19-48558116-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558116
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558116
    reference: chr 19
allele count: 1
allele frequency: 8.262004692818665e-6
allele num: 121036
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1429+19C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1459+19C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.182+19C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1429+19C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1429+19C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1139+19C>G
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5992
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7231
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5481
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5998
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6820
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2599
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2313
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38955
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2924
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum

19-48558122-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558122
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558122
    reference: chr 19
allele count: 1
allele frequency: 8.258456659619451e-6
allele num: 121088
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1459+13G>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1429+13G>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1139+13G>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1429+13G>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1429+13G>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.182+13G>C
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5481
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6030
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5672
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6822
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38958
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2940
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2137
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

19-48558122-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558122
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558122
    reference: chr 19
allele count: 1
allele frequency: 8.258456659619451e-6
allele num: 121088
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1459+13G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1429+13G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1429+13G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1429+13G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.182+13G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1139+13G>A
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5672
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6822
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5481
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6030
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2316
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38958
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2137
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ

19-48558127-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558127
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558127
    reference: chr 19
allele count: 1
allele frequency: 8.256411103221652e-6
allele num: 121118
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1429+8C>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1139+8C>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1429+8C>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1459+8C>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.182+8C>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1429+8C>A
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5481
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6061
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6822
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5683
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7233
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2317
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2139
  bin: 7.75e1
  variant carriers: 0
hgvs: c.1459+8C>A
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

19-48558139-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558139
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558139
    reference: chr 19
allele count: 2
allele frequency: 1.650464605786529e-5
allele num: 121178
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.178T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1135T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1425T>C
  hgvsp: ENST00000599921.1:c.1425T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1425T>C
  hgvsp: ENST00000354276.3:c.1425T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1455T>C
  hgvsp: ENST00000599111.1:c.1455T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1425T>C
  hgvsp: ENST00000413144.2:c.1425T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5481
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6104
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5686
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6824
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2318
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Cys485Cys
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

19-48558148-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558148
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558148
    reference: chr 19
allele count: 1
allele frequency: 8.247694769311978e-6
allele num: 121246
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1416A>G
  hgvsp: ENSP00000400036.2:p.Ile472Met
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1126A>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1416A>G
  hgvsp: ENSP00000346228.2:p.Ile472Met
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.169A>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1446A>G
  hgvsp: ENSP00000472546.1:p.Ile482Met
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1416A>G
  hgvsp: ENSP00000469473.1:p.Ile472Met
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.455A>G
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5692
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5481
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6823
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3985
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2147
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8479
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1489
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2601
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ile482Met
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP

19-48558149-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558149
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558149
    reference: chr 19
allele count: 2
allele frequency: 1.649402916144356e-5
allele num: 121256
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1415T>C
  hgvsp: ENSP00000469473.1:p.Ile472Thr
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.454T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1445T>C
  hgvsp: ENSP00000472546.1:p.Ile482Thr
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1415T>C
  hgvsp: ENSP00000400036.2:p.Ile472Thr
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.168T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1415T>C
  hgvsp: ENSP00000346228.2:p.Ile472Thr
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1125T>C
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6002
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5481
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3961
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6823
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7403
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1489
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8492
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2955
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile482Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

19-48558151-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558151
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558151
    reference: chr 19
allele count: 4
allele frequency: 3.298751422586551e-5
allele num: 121258
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.166C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.452C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1413C>T
  hgvsp: ENST00000354276.3:c.1413C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1443C>T
  hgvsp: ENST00000599111.1:c.1443C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1123C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1413C>T
  hgvsp: ENST00000413144.2:c.1413C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1413C>T
  hgvsp: ENST00000599921.1:c.1413C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7231
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6823
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6002
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5695
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7401
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5482
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6135
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8487
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2146
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2958
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asn481Asn
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

19-48558153-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558153
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558153
    reference: chr 19
allele count: 9
allele frequency: 7.421578652241316e-5
allele num: 121268
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1121A>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1411A>G
  hgvsp: ENSP00000469473.1:p.Asn471Asp
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1411A>G
  hgvsp: ENSP00000346228.2:p.Asn471Asp
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.164A>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1441A>G
  hgvsp: ENSP00000472546.1:p.Asn481Asp
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1411A>G
  hgvsp: ENSP00000400036.2:p.Asn471Asp
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.450A>G
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3958
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7400
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5479
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6822
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6002
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7231
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1489
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2962
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asn481Asp
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum

19-48558159-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558159
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558159
    reference: chr 19
allele count: 2738
allele frequency: 2.257213520197857e-2
allele num: 121300
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1405C>T
  hgvsp: ENST00000599921.1:c.1405C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.158C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1405C>T
  hgvsp: ENST00000413144.2:c.1405C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.444C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1405C>T
  hgvsp: ENST00000354276.3:c.1405C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1435C>T
  hgvsp: ENST00000599111.1:c.1435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1115C>T
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 6.25e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 6.75e1
  variant carriers: 96
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5384
  bin: 5.75e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 3.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 9.25e1
  variant carriers: 96
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 9.75e1
  variant carriers: 1479
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 8.25e1
  variant carriers: 108
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3839
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5985
  bin: 2.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 5768
  bin: 3.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 6662
  bin: 5.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 7.75e1
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 8.75e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 6987
  bin: 4.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 7.25e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 7188
  bin: 4.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 1
hgvs: p.Leu479Leu
num of homozygotes: 307
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

19-48558160-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558160
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558160
    reference: chr 19
allele count: 4
allele frequency: 3.297391763115376e-5
allele num: 121308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.157C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1404C>T
  hgvsp: ENST00000354276.3:c.1404C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1404C>T
  hgvsp: ENST00000599921.1:c.1404C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1434C>T
  hgvsp: ENST00000599111.1:c.1434C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1404C>T
  hgvsp: ENST00000413144.2:c.1404C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1114C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.443C>T
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5796
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3925
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7361
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5467
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3089
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8837
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38414
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1518
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro478Pro
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: QD

19-48558166-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558166
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558166
    reference: chr 19
allele count: 19
allele frequency: 1.566028716021298e-4
allele num: 121326
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1398T>C
  hgvsp: ENST00000413144.2:c.1398T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1428T>C
  hgvsp: ENST00000599111.1:c.1428T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1398T>C
  hgvsp: ENST00000599921.1:c.1398T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1108T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1398T>C
  hgvsp: ENST00000354276.3:c.1398T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.151T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.437T>C
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5466
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5794
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3106
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8850
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38417
  bin: 9.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
hgvs: p.His476His
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

19-48558169-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558169
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558169
    reference: chr 19
allele count: 1
allele frequency: 8.241305422778968e-6
allele num: 121340
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1425G>A
  hgvsp: ENSP00000472546.1:p.Met475Ile
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1105G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1395G>A
  hgvsp: ENSP00000346228.2:p.Met465Ile
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1395G>A
  hgvsp: ENSP00000400036.2:p.Met465Ile
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.434G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1395G>A
  hgvsp: ENSP00000469473.1:p.Met465Ile
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.148G>A
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6314
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5800
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5465
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2320
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3106
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38417
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Met475Ile
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/19-48558175-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558175
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558175
    reference: chr 19
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1389G>T
  hgvsp: ENST00000413144.2:c.1389G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.142G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1389G>T
  hgvsp: ENST00000354276.3:c.1389G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1099G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1419G>T
  hgvsp: ENST00000599111.1:c.1419G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.428G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1389G>T
  hgvsp: ENST00000599921.1:c.1389G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7202
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5465
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1544
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3107
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8864
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val473Val
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

19-48558175-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558175
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558175
    reference: chr 19
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1099G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1389G>A
  hgvsp: ENST00000599921.1:c.1389G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1389G>A
  hgvsp: ENST00000354276.3:c.1389G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.428G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1419G>A
  hgvsp: ENST00000599111.1:c.1419G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.142G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1389G>A
  hgvsp: ENST00000413144.2:c.1389G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7202
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5465
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2194
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2319
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val473Val
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-48558179-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558179
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558179
    reference: chr 19
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1385C>T
  hgvsp: ENSP00000400036.2:p.Pro462Leu
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.138C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1095C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1385C>T
  hgvsp: ENSP00000346228.2:p.Pro462Leu
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.424C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1385C>T
  hgvsp: ENSP00000469473.1:p.Pro462Leu
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: incomplete_terminal_codon_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.641C>T
  hgvsp: ENST00000599300.1:c.641C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1415C>T
  hgvsp: ENSP00000472546.1:p.Pro472Leu
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6330
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5465
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2319
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2644
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2194
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro472Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD

19-48558200-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558200
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558200
    reference: chr 19
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.403T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1074T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1394T>C
  hgvsp: ENSP00000472546.1:p.Ile465Thr
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1364T>C
  hgvsp: ENSP00000346228.2:p.Ile455Thr
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1364T>C
  hgvsp: ENSP00000469473.1:p.Ile455Thr
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.620T>C
  hgvsp: ENSP00000470418.1:p.Ile207Thr
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.117T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1364T>C
  hgvsp: ENSP00000400036.2:p.Ile455Thr
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6349
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5812
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5465
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7202
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1544
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1518
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8844
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3107
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38417
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ile465Thr
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ

