16-67574435-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574435
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574435
    reference: chr 16
allele count: 22
allele frequency: 1.81240011203928e-4
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.735+31G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.564+31G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.675+31G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.439+31G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.314G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.466+31G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.687+31G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*47+31G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.735+31G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.327G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.56-20G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.675+31G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.717+31G>A
  variant of: http://identifiers.org/hgnc/25836
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5339
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6699
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

16-67574436-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574436
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574436
    reference: chr 16
allele count: 17
allele frequency: 1.400467921046562e-4
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.328G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.315G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.564+32G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.56-19G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.717+32G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.735+32G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.675+32G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.687+32G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.466+32G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*47+32G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.735+32G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.675+32G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.439+32G>C
  variant of: http://identifiers.org/hgnc/25836
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6481
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4836
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6695
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5535
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6630
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-67574441-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574441
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574441
    reference: chr 16
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.735+37G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.675+37G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.717+37G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.320G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.675+37G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.56-14G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.564+37G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.466+37G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.439+37G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.687+37G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.333G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.735+37G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*47+37G>T
  variant of: http://identifiers.org/hgnc/25836
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5340
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6696
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6630
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/16-67574443-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574443
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574443
    reference: chr 16
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.322C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.735+39C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.335C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*47+39C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.675+39C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.735+39C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.439+39C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.675+39C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.56-12C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.564+39C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.466+39C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.717+39C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.687+39C>A
  variant of: http://identifiers.org/hgnc/25836
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6632
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6459
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6699
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4839
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

16-67574447-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574447
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574447
    reference: chr 16
allele count: 8
allele frequency: 6.590871642774756e-5
allele num: 121380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.440-35A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.565-35A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.339A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.326A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.676-35A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.56-8A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.736-35A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.736-35A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.718-35A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*48-35A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.688-35A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.676-35A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.467-35A>G
  variant of: http://identifiers.org/hgnc/25836
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6456
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1561
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6698
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.56-8A>G
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

16-67574449-ACCTAGGCTG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574449
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574440
    reference: chr 16
allele count: 2
allele frequency: 1.64774506088418e-5
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.332_340delAGGCTGCCT
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.56-2_62delAGGCTGCCT
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.345_353delAGGCTGCCT
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
canonical: false
consequence: splice acceptor
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1561
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5341
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4836
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6697
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7135
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.56-2_62delAGGCTGCCT
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: ACCTAGGCTG
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

16-67574468-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574468
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574468
    reference: chr 16
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.69A>G
  hgvsp: ENSP00000455200.1:p.Tyr24Cys
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.347A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.676-14A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.718-14A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.736-14A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.565-14A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.360A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.440-14A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.467-14A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.676-14A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*48-14A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.736-14A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.688-14A>G
  variant of: http://identifiers.org/hgnc/25836
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4128
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5343
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4814
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr24Cys
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

16-67574469-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574469
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574469
    reference: chr 16
allele count: 1
allele frequency: 8.241441263248117e-6
allele num: 121338
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.361C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.736-13C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.565-13C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.70C>T
  hgvsp: ENST00000569179.1:c.70C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.688-13C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.440-13C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*48-13C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.718-13C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.348C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.736-13C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.676-13C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.676-13C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.467-13C>T
  variant of: http://identifiers.org/hgnc/25836
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6396
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5343
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4159
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr24Tyr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

16-67574476-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574476
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574476
    reference: chr 16
allele count: 1
allele frequency: 8.241984669908513e-6
allele num: 121330
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.676-6C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.467-6C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.355C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*48-6C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.736-6C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.688-6C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.368C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.736-6C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.565-6C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.77C>T
  hgvsp: ENSP00000455200.1:p.Pro27Ser
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.440-6C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.718-6C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.676-6C>T
  variant of: http://identifiers.org/hgnc/25836
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro27Ser
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff

16-67574496-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574496
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574496
    reference: chr 16
allele count: 1
allele frequency: 8.246742536698004e-6
allele num: 121260
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.750T>C
  hgvsp: ENST00000422602.2:c.750T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.579T>C
  hgvsp: ENST00000569253.1:c.579T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.750T>C
  hgvsp: ENST00000540839.3:c.750T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.690T>C
  hgvsp: ENST00000566559.1:c.690T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*62T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.702T>C
  hgvsp: ENST00000379312.3:c.702T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.454T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.690T>C
  hgvsp: ENST00000042381.4:c.690T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.375T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.97T>C
  hgvsp: ENST00000569179.1:c.97T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.732T>C
  hgvsp: ENST00000428437.2:c.732T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.388T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.481T>C
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6700
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr250Tyr
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

16-67574501-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574501
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574501
    reference: chr 16
allele count: 1
allele frequency: 8.24905548314718e-6
allele num: 121226
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.695G>A
  hgvsp: ENSP00000042381.4:p.Arg232His
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.380G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.737G>A
  hgvsp: ENSP00000389456.2:p.Arg246His
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.755G>A
  hgvsp: ENSP00000443568.3:p.Arg252His
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.755G>A
  hgvsp: ENSP00000400099.2:p.Arg252His
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.584G>A
  hgvsp: ENSP00000454376.1:p.Arg195His
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.486G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.102G>A
  hgvsp: ENSP00000455200.1:p.Arg35His
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.459G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.695G>A
  hgvsp: ENSP00000456893.1:p.Arg232His
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.707G>A
  hgvsp: ENSP00000368614.3:p.Arg236His
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.393G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*67G>A
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5324
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6249
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7141
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg252His
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

16-67574506-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574506
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574506
    reference: chr 16
allele count: 4
allele frequency: 3.300384494793644e-5
allele num: 121198
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.398C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.742C>T
  hgvsp: ENSP00000389456.2:p.Arg248Cys
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.712C>T
  hgvsp: ENSP00000368614.3:p.Arg238Cys
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.491C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.589C>T
  hgvsp: ENSP00000454376.1:p.Arg197Cys
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.107C>T
  hgvsp: ENSP00000455200.1:p.Arg37Cys
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.385C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.760C>T
  hgvsp: ENSP00000443568.3:p.Arg254Cys
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.760C>T
  hgvsp: ENSP00000400099.2:p.Arg254Cys
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.464C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*72C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.700C>T
  hgvsp: ENSP00000456893.1:p.Arg234Cys
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.700C>T
  hgvsp: ENSP00000042381.4:p.Arg234Cys
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6700
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4762
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7141
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6634
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg254Cys
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

16-67574518-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574518
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574518
    reference: chr 16
allele count: 2
allele frequency: 1.651500388102591e-5
allele num: 121102
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.754C>T
  hgvsp: ENSP00000389456.2:p.Arg252Trp
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.772C>T
  hgvsp: ENSP00000443568.3:p.Arg258Trp
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.712C>T
  hgvsp: ENSP00000456893.1:p.Arg238Trp
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.724C>T
  hgvsp: ENSP00000368614.3:p.Arg242Trp
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*84C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.503C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.772C>T
  hgvsp: ENSP00000400099.2:p.Arg258Trp
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.119C>T
  hgvsp: ENSP00000455200.1:p.Arg41Trp
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.397C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.476C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.410C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.712C>T
  hgvsp: ENSP00000042381.4:p.Arg238Trp
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.601C>T
  hgvsp: ENSP00000454376.1:p.Arg201Trp
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4199
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4736
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6700
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7141
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg258Trp
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

16-67574524-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574524
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574524
    reference: chr 16
allele count: 2
allele frequency: 1.652674026574998e-5
allele num: 121016
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.718C>T
  hgvsp: ENSP00000042381.4:p.Arg240Ter
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.718C>T
  hgvsp: ENSP00000456893.1:p.Arg240Ter
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.509C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.403C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.778C>T
  hgvsp: ENSP00000400099.2:p.Arg260Ter
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.482C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.778C>T
  hgvsp: ENSP00000443568.3:p.Arg260Ter
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.760C>T
  hgvsp: ENSP00000389456.2:p.Arg254Ter
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.730C>T
  hgvsp: ENSP00000368614.3:p.Arg244Ter
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.125C>T
  hgvsp: ENSP00000455200.1:p.Arg43Ter
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*90C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.607C>T
  hgvsp: ENSP00000454376.1:p.Arg203Ter
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.416C>T
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5318
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6074
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6696
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg260Ter
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

16-67574525-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574525
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574525
    reference: chr 16
allele count: 3
allele frequency: 2.479256884069948e-5
allele num: 121004
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.719G>A
  hgvsp: ENSP00000042381.4:p.Arg240Gln
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.779G>A
  hgvsp: ENSP00000400099.2:p.Arg260Gln
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.126G>A
  hgvsp: ENSP00000455200.1:p.Arg43Gln
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.510G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.719G>A
  hgvsp: ENSP00000456893.1:p.Arg240Gln
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*91G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.779G>A
  hgvsp: ENSP00000443568.3:p.Arg260Gln
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.761G>A
  hgvsp: ENSP00000389456.2:p.Arg254Gln
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.404G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.483G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.731G>A
  hgvsp: ENSP00000368614.3:p.Arg244Gln
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.608G>A
  hgvsp: ENSP00000454376.1:p.Arg203Gln
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.417G>A
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6695
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5316
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg260Gln
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

