality
all individuals: 1427
bin: 5.75e1
variant carriers: 335

GenotypeQuality
all individuals: 2781
bin: 2.75e1
variant carriers: 630

GenotypeQuality
all individuals: 1096
bin: 7.25e1
variant carriers: 226

GenotypeQuality
all individuals: 956
bin: 7.75e1
variant carriers: 171

GenotypeQuality
all individuals: 855
bin: 8.25e1
variant carriers: 130

GenotypeQuality
all individuals: 1943
bin: 4.25e1
variant carriers: 453

European (Finnish)
type: Population
allele count: 159
allele frequency: 3.513035793194874e-2
allele num: 4526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3549
allele frequency: 7.870226637690159e-2
allele num: 45094
num of homozygotes: 0

South Asian
type: Population
allele count: 974
allele frequency: 8.264042083828271e-2
allele num: 11786
num of homozygotes: 0

Latino
type: Population
allele count: 572
allele frequency: 7.28476821192053e-2
allele num: 7852
num of homozygotes: 0

African
type: Population
allele count: 453
allele frequency: 6.349873843566022e-2
allele num: 7134
num of homozygotes: 0

East Asian
type: Population
allele count: 366
allele frequency: 6.06160980457105e-2
allele num: 6038
num of homozygotes: 0

Other
type: Population
allele count: 43
allele frequency: 7.003257328990228e-2
allele num: 614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

DP
type: SiteQuality
SIO_000300: 2.351739e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.764e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6038
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.401738155312588e-4
allele num: 7134
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.54539283896148e-4
allele num: 11786
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

DP
type: SiteQuality
SIO_000300: 2.351739e6

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.56e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.764e-1

GenotypeDepth
all individuals: 3959
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 469
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 332
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2463
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1768
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1774
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4682
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2565
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20804
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1728
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1536
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1709
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1561
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1872
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1766
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1453
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1384
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1051
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1516
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 969
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6479
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1771
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1808
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4820
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.660281989890928e-5
allele num: 37590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6122
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8196
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6288
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.323e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 1.088e0

QD
type: SiteQuality
SIO_000300: 8.99e0

DP
type: SiteQuality
SIO_000300: 2.705255e6

MQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.524e0

GenotypeDepth
all individuals: 1494
bin: 6.75e1
variant carriers: 5

GenotypeDepth
all individuals: 332
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2015
bin: 6.25e1
variant carriers: 5

GenotypeDepth
all individuals: 1192
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1384
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1766
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4682
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1051
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20804
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1808
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1728
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1872
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1536
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1771
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1453
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1516
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6479
bin: 9.75e1
variant carriers: 55

GenotypeQuality
all individuals: 1709
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 969
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2565
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1561
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1768
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1774
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 4
allele frequency: 6.361323155216285e-4
allele num: 6288
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.901140684410646e-4
allele num: 5260
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.064112795956371e-4
allele num: 37590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8196
num of homozygotes: 0

African
type: Population
allele count: 47
allele frequency: 7.677229663508658e-3
allele num: 6122
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4820
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.323e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 8.99e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.524e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e0

FS
type: SiteQuality
SIO_000300: 1.088e0

VQSLOD
type: SiteQuality
SIO_000300: 7.12e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

DP
type: SiteQuality
SIO_000300: 2.705255e6

GenotypeDepth
all individuals: 679
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3959
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2015
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 332
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1384
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1766
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1771
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1774
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1808
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4682
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1872
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20804
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1051
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1516
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2565
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6479
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1536
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1453
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1561
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1709
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1728
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1768
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 969
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5260
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6122
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6288
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.660322108345535e-4
allele num: 8196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.074688796680498e-4
allele num: 4820
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.660281989890928e-5
allele num: 37590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.524e0

MQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

VQSLOD
type: SiteQuality
SIO_000300: 7.12e-1

FS
type: SiteQuality
SIO_000300: 1.088e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
SIO_000300: 8.99e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.323e-1

DP
type: SiteQuality
SIO_000300: 2.705255e6

GenotypeDepth
all individuals: 597
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 261
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3657
bin: 4.75e1
variant carriers: 6

GenotypeDepth
all individuals: 318
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3418
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3440
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14826
bin: 9.75e1
variant carriers: 39