19-48558205-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558205
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558205
    reference: chr 19
allele count: 1
allele frequency: 8.242120532770671e-6
allele num: 121328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.615C>T
  hgvsp: ENST00000599300.1:c.615C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1359C>T
  hgvsp: ENST00000354276.3:c.1359C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1359C>T
  hgvsp: ENST00000413144.2:c.1359C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1389C>T
  hgvsp: ENST00000599111.1:c.1389C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1359C>T
  hgvsp: ENST00000599921.1:c.1359C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.112C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.398C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1069C>T
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5465
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5808
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3107
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38416
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2320
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2643
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1519
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Cys463Cys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

19-48558213-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558213
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558213
    reference: chr 19
allele count: 9
allele frequency: 7.419376112906417e-5
allele num: 121304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1351G>A
  hgvsp: ENSP00000400036.2:p.Ala451Thr
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1351G>A
  hgvsp: ENSP00000346228.2:p.Ala451Thr
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1351G>A
  hgvsp: ENSP00000469473.1:p.Ala451Thr
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.607G>A
  hgvsp: ENSP00000470418.1:p.Ala203Thr
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1381G>A
  hgvsp: ENSP00000472546.1:p.Ala461Thr
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.104G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.390G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1061G>A
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7209
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6811
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5465
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7353
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8709
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2315
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1544
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala461Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

19-48558213-CG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558213
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558212
    reference: chr 19
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1380delC
  hgvsp: ENSP00000472546.1:p.Ala461ProfsTer6
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1350delC
  hgvsp: ENSP00000400036.2:p.Ala451ProfsTer6
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1350delC
  hgvsp: ENSP00000346228.2:p.Ala451ProfsTer6
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.389delC
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1060delC
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.606delC
  hgvsp: ENSP00000470418.1:p.Ala203ProfsTer6
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.103delC
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1350delC
  hgvsp: ENSP00000469473.1:p.Ala451ProfsTer6
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7209
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6811
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5465
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2315
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38418
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala461ProfsTer6
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: CG
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

19-48558214-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558214
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558214
    reference: chr 19
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.389C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1350C>T
  hgvsp: ENST00000599921.1:c.1350C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1350C>T
  hgvsp: ENST00000413144.2:c.1350C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1350C>T
  hgvsp: ENST00000354276.3:c.1350C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1060C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.606C>T
  hgvsp: ENST00000599300.1:c.606C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.103C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1380C>T
  hgvsp: ENST00000599111.1:c.1380C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5464
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7209
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2315
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2643
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro460Pro
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

19-48558216-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558216
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558216
    reference: chr 19
allele count: 2
allele frequency: 1.64883180266781e-5
allele num: 121298
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.101C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.604C>T
  hgvsp: ENSP00000470418.1:p.Pro202Ser
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1348C>T
  hgvsp: ENSP00000400036.2:p.Pro450Ser
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1058C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1378C>T
  hgvsp: ENSP00000472546.1:p.Pro460Ser
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1348C>T
  hgvsp: ENSP00000469473.1:p.Pro450Ser
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1348C>T
  hgvsp: ENSP00000346228.2:p.Pro450Ser
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.387C>T
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5790
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3804
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5464
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7353
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38413
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1511
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro460Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum

19-48558225-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558225
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558225
    reference: chr 19
allele count: 2
allele frequency: 1.649702228747711e-5
allele num: 121234
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1339T>A
  hgvsp: ENSP00000346228.2:p.Ser447Thr
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.92T>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1369T>A
  hgvsp: ENSP00000472546.1:p.Ser457Thr
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1339T>A
  hgvsp: ENSP00000400036.2:p.Ser447Thr
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1049T>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1339T>A
  hgvsp: ENSP00000469473.1:p.Ser447Thr
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.595T>A
  hgvsp: ENSP00000470418.1:p.Ser199Thr
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.378T>A
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5464
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5779
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser457Thr
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum

19-48558226-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558226
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558226
    reference: chr 19
allele count: 1
allele frequency: 8.250280509537325e-6
allele num: 121208
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1338G>A
  hgvsp: ENSP00000400036.2:p.Trp446Ter
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1338G>A
  hgvsp: ENSP00000469473.1:p.Trp446Ter
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1338G>A
  hgvsp: ENSP00000346228.2:p.Trp446Ter
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1368G>A
  hgvsp: ENSP00000472546.1:p.Trp456Ter
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.594G>A
  hgvsp: ENSP00000470418.1:p.Trp198Ter
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.377G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1048G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.91G>A
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5464
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5998
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2643
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8580
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Trp456Ter
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD

19-48558228-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558228
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558228
    reference: chr 19
allele count: 36
allele frequency: 2.97029702970297e-4
allele num: 121200
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1336T>C
  hgvsp: ENSP00000346228.2:p.Trp446Arg
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1336T>C
  hgvsp: ENSP00000469473.1:p.Trp446Arg
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.592T>C
  hgvsp: ENSP00000470418.1:p.Trp198Arg
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.375T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.89T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1366T>C
  hgvsp: ENSP00000472546.1:p.Trp456Arg
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1336T>C
  hgvsp: ENSP00000400036.2:p.Trp446Arg
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1046T>C
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 9.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5772
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5457
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7346
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2612
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6260
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6810
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3928
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1546
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8622
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2189
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Trp456Arg
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

19-48558229-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558229
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558229
    reference: chr 19
allele count: 2
allele frequency: 1.650410126916539e-5
allele num: 121182
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.591G>C
  hgvsp: ENSP00000470418.1:p.Leu197Phe
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1335G>C
  hgvsp: ENSP00000469473.1:p.Leu445Phe
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1045G>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1365G>C
  hgvsp: ENSP00000472546.1:p.Leu455Phe
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1335G>C
  hgvsp: ENSP00000400036.2:p.Leu445Phe
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1335G>C
  hgvsp: ENSP00000346228.2:p.Leu445Phe
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.374G>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.88G>C
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5998
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6814
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3931
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8598
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38404
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu455Phe
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

19-48558232-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558232
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558232
    reference: chr 19
allele count: 1
allele frequency: 8.253685270473266e-6
allele num: 121158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1332T>A
  hgvsp: ENSP00000400036.2:p.Asp444Glu
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1332T>A
  hgvsp: ENSP00000469473.1:p.Asp444Glu
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1362T>A
  hgvsp: ENSP00000472546.1:p.Asp454Glu
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1332T>A
  hgvsp: ENSP00000346228.2:p.Asp444Glu
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.588T>A
  hgvsp: ENSP00000470418.1:p.Asp196Glu
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1042T>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.371T>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.85T>A
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5997
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3931
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38404
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3040
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2644
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp454Glu
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD

19-48558233-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558233
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558233
    reference: chr 19
allele count: 3
allele frequency: 2.47610558114198e-5
allele num: 121158
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1331A>G
  hgvsp: ENSP00000469473.1:p.Asp444Gly
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.370A>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1331A>G
  hgvsp: ENSP00000346228.2:p.Asp444Gly
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.587A>G
  hgvsp: ENSP00000470418.1:p.Asp196Gly
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.84A>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1041A>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1331A>G
  hgvsp: ENSP00000400036.2:p.Asp444Gly
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1361A>G
  hgvsp: ENSP00000472546.1:p.Asp454Gly
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6211
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5766
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5997
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7347
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3931
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2311
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3036
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2189
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asp454Gly
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/19-48558235-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558235
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558235
    reference: chr 19
allele count: 1
allele frequency: 8.25559316436886e-6
allele num: 121130
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1329G>T
  hgvsp: ENST00000354276.3:c.1329G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1039G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.368G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.585G>T
  hgvsp: ENST00000599300.1:c.585G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.82G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1329G>T
  hgvsp: ENST00000413144.2:c.1329G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1329G>T
  hgvsp: ENST00000599921.1:c.1329G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1359G>T
  hgvsp: ENST00000599111.1:c.1359G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6814
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5757
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7348
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2184
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2310
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu453Leu
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD

19-48558236-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558236
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558236
    reference: chr 19
allele count: 1
allele frequency: 8.25559316436886e-6
allele num: 121130
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1328T>C
  hgvsp: ENSP00000400036.2:p.Leu443Pro
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.367T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.81T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1328T>C
  hgvsp: ENSP00000469473.1:p.Leu443Pro
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1328T>C
  hgvsp: ENSP00000346228.2:p.Leu443Pro
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.584T>C
  hgvsp: ENSP00000470418.1:p.Leu195Pro
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1358T>C
  hgvsp: ENSP00000472546.1:p.Leu453Pro
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1038T>C
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3746
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5992
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2311
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2644
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu453Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-48558244-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558244
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558244
    reference: chr 19
allele count: 1
allele frequency: 8.263097008758882e-6
allele num: 121020
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.359G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1030G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.73G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1350G>A
  hgvsp: ENST00000599111.1:c.1350G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.576G>A
  hgvsp: ENST00000599300.1:c.576G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1320G>A
  hgvsp: ENST00000599921.1:c.1320G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1320G>A
  hgvsp: ENST00000413144.2:c.1320G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1320G>A
  hgvsp: ENST00000354276.3:c.1320G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5716
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6124
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8435
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu450Glu
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