16-67574534-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574534
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574534
    reference: chr 16
allele count: 1
allele frequency: 8.276364358664525e-6
allele num: 120826
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.413G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.728G>A
  hgvsp: ENSP00000456893.1:p.Gly243Asp
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.788G>A
  hgvsp: ENSP00000400099.2:p.Gly263Asp
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.617G>A
  hgvsp: ENSP00000454376.1:p.Gly206Asp
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.492G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.426G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*100G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.788G>A
  hgvsp: ENSP00000443568.3:p.Gly263Asp
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.740G>A
  hgvsp: ENSP00000368614.3:p.Gly247Asp
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.728G>A
  hgvsp: ENSP00000042381.4:p.Gly243Asp
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.135G>A
  hgvsp: ENSP00000455200.1:p.Gly46Asp
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.770G>A
  hgvsp: ENSP00000389456.2:p.Gly257Asp
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.519G>A
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5538
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5963
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly263Asp
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-67574549-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574549
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574549
    reference: chr 16
allele count: 1
allele frequency: 8.320575118152166e-6
allele num: 120184
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.632T>C
  hgvsp: ENSP00000454376.1:p.Val211Ala
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.785T>C
  hgvsp: ENSP00000389456.2:p.Val262Ala
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.803T>C
  hgvsp: ENSP00000400099.2:p.Val268Ala
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.755T>C
  hgvsp: ENSP00000368614.3:p.Val252Ala
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.803T>C
  hgvsp: ENSP00000443568.3:p.Val268Ala
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.150T>C
  hgvsp: ENSP00000455200.1:p.Val51Ala
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.441T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.743T>C
  hgvsp: ENSP00000456893.1:p.Val248Ala
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.534T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.428T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.507T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.743T>C
  hgvsp: ENSP00000042381.4:p.Val248Ala
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*115T>C
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6696
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4621
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7141
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val268Ala
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-67574556-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574556
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574556
    reference: chr 16
allele count: 1
allele frequency: 8.344459279038718e-6
allele num: 119840
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.448C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.514C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.750C>G
  hgvsp: ENSP00000042381.4:p.Asp250Glu
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.541C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.639C>G
  hgvsp: ENSP00000454376.1:p.Asp213Glu
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.157C>G
  hgvsp: ENSP00000455200.1:p.Asp53Glu
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.810C>G
  hgvsp: ENSP00000400099.2:p.Asp270Glu
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.750C>G
  hgvsp: ENSP00000456893.1:p.Asp250Glu
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.792C>G
  hgvsp: ENSP00000389456.2:p.Asp264Glu
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*122C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.762C>G
  hgvsp: ENSP00000368614.3:p.Asp254Glu
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.810C>G
  hgvsp: ENSP00000443568.3:p.Asp270Glu
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.435C>G
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4553
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6696
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5322
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5538
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp270Glu
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

16-67574566-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574566
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574566
    reference: chr 16
allele count: 1
allele frequency: 8.400961069946402e-6
allele num: 119034
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.760A>G
  hgvsp: ENSP00000042381.4:p.Thr254Ala
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.772A>G
  hgvsp: ENSP00000368614.3:p.Thr258Ala
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*132A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.820A>G
  hgvsp: ENSP00000443568.3:p.Thr274Ala
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.167A>G
  hgvsp: ENSP00000455200.1:p.Thr57Ala
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.802A>G
  hgvsp: ENSP00000389456.2:p.Thr268Ala
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.524A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.551A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.820A>G
  hgvsp: ENSP00000400099.2:p.Thr274Ala
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.445A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.760A>G
  hgvsp: ENSP00000456893.1:p.Thr254Ala
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.649A>G
  hgvsp: ENSP00000454376.1:p.Thr217Ala
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.458A>G
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5538
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4496
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5298
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Thr274Ala
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD

16-67574577-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574577
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574577
    reference: chr 16
allele count: 1
allele frequency: 8.511217785040683e-6
allele num: 117492
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.783C>G
  hgvsp: ENST00000379312.3:c.783C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.813C>G
  hgvsp: ENST00000428437.2:c.813C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.178C>G
  hgvsp: ENST00000569179.1:c.178C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.831C>G
  hgvsp: ENST00000422602.2:c.831C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.456C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.771C>G
  hgvsp: ENST00000042381.4:c.771C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.469C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.660C>G
  hgvsp: ENST00000569253.1:c.660C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*143C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.771C>G
  hgvsp: ENST00000566559.1:c.771C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.831C>G
  hgvsp: ENST00000540839.3:c.831C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.562C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.535C>G
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5538
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4337
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1731
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu277Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

16-67574578-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574578
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574578
    reference: chr 16
allele count: 2
allele frequency: 1.707417019532851e-5
allele num: 117136
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.661C>T
  hgvsp: ENSP00000454376.1:p.Pro221Ser
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*144C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.784C>T
  hgvsp: ENSP00000368614.3:p.Pro262Ser
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.772C>T
  hgvsp: ENSP00000456893.1:p.Pro258Ser
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.814C>T
  hgvsp: ENSP00000389456.2:p.Pro272Ser
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.536C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.179C>T
  hgvsp: ENSP00000455200.1:p.Pro61Ser
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.457C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.772C>T
  hgvsp: ENSP00000042381.4:p.Pro258Ser
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.832C>T
  hgvsp: ENSP00000400099.2:p.Pro278Ser
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.563C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.832C>T
  hgvsp: ENSP00000443568.3:p.Pro278Ser
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.470C>T
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5538
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5289
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7140
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro278Ser
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum

16-67574584-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574584
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574584
    reference: chr 16
allele count: 1
allele frequency: 8.591803419537761e-6
allele num: 116390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.778C>G
  hgvsp: ENSP00000456893.1:p.Leu260Val
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.790C>G
  hgvsp: ENSP00000368614.3:p.Leu264Val
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.838C>G
  hgvsp: ENSP00000400099.2:p.Leu280Val
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.838C>G
  hgvsp: ENSP00000443568.3:p.Leu280Val
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.569C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.820C>G
  hgvsp: ENSP00000389456.2:p.Leu274Val
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.463C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.476C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.778C>G
  hgvsp: ENSP00000042381.4:p.Leu260Val
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.185C>G
  hgvsp: ENSP00000455200.1:p.Leu63Val
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.542C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.667C>G
  hgvsp: ENSP00000454376.1:p.Leu223Val
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*150C>G
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2713
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu280Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum

16-67574588-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574588
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574588
    reference: chr 16
allele count: 2
allele frequency: 1.727831916511162e-5
allele num: 115752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*154C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.842C>T
  hgvsp: ENSP00000443568.3:p.Thr281Met
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.782C>T
  hgvsp: ENSP00000042381.4:p.Thr261Met
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.782C>T
  hgvsp: ENSP00000456893.1:p.Thr261Met
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.794C>T
  hgvsp: ENSP00000368614.3:p.Thr265Met
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.189C>T
  hgvsp: ENSP00000455200.1:p.Thr64Met
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.824C>T
  hgvsp: ENSP00000389456.2:p.Thr275Met
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.842C>T
  hgvsp: ENSP00000400099.2:p.Thr281Met
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.546C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.467C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.671C>T
  hgvsp: ENSP00000454376.1:p.Thr224Met
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.573C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.480C>T
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr281Met
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum

16-67574589-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574589
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574589
    reference: chr 16
allele count: 3
allele frequency: 2.594123445687702e-5
allele num: 115646
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.190G>A
  hgvsp: ENST00000569179.1:c.190G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.783G>A
  hgvsp: ENST00000042381.4:c.783G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.672G>A
  hgvsp: ENST00000569253.1:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.843G>A
  hgvsp: ENST00000540839.3:c.843G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.481G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.468G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.843G>A
  hgvsp: ENST00000422602.2:c.843G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*155G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.825G>A
  hgvsp: ENST00000428437.2:c.825G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566522
  gene symbol: FAM65A
  hgvsc: ENST00000566522.1:n.574G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.783G>A
  hgvsp: ENST00000566559.1:c.783G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.795G>A
  hgvsp: ENST00000379312.3:c.795G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.547G>A
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4153
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6632
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr281Thr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

16-67574612-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574612
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574612
    reference: chr 16
allele count: 1
allele frequency: 8.834390515398343e-6
allele num: 113194
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*173+5T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.813+5T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.208+5T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.801+5T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.861+5T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.861+5T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.690+5T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.801+5T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.486+5T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.565+5T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.843+5T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.499+5T>A
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6631
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.861+5T>A
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS

16-67574614-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574614
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574614
    reference: chr 16
allele count: 3
allele frequency: 2.654867256637168e-5
allele num: 113000
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.813+7T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.801+7T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.499+7T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.843+7T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.208+7T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.801+7T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.486+7T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.861+7T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.861+7T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.565+7T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.690+7T>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*173+7T>A
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6631
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.861+7T>A
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

16-67574627-CG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574627
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574626
    reference: chr 16
allele count: 1
allele frequency: 8.962661551974475e-6
allele num: 111574
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.208+22delG
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.499+22delG
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.843+22delG
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.801+22delG
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*173+22delG
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.801+22delG
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.861+22delG
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.813+22delG
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.565+22delG
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.486+22delG
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.690+22delG
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.861+22delG
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 7140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6631
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: CG
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD

16-67574645-CTGTGAACCCCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574645
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574634
    reference: chr 16
allele count: 1
allele frequency: 9.00835975785529e-6
allele num: 111008
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 5288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3021
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6631
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3841
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: CTGTGAACCCCT
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum

16-67574649-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574649
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574649
    reference: chr 16
allele count: 1
allele frequency: 9.011282125220776e-6
allele num: 110972
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.813+42G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.486+42G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.801+42G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*173+42G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.208+42G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.861+42G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.801+42G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.565+42G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.861+42G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.843+42G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.499+42G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.690+42G>A
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6631
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5289
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7140
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

16-67574650-AACCCCTTGTG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574650
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574640
    reference: chr 16
allele count: 1
allele frequency: 9.011606949751279e-6
allele num: 110968
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3039
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5289
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6631
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3340
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3242
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: AACCCCTTGTG
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

16-67574653-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67574653
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67574653
    reference: chr 16
allele count: 6
allele frequency: 5.410572258192508e-5
allele num: 110894
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.565+46C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.486+46C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*173+46C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.861+46C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.843+46C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.813+46C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.208+46C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.801+46C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.499+46C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.801+46C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.690+46C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.861+46C>T
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3394
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5536
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6692
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6631
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4204
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4151
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS

16-67575283-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575283
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575283
    reference: chr 16
allele count: 1
allele frequency: 8.544525522497736e-6
allele num: 117034
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.487-50T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.691-50T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.814-50T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*174-50T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.844-50T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.862-50T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.802-50T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.566-50T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.500-50T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.209-50T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.34T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.862-50T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.802-50T>C
  variant of: http://identifiers.org/hgnc/25836
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10722
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff

16-67575287-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575287
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575287
    reference: chr 16
allele count: 1
allele frequency: 8.540001366400219e-6
allele num: 117096
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.844-46A>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.566-46A>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.862-46A>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.500-46A>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*174-46A>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.38A>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.691-46A>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.802-46A>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.209-46A>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.802-46A>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.862-46A>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.814-46A>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.487-46A>T
  variant of: http://identifiers.org/hgnc/25836
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/16-67575298-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575298
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575298
    reference: chr 16
allele count: 4
allele frequency: 3.403675970047652e-5
allele num: 117520
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.49A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.802-35A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.487-35A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.862-35A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.566-35A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.209-35A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.802-35A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.814-35A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.691-35A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.862-35A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.500-35A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.844-35A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*174-35A>C
  variant of: http://identifiers.org/hgnc/25836
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

16-67575303-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575303
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575303
    reference: chr 16
allele count: 5
allele frequency: 4.245635486719652e-5
allele num: 117768
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.566-30T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*174-30T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.844-30T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.54T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.802-30T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.691-30T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.209-30T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.802-30T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.862-30T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.862-30T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.814-30T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.487-30T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.500-30T>C
  variant of: http://identifiers.org/hgnc/25836
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27009
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11743
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10362
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-67575304-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575304
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575304
    reference: chr 16
allele count: 784
allele frequency: 6.653992395437262e-3
allele num: 117824
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.691-29G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.209-29G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.802-29G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.802-29G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.844-29G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*174-29G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.566-29G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.500-29G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.487-29G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.55G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.862-29G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.862-29G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.814-29G>A
  variant of: http://identifiers.org/hgnc/25836
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 9.75e1
  variant carriers: 723
genotype depth: GenotypeDepth
  all individuals: 11795
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10365
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27023
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 30
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/16-67575308-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575308
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575308
    reference: chr 16
allele count: 4
allele frequency: 3.392820791205809e-5
allele num: 117896
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.59C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.566-25C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.802-25C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.844-25C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.862-25C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.814-25C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.691-25C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.862-25C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.500-25C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.209-25C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.802-25C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.487-25C>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*174-25C>A
  variant of: http://identifiers.org/hgnc/25836
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

16-67575309-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575309
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575309
    reference: chr 16
allele count: 1
allele frequency: 8.471417437565653e-6
allele num: 118044
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.802-24C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.60C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.862-24C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.814-24C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.862-24C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.487-24C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.691-24C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.209-24C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.500-24C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*174-24C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.802-24C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.566-24C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.844-24C>T
  variant of: http://identifiers.org/hgnc/25836
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12307
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

16-67575310-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575310
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575310
    reference: chr 16
allele count: 2
allele frequency: 1.693738249690893e-5
allele num: 118082
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.209-23C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.862-23C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.691-23C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.802-23C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.814-23C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.862-23C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.566-23C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.500-23C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.802-23C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.61C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.844-23C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*174-23C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.487-23C>G
  variant of: http://identifiers.org/hgnc/25836
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27540
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12341
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

16-67575312-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575312
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575312
    reference: chr 16
allele count: 1
allele frequency: 8.454657670910904e-6
allele num: 118278
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.691-21A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.862-21A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.802-21A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.862-21A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.844-21A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.209-21A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*174-21A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.802-21A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.487-21A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.63A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.566-21A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.500-21A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.814-21A>G
  variant of: http://identifiers.org/hgnc/25836
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27556
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12540
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff

16-67575314-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575314
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575314
    reference: chr 16
allele count: 3
allele frequency: 2.533869387479307e-5
allele num: 118396
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*174-19C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.862-19C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.862-19C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.209-19C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.500-19C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.566-19C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.487-19C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.814-19C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.844-19C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.802-19C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.691-19C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.65C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.802-19C>G
  variant of: http://identifiers.org/hgnc/25836
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10540
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

16-67575340-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575340
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575340
    reference: chr 16
allele count: 1
allele frequency: 8.318913882603488e-6
allele num: 120208
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.809A>G
  hgvsp: ENSP00000042381.4:p.Glu270Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.216A>G
  hgvsp: ENSP00000455200.1:p.Glu73Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.821A>G
  hgvsp: ENSP00000368614.3:p.Glu274Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*181A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.851A>G
  hgvsp: ENSP00000389456.2:p.Glu284Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.494A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.573A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.869A>G
  hgvsp: ENSP00000443568.3:p.Glu290Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.869A>G
  hgvsp: ENSP00000400099.2:p.Glu290Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.698A>G
  hgvsp: ENSP00000454376.1:p.Glu233Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.809A>G
  hgvsp: ENSP00000456893.1:p.Glu270Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.507A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.91A>G
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14107
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10633
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu290Gly
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

16-67575342-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575342
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575342
    reference: chr 16
allele count: 1
allele frequency: 8.313795912937929e-6
allele num: 120282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.93C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.871C>G
  hgvsp: ENSP00000443568.3:p.Leu291Val
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.575C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.218C>G
  hgvsp: ENSP00000455200.1:p.Leu74Val
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.871C>G
  hgvsp: ENSP00000400099.2:p.Leu291Val
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.509C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*183C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.811C>G
  hgvsp: ENSP00000456893.1:p.Leu271Val
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.853C>G
  hgvsp: ENSP00000389456.2:p.Leu285Val
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.496C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.700C>G
  hgvsp: ENSP00000454376.1:p.Leu234Val
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.823C>G
  hgvsp: ENSP00000368614.3:p.Leu275Val
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.811C>G
  hgvsp: ENSP00000042381.4:p.Leu271Val
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14137
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10649
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28306
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu291Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff

16-67575344-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575344
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575344
    reference: chr 16
allele count: 4
allele frequency: 3.320383836371484e-5
allele num: 120468
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.873G>A
  hgvsp: ENST00000540839.3:c.873G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.702G>A
  hgvsp: ENST00000569253.1:c.702G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.577G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.220G>A
  hgvsp: ENST00000569179.1:c.220G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.813G>A
  hgvsp: ENST00000042381.4:c.813G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*185G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.813G>A
  hgvsp: ENST00000566559.1:c.813G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.511G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.855G>A
  hgvsp: ENST00000428437.2:c.855G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.498G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.873G>A
  hgvsp: ENST00000422602.2:c.873G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.825G>A
  hgvsp: ENST00000379312.3:c.825G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.95G>A
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28345
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu291Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

16-67575354-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575354
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575354
    reference: chr 16
allele count: 1
allele frequency: 8.27034090345204e-6
allele num: 120914
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.883G>A
  hgvsp: ENSP00000443568.3:p.Ala295Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.823G>A
  hgvsp: ENSP00000456893.1:p.Ala275Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.230G>A
  hgvsp: ENSP00000455200.1:p.Ala78Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.508G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.865G>A
  hgvsp: ENSP00000389456.2:p.Ala289Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.521G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.712G>A
  hgvsp: ENSP00000454376.1:p.Ala238Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.823G>A
  hgvsp: ENSP00000042381.4:p.Ala275Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*195G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.105G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.835G>A
  hgvsp: ENSP00000368614.3:p.Ala279Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.587G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.883G>A
  hgvsp: ENSP00000400099.2:p.Ala295Thr
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala295Thr
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD

16-67575361-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575361
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575361
    reference: chr 16
allele count: 2
allele frequency: 1.650791554550407e-5
allele num: 121154
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.890A>T
  hgvsp: ENSP00000443568.3:p.His297Leu
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.872A>T
  hgvsp: ENSP00000389456.2:p.His291Leu
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.719A>T
  hgvsp: ENSP00000454376.1:p.His240Leu
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.830A>T
  hgvsp: ENSP00000042381.4:p.His277Leu
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.237A>T
  hgvsp: ENSP00000455200.1:p.His80Leu
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*202A>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.830A>T
  hgvsp: ENSP00000456893.1:p.His277Leu
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.112A>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.890A>T
  hgvsp: ENSP00000400099.2:p.His297Leu
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.515A>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.528A>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.842A>T
  hgvsp: ENSP00000368614.3:p.His281Leu
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.594A>T
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10707
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His297Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD

16-67575371-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575371
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575371
    reference: chr 16
allele count: 11
allele frequency: 9.068275873439844e-5
allele num: 121302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.900G>T
  hgvsp: ENST00000540839.3:c.900G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.538G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.840G>T
  hgvsp: ENST00000566559.1:c.840G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.840G>T
  hgvsp: ENST00000042381.4:c.840G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*212G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.729G>T
  hgvsp: ENST00000569253.1:c.729G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.900G>T
  hgvsp: ENST00000422602.2:c.900G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.852G>T
  hgvsp: ENST00000379312.3:c.852G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.247G>T
  hgvsp: ENST00000569179.1:c.247G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.882G>T
  hgvsp: ENST00000428437.2:c.882G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.604G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.122G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.525G>T
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14593
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val300Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

16-67575384-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575384
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575384
    reference: chr 16
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.913T>C
  hgvsp: ENSP00000400099.2:p.Cys305Arg
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.260T>C
  hgvsp: ENSP00000455200.1:p.Cys88Arg
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.742T>C
  hgvsp: ENSP00000454376.1:p.Cys248Arg
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*225T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.853T>C
  hgvsp: ENSP00000042381.4:p.Cys285Arg
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.617T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.853T>C
  hgvsp: ENSP00000456893.1:p.Cys285Arg
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.895T>C
  hgvsp: ENSP00000389456.2:p.Cys299Arg
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.135T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.538T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.913T>C
  hgvsp: ENSP00000443568.3:p.Cys305Arg
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.551T>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.865T>C
  hgvsp: ENSP00000368614.3:p.Cys289Arg
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14610
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10731
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys305Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-67575387-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575387
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575387
    reference: chr 16
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.856G>A
  hgvsp: ENSP00000042381.4:p.Glu286Lys
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.620G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.898G>A
  hgvsp: ENSP00000389456.2:p.Glu300Lys
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.916G>A
  hgvsp: ENSP00000443568.3:p.Glu306Lys
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.856G>A
  hgvsp: ENSP00000456893.1:p.Glu286Lys
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.263G>A
  hgvsp: ENSP00000455200.1:p.Glu89Lys
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.916G>A
  hgvsp: ENSP00000400099.2:p.Glu306Lys
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*228G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.745G>A
  hgvsp: ENSP00000454376.1:p.Glu249Lys
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.138G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.541G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.868G>A
  hgvsp: ENSP00000368614.3:p.Glu290Lys
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.554G>A
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10729
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14612
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu306Lys
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/16-67575394-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575394
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575394
    reference: chr 16
allele count: 2
allele frequency: 1.647826516824309e-5
allele num: 121372
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.875A>C
  hgvsp: ENSP00000368614.3:p.Lys292Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*235A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.923A>C
  hgvsp: ENSP00000400099.2:p.Lys308Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.863A>C
  hgvsp: ENSP00000456893.1:p.Lys288Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.905A>C
  hgvsp: ENSP00000389456.2:p.Lys302Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.627A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.752A>C
  hgvsp: ENSP00000454376.1:p.Lys251Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.548A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.561A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.270A>C
  hgvsp: ENSP00000455200.1:p.Lys91Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.145A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.863A>C
  hgvsp: ENSP00000042381.4:p.Lys288Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.923A>C
  hgvsp: ENSP00000443568.3:p.Lys308Thr
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14605
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10729
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys308Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum

16-67575407-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575407
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575407
    reference: chr 16
allele count: 5
allele frequency: 4.119294776734223e-5
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.936C>T
  hgvsp: ENST00000540839.3:c.936C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.574C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.283C>T
  hgvsp: ENST00000569179.1:c.283C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.888C>T
  hgvsp: ENST00000379312.3:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.640C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.936C>T
  hgvsp: ENST00000422602.2:c.936C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.876C>T
  hgvsp: ENST00000566559.1:c.876C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.918C>T
  hgvsp: ENST00000428437.2:c.918C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.876C>T
  hgvsp: ENST00000042381.4:c.876C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*248C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.561C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.765C>T
  hgvsp: ENST00000569253.1:c.765C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.158C>T
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28873
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10734
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14595
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala312Ala
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD

16-67575408-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575408
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575408
    reference: chr 16
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.284G>A
  hgvsp: ENSP00000455200.1:p.Ala96Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.575G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.919G>A
  hgvsp: ENSP00000389456.2:p.Ala307Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.889G>A
  hgvsp: ENSP00000368614.3:p.Ala297Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*249G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.766G>A
  hgvsp: ENSP00000454376.1:p.Ala256Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.159G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.937G>A
  hgvsp: ENSP00000443568.3:p.Ala313Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.937G>A
  hgvsp: ENSP00000400099.2:p.Ala313Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.877G>A
  hgvsp: ENSP00000456893.1:p.Ala293Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.641G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.877G>A
  hgvsp: ENSP00000042381.4:p.Ala293Thr
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.562G>A
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14596
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala313Thr
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD

16-67575421-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575421
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575421
    reference: chr 16
allele count: 628
allele frequency: 5.17366374480986e-3
allele num: 121384
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.950T>G
  hgvsp: ENSP00000400099.2:p.Val317Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.779T>G
  hgvsp: ENSP00000454376.1:p.Val260Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.890T>G
  hgvsp: ENSP00000042381.4:p.Val297Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.297T>G
  hgvsp: ENSP00000455200.1:p.Val100Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.890T>G
  hgvsp: ENSP00000456893.1:p.Val297Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.654T>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*262T>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.950T>G
  hgvsp: ENSP00000443568.3:p.Val317Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.902T>G
  hgvsp: ENSP00000368614.3:p.Val301Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.932T>G
  hgvsp: ENSP00000389456.2:p.Val311Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.172T>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.588T>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.575T>G
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28872
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14566
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10728
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Val317Gly
num of homozygotes: 2
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

16-67575430-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575430
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575430
    reference: chr 16
allele count: 5
allele frequency: 4.124936063491016e-5
allele num: 121214
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.306T>G
  hgvsp: ENSP00000455200.1:p.Val103Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.788T>G
  hgvsp: ENSP00000454376.1:p.Val263Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.899T>G
  hgvsp: ENSP00000456893.1:p.Val300Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.941T>G
  hgvsp: ENSP00000389456.2:p.Val314Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.911T>G
  hgvsp: ENSP00000368614.3:p.Val304Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.597T>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.181T>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.959T>G
  hgvsp: ENSP00000400099.2:p.Val320Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*271T>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.663T>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.959T>G
  hgvsp: ENSP00000443568.3:p.Val320Gly
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.584T>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.899T>G
  hgvsp: ENSP00000042381.4:p.Val300Gly
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 29116
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val320Gly
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

16-67575431-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575431
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575431
    reference: chr 16
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*272G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.900G>A
  hgvsp: ENST00000566559.1:c.900G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.789G>A
  hgvsp: ENST00000569253.1:c.789G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.585G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.307G>A
  hgvsp: ENST00000569179.1:c.307G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.598G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.942G>A
  hgvsp: ENST00000428437.2:c.942G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.960G>A
  hgvsp: ENST00000422602.2:c.960G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.960G>A
  hgvsp: ENST00000540839.3:c.960G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.912G>A
  hgvsp: ENST00000379312.3:c.912G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.900G>A
  hgvsp: ENST00000042381.4:c.900G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.664G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.182G>A
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10888
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val320Val
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

16-67575461-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575461
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575461
    reference: chr 16
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.990C>G
  hgvsp: ENST00000422602.2:c.990C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.942C>G
  hgvsp: ENST00000379312.3:c.942C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.972C>G
  hgvsp: ENST00000428437.2:c.972C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.628C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.212C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.819C>G
  hgvsp: ENST00000569253.1:c.819C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.930C>G
  hgvsp: ENST00000566559.1:c.930C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.337C>G
  hgvsp: ENST00000569179.1:c.337C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.615C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.694C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*302C>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.930C>G
  hgvsp: ENST00000042381.4:c.930C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.990C>G
  hgvsp: ENST00000540839.3:c.990C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29186
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu330Leu
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ

16-67575464-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575464
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575464
    reference: chr 16
allele count: 5
allele frequency: 4.119566292060772e-5
allele num: 121372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.975C>T
  hgvsp: ENST00000428437.2:c.975C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.340C>T
  hgvsp: ENST00000569179.1:c.340C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.933C>T
  hgvsp: ENST00000042381.4:c.933C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.933C>T
  hgvsp: ENST00000566559.1:c.933C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*305C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.822C>T
  hgvsp: ENST00000569253.1:c.822C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.993C>T
  hgvsp: ENST00000540839.3:c.993C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.993C>T
  hgvsp: ENST00000422602.2:c.993C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.215C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.618C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.697C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.631C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.945C>T
  hgvsp: ENST00000379312.3:c.945C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10897
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser331Ser
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-67575475-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575475
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575475
    reference: chr 16
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000566730
  gene symbol: FAM65A
  hgvsc: ENST00000566730.1:n.629C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.944C>T
  hgvsp: ENSP00000456893.1:p.Thr315Ile
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.226C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.1004C>T
  hgvsp: ENSP00000400099.2:p.Thr335Ile
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.833C>T
  hgvsp: ENSP00000454376.1:p.Thr278Ile
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.351C>T
  hgvsp: ENSP00000455200.1:p.Thr118Ile
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.944C>T
  hgvsp: ENSP00000042381.4:p.Thr315Ile
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.986C>T
  hgvsp: ENSP00000389456.2:p.Thr329Ile
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.642C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.1004C>T
  hgvsp: ENSP00000443568.3:p.Thr335Ile
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000561534
  gene symbol: FAM65A
  hgvsc: ENST00000561534.1:n.708C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000457419
  ensembl transcript: ENST00000566815
  gene symbol: FAM65A
  hgvsc: ENST00000566815.1:c.*316C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.956C>T
  hgvsp: ENSP00000368614.3:p.Thr319Ile
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10889
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29204
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr335Ile
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

16-67575487-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575487
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575486
    reference: chr 16
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.950+10delG
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.950+10delG
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.1010+10delG
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.357+10delG
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.232+10delG
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.648+10delG
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.839+10delG
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.992+10delG
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.962+10delG
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.1010+10delG
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42022
  bin: 6.25e1
  variant carriers: 0
hgvs: c.1010+10delG
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: TG
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS

16-67575489-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575489
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575489
    reference: chr 16
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.357+8G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.962+8G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.839+8G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.232+8G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.950+8G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.950+8G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.1010+8G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.1010+8G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.648+8G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.992+8G>A
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14337
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: c.1010+8G>A
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

16-67575504-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575504
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575504
    reference: chr 16
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.357+23G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.648+23G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.950+23G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.962+23G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.839+23G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.1010+23G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.950+23G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.232+23G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.1010+23G>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.992+23G>C
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

16-67575504-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575504
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575504
    reference: chr 16
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.950+23G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.950+23G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.357+23G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.1010+23G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.992+23G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.232+23G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.1010+23G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.962+23G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.648+23G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.839+23G>A
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2325
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

16-67575504-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575504
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575504
    reference: chr 16
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.648+23G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.962+23G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.992+23G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.950+23G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.950+23G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.232+23G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.839+23G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.1010+23G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.357+23G>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.1010+23G>T
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1980
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

16-67575514-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575514
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575514
    reference: chr 16
allele count: 10
allele frequency: 8.243887157672586e-5
allele num: 121302
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.962+33A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.1010+33A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.357+33A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.232+33A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.950+33A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.648+33A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.839+33A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.950+33A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.992+33A>G
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.1010+33A>G
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29522
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

16-67575523-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575523
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575523
    reference: chr 16
allele count: 3
allele frequency: 2.473084595980413e-5
allele num: 121306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.1011-33G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.951-33G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.951-33G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.963-33G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.993-33G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.649-33G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.358-33G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.233-33G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.840-33G>A
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.1011-33G>A
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10703
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29651
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2202
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-67575528-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575528
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575528
    reference: chr 16
allele count: 17
allele frequency: 1.418936965811966e-4
allele num: 119808
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.951-28A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.840-28A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.358-28A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.963-28A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000042381
  ensembl transcript: ENST00000042381
  gene symbol: FAM65A
  hgvsc: ENST00000042381.4:c.951-28A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.649-28A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.1011-28A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.233-28A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.993-28A>C
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.1011-28A>C
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29720
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14546
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10652
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 3.75e1
  variant carriers: 3
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

16-67575552-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 67575552
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 67575552
    reference: chr 16
allele count: 6
allele frequency: 4.942909396470763e-5
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000389456
  ensembl transcript: ENST00000428437
  gene symbol: FAM65A
  hgvsc: ENST00000428437.2:c.993-4C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000368614
  ensembl transcript: ENST00000379312
  gene symbol: FAM65A
  hgvsc: ENST00000379312.3:c.963-4C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569733
  gene symbol: FAM65A
  hgvsc: ENST00000569733.2:n.233-4C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000443568
  ensembl transcript: ENST00000540839
  gene symbol: FAM65A
  hgvsc: ENST00000540839.3:c.1011-4C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000455200
  ensembl transcript: ENST00000569179
  gene symbol: FAM65A
  hgvsc: ENST00000569179.1:c.358-4C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl transcript: ENST00000569474
  gene symbol: FAM65A
  hgvsc: ENST00000569474.1:n.649-4C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000400099
  ensembl transcript: ENST00000422602
  gene symbol: FAM65A
  hgvsc: ENST00000422602.2:c.1011-4C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000456893
  ensembl transcript: ENST00000566559
  gene symbol: FAM65A
  hgvsc: ENST00000566559.1:c.951-4C>T
  variant of: http://identifiers.org/hgnc/25836
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000039523
  ensembl protein: ENSP00000454376
  ensembl transcript: ENST00000569253
  gene symbol: FAM65A
  hgvsc: ENST00000569253.1:c.840-4C>T
  variant of: http://identifiers.org/hgnc/25836
canonical: true
consequence: splice region
filter: PASS
hgvs: c.1011-4C>T
num of homozygotes: 0
reference allele: C

GenotypeDepth
all individuals: 6632
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7135
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4834
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3425
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3257
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2639
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10033
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3241
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4632
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30368
bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 3018
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 21
allele frequency: 1.271956390066626e-3
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.632e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.78e-1

FS
type: SiteQuality
SIO_000300: 1.802e0

DP
type: SiteQuality
SIO_000300: 2.944051e6

MQ
type: SiteQuality
SIO_000300: 5.816e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.432e1

GenotypeDepth
all individuals: 1562
bin: 9.75e1
variant carriers: 4

GenotypeDepth
all individuals: 7137
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1923
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2638
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3257
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30364
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 3241
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10040
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3426
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3017
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4631
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.098447149109659e-4
allele num: 66716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.023888720895071e-4
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.41e1

MQRankSum
type: SiteQuality
SIO_000300: 3.89e-1

FS
type: SiteQuality
SIO_000300: 1.746e0

DP
type: SiteQuality
SIO_000300: 2.944062e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.29e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e-1

GenotypeDepth
all individuals: 437
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1560
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4836
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3425
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3256
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3017
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10033
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30366
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2643
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4630
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3245
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.713e0

DP
type: SiteQuality
SIO_000300: 2.943794e6

MQRankSum
type: SiteQuality
SIO_000300: -1.178e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -5.42e-2

FS
type: SiteQuality
SIO_000300: 2.174e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

QD
type: SiteQuality
SIO_000300: 1.031e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.53e-1

GenotypeDepth
all individuals: 1561
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4158
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5344
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3244
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3017
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3427
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2643
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30368
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3255
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10002
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4629
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.109e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.669999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.646e0

DP
type: SiteQuality
SIO_000300: 2.943922e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

QD
type: SiteQuality
SIO_000300: 1.008e1

GenotypeDepth
all individuals: 4117
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4841
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 915
bin: 8.25e1
variant carriers: 2

GenotypeDepth
all individuals: 5538
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3247
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3018
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30373
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 2644
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4625
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3432
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3255
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9977
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.049286485190071e-4
allele num: 66712
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.59e0

DP
type: SiteQuality
SIO_000300: 2.943951e6

FS
type: SiteQuality
SIO_000300: 1.094e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

MQRankSum
type: SiteQuality
SIO_000300: 4.98e-1

QD
type: SiteQuality
SIO_000300: 1.365e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.26e-1

GenotypeDepth
all individuals: 629
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3243
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3255
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4624
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3430
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30374
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 9964
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3018
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2643
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.09e-1

QD
type: SiteQuality
SIO_000300: 3.06e0

DP
type: SiteQuality
SIO_000300: 2.943884e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.418e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.07e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.118e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

GenotypeDepth
all individuals: 5537
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6701
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7137
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1562
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2648
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9884
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3236
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4592
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3429
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3267
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3019
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30378
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.4e-1

FS
type: SiteQuality
SIO_000300: 1.629e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.92e0

DP
type: SiteQuality
SIO_000300: 2.943166e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.27e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.48e0

QD
type: SiteQuality
SIO_000300: 1.342e1

VQSLOD
type: SiteQuality
SIO_000300: -2.661e0

GenotypeDepth
all individuals: 438
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6630
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1292
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1925
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9861
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3235
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4586
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3019
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3267
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30379
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3423
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2647
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.49e-2

DP
type: SiteQuality
SIO_000300: 2.943139e6

FS
type: SiteQuality
SIO_000300: 9.532999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.047e0

MQRankSum
type: SiteQuality
SIO_000300: -5.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.343e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