GenotypeQuality
all individuals: 806
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4266
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15276
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1182
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 908
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2545
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6976
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2126
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1078
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16322
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.17426021606388e-4
allele num: 8516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.521606816798539e-4
allele num: 6572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.434719094284497e-4
allele num: 65716
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.96347928529354e-4
allele num: 10186
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.242152466367713e-3
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 19
allele frequency: 1.673713883016209e-3
allele num: 11352
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.79e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.632e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.86e0

DP
type: SiteQuality
SIO_000300: 2.496699e6

MQ
type: SiteQuality
SIO_000300: 5.952e1

MQRankSum
type: SiteQuality
SIO_000300: 2.76e-1

QD
type: SiteQuality
SIO_000300: 1.371e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

GenotypeDepth
all individuals: 1829
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 597
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2452
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 261
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3418
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 908
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1182
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15276
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6976
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14826
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 806
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4266
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3440
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2545
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2126
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1078
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10186
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521699433927811e-5
allele num: 65716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.371e1

MQRankSum
type: SiteQuality
SIO_000300: 2.76e-1

DP
type: SiteQuality
SIO_000300: 2.496699e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.86e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.632e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

GenotypeDepth
all individuals: 594
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 762
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6436
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3623
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2601
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 841
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15022
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 826
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4419
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16619
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3527
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3542
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7342
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.038590094196293e-4
allele num: 6582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508341126429153e-5
allele num: 66298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.49e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.54e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e-1

QD
type: SiteQuality
SIO_000300: 2.956e1

VQSLOD
type: SiteQuality
SIO_000300: 3.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

MQ
type: SiteQuality
SIO_000300: 6.033e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.289e0

DP
type: SiteQuality
SIO_000300: 2.504102e6

GenotypeDepth
all individuals: 3619
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10627
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 4778
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2500
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2602
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7363
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16777
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3536
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3551
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 831
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2157
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4429
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15023
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 387
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.045953443492944e-5
allele num: 66328
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

QD
type: SiteQuality
SIO_000300: 1.88e1

MQ
type: SiteQuality
SIO_000300: 5.932e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.277e0

MQRankSum
type: SiteQuality
SIO_000300: 9.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.57e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.50497e6

VQSLOD
type: SiteQuality
SIO_000300: 2.83e-1

GenotypeDepth
all individuals: 592
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 710
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 461
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4780
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2600
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4426
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15021
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 284
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3535
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7470
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18510
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2159
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3553
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506250941406838e-5
allele num: 66390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e0

DP
type: SiteQuality
SIO_000300: 2.510728e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQ
type: SiteQuality
SIO_000300: 5.945e1

FS
type: SiteQuality
SIO_000300: 4.025e0

VQSLOD
type: SiteQuality
SIO_000300: 2.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.398e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

QD
type: SiteQuality
SIO_000300: 1.608e1

GenotypeDepth
all individuals: 753
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 465
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4690
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1814
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3592
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7658
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4443
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3511
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15111
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 20265
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2139
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2557
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.008876184744998e-5
allele num: 66470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.51929e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.299e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

FS
type: SiteQuality
SIO_000300: 6.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -9.2e-2

QD
type: SiteQuality
SIO_000300: 7.89e0

GenotypeDepth
all individuals: 4690
bin: 4.25e1
variant carriers: 2

GenotypeDepth
all individuals: 6650
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1814
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1289
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 36
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3592
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7658
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2557
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3511
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20265
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15111
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 4443
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2139
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.513314277117496e-5
allele num: 66470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.51929e6

VQSLOD
type: SiteQuality
SIO_000300: 8.62e-1

MQ
type: SiteQuality
SIO_000300: 5.946e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.299e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.8e-2

FS
type: SiteQuality
SIO_000300: 6.64e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

QD
type: SiteQuality
SIO_000300: 7.89e0

GenotypeDepth
all individuals: 6856
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 755
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1809
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 597
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16582
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 314
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 465
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3542
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7779
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2164
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15175
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20899
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2581
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4500
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3650
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501907422426482e-5
allele num: 66582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.21e-1

DP
type: SiteQuality
SIO_000300: 2.522784e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

QD
type: SiteQuality
SIO_000300: 1.255e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.474e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.26e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.16e-2