19-48558246-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558246
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558246
    reference: chr 19
allele count: 3
allele frequency: 2.479707725116133e-5
allele num: 120982
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1028G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.574G>A
  hgvsp: ENSP00000470418.1:p.Glu192Lys
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1318G>A
  hgvsp: ENSP00000400036.2:p.Glu440Lys
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.357G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1318G>A
  hgvsp: ENSP00000469473.1:p.Glu440Lys
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1348G>A
  hgvsp: ENSP00000472546.1:p.Glu450Lys
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1318G>A
  hgvsp: ENSP00000346228.2:p.Glu440Lys
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.71G>A
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3931
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6100
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3640
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5703
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38403
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2157
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2977
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Glu450Lys
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum

19-48558249-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558249
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558249
    reference: chr 19
allele count: 1
allele frequency: 8.271161767381846e-6
allele num: 120902
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1315G>A
  hgvsp: ENSP00000400036.2:p.Glu439Lys
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1025G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.354G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.68G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.571G>A
  hgvsp: ENSP00000470418.1:p.Glu191Lys
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1345G>A
  hgvsp: ENSP00000472546.1:p.Glu449Lys
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1315G>A
  hgvsp: ENSP00000469473.1:p.Glu439Lys
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1315G>A
  hgvsp: ENSP00000346228.2:p.Glu439Lys
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8271
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2299
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38402
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu449Lys
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

19-48558252-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558252
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558252
    reference: chr 19
allele count: 2
allele frequency: 1.654861984510492e-5
allele num: 120856
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.65G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1342G>A
  hgvsp: ENSP00000472546.1:p.Val448Ile
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1312G>A
  hgvsp: ENSP00000400036.2:p.Val438Ile
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.351G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.568G>A
  hgvsp: ENSP00000470418.1:p.Val190Ile
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1312G>A
  hgvsp: ENSP00000346228.2:p.Val438Ile
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1022G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1312G>A
  hgvsp: ENSP00000469473.1:p.Val438Ile
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3555
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5986
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5685
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6811
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7349
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2144
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val448Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

19-48558253-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558253
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558253
    reference: chr 19
allele count: 3
allele frequency: 2.482621648460775e-5
allele num: 120840
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.64A>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1311A>G
  hgvsp: ENST00000354276.3:c.1311A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.350A>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1341A>G
  hgvsp: ENST00000599111.1:c.1341A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.567A>G
  hgvsp: ENST00000599300.1:c.567A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1311A>G
  hgvsp: ENST00000413144.2:c.1311A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.1021A>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1311A>G
  hgvsp: ENST00000599921.1:c.1311A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5986
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1445
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1543
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln447Gln
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum

19-48558275-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558275
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558275
    reference: chr 19
allele count: 6
allele frequency: 5.023022185014651e-5
allele num: 119450
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1319G>A
  hgvsp: ENSP00000472546.1:p.Arg440His
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.328G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.999G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.42G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.545G>A
  hgvsp: ENSP00000470418.1:p.Arg182His
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1289G>A
  hgvsp: ENSP00000400036.2:p.Arg430His
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1289G>A
  hgvsp: ENSP00000346228.2:p.Arg430His
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1289G>A
  hgvsp: ENSP00000469473.1:p.Arg430His
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4701
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5457
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5252
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2874
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1539
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2574
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2097
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg440His
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD

19-48558276-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558276
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558276
    reference: chr 19
allele count: 109
allele frequency: 9.12576815525527e-4
allele num: 119442
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.544C>T
  hgvsp: ENSP00000470418.1:p.Arg182Cys
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.41C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1288C>T
  hgvsp: ENSP00000400036.2:p.Arg430Cys
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.998C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1318C>T
  hgvsp: ENSP00000472546.1:p.Arg440Cys
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.327C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1288C>T
  hgvsp: ENSP00000469473.1:p.Arg430Cys
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1288C>T
  hgvsp: ENSP00000346228.2:p.Arg430Cys
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5949
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4593
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5447
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7337
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6803
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5195
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2607
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 9.75e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5878
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1367
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg440Cys
num of homozygotes: 1
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

19-48558278-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558278
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558278
    reference: chr 19
allele count: 3
allele frequency: 2.515048372763703e-5
allele num: 119282
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.39G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.542G>A
  hgvsp: ENSP00000470418.1:p.Arg181His
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.325G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1286G>A
  hgvsp: ENSP00000400036.2:p.Arg429His
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1316G>A
  hgvsp: ENSP00000472546.1:p.Arg439His
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1286G>A
  hgvsp: ENSP00000346228.2:p.Arg429His
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.996G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1286G>A
  hgvsp: ENSP00000469473.1:p.Arg429His
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4515
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5942
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7192
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5463
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5138
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2018
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1536
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg439His
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

19-48558279-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558279
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558279
    reference: chr 19
allele count: 5
allele frequency: 4.190342099529006e-5
allele num: 119322
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1285C>T
  hgvsp: ENSP00000400036.2:p.Arg429Cys
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1315C>T
  hgvsp: ENSP00000472546.1:p.Arg439Cys
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1285C>T
  hgvsp: ENSP00000469473.1:p.Arg429Cys
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1285C>T
  hgvsp: ENSP00000346228.2:p.Arg429Cys
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.324C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.541C>T
  hgvsp: ENSP00000470418.1:p.Arg181Cys
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.38C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.995C>T
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2607
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5462
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6815
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38373
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5799
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg439Cys
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS

19-48558279-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558279
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558279
    reference: chr 19
allele count: 2
allele frequency: 1.676136839811602e-5
allele num: 119322
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1285C>G
  hgvsp: ENSP00000400036.2:p.Arg429Gly
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.541C>G
  hgvsp: ENSP00000470418.1:p.Arg181Gly
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1315C>G
  hgvsp: ENSP00000472546.1:p.Arg439Gly
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.324C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1285C>G
  hgvsp: ENSP00000346228.2:p.Arg429Gly
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.995C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.38C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1285C>G
  hgvsp: ENSP00000469473.1:p.Arg429Gly
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2607
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6815
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5462
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5799
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2645
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2066
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1348
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2278
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg439Gly
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-48558283-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558283
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558283
    reference: chr 19
allele count: 1
allele frequency: 8.420627168311495e-6
allele num: 118756
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1281C>A
  hgvsp: ENSP00000346228.2:p.Tyr427Ter
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.320C>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1311C>A
  hgvsp: ENSP00000472546.1:p.Tyr437Ter
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.34C>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1281C>A
  hgvsp: ENSP00000469473.1:p.Tyr427Ter
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.537C>A
  hgvsp: ENSP00000470418.1:p.Tyr179Ter
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1281C>A
  hgvsp: ENSP00000400036.2:p.Tyr427Ter
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.991C>A
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6814
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5932
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4132
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7187
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3924
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2607
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2272
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2090
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2376
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Tyr437Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD

19-48558286-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558286
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558286
    reference: chr 19
allele count: 22747
allele frequency: 1.915214279700261e-1
allele num: 118770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.988C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1278C>T
  hgvsp: ENST00000599921.1:c.1278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.31C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1278C>T
  hgvsp: ENST00000354276.3:c.1278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1308C>T
  hgvsp: ENST00000599111.1:c.1308C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.534C>T
  hgvsp: ENST00000599300.1:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1278C>T
  hgvsp: ENST00000413144.2:c.1278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.317C>T
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 7.25e1
  variant carriers: 461
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 6.25e1
  variant carriers: 321
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 3.25e1
  variant carriers: 273
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 7.5e0
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 1.25e1
  variant carriers: 425
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5085
  bin: 4.25e1
  variant carriers: 252
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 2.25e1
  variant carriers: 649
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 6.75e1
  variant carriers: 413
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 8.75e1
  variant carriers: 853
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 2.75e1
  variant carriers: 369
genotype depth: GenotypeDepth
  all individuals: 5118
  bin: 4.75e1
  variant carriers: 236
genotype depth: GenotypeDepth
  all individuals: 3869
  bin: 5.75e1
  variant carriers: 284
genotype depth: GenotypeDepth
  all individuals: 4391
  bin: 3.75e1
  variant carriers: 265
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 9.25e1
  variant carriers: 922
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 1.75e1
  variant carriers: 696
genotype depth: GenotypeDepth
  all individuals: 4638
  bin: 5.25e1
  variant carriers: 209
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 8.25e1
  variant carriers: 739
genotype depth: GenotypeDepth
  all individuals: 12693
  bin: 9.75e1
  variant carriers: 12237
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 7.75e1
  variant carriers: 606
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 3.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 4383
  bin: 6.25e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 1589
  bin: 7.75e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.75e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 7.5e0
  variant carriers: 2
hgvs: p.Asp436Asp
num of homozygotes: 2541
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

