16-87744985-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87744985
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87744985
    reference: chr 16
allele count: 2
allele frequency: 1.657907389293234e-5
allele num: 120634
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.900C>G
  hgvsp: ENST00000567298.1:c.900C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.630C>G
  hgvsp: ENST00000562261.1:c.630C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.900C>G
  hgvsp: ENST00000270583.5:c.900C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.442C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*521C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.294C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.807C>G
  hgvsp: ENST00000347925.5:c.807C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.729C>G
  hgvsp: ENST00000353170.5:c.729C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.765C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1883C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.450C>G
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17563
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31823
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser300Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ

16-87744986-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87744986
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87744986
    reference: chr 16
allele count: 1
allele frequency: 8.291048983517394e-6
allele num: 120612
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.449C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.728C>T
  hgvsp: ENSP00000262530.5:p.Ser243Phe
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.629C>T
  hgvsp: ENSP00000455780.1:p.Ser210Phe
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.441C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*520C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.899C>T
  hgvsp: ENSP00000457570.1:p.Ser300Phe
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.899C>T
  hgvsp: ENSP00000270583.4:p.Ser300Phe
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.806C>T
  hgvsp: ENSP00000325717.5:p.Ser269Phe
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.293C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.764C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1882C>T
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17547
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9329
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31828
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser300Phe
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
reference allele: G
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

16-87744989-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87744989
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87744989
    reference: chr 16
allele count: 1
allele frequency: 8.294900295298451e-6
allele num: 120556
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.896T>C
  hgvsp: ENSP00000457570.1:p.Phe299Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*517T>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.290T>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.896T>C
  hgvsp: ENSP00000270583.4:p.Phe299Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.803T>C
  hgvsp: ENSP00000325717.5:p.Phe268Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.438T>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.725T>C
  hgvsp: ENSP00000262530.5:p.Phe242Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.626T>C
  hgvsp: ENSP00000455780.1:p.Phe209Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.446T>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.761T>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1879T>C
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe299Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/16-87744996-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87744996
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87744996
    reference: chr 16
allele count: 3
allele frequency: 2.492812390939458e-5
allele num: 120346
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*510T>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.431T>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.889T>G
  hgvsp: ENSP00000270583.4:p.Ser297Ala
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.439T>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.718T>G
  hgvsp: ENSP00000262530.5:p.Ser240Ala
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.889T>G
  hgvsp: ENSP00000457570.1:p.Ser297Ala
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.796T>G
  hgvsp: ENSP00000325717.5:p.Ser266Ala
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.283T>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.619T>G
  hgvsp: ENSP00000455780.1:p.Ser207Ala
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.754T>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1872T>G
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser297Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

16-87744998-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87744998
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87744998
    reference: chr 16
allele count: 30
allele frequency: 2.494055833596595e-4
allele num: 120286
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.887G>A
  hgvsp: ENSP00000270583.4:p.Arg296Gln
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.617G>A
  hgvsp: ENSP00000455780.1:p.Arg206Gln
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.887G>A
  hgvsp: ENSP00000457570.1:p.Arg296Gln
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.716G>A
  hgvsp: ENSP00000262530.5:p.Arg239Gln
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.429G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*508G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1870G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.281G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.794G>A
  hgvsp: ENSP00000325717.5:p.Arg265Gln
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.437G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.752G>A
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31747
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9255
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 17344
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Arg296Gln
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

16-87744999-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87744999
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87744999
    reference: chr 16
allele count: 9
allele frequency: 7.484407484407484e-5
allele num: 120250
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*507C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.436C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.751C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.280C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.886C>T
  hgvsp: ENSP00000457570.1:p.Arg296Trp
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.715C>T
  hgvsp: ENSP00000262530.5:p.Arg239Trp
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1869C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.616C>T
  hgvsp: ENSP00000455780.1:p.Arg206Trp
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.793C>T
  hgvsp: ENSP00000325717.5:p.Arg265Trp
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.886C>T
  hgvsp: ENSP00000270583.4:p.Arg296Trp
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.428C>T
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17325
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg296Trp
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