GenotypeDepth
all individuals: 1282
bin: 6.25e1
variant carriers: 2

GenotypeDepth
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2497
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 314
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6865
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 599
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7781
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3653
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4498
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15182
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2583
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2159
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3542
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20958
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.050672430355427e-4
allele num: 66624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.525023e6

QD
type: SiteQuality
SIO_000300: 9.640000000000001e0

FS
type: SiteQuality
SIO_000300: 5.43e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

MQRankSum
type: SiteQuality
SIO_000300: -1.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.227e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.25e-1

GenotypeDepth
all individuals: 39
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 755
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1809
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 465
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 945
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4672
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4498
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20990
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15175
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2582
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7784
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2161
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3657
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3545
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.0016509079994e-5
allele num: 66630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.779e0

MQRankSum
type: SiteQuality
SIO_000300: -3.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.32e-2

VQSLOD
type: SiteQuality
SIO_000300: 9.94e-1

DP
type: SiteQuality
SIO_000300: 2.524803e6

FS
type: SiteQuality
SIO_000300: 1.636e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e-1

QD
type: SiteQuality
SIO_000300: 1.352e1

GenotypeDepth
all individuals: 6889
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2462
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 946
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10917
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 597
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21030
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7788
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2162
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4501
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3654
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15176
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2583
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3545
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500600240096038e-5
allele num: 66640
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.525096e6

MQ
type: SiteQuality
SIO_000300: 5.991e1

QD
type: SiteQuality
SIO_000300: 2.47e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.84e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.345e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.97e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.651e0

GenotypeDepth
all individuals: 16678
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2496
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 598
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6365
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 945
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2166
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3545
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3656
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2586
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4504
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7788
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21032
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15180
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 131
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5004651441947e-5
allele num: 66646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.804e0

MQ
type: SiteQuality
SIO_000300: 5.941e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e0

FS
type: SiteQuality
SIO_000300: 4.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.9e-1

DP
type: SiteQuality
SIO_000300: 2.525138e6

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.65e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e-1

QD
type: SiteQuality
SIO_000300: 9.619999999999999e0

GenotypeDepth
all individuals: 2459
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4676
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6344
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2496
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1807
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 945
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4469
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7522
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3599
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2165
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2581
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3534
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19405
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15181
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505706628120577e-5
allele num: 66414
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.518e1

MQRankSum
type: SiteQuality
SIO_000300: -3.366e0

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.46e-1

FS
type: SiteQuality
SIO_000300: 3.341e0

QD
type: SiteQuality
SIO_000300: 1.135e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e0

DP
type: SiteQuality
SIO_000300: 2.510346e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.236e0