19-48558299-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558299
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558299
    reference: chr 19
allele count: 19
allele frequency: 1.638298239260524e-4
allele num: 115974
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1265G>A
  hgvsp: ENSP00000469473.1:p.Arg422Gln
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.521G>A
  hgvsp: ENSP00000470418.1:p.Arg174Gln
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.18G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.975G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1295G>A
  hgvsp: ENSP00000472546.1:p.Arg432Gln
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.304G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1265G>A
  hgvsp: ENSP00000400036.2:p.Arg422Gln
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1265G>A
  hgvsp: ENSP00000346228.2:p.Arg422Gln
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6878
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6708
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2578
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5925
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4068
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6119
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2975
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg432Gln
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP

19-48558300-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558300
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558300
    reference: chr 19
allele count: 1
allele frequency: 8.630212648439658e-6
allele num: 115872
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1294C>T
  hgvsp: ENSP00000472546.1:p.Arg432Trp
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.17C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1264C>T
  hgvsp: ENSP00000400036.2:p.Arg422Trp
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.974C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.520C>T
  hgvsp: ENSP00000470418.1:p.Arg174Trp
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1264C>T
  hgvsp: ENSP00000346228.2:p.Arg422Trp
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.303C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1264C>T
  hgvsp: ENSP00000469473.1:p.Arg422Trp
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6708
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6883
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5929
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4165
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5342
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2451
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2924
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg432Trp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff

19-48558300-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558300
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558300
    reference: chr 19
allele count: 8
allele frequency: 6.904170118751726e-5
allele num: 115872
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.974C>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1264C>A
  hgvsp: ENST00000413144.2:c.1264C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.303C>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.17C>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1264C>A
  hgvsp: ENST00000599921.1:c.1264C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1294C>A
  hgvsp: ENST00000599111.1:c.1294C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.520C>A
  hgvsp: ENST00000599300.1:c.520C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1264C>A
  hgvsp: ENST00000354276.3:c.1264C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6883
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4165
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6708
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5342
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6260
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5929
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1656
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6094
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4123
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg432Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-48558309-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558309
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558309
    reference: chr 19
allele count: 3
allele frequency: 2.615838027309349e-5
allele num: 114686
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.514-3C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1258-3C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1288-3C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1258-3C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1258-3C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.8C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.968-3C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.297-3C>T
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6878
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5927
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34537
  bin: 9.75e1
  variant carriers: 3
hgvs: c.1288-3C>T
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

19-48558309-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558309
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558309
    reference: chr 19
allele count: 1
allele frequency: 8.719460091031163e-6
allele num: 114686
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1288-3C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1258-3C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.968-3C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1258-3C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1258-3C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.514-3C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000594790
  gene symbol: PLA2G4C
  hgvsc: ENST00000594790.1:n.8C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.297-3C>G
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5927
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6878
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1654
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3915
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
hgvs: c.1288-3C>G
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ

19-48558319-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558319
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558319
    reference: chr 19
allele count: 1
allele frequency: 8.836576356856299e-6
allele num: 113166
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1258-13G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1258-13G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.297-13G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.514-13G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1288-13G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1258-13G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.968-13G>A
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3797
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6878
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6709
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34521
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2645
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3344
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD

19-48558325-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558325
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558325
    reference: chr 19
allele count: 2
allele frequency: 1.776640727712042e-5
allele num: 112572
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1288-19C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.968-19C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1258-19C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1258-19C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1258-19C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.514-19C>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.297-19C>G
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6876
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3596
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6706
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5180
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2893
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1999
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1650
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2639
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP

19-48558329-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558329
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558329
    reference: chr 19
allele count: 2
allele frequency: 1.784471528756759e-5
allele num: 112078
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1258-23A>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1288-23A>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1258-23A>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.968-23A>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.297-23A>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1258-23A>G
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.514-23A>G
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3785
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5178
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1548
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2727
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5901
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5137
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1482
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2470
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2964
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2219
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-48558331-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558331
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558331
    reference: chr 19
allele count: 1
allele frequency: 8.933037947545201e-6
allele num: 111944
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1288-25C>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.297-25C>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1258-25C>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1258-25C>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1258-25C>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.968-25C>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.514-25C>A
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5889
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5097
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6710
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5181
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3366
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2292
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2418
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1488
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2303
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

19-48558340-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558340
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558340
    reference: chr 19
allele count: 1
allele frequency: 9.049118615846816e-6
allele num: 110508
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1258-34G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1258-34G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1258-34G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.297-34G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1288-34G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.514-34G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.968-34G>A
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6844
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4789
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2727
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2229
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2367
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff

19-48558341-CTCTCCA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558341
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558335
    reference: chr 19
allele count: 1
allele frequency: 9.064868196816419e-6
allele num: 110316
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1258-41_1258-36delTGGAGA
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1288-41_1288-36delTGGAGA
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.297-41_297-36delTGGAGA
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1258-41_1258-36delTGGAGA
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.514-41_514-36delTGGAGA
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1258-41_1258-36delTGGAGA
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.968-41_968-36delTGGAGA
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5809
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6654
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6845
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2715
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2158
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2307
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2557
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2922
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3000
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: CTCTCCA
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ

19-48558342-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558342
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558342
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 108002
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.297-36A>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1258-36A>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1258-36A>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.968-36A>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1288-36A>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.514-36A>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1258-36A>C
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6391
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3701
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8477
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1057
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1378
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 948
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: T
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

19-48558342-TCTCCAGAAGACCC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558342
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558329
    reference: chr 19
allele count: 66799
allele frequency: 6.184978055961927e-1
allele num: 108002
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 7.25e1
  variant carriers: 466
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 4.75e1
  variant carriers: 4622
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 8560
  bin: 3.75e1
  variant carriers: 7275
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 1.25e1
  variant carriers: 1587
genotype depth: GenotypeDepth
  all individuals: 7130
  bin: 4.25e1
  variant carriers: 6067
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 223
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 2.25e1
  variant carriers: 3570
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 7.5e0
  variant carriers: 1587
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 6.75e1
  variant carriers: 751
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 2.5e0
  variant carriers: 943
genotype depth: GenotypeDepth
  all individuals: 8477
  bin: 3.25e1
  variant carriers: 6964
genotype depth: GenotypeDepth
  all individuals: 6391
  bin: 2.75e1
  variant carriers: 5422
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.75e1
  variant carriers: 116
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 139
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 1.75e1
  variant carriers: 2350
genotype depth: GenotypeDepth
  all individuals: 3701
  bin: 5.25e1
  variant carriers: 3118
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 5.75e1
  variant carriers: 2084
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 6.25e1
  variant carriers: 1301
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 2.75e1
  variant carriers: 333
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 2.25e1
  variant carriers: 447
genotype quality: GenotypeQuality
  all individuals: 1043
  bin: 8.25e1
  variant carriers: 456
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 4.75e1
  variant carriers: 287
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 1.75e1
  variant carriers: 670
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 1.25e1
  variant carriers: 506
genotype quality: GenotypeQuality
  all individuals: 44843
  bin: 9.75e1
  variant carriers: 42208
genotype quality: GenotypeQuality
  all individuals: 1030
  bin: 7.75e1
  variant carriers: 408
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 4.25e1
  variant carriers: 227
genotype quality: GenotypeQuality
  all individuals: 948
  bin: 2.5e0
  variant carriers: 101
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 7.25e1
  variant carriers: 332
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 3.25e1
  variant carriers: 226
num of homozygotes: 21030
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: TCTCCAGAAGACCC
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

19-48558343-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558343
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558343
    reference: chr 19
allele count: 1
allele frequency: 6.09979260705136e-5
allele num: 16394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.514-37G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1288-37G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1258-37G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1258-37G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.968-37G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.297-37G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1258-37G>A
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1163
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1434
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

19-48558344-TCCAGAAGACCC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558344
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558333
    reference: chr 19
allele count: 2
allele frequency: 5.74514535217741e-5
allele num: 34812
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2465
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1499
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: TCCAGAAGACCC
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS

http://identifiers.org/exac.variant/19-48558346-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558346
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558346
    reference: chr 19
allele count: 1
allele frequency: 2.952988424285377e-5
allele num: 33864
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1258-40G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.297-40G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1258-40G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.968-40G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1258-40G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1288-40G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.514-40G>T
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3992
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2582
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1150
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1454
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9782
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3356
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-48558348-GAAGACCC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558348
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558341
    reference: chr 19
allele count: 1
allele frequency: 3.948199620972836e-5
allele num: 25328
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1258-49_1258-43delGGGTCTT
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.297-49_297-43delGGGTCTT
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.514-49_514-43delGGGTCTT
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1258-49_1258-43delGGGTCTT
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.968-49_968-43delGGGTCTT
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1258-49_1258-43delGGGTCTT
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1288-49_1288-43delGGGTCTT
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5571
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: GAAGACCC
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum

19-48558351-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558351
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558350
    reference: chr 19
allele count: 1
allele frequency: 2.642007926023778e-5
allele num: 37850
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1258-46delT
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.514-46delT
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1258-46delT
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1288-46delT
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1258-46delT
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.297-46delT
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.968-46delT
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3841
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3017
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 878
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1022
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 879
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1461
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: GA
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD

19-48558355-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558355
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558355
    reference: chr 19
allele count: 30
allele frequency: 1.572656741455232e-3
allele num: 19076
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1258-49G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1258-49G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1258-49G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.297-49G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.514-49G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.968-49G>A
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1288-49G>A
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1125
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD

19-48558356-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558356
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558356
    reference: chr 19
allele count: 184
allele frequency: 1.143709597215316e-2
allele num: 16088
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1258-50G>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1258-50G>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1258-50G>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.514-50G>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1288-50G>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.297-50G>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.968-50G>C
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 4423
  bin: 4.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 4.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4633
  bin: 3.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 4275
  bin: 3.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 3200
  bin: 2.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26049
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 949
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ

19-48558357-TCC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48558357
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48558355
    reference: chr 19
allele count: 1
allele frequency: 9.219478915051721e-6
allele num: 108466
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.968-53_968-52delGG
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1258-53_1258-52delGG
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1258-53_1258-52delGG
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.297-53_297-52delGG
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.514-53_514-52delGG
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1288-53_1288-52delGG
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1258-53_1258-52delGG
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3573
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2972
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5315
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8060
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7508
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7363
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6023
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1043
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1088
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1987
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 941
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1804
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20989
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4198
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4045
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1222
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2114
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: TCC
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

19-48564621-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48564621
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48564621
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 10
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1257+634T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1257+634T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.513+634T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469528
  ensembl transcript: ENST00000595161
  gene symbol: PLA2G4C
  hgvsc: ENST00000595161.1:c.*43T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1257+634T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1287+634T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.967+634T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.296+634T>C
  variant of: http://identifiers.org/hgnc/9037
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

19-48564626-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48564626
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48564626
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 10
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.967+629A>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469528
  ensembl transcript: ENST00000595161
  gene symbol: PLA2G4C
  hgvsc: ENST00000595161.1:c.*38A>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1257+629A>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1257+629A>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.513+629A>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.296+629A>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1257+629A>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1287+629A>T
  variant of: http://identifiers.org/hgnc/9037
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 970
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2688
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-48564662-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48564662
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48564662
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 10
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469528
  ensembl transcript: ENST00000595161
  gene symbol: PLA2G4C
  hgvsc: ENST00000595161.1:c.*2G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1287+593G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1257+593G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269420
  ensembl transcript: ENST00000601548
  gene symbol: CTD-2265M8.2
  hgvsc: ENST00000601548.1:n.35C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.513+593G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1257+593G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1257+593G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.296+593G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.967+593G>T
  variant of: http://identifiers.org/hgnc/9037
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2757
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/19-48564690-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48564690
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48564690
    reference: chr 19
allele count: 1
allele frequency: 1.666666666666667e-1
allele num: 6
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269420
  ensembl transcript: ENST00000596552
  gene symbol: CTD-2265M8.2
  hgvsc: ENST00000596552.1:n.6C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.513+565G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1287+565G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1257+565G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469528
  ensembl transcript: ENST00000595161
  gene symbol: PLA2G4C
  hgvsc: ENST00000595161.1:c.365G>T
  hgvsp: ENSP00000469528.1:p.Val123Phe
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.296+565G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1257+565G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.967+565G>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269420
  ensembl transcript: ENST00000601548
  gene symbol: CTD-2265M8.2
  hgvsc: ENST00000601548.1:n.63C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1257+565G>T
  variant of: http://identifiers.org/hgnc/9037
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3389
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val123Phe
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP

19-48564701-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48564701
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48564701
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 6
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1287+554T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1257+554T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469528
  ensembl transcript: ENST00000595161
  gene symbol: PLA2G4C
  hgvsc: ENST00000595161.1:c.356-2T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1257+554T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269420
  ensembl transcript: ENST00000601548
  gene symbol: CTD-2265M8.2
  hgvsc: ENST00000601548.1:n.74A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.296+554T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269420
  ensembl transcript: ENST00000601950
  gene symbol: CTD-2265M8.2
  hgvsc: ENST00000601950.1:n.7A>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269420
  ensembl transcript: ENST00000596552
  gene symbol: CTD-2265M8.2
  hgvsc: ENST00000596552.1:n.17A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1257+554T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.513+554T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.967+554T>C
  variant of: http://identifiers.org/hgnc/9037
canonical: false
consequence: splice acceptor
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3609
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: c.356-2T>C
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

19-48564712-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48564712
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48564712
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 4
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1257+543T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.513+543T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269420
  ensembl transcript: ENST00000601548
  gene symbol: CTD-2265M8.2
  hgvsc: ENST00000601548.1:n.85A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1257+543T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269420
  ensembl transcript: ENST00000596552
  gene symbol: CTD-2265M8.2
  hgvsc: ENST00000596552.1:n.28A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.296+543T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269420
  ensembl transcript: ENST00000601950
  gene symbol: CTD-2265M8.2
  hgvsc: ENST00000601950.1:n.18A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469528
  ensembl transcript: ENST00000595161
  gene symbol: PLA2G4C
  hgvsc: ENST00000595161.1:c.356-13T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1287+543T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1257+543T>C
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.967+543T>C
  variant of: http://identifiers.org/hgnc/9037
canonical: true
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

19-48565025-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48565025
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48565024
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 4216
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000599239
  gene symbol: PLA2G4C
  hgvsc: ENST00000599239.1:n.742delT
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1257+229delT
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.513+229delT
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1287+229delT
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469528
  ensembl transcript: ENST00000595161
  gene symbol: PLA2G4C
  hgvsc: ENST00000595161.1:c.355+36delT
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.967+229delT
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269420
  ensembl transcript: ENST00000596552
  gene symbol: CTD-2265M8.2
  hgvsc: ENST00000596552.1:n.122+82delA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1257+229delT
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1257+229delT
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269420
  ensembl transcript: ENST00000601950
  gene symbol: CTD-2265M8.2
  hgvsc: ENST00000601950.1:n.144+82delA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269420
  ensembl transcript: ENST00000601548
  gene symbol: CTD-2265M8.2
  hgvsc: ENST00000601548.1:n.179+82delA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.296+229delT
  variant of: http://identifiers.org/hgnc/9037
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35182
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14764
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: GA
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-48565028-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 48565028
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 48565028
    reference: chr 19
allele count: 1
allele frequency: 2.324500232450023e-4
allele num: 4302
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269420
  ensembl transcript: ENST00000596552
  gene symbol: CTD-2265M8.2
  hgvsc: ENST00000596552.1:n.122+83G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469528
  ensembl transcript: ENST00000595161
  gene symbol: PLA2G4C
  hgvsc: ENST00000595161.1:c.355+34C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596510
  gene symbol: PLA2G4C
  hgvsc: ENST00000596510.1:n.967+227C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000472546
  ensembl transcript: ENST00000599111
  gene symbol: PLA2G4C
  hgvsc: ENST00000599111.1:c.1287+227C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269420
  ensembl transcript: ENST00000601950
  gene symbol: CTD-2265M8.2
  hgvsc: ENST00000601950.1:n.144+83G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000599239
  gene symbol: PLA2G4C
  hgvsc: ENST00000599239.1:n.740C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000400036
  ensembl transcript: ENST00000413144
  gene symbol: PLA2G4C
  hgvsc: ENST00000413144.2:c.1257+227C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl transcript: ENST00000596353
  gene symbol: PLA2G4C
  hgvsc: ENST00000596353.1:n.296+227C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269420
  ensembl transcript: ENST00000601548
  gene symbol: CTD-2265M8.2
  hgvsc: ENST00000601548.1:n.179+83G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000470418
  ensembl transcript: ENST00000599300
  gene symbol: PLA2G4C
  hgvsc: ENST00000599300.1:c.513+227C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000346228
  ensembl transcript: ENST00000354276
  gene symbol: PLA2G4C
  hgvsc: ENST00000354276.3:c.1257+227C>T
  variant of: http://identifiers.org/hgnc/9037
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105499
  ensembl protein: ENSP00000469473
  ensembl transcript: ENST00000599921
  gene symbol: PLA2G4C
  hgvsc: ENST00000599921.1:c.1257+227C>T
  variant of: http://identifiers.org/hgnc/9037
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15835
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34359
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 8134
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2134
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1479
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.703085581214826e-5
allele num: 10306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.172e0

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

FS
type: SiteQuality
SIO_000300: 1.624e1

DP
type: SiteQuality
SIO_000300: 2.826272e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.9e-1

QD
type: SiteQuality
SIO_000300: 9.970000000000001e0

MQ
type: SiteQuality
SIO_000300: 5.855e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.41e0