16-87745008-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745008
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745008
    reference: chr 16
allele count: 1
allele frequency: 8.34278849362611e-6
allele num: 119864
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.706C>A
  hgvsp: ENSP00000262530.5:p.Pro236Thr
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.877C>A
  hgvsp: ENSP00000270583.4:p.Pro293Thr
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.742C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.271C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.607C>A
  hgvsp: ENSP00000455780.1:p.Pro203Thr
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.419C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*498C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.784C>A
  hgvsp: ENSP00000325717.5:p.Pro262Thr
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1860C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.427C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.877C>A
  hgvsp: ENSP00000457570.1:p.Pro293Thr
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9217
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro293Thr
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

http://identifiers.org/exac.variant/16-87745013-A-AC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745013
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745014
    reference: chr 16
allele count: 1
allele frequency: 8.36946150884652e-6
allele num: 119482
alternate allele: AC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.421dupG
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1854dupG
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.413dupG
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.871dupG
  hgvsp: ENSP00000457570.1:p.Val291GlyfsTer27
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.700dupG
  hgvsp: ENSP00000262530.5:p.Val234GlyfsTer27
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*492dupG
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.601dupG
  hgvsp: ENSP00000455780.1:p.Val201GlyfsTer27
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.736dupG
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.778dupG
  hgvsp: ENSP00000325717.5:p.Val260GlyfsTer27
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.265dupG
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.871dupG
  hgvsp: ENSP00000270583.4:p.Val291GlyfsTer27
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31509
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9163
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val291GlyfsTer27
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

16-87745018-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745018
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745018
    reference: chr 16
allele count: 3
allele frequency: 2.519314746388982e-5
allele num: 119080
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.774G>A
  hgvsp: ENST00000347925.5:c.774G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1850G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.867G>A
  hgvsp: ENST00000567298.1:c.867G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*488G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.696G>A
  hgvsp: ENST00000353170.5:c.696G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.867G>A
  hgvsp: ENST00000270583.5:c.867G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.597G>A
  hgvsp: ENST00000562261.1:c.597G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.732G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.417G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.409G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.261G>A
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9096
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31434
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser289Ser
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

16-87745019-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745019
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745019
    reference: chr 16
allele count: 14
allele frequency: 1.176648568691062e-4
allele num: 118982
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.866C>T
  hgvsp: ENSP00000457570.1:p.Ser289Leu
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.416C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.260C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1849C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.773C>T
  hgvsp: ENSP00000325717.5:p.Ser258Leu
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.866C>T
  hgvsp: ENSP00000270583.4:p.Ser289Leu
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.408C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.596C>T
  hgvsp: ENSP00000455780.1:p.Ser199Leu
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.695C>T
  hgvsp: ENSP00000262530.5:p.Ser232Leu
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.731C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*487C>T
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31433
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16657
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser289Leu
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS

16-87745019-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745019
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745019
    reference: chr 16
allele count: 1
allele frequency: 8.40463263350759e-6
allele num: 118982
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1849C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.260C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.596C>A
  hgvsp: ENSP00000455780.1:p.Ser199Ter
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.773C>A
  hgvsp: ENSP00000325717.5:p.Ser258Ter
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*487C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.695C>A
  hgvsp: ENSP00000262530.5:p.Ser232Ter
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.866C>A
  hgvsp: ENSP00000457570.1:p.Ser289Ter
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.408C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.731C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.866C>A
  hgvsp: ENSP00000270583.4:p.Ser289Ter
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.416C>A
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16657
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31433
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser289Ter
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP

16-87745021-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745021
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745021
    reference: chr 16
allele count: 15
allele frequency: 1.262902655463317e-4
allele num: 118774
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.864T>C
  hgvsp: ENST00000270583.5:c.864T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.729T>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.693T>C
  hgvsp: ENST00000353170.5:c.693T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.258T>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.771T>C
  hgvsp: ENST00000347925.5:c.771T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.594T>C
  hgvsp: ENST00000562261.1:c.594T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.406T>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*485T>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.864T>C
  hgvsp: ENST00000567298.1:c.864T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1847T>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.414T>C
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9031
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16529
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro288Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