GenotypeDepth
all individuals: 14424
bin: 2.75e1
variant carriers: 1008

GenotypeDepth
all individuals: 2052
bin: 6.25e1
variant carriers: 1727

GenotypeDepth
all individuals: 396
bin: 9.25e1
variant carriers: 328

GenotypeDepth
all individuals: 894
bin: 7.75e1
variant carriers: 757

GenotypeDepth
all individuals: 1454
bin: 6.75e1
variant carriers: 1232

GenotypeDepth
all individuals: 506
bin: 1.75e1
variant carriers: 191

GenotypeDepth
all individuals: 3872
bin: 4.75e1
variant carriers: 2669

GenotypeQuality
all individuals: 1162
bin: 9.25e1
variant carriers: 83

GenotypeQuality
all individuals: 537
bin: 2.25e1
variant carriers: 9

GenotypeQuality
all individuals: 134
bin: 4.75e1
variant carriers: 29

GenotypeQuality
all individuals: 105
bin: 4.25e1
variant carriers: 13

GenotypeQuality
all individuals: 1750
bin: 8.25e1
variant carriers: 63

GenotypeQuality
all individuals: 158
bin: 5.25e1
variant carriers: 27

GenotypeQuality
all individuals: 59
bin: 7.5e0
variant carriers: 11

GenotypeQuality
all individuals: 57
bin: 2.5e0
variant carriers: 4

GenotypeQuality
all individuals: 135
bin: 5.75e1
variant carriers: 20

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 10

GenotypeQuality
all individuals: 213
bin: 2.75e1
variant carriers: 11

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 6

GenotypeQuality
all individuals: 203
bin: 3.75e1
variant carriers: 14

GenotypeQuality
all individuals: 16202
bin: 6.25e1
variant carriers: 44

GenotypeQuality
all individuals: 281
bin: 3.25e1
variant carriers: 14

GenotypeQuality
all individuals: 29082
bin: 9.75e1
variant carriers: 23364

GenotypeQuality
all individuals: 2486
bin: 7.75e1
variant carriers: 72

GenotypeQuality
all individuals: 947
bin: 8.75e1
variant carriers: 54

GenotypeQuality
all individuals: 5160
bin: 6.75e1
variant carriers: 52

GenotypeQuality
all individuals: 1971
bin: 7.25e1
variant carriers: 49

East Asian
type: Population
allele count: 4224
allele frequency: 4.908203578898443e-1
allele num: 8606
num of homozygotes: 1035

Other
type: Population
allele count: 186
allele frequency: 2.052980132450331e-1
allele num: 906
num of homozygotes: 21

African
type: Population
allele count: 1174
allele frequency: 1.132985910055974e-1
allele num: 10362
num of homozygotes: 82

European (Finnish)
type: Population
allele count: 1128
allele frequency: 1.716372489348752e-1
allele num: 6572
num of homozygotes: 100

Latino
type: Population
allele count: 4075
allele frequency: 3.578328064629435e-1
allele num: 11388
num of homozygotes: 771

South Asian
type: Population
allele count: 3756
allele frequency: 2.283838015322875e-1
allele num: 16446
num of homozygotes: 458

European (Non-Finnish)
type: Population
allele count: 13053
allele frequency: 1.968481375358166e-1
allele num: 66310
num of homozygotes: 1228

DP
type: SiteQuality
SIO_000300: 2.858652e6

VQSLOD
type: SiteQuality
SIO_000300: 2.88e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

MQ
type: SiteQuality
SIO_000300: 5.92e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.96e-2

QD
type: SiteQuality
SIO_000300: 1.85e1

GenotypeDepth
all individuals: 107
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 285
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 185
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4887
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7757
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2810
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1009
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1769
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3909
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24389
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1411
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1527
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2978
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10282
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 307
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.111722283339445e-5
allele num: 16362
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65976
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 1.082e0

MQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.538e0

QD
type: SiteQuality
SIO_000300: 9.76e0

DP
type: SiteQuality
SIO_000300: 2.2396e6

VQSLOD
type: SiteQuality
SIO_000300: 5.39e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.2e-2

GenotypeDepth
all individuals: 130
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 284
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 525
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 220
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2105
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7017
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1911
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2845
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21187
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2787
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1756
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1078
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1813
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10275
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 542
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1400
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3823
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521884702014975e-5
allele num: 65708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.279999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -1.292e0

MQ
type: SiteQuality
SIO_000300: 5.895e1

FS
type: SiteQuality
SIO_000300: 5.628e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.175e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 8.84e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.16e-1

DP
type: SiteQuality
SIO_000300: 2.178538e6

GenotypeDepth
all individuals: 10182
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 185
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 393
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 284
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10275
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2845
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1813
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2105
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1400
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21187
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1078
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3823
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1911
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7017
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2787
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1756
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.128953174797744e-5
allele num: 16316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65708
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.175e0

MQRankSum
type: SiteQuality
SIO_000300: 2.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.84e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.292e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 5.628e0

MQ
type: SiteQuality
SIO_000300: 5.895e1

DP
type: SiteQuality
SIO_000300: 2.178538e6

QD
type: SiteQuality
SIO_000300: 9.279999999999999e0

GenotypeDepth
all individuals: 185
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17814
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 392
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4555
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2242
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1136
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2248
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19653
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1397
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10271
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2793
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6598
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3781
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2774
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1199
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1000
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1752
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2237
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.85112409275978e-5
allele num: 11298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65666
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.155438e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.68e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.68e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.293e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.538e0

MQ
type: SiteQuality
SIO_000300: 6.093e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.91e-1

GenotypeDepth
all individuals: 220
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 392
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2429
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3055
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2744
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1919
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10269
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2373
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1751
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1374
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3735
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1393
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1473
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2723
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6206
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2710
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17332
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11276
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.139489194499017e-5
allele num: 16288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.48e-2