GenotypeQuality
all individuals: 2600
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8236
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2316
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502629601803156e-5
allele num: 66550
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.768e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e0

DP
type: SiteQuality
SIO_000300: 2.827767e6

FS
type: SiteQuality
SIO_000300: 7.897e0

MQRankSum
type: SiteQuality
SIO_000300: 2.76e-1

QD
type: SiteQuality
SIO_000300: 1.229e1

MQ
type: SiteQuality
SIO_000300: 5.924e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8236
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2940
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2600
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e0

QD
type: SiteQuality
SIO_000300: 1.229e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

FS
type: SiteQuality
SIO_000300: 7.897e0

DP
type: SiteQuality
SIO_000300: 2.827767e6

VQSLOD
type: SiteQuality
SIO_000300: -8.768e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

GenotypeQuality
all individuals: 157
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1553
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2602
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38957
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2936
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8303
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.591e0

VQSLOD
type: SiteQuality
SIO_000300: 6.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.43e-1

MQ
type: SiteQuality
SIO_000300: 5.899e1

FS
type: SiteQuality
SIO_000300: 2.633e0

DP
type: SiteQuality
SIO_000300: 2.828796e6

MQRankSum
type: SiteQuality
SIO_000300: 1.25e0

QD
type: SiteQuality
SIO_000300: 1.071e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.072e0

GenotypeQuality
all individuals: 2601
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8410
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2140
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38960
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1491
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2949
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729206294310911e-4
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66592
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.830117e6

QD
type: SiteQuality
SIO_000300: 1.068e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.813e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQRankSum
type: SiteQuality
SIO_000300: 8.64e-1

FS
type: SiteQuality
SIO_000300: 9.063000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 93
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1552
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2955
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2319
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38962
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500600240096038e-5
allele num: 66640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.922e1

VQSLOD
type: SiteQuality
SIO_000300: 3.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.53e-1

QD
type: SiteQuality
SIO_000300: 1.225e1

DP
type: SiteQuality
SIO_000300: 2.831295e6

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2146
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38962
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2603
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66646
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211827435773146e-4
allele num: 16504
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.831424e6

MQ
type: SiteQuality
SIO_000300: 5.979e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e0

FS
type: SiteQuality
SIO_000300: 6.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 7.94e-1

QD
type: SiteQuality
SIO_000300: 1.204e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.17e0

MQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.81e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 38961
bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1552
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2318
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.001680470531749e-5
allele num: 66648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.57e-1

FS
type: SiteQuality
SIO_000300: 1.831e0

QD
type: SiteQuality
SIO_000300: 1.144e1

MQ
type: SiteQuality
SIO_000300: 5.957e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.88e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

DP
type: SiteQuality
SIO_000300: 2.831756e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.876e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2603
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.537205081669691e-4
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.001170152119776e-5
allele num: 66658
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.64e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.832489e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.53e-1

FS
type: SiteQuality
SIO_000300: 1.165e0

QD
type: SiteQuality
SIO_000300: 1.261e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.120000000000001e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2425

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 1491
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variant carriers: 1

GenotypeQuality
all individuals: 2197
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variant carriers: 0

GenotypeQuality
all individuals: 2053
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 8322
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2871
bin: 6.75e1
variant carriers: 1

South Asian
type: Population
allele count: 7
allele frequency: 4.240368306275745e-4
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 125
allele frequency: 1.874906254687266e-3
allele num: 66670
num of homozygotes: 0

African
type: Population
allele count: 2470
allele frequency: 2.379576107899807e-1
allele num: 10380
num of homozygotes: 307

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 134
allele frequency: 1.157967507777394e-2
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.207505518763797e-3
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

QD
type: SiteQuality
SIO_000300: 1.585e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.28e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

VQSLOD
type: SiteQuality
SIO_000300: 7.02e0

DP
type: SiteQuality
SIO_000300: 2.98685e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.986e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.43e0

GenotypeQuality
all individuals: 2193
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.999520038396928e-5
allele num: 66672
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.602e0

MQ
type: SiteQuality
SIO_000300: 5.917e1

FS
type: SiteQuality
SIO_000300: 4.158e0

DP
type: SiteQuality
SIO_000300: 2.831672e6

QD
type: SiteQuality
SIO_000300: 1.155e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1544
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 2.849002849002849e-4
allele num: 66690
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.301e1

DP
type: SiteQuality
SIO_000300: 2.833524e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.99e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

VQSLOD
type: SiteQuality
SIO_000300: 2.23e0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 8851
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

FS
type: SiteQuality
SIO_000300: 3.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

DP
type: SiteQuality
SIO_000300: 2.833353e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.35e-1

QD
type: SiteQuality
SIO_000300: 1.059e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.83e0

MQ
type: SiteQuality
SIO_000300: 5.929e1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2319
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variant carriers: 0

GenotypeQuality
all individuals: 1516
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variant carriers: 0

GenotypeQuality
all individuals: 2194
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.6e-1

MQ
type: SiteQuality
SIO_000300: 5.909e1

DP
type: SiteQuality
SIO_000300: 2.833608e6

VQSLOD
type: SiteQuality
SIO_000300: 3.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 5.25e-1

QD
type: SiteQuality
SIO_000300: 1.144e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.293e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.93e-1

GenotypeQuality
all individuals: 1516
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8864
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1544
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.6e-1

QD
type: SiteQuality
SIO_000300: 1.144e1

FS
type: SiteQuality
SIO_000300: 5.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.293e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.9e-2

MQ
type: SiteQuality
SIO_000300: 5.909e1

DP
type: SiteQuality
SIO_000300: 2.833608e6

VQSLOD
type: SiteQuality
SIO_000300: 3.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.93e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.284e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.01e0

DP
type: SiteQuality
SIO_000300: 2.83369e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.934e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.931e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.36e-1

FS
type: SiteQuality
SIO_000300: 6.12e-1

QD
type: SiteQuality
SIO_000300: 1.098e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.76e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQRankSum
type: SiteQuality
SIO_000300: 6.06e-1

QD
type: SiteQuality
SIO_000300: 1.355e1

DP
type: SiteQuality
SIO_000300: 2.83394e6

MQ
type: SiteQuality
SIO_000300: 5.907e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66680
num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
allele num: 10400
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East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.71e-1

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.833517e6

MQ
type: SiteQuality
SIO_000300: 5.792e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 85
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.819725827975252e-4
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 7.499625018749062e-5
allele num: 66670
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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MQ
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BaseQRankSum
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QD
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VQSLOD
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FS
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 1.499925003749813e-5
allele num: 66670
num of homozygotes: 0

South Asian
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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Latino
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allele frequency: 0.0e0
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Other
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VQSLOD
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ClippingRankSum
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FS
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DP
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InbreedingCoeff
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MQ
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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African
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allele num: 10398
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Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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ReadPosRankSum
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QD
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InbreedingCoeff
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DP
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MQ
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MQRankSum
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VQSLOD
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BaseQRankSum
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Latino
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East Asian
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European (Non-Finnish)
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Other
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African
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South Asian
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VQSLOD
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ReadPosRankSum
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MQRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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DP
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FS
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 3.000750187546887e-5
allele num: 66650
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ClippingRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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MQ
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MQRankSum
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VQSLOD
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DP
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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South Asian
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East Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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DP
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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allele frequency: 4.160887656033287e-3
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European (Non-Finnish)
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African
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European (Finnish)
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Latino
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South Asian
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BaseQRankSum
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VQSLOD
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FS
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DP
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MQ
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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East Asian
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African
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Other
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Latino
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European (Non-Finnish)
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QD
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ReadPosRankSum
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VQSLOD
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FS
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InbreedingCoeff
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MQRankSum
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DP
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BaseQRankSum
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Other
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European (Non-Finnish)
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South Asian
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European (Finnish)
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Latino
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VQSLOD
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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FS
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ClippingRankSum
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ReadPosRankSum
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DP
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

Other
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allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.221597849987784e-4
allele num: 16372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.867e1

VQSLOD
type: SiteQuality
SIO_000300: 2.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

FS
type: SiteQuality
SIO_000300: 3.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.829938e6

QD
type: SiteQuality
SIO_000300: 1.306e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16354
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.5008254539997e-5
allele num: 66630
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
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MQ
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ClippingRankSum
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MQRankSum
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FS
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InbreedingCoeff
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16350
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.50073536032656e-5
allele num: 66634
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.222e1

InbreedingCoeff
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SIO_000300: -1.0e-4

DP
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.93e-1

MQRankSum
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SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501231009427731e-5
allele num: 66612
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16268
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.6e0

FS
type: SiteQuality
SIO_000300: 1.699e0

MQ
type: SiteQuality
SIO_000300: 5.768e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.826964e6

MQRankSum
type: SiteQuality
SIO_000300: 1.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.120000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.175e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.4e0

QD
type: SiteQuality
SIO_000300: 1.271e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16230
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.885725278953444e-4
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.825822e6

MQRankSum
type: SiteQuality
SIO_000300: 9.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.91e-1