MQ
type: SiteQuality
SIO_000300: 5.895e1

QD
type: SiteQuality
SIO_000300: 1.03e1

GenotypeDepth
all individuals: 1925
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6700
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7138
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5339
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 438
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 630
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3267
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3020
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3430
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2645
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30379
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4580
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9852
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3231
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.219e1

VQSLOD
type: SiteQuality
SIO_000300: 1.64e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.452e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

DP
type: SiteQuality
SIO_000300: 2.942662e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.39e-2

GenotypeDepth
all individuals: 438
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6633
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 95
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1562
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5327
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3420
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3266
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9812
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3022
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4545
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2648
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30386
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3222
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

DP
type: SiteQuality
SIO_000300: 2.940865e6

VQSLOD
type: SiteQuality
SIO_000300: 2.4e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

QD
type: SiteQuality
SIO_000300: 1.096e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.68e-1

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 915
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1562
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6634
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6698
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30389
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4522
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3266
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3217
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2649
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9747
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3425
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3021
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.100536847242558e-5
allele num: 16392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.09e-1

DP
type: SiteQuality
SIO_000300: 2.940235e6

MQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.94e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.322e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 8.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.24e-1

GenotypeDepth
all individuals: 439
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1926
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1563
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4157
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 629
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3265
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2648
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3218
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3419
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9766
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4500
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30393
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 192
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3021
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.882952142994427e-4
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.107243190423842e-5
allele num: 16374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.026e0

QD
type: SiteQuality
SIO_000300: 1.164e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.504e0

DP
type: SiteQuality
SIO_000300: 2.940009e6

MQ
type: SiteQuality
SIO_000300: 5.931e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.8e-1

GenotypeDepth
all individuals: 4157
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2952
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 439
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 916
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1293
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3267
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3210
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3023
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4468
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30394
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9680
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3420
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2649
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16298
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.69e-1

QD
type: SiteQuality
SIO_000300: 1.068e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e0

DP
type: SiteQuality
SIO_000300: 2.938026e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.488e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.977e1

GenotypeDepth
all individuals: 916
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 439
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6634
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5538
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7140
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9671
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3263
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2650
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3022
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30397
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 49
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3414
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4453
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3205
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66636
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.108647450110865e-3
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16228
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.934e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQRankSum
type: SiteQuality
SIO_000300: 8.46e-1

QD
type: SiteQuality
SIO_000300: 1.089e1

FS
type: SiteQuality
SIO_000300: 4.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e-1

DP
type: SiteQuality
SIO_000300: 2.936551e6

GenotypeDepth
all individuals: 439
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5538
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 916
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4701
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1567
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 47
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3021
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3205
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3412
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4447
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3261
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9650
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2649
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30400
bin: 9.75e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00147072065312e-5
allele num: 66634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16218
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.485e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

DP
type: SiteQuality
SIO_000300: 2.936502e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

MQRankSum
type: SiteQuality
SIO_000300: -2.4e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.51e-1

GenotypeDepth
all individuals: 439
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6696
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1294
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2952
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 332
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3185
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2648
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3260
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30401
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3409
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4412
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9498
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3021
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16090
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501726986033939e-5
allele num: 66590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.933208e6

FS
type: SiteQuality
SIO_000300: 4.082e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.661e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

MQRankSum
type: SiteQuality
SIO_000300: 2.61e-1

QD
type: SiteQuality
SIO_000300: 1.228e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.13e-1

GenotypeDepth
all individuals: 4157
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 630
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5538
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5307
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1294
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2646
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3163
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1212
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3257
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8724
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30405
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4264
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3021
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3390
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.388143605468251e-5
allele num: 15654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.35e0

MQ
type: SiteQuality
SIO_000300: 5.878e1

DP
type: SiteQuality
SIO_000300: 2.921155e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.55e-1

FS
type: SiteQuality
SIO_000300: 7.279e0

QD
type: SiteQuality
SIO_000300: 1.154e1

MQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.168e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.34e-1

GenotypeDepth
all individuals: 4156
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 946
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 630
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 439
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1926
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3252
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3377
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30402
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 147
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3148
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1497
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8539
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2645
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3021
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4213
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.915119e6

VQSLOD
type: SiteQuality
SIO_000300: -1.127e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.56e0

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.472e0

QD
type: SiteQuality
SIO_000300: 1.66e1

FS
type: SiteQuality
SIO_000300: 8.281000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

GenotypeDepth
all individuals: 4770
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6694
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6633
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 630
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7140
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3244
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2645
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30403
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4153
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3369
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7657
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2243
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3137
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3021
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14826
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66126
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.75e-1

DP
type: SiteQuality
SIO_000300: 2.90022e6

FS
type: SiteQuality
SIO_000300: 1.733e0

MQRankSum
type: SiteQuality
SIO_000300: 5.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.978e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.037e1

QD
type: SiteQuality
SIO_000300: 1.531e1

GenotypeDepth
all individuals: 3992
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2952
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7140
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1926
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5289
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3353
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3285
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3099
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2645
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30403
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 201
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6540
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3021
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3242
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3938
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521236460995497e-5
allele num: 65736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13738
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.175e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-1

DP
type: SiteQuality
SIO_000300: 2.877497e6

FS
type: SiteQuality
SIO_000300: 6.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.16e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

GenotypeDepth
all individuals: 1574
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 1926
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 916
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6694
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 439
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3348
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30404
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3021
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2645
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3408
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3906
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3093
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6327
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3242
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.409602845287492e-5
allele num: 13496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523554147114388e-5
allele num: 65636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e0

MQ
type: SiteQuality
SIO_000300: 5.987e1

DP
type: SiteQuality
SIO_000300: 2.873366e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.296e1

MQRankSum
type: SiteQuality
SIO_000300: -2.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.620000000000001e-1

FS
type: SiteQuality
SIO_000300: 8.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.2e-1

GenotypeDepth
all individuals: 2071
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1926
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4155
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7140
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2952
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3241
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3021
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3888
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3346
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2645
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3625
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30404
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6097
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3091
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12964
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527930570834861e-5
allele num: 65448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.56e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.354e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 1.386e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.12e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.81e-1

FS
type: SiteQuality
SIO_000300: 6.18e-1

DP
type: SiteQuality
SIO_000300: 2.866414e6

MQ
type: SiteQuality
SIO_000300: 5.877e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

GenotypeDepth
all individuals: 1926
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 916
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2952
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1293
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 439
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3869
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30404
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 135
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3342
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5959
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3088
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3707
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3021
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3240
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2645
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.064194882794546e-5
allele num: 65270
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12546
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 4.977e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.76e-1

MQ
type: SiteQuality
SIO_000300: 5.992e1

QD
type: SiteQuality
SIO_000300: 1.186e1

DP
type: SiteQuality
SIO_000300: 2.861593e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-2

GenotypeDepth
all individuals: 1578
bin: 9.75e1
variant carriers: 3

GenotypeDepth
all individuals: 4222
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 916
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2102
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 439
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3869
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2645
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5936
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3760
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3341
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3020
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3240
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30403
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 265
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3087
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.59826492136967e-5
allele num: 65242
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.75e-1

DP
type: SiteQuality
SIO_000300: 2.86068e6

FS
type: SiteQuality
SIO_000300: 1.806e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

VQSLOD
type: SiteQuality
SIO_000300: 5.639999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.31e0

QD
type: SiteQuality
SIO_000300: 1.283e1

GenotypeDepth
all individuals: 4153
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5537
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6694
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3410
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3340
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5715
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3241
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3019
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3849
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2825
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1689
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3085
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30405
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 36
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2645
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64642
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.328358208955224e-5
allele num: 10720
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.89e-1

DP
type: SiteQuality
SIO_000300: 2.845006e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 6.99e-1

QD
type: SiteQuality
SIO_000300: 1.271e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 1293
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7140
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1926
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3341
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3241
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3086
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5708
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2645
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3849
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1833
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2673
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30408
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3019
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.831257078142696e-4
allele num: 10596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

DP
type: SiteQuality
SIO_000300: 2.844043e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.76e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

FS
type: SiteQuality
SIO_000300: 3.253e0

VQSLOD
type: SiteQuality
SIO_000300: 8.21e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.307e0

QD
type: SiteQuality
SIO_000300: 1.458e1

GenotypeDepth
all individuals: 1582
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2645
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3019
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3342
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2644
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3239
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3847
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1535
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5704
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30406
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3087
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.556226462074761e-5
allele num: 64258
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.022e0

MQRankSum
type: SiteQuality
SIO_000300: 9.27e-1

MQ
type: SiteQuality
SIO_000300: 6.013e1

DP
type: SiteQuality
SIO_000300: 2.835304e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.234e0

VQSLOD
type: SiteQuality
SIO_000300: 4.87e-1

FS
type: SiteQuality
SIO_000300: 1.163e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.401e0

QD
type: SiteQuality
SIO_000300: 1.23e1

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5704
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3088
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2959
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30407
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3018
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2645
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3242
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3341
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.704735376044568e-5
allele num: 11488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64122
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.603e0

MQ
type: SiteQuality
SIO_000300: 5.578e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.93e-1

QD
type: SiteQuality
SIO_000300: 2.58e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.019e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

DP
type: SiteQuality
SIO_000300: 2.82967e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.52e0