DP
type: SiteQuality
SIO_000300: 2.116122e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

FS
type: SiteQuality
SIO_000300: 3.716e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.69e-1

QD
type: SiteQuality
SIO_000300: 8.699999999999999e0

MQ
type: SiteQuality
SIO_000300: 5.919e1

MQRankSum
type: SiteQuality
SIO_000300: 7.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.886e0

GenotypeDepth
all individuals: 1869
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8755
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2429
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 524
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5717
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3580
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2311
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2733
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2955
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1728
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2653
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1390
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1478
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1748
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3664
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2963
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1998
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13759
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1172
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10263
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16252
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11256
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531440472908818e-5
allele num: 65298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8360
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.928e1

DP
type: SiteQuality
SIO_000300: 2.088217e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.708e0

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.01e-1

QD
type: SiteQuality
SIO_000300: 1.317e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.02e-1

GenotypeDepth
all individuals: 2429
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 185
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3655
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2333
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2934
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3583
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14283
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1658
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2955
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2650
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1485
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5706
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10259
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2003
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1749
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2736
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1392
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16262
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 7.183908045977011e-4
allele num: 8352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11256
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.086844e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.219e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.4e-2

MQ
type: SiteQuality
SIO_000300: 5.945e1

QD
type: SiteQuality
SIO_000300: 1.215e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

GenotypeDepth
all individuals: 12170
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 743
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 391
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3615
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2617
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13101
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2012
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3637
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2294
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2731
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1392
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1751
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3034
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3741
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1524
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5617
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10256
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2205
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.532801961986511e-5
allele num: 65240
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11228
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8328
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.96e1

MQRankSum
type: SiteQuality
SIO_000300: -1.434e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.47e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.571e0

QD
type: SiteQuality
SIO_000300: 1.899e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.25e-1

DP
type: SiteQuality
SIO_000300: 2.071691e6

GenotypeDepth
all individuals: 185
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 524
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 742
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1544
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3125
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3560
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1392
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4280
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2167
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2590
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11170
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10253
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1754
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5553
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2293
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2722
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3809
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3091
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16214
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.787949222242088e-4
allele num: 11186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8298
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65094
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.181e0

MQRankSum
type: SiteQuality
SIO_000300: -2.81e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.09e-1

QD
type: SiteQuality
SIO_000300: 1.445e1

DP
type: SiteQuality
SIO_000300: 2.062383e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.53e-1

GenotypeDepth
all individuals: 742
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1862
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 524
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2429
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4358
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2600
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5461
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3901
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3598
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3095
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10253
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2310
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10022
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1541
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1390
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2732
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2096
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3818
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1757
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537751806858373e-5
allele num: 65030
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQRankSum
type: SiteQuality
SIO_000300: -1.528e0

DP
type: SiteQuality
SIO_000300: 2.059214e6

VQSLOD
type: SiteQuality
SIO_000300: -7.905e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.467e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.387e0

MQ
type: SiteQuality
SIO_000300: 5.92e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.528e0

GenotypeDepth
all individuals: 109
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1695
bin: 9.75e1
variant carriers: 14

GenotypeDepth
all individuals: 356
bin: 6.25e1
variant carriers: 3

GenotypeDepth
all individuals: 223
bin: 6.75e1
variant carriers: 5

GenotypeQuality
all individuals: 197
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2799
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 790
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6863
bin: 9.75e1
variant carriers: 129

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8886
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34436
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1165
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1798
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2390
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 5
allele frequency: 4.867601246105919e-4
allele num: 10272
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.739432944859976e-4
allele num: 11498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 19
allele frequency: 2.881407340006066e-3
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 102
allele frequency: 1.532958610117527e-3
allele num: 66538
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.223e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQ
type: SiteQuality
SIO_000300: 5.963e1

MQRankSum
type: SiteQuality
SIO_000300: 1.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.306e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.08e-1

DP
type: SiteQuality
SIO_000300: 2.009177e6

GenotypeDepth
all individuals: 171
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 804
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6752
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 162
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2389
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8913
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2777
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35063
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1792
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502674761074713e-5
allele num: 66548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