QD
type: SiteQuality
SIO_000300: 1.245e1

MQ
type: SiteQuality
SIO_000300: 5.888e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

FS
type: SiteQuality
SIO_000300: 1.103e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.641e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16176
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501681883709755e-5
allele num: 66592
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.48e0

VQSLOD
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DP
type: SiteQuality
SIO_000300: 2.82421e6

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.91e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.815e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.3e-1

QD
type: SiteQuality
SIO_000300: 3.04e0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.003814844852963e-5
allele num: 66582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16144
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.822888e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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QD
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FS
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MQRankSum
type: SiteQuality
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ClippingRankSum
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SIO_000300: -9.8e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele num: 66572
num of homozygotes: 0

East Asian
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allele num: 8648
num of homozygotes: 0

South Asian
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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QD
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DP
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BaseQRankSum
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FS
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MQ
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 2
allele frequency: 1.933114247052001e-4
allele num: 10346
num of homozygotes: 0

South Asian
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allele frequency: 1.315097317201473e-4
allele num: 15208
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.020965500573983e-5
allele num: 66204
num of homozygotes: 0

East Asian
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allele num: 8640
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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MQRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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MQ
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DP
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2638
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1537
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510163399679845e-5
allele num: 66218
num of homozygotes: 0

East Asian
type: Population
allele count: 67
allele frequency: 7.75462962962963e-3
allele num: 8640
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

South Asian
type: Population
allele count: 41
allele frequency: 2.699855129724746e-3
allele num: 15186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.585e-1

FS
type: SiteQuality
SIO_000300: 1.165e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.465e0

QD
type: SiteQuality
SIO_000300: 1.263e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.87e-2

DP
type: SiteQuality
SIO_000300: 2.795125e6

MQ
type: SiteQuality
SIO_000300: 5.833e1

GenotypeQuality
all individuals: 2644
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2523
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5678
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2279
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1353
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.533365570599613e-5
allele num: 66176
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.27e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.915e-1

DP
type: SiteQuality
SIO_000300: 2.783963e6

MQ
type: SiteQuality
SIO_000300: 5.826e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

QD
type: SiteQuality
SIO_000300: 1.142e1

FS
type: SiteQuality
SIO_000300: 5.613e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.371e0

GenotypeQuality
all individuals: 1348
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1543
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2066
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2645
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2278
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2095
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.325029813170796e-4
allele num: 15094
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.532543663503958e-5
allele num: 66188
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.076e-1

DP
type: SiteQuality
SIO_000300: 2.783488e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

MQ
type: SiteQuality
SIO_000300: 5.813e1

QD
type: SiteQuality
SIO_000300: 1.286e1

MQRankSum
type: SiteQuality
SIO_000300: 8.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

FS
type: SiteQuality
SIO_000300: 3.49e0

GenotypeQuality
all individuals: 188
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2535
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2095
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38373
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 367
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1543
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.021695775669306e-5
allele num: 66188
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.49e0

MQ
type: SiteQuality
SIO_000300: 5.813e1

VQSLOD
type: SiteQuality
SIO_000300: -8.076e-1

QD
type: SiteQuality
SIO_000300: 1.286e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

DP
type: SiteQuality
SIO_000300: 2.783488e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-1

GenotypeQuality
all individuals: 38372
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 211
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2644
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1323
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4958
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1543
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2407
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513683700653911e-5
allele num: 66064
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14680
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.767e0

MQRankSum
type: SiteQuality
SIO_000300: 9.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.51e-1

FS
type: SiteQuality
SIO_000300: 4.135e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
SIO_000300: 2.774489e6

QD
type: SiteQuality
SIO_000300: 1.53e0

GenotypeQuality
all individuals: 1144
bin: 8.75e1
variant carriers: 25

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 43516
bin: 9.75e1
variant carriers: 19833

GenotypeQuality
all individuals: 1740
bin: 8.25e1
variant carriers: 33

GenotypeQuality
all individuals: 223
bin: 2.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1013
bin: 7.25e1
variant carriers: 37

GenotypeQuality
all individuals: 2216
bin: 2.25e1
variant carriers: 10

GenotypeQuality
all individuals: 2061
bin: 9.25e1
variant carriers: 27

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 44

GenotypeQuality
all individuals: 95
bin: 5.25e1
variant carriers: 49

GenotypeQuality
all individuals: 1927
bin: 6.75e1
variant carriers: 34

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 17

GenotypeQuality
all individuals: 73
bin: 4.25e1
variant carriers: 26

Latino
type: Population
allele count: 1873
allele frequency: 1.621645021645022e-1
allele num: 11550
num of homozygotes: 177

African
type: Population
allele count: 439
allele frequency: 4.248935346496322e-2
allele num: 10332
num of homozygotes: 9

Other
type: Population
allele count: 156
allele frequency: 1.780821917808219e-1
allele num: 876
num of homozygotes: 17

South Asian
type: Population
allele count: 3163
allele frequency: 2.149069167006387e-1
allele num: 14718
num of homozygotes: 337

European (Non-Finnish)
type: Population
allele count: 15666
allele frequency: 2.371767698177194e-1
allele num: 66052
num of homozygotes: 1870

East Asian
type: Population
allele count: 112
allele frequency: 1.297798377752028e-2
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1338
allele frequency: 2.023593466424682e-1
allele num: 6612
num of homozygotes: 131

ClippingRankSum
type: SiteQuality
SIO_000300: -5.44e-1

QD
type: SiteQuality
SIO_000300: 1.543e1

MQRankSum
type: SiteQuality
SIO_000300: 6.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.97e-2

DP
type: SiteQuality
SIO_000300: 3.85865e6

FS
type: SiteQuality
SIO_000300: 6.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 7.53e-1

MQ
type: SiteQuality
SIO_000300: 5.885e1

GenotypeQuality
all individuals: 1531
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2653
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
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variant carriers: 0

GenotypeQuality
all individuals: 428
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variant carriers: 0

GenotypeQuality
all individuals: 351
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variant carriers: 0

GenotypeQuality
all individuals: 2926
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1652
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2452
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34564
bin: 9.75e1
variant carriers: 19

GenotypeQuality
all individuals: 309
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 5
allele frequency: 4.863813229571985e-4
allele num: 10280
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12768
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.684274996172102e-4
allele num: 65310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.601005722212589e-4
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

MQRankSum
type: SiteQuality
SIO_000300: 1.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.56e-2

FS
type: SiteQuality
SIO_000300: 7.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.33e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.36e-1

MQ
type: SiteQuality
SIO_000300: 5.725e1

DP
type: SiteQuality
SIO_000300: 2.755861e6

GenotypeQuality
all individuals: 2976
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34540
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 69
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2655
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
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variant carriers: 0

GenotypeQuality
all individuals: 1530
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1656
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 351
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variant carriers: 0

GenotypeQuality
all individuals: 4123
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6094
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12686
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.477e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-2

FS
type: SiteQuality
SIO_000300: 7.43e-1

MQ
type: SiteQuality
SIO_000300: 5.705e1

MQRankSum
type: SiteQuality
SIO_000300: 1.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.939e0

QD
type: SiteQuality
SIO_000300: 1.265e1

DP
type: SiteQuality
SIO_000300: 2.752881e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

GenotypeQuality
all individuals: 1530
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2924
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2655
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34540
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 469
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2976
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2451
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.731413001167769e-5
allele num: 10276
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12686
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.072074003736944e-4
allele num: 65294
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.477e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.939e0

FS
type: SiteQuality
SIO_000300: 7.43e-1

MQ
type: SiteQuality
SIO_000300: 5.705e1

QD
type: SiteQuality
SIO_000300: 1.265e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.18e-1

DP
type: SiteQuality
SIO_000300: 2.752881e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-2

GenotypeQuality
all individuals: 2442
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.615526631588664e-5
allele num: 64998
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.752e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

QD
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SIO_000300: 1.085e1

DP
type: SiteQuality
SIO_000300: 2.742359e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.099e0

MQ
type: SiteQuality
SIO_000300: 5.64e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538508877196221e-5
allele num: 64998
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11838
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.085e1

VQSLOD
type: SiteQuality
SIO_000300: -1.099e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.752e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

DP
type: SiteQuality
SIO_000300: 2.742359e6

MQ
type: SiteQuality
SIO_000300: 5.64e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.242144177449168e-5
allele num: 10820
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10218
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.84e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.878e0

MQ
type: SiteQuality
SIO_000300: 5.875e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -9.167999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.84e-1

DP
type: SiteQuality
SIO_000300: 2.730325e6

QD
type: SiteQuality
SIO_000300: 1.29e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 34513
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.103951330043145e-5
allele num: 64434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10190
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.55e0

QD
type: SiteQuality
SIO_000300: 1.592e1

VQSLOD
type: SiteQuality
SIO_000300: -1.028e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.97e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.114e0

FS
type: SiteQuality
SIO_000300: 1.541e0

MQ
type: SiteQuality
SIO_000300: 5.299e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.14e-1