FS
type: SiteQuality
SIO_000300: 2.8072e1

MQRankSum
type: SiteQuality
SIO_000300: -4.407e0

GenotypeDepth
all individuals: 2952
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3340
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30406
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3841
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3241
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2935
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2646
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5699
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3087
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3019
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.559721745640578e-5
allele num: 64114
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

DP
type: SiteQuality
SIO_000300: 2.829108e6

MQ
type: SiteQuality
SIO_000300: 5.922e1

FS
type: SiteQuality
SIO_000300: 1.5269e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.966e0

VQSLOD
type: SiteQuality
SIO_000300: -2.913e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.094e0

MQRankSum
type: SiteQuality
SIO_000300: 9.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.57e-1

QD
type: SiteQuality
SIO_000300: 1.174e1

GenotypeQuality
all individuals: 378
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5692
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3087
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2646
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2910
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3019
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30407
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3842
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9186
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.559770401796856e-5
allele num: 64112
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQ
type: SiteQuality
SIO_000300: 5.1e1

QD
type: SiteQuality
SIO_000300: 3.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 1.348e0

MQRankSum
type: SiteQuality
SIO_000300: -5.058e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

DP
type: SiteQuality
SIO_000300: 2.82893e6

GenotypeDepth
all individuals: 1926
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2740
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5671
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3086
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30407
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2647
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3839
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3242
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3018
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3339
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9136
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.223750652968832e-4
allele num: 11486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64090
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.931e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
SIO_000300: 1.07e1

MQRankSum
type: SiteQuality
SIO_000300: -9.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.2e-3

DP
type: SiteQuality
SIO_000300: 2.829282e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.23e-1

FS
type: SiteQuality
SIO_000300: 8.67e0

GenotypeDepth
all individuals: 236
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1121
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 194
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2514
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1347
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36308
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8651
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3332
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1029
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2251
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65458
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.109e0

MQRankSum
type: SiteQuality
SIO_000300: 5.07e-1

MQ
type: SiteQuality
SIO_000300: 5.884e1

QD
type: SiteQuality
SIO_000300: 1.526e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 2.002807e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.004e0

FS
type: SiteQuality
SIO_000300: 3.218e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.539999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

GenotypeDepth
all individuals: 110
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 140
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1411
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 68
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 972
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8653
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1574
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 739
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36540
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2514
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2242
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3330
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1025
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527323823196994e-5
allele num: 65474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.908e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

QD
type: SiteQuality
SIO_000300: 1.267e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.59e-1

FS
type: SiteQuality
SIO_000300: 1.925e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 2.00382e6

GenotypeDepth
all individuals: 31
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 407
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 920
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8688
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1766
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3327
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 432
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1025
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2241
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37046
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2519
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.1014674029104e-5
allele num: 65558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13942
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.891e1

DP
type: SiteQuality
SIO_000300: 2.010973e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.45e-1

QD
type: SiteQuality
SIO_000300: 1.343e1

VQSLOD
type: SiteQuality
SIO_000300: 1.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

MQRankSum
type: SiteQuality
SIO_000300: 8.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

GenotypeDepth
all individuals: 319
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1406
bin: 9.75e1
variant carriers: 5

GenotypeDepth
all individuals: 236
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2239
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8714
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37498
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2525
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1791
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3323
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 167
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1024
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523832744118006e-5
allele num: 65624
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.462603878116343e-4
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14114
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.408e1

DP
type: SiteQuality
SIO_000300: 2.01387e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.26e-1

MQ
type: SiteQuality
SIO_000300: 5.91e1

MQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

FS
type: SiteQuality
SIO_000300: 5.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.879999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.531e0

GenotypeDepth
all individuals: 195
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 411
bin: 5.25e1
variant carriers: 5

GenotypeDepth
all individuals: 31
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 823
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1023
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3338
bin: 9.75e1
variant carriers: 753

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8710
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 66
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2525
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2238
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37550
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1774
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 8.75e1
variant carriers: 1

Latino
type: Population
allele count: 732
allele frequency: 6.335468236108707e-2
allele num: 11554
num of homozygotes: 30

Other
type: Population
allele count: 6
allele frequency: 6.912442396313364e-3
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.066585403016913e-4
allele num: 65630
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 1.272264631043257e-3
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 18
allele frequency: 1.271006919926564e-3
allele num: 14162
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.797101449275362e-4
allele num: 10350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.047777441790142e-4
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.54e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

DP
type: SiteQuality
SIO_000300: 2.049973e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.951e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.39e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.13e0

QD
type: SiteQuality
SIO_000300: 1.333e1

MQ
type: SiteQuality
SIO_000300: 5.913e1

GenotypeDepth
all individuals: 89
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2390
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 691
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1728
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38345
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8836
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 718
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2269
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2609
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 434
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2557
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 3.864734299516908e-4
allele num: 10350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14222
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.92e-1

QD
type: SiteQuality
SIO_000300: 1.254e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.093e0

VQSLOD
type: SiteQuality
SIO_000300: 2.75e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

FS
type: SiteQuality
SIO_000300: 1.8e0

DP
type: SiteQuality
SIO_000300: 1.783424e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.35e-1

GenotypeDepth
all individuals: 691
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 33
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 89
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2605
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 400
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38477
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2560
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2269
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1721
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8848
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65694
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14306
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.67e0

VQSLOD
type: SiteQuality
SIO_000300: -1.835e0

DP
type: SiteQuality
SIO_000300: 1.783739e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.916e1

QD
type: SiteQuality
SIO_000300: 1.143e1

FS
type: SiteQuality
SIO_000300: 1.765e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.18e-1

GenotypeDepth
all individuals: 1706
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 140
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 239
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2270
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1683
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8853
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38431
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2564
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2604
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1041
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.043306247907727e-5
allele num: 65718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.882e1

QD
type: SiteQuality
SIO_000300: 1.083e1

MQRankSum
type: SiteQuality
SIO_000300: 1.56e-1

FS
type: SiteQuality
SIO_000300: 1.134e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.543e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.44e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.181e-1

DP
type: SiteQuality
SIO_000300: 1.784367e6

GenotypeDepth
all individuals: 89
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 239
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38733
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2562
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2276
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8864
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1639
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1042
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2603
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 434
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65744
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.21e0

DP
type: SiteQuality
SIO_000300: 1.786125e6

VQSLOD
type: SiteQuality
SIO_000300: 2.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.664e0

MQRankSum
type: SiteQuality
SIO_000300: 2.21e0

FS
type: SiteQuality
SIO_000300: 3.904e0

QD
type: SiteQuality
SIO_000300: 1.334e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeDepth
all individuals: 33
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 111
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 140
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2602
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 399
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38906
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2276
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1040
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8878
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2567
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1548
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.561488869967157e-5
allele num: 65768
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

DP
type: SiteQuality
SIO_000300: 1.78921e6

FS
type: SiteQuality
SIO_000300: 5.27e-1

MQ
type: SiteQuality
SIO_000300: 5.888e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.509e0

QD
type: SiteQuality
SIO_000300: 1.192e1

GenotypeDepth
all individuals: 198
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 675
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 585
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 33
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 28243
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9126
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2600
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 677
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40762
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2607
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1049
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2311
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15748
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66332
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 8.086e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.24e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

QD
type: SiteQuality
SIO_000300: 1.536e1

DP
type: SiteQuality
SIO_000300: 1.816039e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.99e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.16e0

VQSLOD
type: SiteQuality
SIO_000300: -2.054e0

GenotypeDepth
all individuals: 1124
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 692
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 674
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 322
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 617
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2599
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 40730
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9132
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2603
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2311
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.326711375427053e-5
allele num: 15806
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.413e0

QD
type: SiteQuality
SIO_000300: 1.28e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.76e0

DP
type: SiteQuality
SIO_000300: 1.817442e6

VQSLOD
type: SiteQuality
SIO_000300: -2.309e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

FS
type: SiteQuality
SIO_000300: 1.81e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeDepth
all individuals: 692
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2396
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 322
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1124
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2599
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 136
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41034
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9149
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2604
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2315
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15940
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66392
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.624277456647399e-4
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.688e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.111e0

MQ
type: SiteQuality
SIO_000300: 5.926e1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.245e1

DP
type: SiteQuality
SIO_000300: 1.819414e6

GenotypeDepth
all individuals: 28588
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10690
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 322
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 89
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2627
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41487
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2596
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1049
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9209
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2321
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.825577e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.26e0

MQRankSum
type: SiteQuality
SIO_000300: 2.21e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.031e1

QD
type: SiteQuality
SIO_000300: 1.368e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.658e0

FS
type: SiteQuality
SIO_000300: 4.805e0

VQSLOD
type: SiteQuality
SIO_000300: -1.114e0

GenotypeDepth
all individuals: 693
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 28750
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 89
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 322
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2596
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1048
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9265
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2650
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2323
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41693
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.922337562475971e-4
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.94e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

MQRankSum
type: SiteQuality
SIO_000300: 3.31e-1

FS
type: SiteQuality
SIO_000300: 5.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.48e0

DP
type: SiteQuality
SIO_000300: 1.829026e6

QD
type: SiteQuality
SIO_000300: 1.413e1

GenotypeDepth
all individuals: 54
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 89
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 140
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 667
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 61
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2595
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 1049
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2321
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2653
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41837
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9269
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