QD
type: SiteQuality
SIO_000300: 1.284e1

DP
type: SiteQuality
SIO_000300: 2.009295e6

MQRankSum
type: SiteQuality
SIO_000300: 7.75e-1

MQ
type: SiteQuality
SIO_000300: 6.029e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.38e-1

FS
type: SiteQuality
SIO_000300: 5.746e0

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

GenotypeDepth
all individuals: 353
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11977
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3662
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1286
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8913
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2389
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1792
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2777
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35063
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6752
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66548
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

MQ
type: SiteQuality
SIO_000300: 6.029e1

QD
type: SiteQuality
SIO_000300: 1.284e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

FS
type: SiteQuality
SIO_000300: 5.746e0

MQRankSum
type: SiteQuality
SIO_000300: 7.75e-1

DP
type: SiteQuality
SIO_000300: 2.009295e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-2

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25749
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1918
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1782
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6749
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2384
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35663
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8956
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2776
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.697439875872769e-5
allele num: 10312
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.45e-1

DP
type: SiteQuality
SIO_000300: 2.014203e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.224e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-2

FS
type: SiteQuality
SIO_000300: 5.262e0

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

MQ
type: SiteQuality
SIO_000300: 5.049e1

QD
type: SiteQuality
SIO_000300: 1.183e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.74e-1

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 171
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 142
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8956
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6749
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2776
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1782
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35663
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2384
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.697439875872769e-5
allele num: 10312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.74e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.224e0

DP
type: SiteQuality
SIO_000300: 2.014203e6

QD
type: SiteQuality
SIO_000300: 1.183e1

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.45e-1

FS
type: SiteQuality
SIO_000300: 5.262e0

MQ
type: SiteQuality
SIO_000300: 5.049e1

GenotypeDepth
all individuals: 1687
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1283
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1917
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2776
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1784
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2386
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35761
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8958
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6748
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66608
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.131e0

VQSLOD
type: SiteQuality
SIO_000300: -2.454e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

FS
type: SiteQuality
SIO_000300: 6.34e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.743e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.96e-1

DP
type: SiteQuality
SIO_000300: 2.014955e6

QD
type: SiteQuality
SIO_000300: 1.395e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.34e-1

GenotypeDepth
all individuals: 171
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1285
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 219
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2780
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35841
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2386
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6748
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1782
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8975
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50105073551486e-5
allele num: 66620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.58e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.016227e6

VQSLOD
type: SiteQuality
SIO_000300: -9.48e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.787e0

MQRankSum
type: SiteQuality
SIO_000300: 1.21e-1

FS
type: SiteQuality
SIO_000300: 7.679e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.0e-1

GenotypeDepth
all individuals: 146
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1917
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35870
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2387
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1166
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8974
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1784
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6748
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2782
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.645061728395061e-5
allele num: 10368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.902e-1

QD
type: SiteQuality
SIO_000300: 1.309e1

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.293e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 2.71e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.308e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.32e0

MQRankSum
type: SiteQuality
SIO_000300: -1.035e0

DP
type: SiteQuality
SIO_000300: 2.016416e6

GenotypeDepth
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11659
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 494
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11991
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 219
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 171
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8979
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2780
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1166
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1784
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35899
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6748
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2386
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817741153659719e-4
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e0

DP
type: SiteQuality
SIO_000300: 2.016967e6

MQ
type: SiteQuality
SIO_000300: 6.037e1

VQSLOD
type: SiteQuality
SIO_000300: 2.67e0

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.5e-1

QD
type: SiteQuality
SIO_000300: 1.357e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.86e-1

GenotypeDepth
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 802
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1287
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1688
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 219
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 171
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35904
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8979
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2778
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6746
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2385
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1786
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.92789666473877e-4
allele num: 10374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e-1

FS
type: SiteQuality
SIO_000300: 1.2769e1

MQ
type: SiteQuality
SIO_000300: 5.984e1

DP
type: SiteQuality
SIO_000300: 2.01688e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.022e0

VQSLOD
type: SiteQuality
SIO_000300: -1.523e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.341e1

MQRankSum
type: SiteQuality
SIO_000300: 4.27e-1

GenotypeDepth
all individuals: 3651
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 802
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2778
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35891
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8984
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2384
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1788
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6745
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 785
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500690317546071e-5
allele num: 66636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.38e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.689e0