16-87745025-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745025
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745025
    reference: chr 16
allele count: 1
allele frequency: 8.486803021301875e-6
allele num: 117830
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.590A>G
  hgvsp: ENSP00000455780.1:p.Asn197Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.689A>G
  hgvsp: ENSP00000262530.5:p.Asn230Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1843A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.725A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.860A>G
  hgvsp: ENSP00000457570.1:p.Asn287Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.860A>G
  hgvsp: ENSP00000270583.4:p.Asn287Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.402A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*481A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.767A>G
  hgvsp: ENSP00000325717.5:p.Asn256Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.410A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.254A>G
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8881
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16049
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn287Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

16-87745031-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745031
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745031
    reference: chr 16
allele count: 1
allele frequency: 8.577653497109331e-6
allele num: 116582
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.584G>C
  hgvsp: ENSP00000455780.1:p.Arg195Pro
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.854G>C
  hgvsp: ENSP00000270583.4:p.Arg285Pro
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.761G>C
  hgvsp: ENSP00000325717.5:p.Arg254Pro
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.404G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.396G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.719G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.683G>C
  hgvsp: ENSP00000262530.5:p.Arg228Pro
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.248G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.854G>C
  hgvsp: ENSP00000457570.1:p.Arg285Pro
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1837G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*475G>C
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30110
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15523
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg285Pro
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

16-87745031-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745031
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745031
    reference: chr 16
allele count: 3
allele frequency: 2.573296049132799e-5
allele num: 116582
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.683G>A
  hgvsp: ENSP00000262530.5:p.Arg228Gln
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.248G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.396G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*475G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.854G>A
  hgvsp: ENSP00000270583.4:p.Arg285Gln
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.584G>A
  hgvsp: ENSP00000455780.1:p.Arg195Gln
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.719G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1837G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.761G>A
  hgvsp: ENSP00000325717.5:p.Arg254Gln
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.854G>A
  hgvsp: ENSP00000457570.1:p.Arg285Gln
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.404G>A
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15523
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8605
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30110
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg285Gln
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD

16-87745032-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745032
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745032
    reference: chr 16
allele count: 2
allele frequency: 1.716325689962927e-5
allele num: 116528
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.682C>T
  hgvsp: ENSP00000262530.5:p.Arg228Trp
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.760C>T
  hgvsp: ENSP00000325717.5:p.Arg254Trp
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.853C>T
  hgvsp: ENSP00000457570.1:p.Arg285Trp
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1836C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.247C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.718C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.395C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*474C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.583C>T
  hgvsp: ENSP00000455780.1:p.Arg195Trp
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.403C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.853C>T
  hgvsp: ENSP00000270583.4:p.Arg285Trp
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15589
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30135
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg285Trp
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-87745041-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745041
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745041
    reference: chr 16
allele count: 1
allele frequency: 8.85112409275978e-6
allele num: 112980
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.751G>T
  hgvsp: ENSP00000325717.5:p.Val251Phe
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.386G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.709G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.574G>T
  hgvsp: ENSP00000455780.1:p.Val192Phe
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.673G>T
  hgvsp: ENSP00000262530.5:p.Val225Phe
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.844G>T
  hgvsp: ENSP00000270583.4:p.Val282Phe
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.238G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.394G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*465G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1827G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.844G>T
  hgvsp: ENSP00000457570.1:p.Val282Phe
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27919
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7755
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3792
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val282Phe
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-87745041-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745041
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745041
    reference: chr 16
allele count: 1
allele frequency: 8.85112409275978e-6
allele num: 112980
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.709G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.238G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.574G>C
  hgvsp: ENSP00000455780.1:p.Val192Leu
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*465G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.673G>C
  hgvsp: ENSP00000262530.5:p.Val225Leu
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.751G>C
  hgvsp: ENSP00000325717.5:p.Val251Leu
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.386G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.394G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.844G>C
  hgvsp: ENSP00000270583.4:p.Val282Leu
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1827G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.844G>C
  hgvsp: ENSP00000457570.1:p.Val282Leu
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27919
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7755
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3792
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val282Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