African
type: Population
allele count: 11
allele frequency: 1.05708245243129e-3
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.949e1

MQRankSum
type: SiteQuality
SIO_000300: 8.37e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.01e-1

DP
type: SiteQuality
SIO_000300: 1.830597e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.67e0

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

QD
type: SiteQuality
SIO_000300: 1.432e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.74e-1

GenotypeDepth
all individuals: 695
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 28837
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 323
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 660
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41904
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9286
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2319
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2586
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2655
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.28e-1

QD
type: SiteQuality
SIO_000300: 1.416e1

DP
type: SiteQuality
SIO_000300: 1.829689e6

MQRankSum
type: SiteQuality
SIO_000300: 3.16e0

VQSLOD
type: SiteQuality
SIO_000300: -3.249e0

MQ
type: SiteQuality
SIO_000300: 5.941e1

FS
type: SiteQuality
SIO_000300: 1.046e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.016e0

GenotypeDepth
all individuals: 28848
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2398
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 111
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 323
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41919
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2586
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2318
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2654
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9289
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.612000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.612e1

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

FS
type: SiteQuality
SIO_000300: 1.056e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.829599e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.764e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

MQ
type: SiteQuality
SIO_000300: 5.896e1

GenotypeDepth
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1126
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 323
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 28862
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 89
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2653
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9293
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41925
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2587
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 404
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2316
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 7.69e0

DP
type: SiteQuality
SIO_000300: 1.829861e6

QD
type: SiteQuality
SIO_000300: 1.35e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.04e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.65e-1

GenotypeDepth
all individuals: 1125
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 111
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 89
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 694
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 197
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2653
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2586
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 437
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9298
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2317
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41929
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.497211728728189e-5
allele num: 66708
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

FS
type: SiteQuality
SIO_000300: 6.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.4e0

DP
type: SiteQuality
SIO_000300: 1.829863e6

VQSLOD
type: SiteQuality
SIO_000300: 8.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.94e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

QD
type: SiteQuality
SIO_000300: 1.434e1

GenotypeDepth
all individuals: 655
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 33
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 323
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 197
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10736
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41931
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2581
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2653
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2316
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9298
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.06e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.428e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.493e0

DP
type: SiteQuality
SIO_000300: 1.829095e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.063e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.75e-1

MQ
type: SiteQuality
SIO_000300: 5.865e1

QD
type: SiteQuality
SIO_000300: 1.274e1

GenotypeDepth
all individuals: 694
bin: 4.75e1
variant carriers: 7

GenotypeDepth
all individuals: 697
bin: 9.75e1
variant carriers: 572

GenotypeDepth
all individuals: 236
bin: 6.25e1
variant carriers: 3

GenotypeDepth
all individuals: 37
bin: 9.25e1
variant carriers: 7

GenotypeDepth
all individuals: 88
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 41908
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2654
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2311
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9292
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2634
bin: 9.75e1
variant carriers: 626

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 16
allele frequency: 1.537574476263694e-3
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 556
allele frequency: 8.334332653795419e-3
allele num: 66712
num of homozygotes: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 17
allele frequency: 1.468301951977889e-3
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 6.661821705426356e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 27
allele frequency: 4.082249773208346e-3
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.75e-1

DP
type: SiteQuality
SIO_000300: 1.83198e6

QD
type: SiteQuality
SIO_000300: 1.496e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.76e0

VQSLOD
type: SiteQuality
SIO_000300: 4.09e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

GenotypeDepth
all individuals: 151
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 114
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 71
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10825
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 242
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9360
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42248
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2675
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 431
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2327
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2011
bin: 9.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.933114247052001e-4
allele num: 10346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.504369238161016e-5
allele num: 66602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.9e0

DP
type: SiteQuality
SIO_000300: 1.752917e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.375e0

MQRankSum
type: SiteQuality
SIO_000300: 6.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 1.91261e2

QD
type: SiteQuality
SIO_000300: 3.2e-1

MQ
type: SiteQuality
SIO_000300: 5.642e1

VQSLOD
type: SiteQuality
SIO_000300: -1.791e2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.8e0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 29150
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 238
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9403
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2335
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42350
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1043
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2681
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2014
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.198e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.743158e6

VQSLOD
type: SiteQuality
SIO_000300: -1.583e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.61e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.45e-1

QD
type: SiteQuality
SIO_000300: 1.67e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

MQ
type: SiteQuality
SIO_000300: 5.854e1

GenotypeDepth
all individuals: 1146
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 104
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 325
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 86
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2013
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2675
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2337
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9393
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1042
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42208
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.311e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.69e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.323e0

VQSLOD
type: SiteQuality
SIO_000300: -1.72e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.54e1

DP
type: SiteQuality
SIO_000300: 1.742796e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.966e0

MQ
type: SiteQuality
SIO_000300: 5.915e1

GenotypeDepth
all individuals: 104
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.75e1
variant carriers: 3

GenotypeDepth
all individuals: 29198
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2464
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42187
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2331
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9389
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1043
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2675
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2013
bin: 9.75e1
variant carriers: 5

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.495802350683618e-5
allele num: 66704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.219e0

MQRankSum
type: SiteQuality
SIO_000300: -4.55e-1

FS
type: SiteQuality
SIO_000300: 2.586e0

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.967e1

DP
type: SiteQuality
SIO_000300: 1.742511e6

QD
type: SiteQuality
SIO_000300: 1.231e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.31e-1

GenotypeDepth
all individuals: 410
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14401
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 117
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 104
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2008
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2331
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9377
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1040
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2671
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42100
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.24e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.47e-1

QD
type: SiteQuality
SIO_000300: 1.171e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.21e0

DP
type: SiteQuality
SIO_000300: 1.741851e6

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

MQ
type: SiteQuality
SIO_000300: 5.936e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.242e0

GenotypeQuality
all individuals: 9373
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2328
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1039
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2673
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2008
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.177e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.91e0

DP
type: SiteQuality
SIO_000300: 1.741392e6

MQ
type: SiteQuality
SIO_000300: 5.987e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.016e0

QD
type: SiteQuality
SIO_000300: 1.029e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.12e-1

FS
type: SiteQuality
SIO_000300: 1.3765e1

GenotypeQuality
all individuals: 2004
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 77
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2670
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41953
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9368
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2331
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.17e-1

DP
type: SiteQuality
SIO_000300: 1.741191e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.8e-1

QD
type: SiteQuality
SIO_000300: 1.477e1

FS
type: SiteQuality
SIO_000300: 2.368e0

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.972e1

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1980
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 41933
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2325
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2665
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9353
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.918e1

DP
type: SiteQuality
SIO_000300: 1.737788e6

MQRankSum
type: SiteQuality
SIO_000300: 8.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e-1

QD
type: SiteQuality
SIO_000300: 1.097e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.18e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.45e-1

GenotypeQuality
all individuals: 2665
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9353
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41933
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1980
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.097e1

MQRankSum
type: SiteQuality
SIO_000300: 8.58e-1

DP
type: SiteQuality
SIO_000300: 1.737788e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.45e-1

MQ
type: SiteQuality
SIO_000300: 5.918e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.18e-1

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2325
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9353
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2665
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41933
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e-1

DP
type: SiteQuality
SIO_000300: 1.737788e6

MQRankSum
type: SiteQuality
SIO_000300: 8.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

MQ
type: SiteQuality
SIO_000300: 5.918e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.45e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

QD
type: SiteQuality
SIO_000300: 1.097e1

GenotypeQuality
all individuals: 1925
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2223
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 964
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2584
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9222
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42064
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.349851516333203e-4
allele num: 66674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e-1

DP
type: SiteQuality
SIO_000300: 1.729293e6

VQSLOD
type: SiteQuality
SIO_000300: 9.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.96e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

FS
type: SiteQuality
SIO_000300: 1.16e0

QD
type: SiteQuality
SIO_000300: 1.365e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

MQ
type: SiteQuality
SIO_000300: 5.954e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.93e-1

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1919
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41939
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 965
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2562
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9117
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.604e0

VQSLOD
type: SiteQuality
SIO_000300: 7.51e-1

FS
type: SiteQuality
SIO_000300: 1.74e0

QD
type: SiteQuality
SIO_000300: 1.302e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.18e-1

DP
type: SiteQuality
SIO_000300: 1.724346e6

MQ
type: SiteQuality
SIO_000300: 5.971e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.17e-1

GenotypeQuality
all individuals: 337
bin: 4.75e1
variant carriers: 4

GenotypeQuality
all individuals: 252
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2449
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 254
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2021
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 8886
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1267
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 256
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 41517
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 831
bin: 8.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.515702679762338e-4
allele num: 65976
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.918495297805642e-4
allele num: 10208
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.689607229753215e-5
allele num: 11508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.622323166774821e-4
allele num: 6164
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.829e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

VQSLOD
type: SiteQuality
SIO_000300: -1.331e2

QD
type: SiteQuality
SIO_000300: 5.0e-1

FS
type: SiteQuality
SIO_000300: 1.70033e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.54e-1

DP
type: SiteQuality
SIO_000300: 1.724216e6