FS
type: SiteQuality
SIO_000300: 8.46e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.11e-1

DP
type: SiteQuality
SIO_000300: 2.017094e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.87e-1

QD
type: SiteQuality
SIO_000300: 1.269e1

GenotypeDepth
all individuals: 104
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 493
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 171
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1689
bin: 9.75e1
variant carriers: 3

GenotypeDepth
all individuals: 145
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2384
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35916
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8988
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1787
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6751
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 2776
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.650313559576319e-4
allele num: 66654
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.74e0

DP
type: SiteQuality
SIO_000300: 2.018117e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.05e-1

QD
type: SiteQuality
SIO_000300: 1.205e1

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

VQSLOD
type: SiteQuality
SIO_000300: 3.04e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

GenotypeDepth
all individuals: 1686
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 145
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 104
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12000
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3650
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 219
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8981
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2772
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2381
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35782
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1785
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6740
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.282e1

MQRankSum
type: SiteQuality
SIO_000300: 4.54e-1

DP
type: SiteQuality
SIO_000300: 2.016673e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.018e0

FS
type: SiteQuality
SIO_000300: 4.832e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

VQSLOD
type: SiteQuality
SIO_000300: 8.27e-1

GenotypeDepth
all individuals: 145
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 493
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 354
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 803
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1686
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8984
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2772
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2381
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6740
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1784
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35805
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.682062858135092e-5
allele num: 11518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.111e0

QD
type: SiteQuality
SIO_000300: 1.303e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.54e-1

DP
type: SiteQuality
SIO_000300: 2.016692e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.295e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

GenotypeDepth
all individuals: 105
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 121
bin: 9.25e1
variant carriers: 2

GenotypeDepth
all individuals: 804
bin: 5.25e1
variant carriers: 2

GenotypeDepth
all individuals: 354
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 12001
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 170
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1779
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2375
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1164
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35606
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8957
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2762
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6752
bin: 9.75e1
variant carriers: 28

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.508295263284443e-5
allele num: 66544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 25
allele frequency: 1.516438189979376e-3
allele num: 16486
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.015762e6

VQSLOD
type: SiteQuality
SIO_000300: 2.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -6.2e-2

QD
type: SiteQuality
SIO_000300: 1.27e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.92e-1

FS
type: SiteQuality
SIO_000300: 5.590000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeDepth
all individuals: 25903
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 354
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12001
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 105
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 171
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 35606
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8957
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6752
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 49
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2375
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1779
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1164
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2762
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502765087761481e-5
allele num: 66544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 5.590000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.92e-1

QD
type: SiteQuality
SIO_000300: 1.27e1

VQSLOD
type: SiteQuality
SIO_000300: 2.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.45e-1

DP
type: SiteQuality
SIO_000300: 2.015762e6

MQRankSum
type: SiteQuality
SIO_000300: -6.2e-2

GenotypeDepth
all individuals: 1912
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 145
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1686
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 171
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8954
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2376
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1165
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6727
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35581
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2764
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1778
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.1e0

FS
type: SiteQuality
SIO_000300: 1.5449e1

MQRankSum
type: SiteQuality
SIO_000300: 4.54e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.326e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

VQSLOD
type: SiteQuality
SIO_000300: -2.017e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.77e-1

DP
type: SiteQuality
SIO_000300: 2.014071e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeDepth
all individuals: 146
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1285
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 146
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1912
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 104
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 218
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35225
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6725
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1164
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 779
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2747
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1777
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2357
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8862
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66402
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.278e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.12e-1

FS
type: SiteQuality
SIO_000300: 9.428000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 9.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.008695e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e0

QD
type: SiteQuality
SIO_000300: 1.71e1

GenotypeDepth
all individuals: 11979
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 218
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 802
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1284
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 171
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 104
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6723
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35139
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2355
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8853
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1775
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2743
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1164
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160631383472609e-4
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.062e0

DP
type: SiteQuality
SIO_000300: 2.007993e6

MQRankSum
type: SiteQuality
SIO_000300: -5.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.455e0

QD
type: SiteQuality
SIO_000300: 1.496e1

GenotypeDepth
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 11952
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3656
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 801
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 171
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1686
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10814
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 353
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 35015
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2352
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2735
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1770
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1163
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8843
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6723
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507249871883761e-5
allele num: 66346
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.2e0