DP
type: SiteQuality
SIO_000300: 2.722123e6

GenotypeQuality
all individuals: 34508
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4863
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GenotypeQuality
all individuals: 1646
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10162
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.334812047630166e-4
allele num: 8566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64290
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.064e0

DP
type: SiteQuality
SIO_000300: 2.7168e6

MQRankSum
type: SiteQuality
SIO_000300: 6.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.422e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

MQ
type: SiteQuality
SIO_000300: 5.255e1

QD
type: SiteQuality
SIO_000300: 1.235e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.580000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.42e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2976
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10046
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10162
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.703220191470844e-5
allele num: 11490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64258
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.269e0

DP
type: SiteQuality
SIO_000300: 2.713712e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.483e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.066e0

VQSLOD
type: SiteQuality
SIO_000300: -1.658e0

QD
type: SiteQuality
SIO_000300: 1.237e1

MQRankSum
type: SiteQuality
SIO_000300: 6.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.78e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1618
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10022
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.572821642025794e-5
allele num: 63580
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.232e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.195e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.4e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.523e0

DP
type: SiteQuality
SIO_000300: 2.699841e6

QD
type: SiteQuality
SIO_000300: 1.295e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1353
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10002
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63476
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.175088131609871e-4
allele num: 8510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.38e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.085e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.165e0

DP
type: SiteQuality
SIO_000300: 2.699606e6

MQ
type: SiteQuality
SIO_000300: 5.25e1

GenotypeQuality
all individuals: 308
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1030
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1809
bin: 6.25e1
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GenotypeQuality
all individuals: 1043
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62294
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9116
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11210
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8342
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.094722e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.19e0

MQRankSum
type: SiteQuality
SIO_000300: -3.266e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.43e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.57e-1

MQ
type: SiteQuality
SIO_000300: 5.102e1

GenotypeQuality
all individuals: 1378
bin: 7.5e0
variant carriers: 101

GenotypeQuality
all individuals: 1115
bin: 6.75e1
variant carriers: 327

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
all individuals: 780
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variant carriers: 465

GenotypeQuality
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bin: 9.25e1
variant carriers: 521

GenotypeQuality
all individuals: 299
bin: 3.75e1
variant carriers: 228

GenotypeQuality
all individuals: 291
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variant carriers: 265

GenotypeQuality
all individuals: 308
bin: 5.75e1
variant carriers: 291

East Asian
type: Population
allele count: 6959
allele frequency: 8.342124190841524e-1
allele num: 8342
num of homozygotes: 2897

Other
type: Population
allele count: 524
allele frequency: 6.717948717948717e-1
allele num: 780
num of homozygotes: 180

European (Finnish)
type: Population
allele count: 4275
allele frequency: 6.550720196138523e-1
allele num: 6526
num of homozygotes: 1390

African
type: Population
allele count: 3627
allele frequency: 3.726114649681528e-1
allele num: 9734
num of homozygotes: 668

South Asian
type: Population
allele count: 5882
allele frequency: 6.452391399736727e-1
allele num: 9116
num of homozygotes: 1899

European (Non-Finnish)
type: Population
allele count: 37979
allele frequency: 6.096734838026134e-1
allele num: 62294
num of homozygotes: 11496

Latino
type: Population
allele count: 7553
allele frequency: 6.737734165923283e-1
allele num: 11210
num of homozygotes: 2500

MQRankSum
type: SiteQuality
SIO_000300: -3.266e0

DP
type: SiteQuality
SIO_000300: 2.094722e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.43e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.57e-1

MQ
type: SiteQuality
SIO_000300: 5.102e1

QD
type: SiteQuality
SIO_000300: 7.19e0

GenotypeQuality
all individuals: 185
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2638
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 777
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 216
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1126
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.073652566029633e-4
allele num: 9314
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3792
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1104
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.411e1

FS
type: SiteQuality
SIO_000300: 7.06e0

VQSLOD
type: SiteQuality
SIO_000300: -1.744e0

MQRankSum
type: SiteQuality
SIO_000300: 1.63e0

QD
type: SiteQuality
SIO_000300: 2.736e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.68e-1

DP
type: SiteQuality
SIO_000300: 3.33645e5

GenotypeQuality
all individuals: 1195
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1460
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 943
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1030
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3385
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1000
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1896
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.840942562592047e-4
allele num: 5432
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.293807641633729e-4
allele num: 3036
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20450
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2776
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.55e0

DP
type: SiteQuality
SIO_000300: 1.023417e6

QD
type: SiteQuality
SIO_000300: 3.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.58e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.443e0

MQ
type: SiteQuality
SIO_000300: 5.05e1

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 825
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2280
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 931
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.836210062431142e-4
allele num: 5446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1834
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2914
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19776
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1056
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.595e1

MQ
type: SiteQuality
SIO_000300: 5.398e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 9.90696e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.254e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.06e-1

QD
type: SiteQuality
SIO_000300: 9.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.939e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.340000000000001e-1

GenotypeQuality
all individuals: 1169
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1796
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2936
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 614
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1848
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1290
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.607717041800643e-3
allele num: 622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2030
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14808
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 4.489e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.89e-1

QD
type: SiteQuality
SIO_000300: 6.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.535e0

DP
type: SiteQuality
SIO_000300: 6.69423e5

VQSLOD
type: SiteQuality
SIO_000300: 1.35e0

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-2

GenotypeQuality
all individuals: 1288
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12045
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2319
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1564
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 909
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3390
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22356
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.772421127259837e-4
allele num: 5642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2082
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3274
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3046
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.292e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.69e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.159e0

MQRankSum
type: SiteQuality
SIO_000300: -1.448e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

MQ
type: SiteQuality
SIO_000300: 3.979e1

DP
type: SiteQuality
SIO_000300: 1.147665e6

VQSLOD
type: SiteQuality
SIO_000300: 3.09e0

QD
type: SiteQuality
SIO_000300: 9.43e0

GenotypeQuality
all individuals: 1347
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2755
bin: 9.75e1
variant carriers: 30

GenotypeQuality
all individuals: 340
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 423
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 322
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 112
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 30
allele frequency: 2.742230347349177e-3
allele num: 10940
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 952
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 332
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3966
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.71e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.68e-1

MQ
type: SiteQuality
SIO_000300: 5.505e1

MQRankSum
type: SiteQuality
SIO_000300: 2.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.25e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-2

VQSLOD
type: SiteQuality
SIO_000300: -7.411e-1

DP
type: SiteQuality
SIO_000300: 4.39054e5

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.496e1

GenotypeQuality
all individuals: 119
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2760
bin: 9.75e1
variant carriers: 184

GenotypeQuality
all individuals: 569
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 372
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 271
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 5
allele frequency: 4.629629629629629e-3
allele num: 1080
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

African
type: Population
allele count: 179
allele frequency: 4.715489989462592e-2
allele num: 3796
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1100
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9072
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.509e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.48e0

VQSLOD
type: SiteQuality
SIO_000300: 2.63e0

QD
type: SiteQuality
SIO_000300: 1.587e1

DP
type: SiteQuality
SIO_000300: 2.224343e6

MQ
type: SiteQuality
SIO_000300: 5.899e1

GenotypeQuality
all individuals: 3578
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1361
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1160
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2619
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 384
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variant carriers: 0

GenotypeQuality
all individuals: 2154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 655
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variant carriers: 0

GenotypeQuality
all individuals: 3836
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3646
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62544
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.756567425569177e-5
allele num: 11420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.52e-2

DP
type: SiteQuality
SIO_000300: 2.198011e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.8e-1

MQ
type: SiteQuality
SIO_000300: 4.539e1

QD
type: SiteQuality
SIO_000300: 3.069e1

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

FS
type: SiteQuality
SIO_000300: 3.006e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.936e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.21e-1

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2709
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GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.432e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.211e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.81e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

DP
type: SiteQuality
SIO_000300: 8.827e3

GenotypeQuality
all individuals: 70
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

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East Asian
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Other
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European (Non-Finnish)
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MQRankSum
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ReadPosRankSum
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DP
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MQ
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BaseQRankSum
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FS
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InbreedingCoeff
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QD
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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Latino
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InbreedingCoeff
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FS
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DP
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VQSLOD
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Finnish)
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East Asian
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South Asian
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Latino
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European (Non-Finnish)
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ClippingRankSum
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MQ
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FS
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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QD
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Non-Finnish)
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South Asian
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European (Finnish)
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East Asian
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Latino
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QD
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BaseQRankSum
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ReadPosRankSum
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FS
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VQSLOD
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MQRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Other
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European (Finnish)
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Latino
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South Asian
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East Asian
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BaseQRankSum
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MQRankSum
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FS
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MQ
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InbreedingCoeff
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VQSLOD
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DP
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ClippingRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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African
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Other
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East Asian
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Latino
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European (Non-Finnish)
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MQ
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DP
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BaseQRankSum
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ReadPosRankSum
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QD
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VQSLOD
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MQRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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