MQRankSum
type: SiteQuality
SIO_000300: 3.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

VQSLOD
type: SiteQuality
SIO_000300: -1.399e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.006226e6

FS
type: SiteQuality
SIO_000300: 3.221e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.44e-1

GenotypeDepth
all individuals: 1915
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3643
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1283
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1686
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 218
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 353
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10664
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2342
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34745
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8824
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 775
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2728
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6725
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 181
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1766
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508341126429153e-5
allele num: 66298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.087168249330411e-5
allele num: 16428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.39e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.014e-1

DP
type: SiteQuality
SIO_000300: 2.00259e6

QD
type: SiteQuality
SIO_000300: 1.308e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.83e-1

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1686
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 801
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 145
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 773
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2316
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6720
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 33920
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8686
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1757
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1265
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2708
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66108
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.099048548426445e-5
allele num: 16396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.18e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 9.15e0

FS
type: SiteQuality
SIO_000300: 4.542e0

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

QD
type: SiteQuality
SIO_000300: 1.506e1

DP
type: SiteQuality
SIO_000300: 1.990942e6

GenotypeDepth
all individuals: 1284
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 353
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 802
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1157
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2309
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8646
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33610
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1445
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2682
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6719
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66016
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.101281269066504e-5
allele num: 16390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.465e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

FS
type: SiteQuality
SIO_000300: 3.185e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e-1

QD
type: SiteQuality
SIO_000300: 1.243e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.18e-1

DP
type: SiteQuality
SIO_000300: 1.986454e6

GenotypeDepth
all individuals: 1276
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 492
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 145
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2069
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 725
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2782
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2112
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17178
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2255
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5119
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5248
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5204
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6694
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5095
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1584
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1634
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.544974198930878e-5
allele num: 64726
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10210
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e0

QD
type: SiteQuality
SIO_000300: 1.383e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.415e0

MQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.488e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

VQSLOD
type: SiteQuality
SIO_000300: -2.099e-1

DP
type: SiteQuality
SIO_000300: 1.745191e6

GenotypeDepth
all individuals: 1686
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 104
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2954
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 145
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5745
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4538
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3109
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5635
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2852
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6441
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 695
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3772
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3381
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1448
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9428
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6694
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1107
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1564
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1979
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10102
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11054
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16040
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.573168045810653e-5
allele num: 63566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8124
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.191e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.356e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e0

DP
type: SiteQuality
SIO_000300: 1.680363e6

QD
type: SiteQuality
SIO_000300: 6.21e0

GenotypeDepth
all individuals: 107
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2025
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 492
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 145
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3343
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5347
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2286
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6261
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3451
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3782
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2818
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1982
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1108
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6471
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1564
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5655
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5209
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6696
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10920
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15982
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62752
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8034
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6424
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.992817238627295e-4
allele num: 10024
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.93e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.76e0

QD
type: SiteQuality
SIO_000300: 1.823e1

DP
type: SiteQuality
SIO_000300: 1.671387e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 6983
bin: 2.25e1
variant carriers: 3

GenotypeDepth
all individuals: 9692
bin: 3.25e1
variant carriers: 2

GenotypeDepth
all individuals: 5682
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1099
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 352
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 538
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4724
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 987
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3406
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2388
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 900
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26758
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 2043
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3864
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8538
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4087
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66016
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

South Asian
type: Population
allele count: 12
allele frequency: 7.285974499089253e-4
allele num: 16470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.923e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.01e-1

DP
type: SiteQuality
SIO_000300: 2.746541e6

QD
type: SiteQuality
SIO_000300: 9.710000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

FS
type: SiteQuality
SIO_000300: 5.9e0

MQ
type: SiteQuality
SIO_000300: 5.93e1

GenotypeDepth
all individuals: 810
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 438
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9692
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3442
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 9407
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 352
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3406
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2388
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 900
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 987
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3864
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8538
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4724
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4087
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2043
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26758
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 161
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.029568589432865e-5
allele num: 66016
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

FS
type: SiteQuality
SIO_000300: 5.9e0

MQRankSum
type: SiteQuality
SIO_000300: 3.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

DP
type: SiteQuality
SIO_000300: 2.746541e6