16-87745044-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745044
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745044
    reference: chr 16
allele count: 1
allele frequency: 8.994585259673677e-6
allele num: 111178
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1824T>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.841T>C
  hgvsp: ENSP00000270583.4:p.Trp281Arg
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.670T>C
  hgvsp: ENSP00000262530.5:p.Trp224Arg
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.235T>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.571T>C
  hgvsp: ENSP00000455780.1:p.Trp191Arg
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.841T>C
  hgvsp: ENSP00000457570.1:p.Trp281Arg
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.748T>C
  hgvsp: ENSP00000325717.5:p.Trp250Arg
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.391T>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.706T>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.383T>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*462T>C
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13196
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4602
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6758
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp281Arg
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

16-87745067-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745067
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745067
    reference: chr 16
allele count: 1
allele frequency: 1.023625271260697e-5
allele num: 97692
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.836-18C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.836-18C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.701-18C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.230-18C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.386-18C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.378-18C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.743-18C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*457-18C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.665-18C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.566-18C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1819-18C>G
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12464
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22486
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4062
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7067
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23744
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-87745071-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745071
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745071
    reference: chr 16
allele count: 1
allele frequency: 1.048415843660229e-5
allele num: 95382
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.836-22C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.386-22C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.378-22C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.665-22C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.743-22C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.566-22C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.230-22C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.701-22C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*457-22C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1819-22C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.836-22C>T
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6117
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10931
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5092
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9731
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24874
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-87745075-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745075
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745075
    reference: chr 16
allele count: 1
allele frequency: 1.077029122867482e-5
allele num: 92848
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*457-26C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.743-26C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.701-26C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.836-26C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.836-26C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.566-26C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.378-26C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.386-26C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.230-26C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.665-26C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1819-26C>T
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26717
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4952
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11571
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5897
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

16-87745077-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745077
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745077
    reference: chr 16
allele count: 1
allele frequency: 1.088257699423223e-5
allele num: 91890
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.701-28A>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.386-28A>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.743-28A>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.665-28A>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.836-28A>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.566-28A>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.230-28A>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.378-28A>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*457-28A>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.836-28A>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1819-28A>C
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11859
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6862
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6312
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD

16-87745080-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745080
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745080
    reference: chr 16
allele count: 4
allele frequency: 4.52028477794101e-5
allele num: 88490
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.701-31C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.836-31C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*457-31C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.386-31C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.378-31C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1819-31C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.665-31C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.566-31C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.836-31C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.743-31C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.230-31C>G
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27301
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3068
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8959
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4214
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12642
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 949
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

16-87745085-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745085
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745085
    reference: chr 16
allele count: 2
allele frequency: 2.363730912872879e-5
allele num: 84612
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.836-36G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.701-36G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.665-36G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.836-36G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1819-36G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.743-36G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.230-36G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.386-36G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.378-36G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.566-36G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*457-36G>A
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2727
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13898
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26266
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3542
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4264
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-87745097-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745097
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745097
    reference: chr 16
allele count: 3
allele frequency: 4.054601973239627e-5
allele num: 73990
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.566-48G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1819-48G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*457-48G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.665-48G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.836-48G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.743-48G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.230-48G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.836-48G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.386-48G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.701-48G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.378-48G>T
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3323
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18449
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10903
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4971
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum

16-87745098-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745098
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745098
    reference: chr 16
allele count: 4
allele frequency: 5.45866426485439e-5
allele num: 73278
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.378-49A>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.743-49A>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.665-49A>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.386-49A>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.836-49A>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.836-49A>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1819-49A>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.230-49A>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.701-49A>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*457-49A>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.566-49A>T
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10840
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3932
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18694
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22049
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD

16-87745098-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745098
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745098
    reference: chr 16
allele count: 2
allele frequency: 2.729332132427195e-5
allele num: 73278
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.836-49A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1819-49A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.230-49A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.743-49A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.566-49A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*457-49A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.386-49A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.378-49A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.701-49A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.836-49A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.665-49A>G
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3932
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18694
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22049
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10840
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6439
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

16-87745101-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745101
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745101
    reference: chr 16
allele count: 5
allele frequency: 6.92770249674398e-5
allele num: 72174
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.566-52C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.378-52C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.836-52C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.665-52C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.701-52C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.743-52C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1819-52C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*457-52C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.230-52C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.386-52C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.836-52C>T
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18926
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21891
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10735
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5503
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-87745101-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87745101
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87745101
    reference: chr 16
allele count: 1
allele frequency: 1.385540499348796e-5
allele num: 72174
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.230-52C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1819-52C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.665-52C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*457-52C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.701-52C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.743-52C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.836-52C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.386-52C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.378-52C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.836-52C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.566-52C>G
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10735
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18926
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21891
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1900
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP

16-87748054-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748054
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748054
    reference: chr 16
allele count: 57
allele frequency: 4.743833017077799e-4
allele num: 120156
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.229+50G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.742+50G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.377+50G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.385+50G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.664+50G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.565+50G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.835+50G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1818+50G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.835+50G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*456+50G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.700+50G>A
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3443
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 24458
  bin: 9.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3533
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

16-87748055-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748055
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748055
    reference: chr 16
allele count: 1
allele frequency: 8.319744417451495e-6
allele num: 120196
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.835+49C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1818+49C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.377+49C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.565+49C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*456+49C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.229+49C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.742+49C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.700+49C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.385+49C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.835+49C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.664+49C>A
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24449
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

16-87748063-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748063
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748063
    reference: chr 16
allele count: 1
allele frequency: 8.309650828472188e-6
allele num: 120342
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.742+41G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.565+41G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.377+41G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*456+41G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.835+41G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.229+41G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.835+41G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.700+41G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.385+41G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1818+41G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.664+41G>A
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24450
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

16-87748076-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748076
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748075
    reference: chr 16
allele count: 1
allele frequency: 8.290911502810618e-6
allele num: 120614
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.835+27delG
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.565+27delG
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*456+27delG
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.229+27delG
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.700+27delG
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.835+27delG
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.742+27delG
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.385+27delG
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.377+27delG
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.664+27delG
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1818+27delG
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24452
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: TC
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

16-87748079-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748079
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748079
    reference: chr 16
allele count: 3
allele frequency: 2.486490070616318e-5
allele num: 120652
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.835+25G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.742+25G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.229+25G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1818+25G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.565+25G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.385+25G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*456+25G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.700+25G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.377+25G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.664+25G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.835+25G>A
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24451
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

16-87748080-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748080
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748080
    reference: chr 16
allele count: 1
allele frequency: 8.283219853221344e-6
allele num: 120726
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.835+24C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.229+24C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.835+24C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.377+24C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.700+24C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1818+24C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.385+24C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*456+24C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.664+24C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.742+24C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.565+24C>T
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24451
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

16-87748085-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748085
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748085
    reference: chr 16
allele count: 2
allele frequency: 1.654697686732634e-5
allele num: 120868
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.700+19C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.229+19C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.835+19C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1818+19C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.385+19C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.565+19C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*456+19C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.377+19C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.835+19C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.742+19C>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.664+19C>A
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24451
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS

16-87748088-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748088
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748088
    reference: chr 16
allele count: 1
allele frequency: 8.268836409340477e-6
allele num: 120936
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.229+16C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1818+16C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.742+16C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.565+16C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*456+16C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.835+16C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.835+16C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.377+16C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.700+16C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.385+16C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.664+16C>T
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3319
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24451
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

16-87748097-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748097
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748097
    reference: chr 16
allele count: 1
allele frequency: 8.256002113536541e-6
allele num: 121124
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1818+7G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.742+7G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.565+7G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.700+7G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.229+7G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.377+7G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.385+7G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.664+7G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.835+7G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*456+7G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.835+7G>A
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24452
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.835+7G>A
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP

16-87748100-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748100
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748100
    reference: chr 16
allele count: 2
allele frequency: 1.650519088253256e-5
allele num: 121174
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.835+4G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1818+4G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.565+4G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.377+4G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.742+4G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.700+4G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.229+4G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*456+4G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.664+4G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.835+4G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.385+4G>C
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.835+4G>C
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

16-87748103-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748103
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748103
    reference: chr 16
allele count: 1
allele frequency: 8.251097395953662e-6
allele num: 121196
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.565+1G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.742+1G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1818+1G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.229+1G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.385+1G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.835+1G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.664+1G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.835+1G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*456+1G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.700+1G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.377+1G>A
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24453
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
hgvs: c.835+1G>A
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD

16-87748105-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748105
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748105
    reference: chr 16
allele count: 1
allele frequency: 8.249191579225235e-6
allele num: 121224
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.663A>G
  hgvsp: ENST00000353170.5:c.663A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.564A>G
  hgvsp: ENST00000562261.1:c.564A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.834A>G
  hgvsp: ENST00000270583.5:c.834A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.699A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.834A>G
  hgvsp: ENST00000567298.1:c.834A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.228A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*455A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.376A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1817A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.384A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.741A>G
  hgvsp: ENST00000347925.5:c.741A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.834A>G
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

16-87748107-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748107
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748107
    reference: chr 16
allele count: 1
allele frequency: 8.247014580721778e-6
allele num: 121256
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.697G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.382G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.374G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.832G>C
  hgvsp: ENSP00000457570.1:p.Glu278Gln
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.832G>C
  hgvsp: ENSP00000270583.4:p.Glu278Gln
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.739G>C
  hgvsp: ENSP00000325717.5:p.Glu247Gln
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.661G>C
  hgvsp: ENSP00000262530.5:p.Glu221Gln
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.226G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.562G>C
  hgvsp: ENSP00000455780.1:p.Glu188Gln
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*453G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1815G>C
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24454
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu278Gln
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-87748112-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748112
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748112
    reference: chr 16
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.221G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*448G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.827G>C
  hgvsp: ENSP00000457570.1:p.Gly276Ala
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.827G>C
  hgvsp: ENSP00000270583.4:p.Gly276Ala
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.692G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.734G>C
  hgvsp: ENSP00000325717.5:p.Gly245Ala
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.656G>C
  hgvsp: ENSP00000262530.5:p.Gly219Ala
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.369G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.377G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1810G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.557G>C
  hgvsp: ENSP00000455780.1:p.Gly186Ala
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24455
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly276Ala
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ

16-87748114-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748114
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748114
    reference: chr 16
allele count: 1
allele frequency: 8.243071698237632e-6
allele num: 121314
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.654C>T
  hgvsp: ENST00000353170.5:c.654C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.555C>T
  hgvsp: ENST00000562261.1:c.555C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*446C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.825C>T
  hgvsp: ENST00000567298.1:c.825C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.219C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.375C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.732C>T
  hgvsp: ENST00000347925.5:c.732C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.825C>T
  hgvsp: ENST00000270583.5:c.825C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.367C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1808C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.690C>T
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24454
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp275Asp
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

16-87748122-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748122
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748122
    reference: chr 16
allele count: 1
allele frequency: 8.241712957621112e-6
allele num: 121334
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.646C>T
  hgvsp: ENSP00000262530.5:p.Pro216Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.817C>T
  hgvsp: ENSP00000270583.4:p.Pro273Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*438C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.367C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.547C>T
  hgvsp: ENSP00000455780.1:p.Pro183Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.817C>T
  hgvsp: ENSP00000457570.1:p.Pro273Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.724C>T
  hgvsp: ENSP00000325717.5:p.Pro242Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1800C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.211C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.359C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.682C>T
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24454
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro273Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

16-87748126-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748126
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748126
    reference: chr 16
allele count: 1
allele frequency: 8.240897928238261e-6
allele num: 121346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.813G>A
  hgvsp: ENST00000567298.1:c.813G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1796G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.642G>A
  hgvsp: ENST00000353170.5:c.642G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.543G>A
  hgvsp: ENST00000562261.1:c.543G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.678G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*434G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.813G>A
  hgvsp: ENST00000270583.5:c.813G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.720G>A
  hgvsp: ENST00000347925.5:c.720G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.355G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.363G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.207G>A
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24454
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu271Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum

16-87748128-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748128
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748128
    reference: chr 16
allele count: 2
allele frequency: 1.648125257519571e-5
allele num: 121350
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1794C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.361C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.541C>T
  hgvsp: ENST00000562261.1:c.541C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.811C>T
  hgvsp: ENST00000270583.5:c.811C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.353C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.811C>T
  hgvsp: ENST00000567298.1:c.811C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*432C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.640C>T
  hgvsp: ENST00000353170.5:c.640C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.676C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.205C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.718C>T
  hgvsp: ENST00000347925.5:c.718C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24454
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu271Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-87748128-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748128
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748128
    reference: chr 16
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.811C>G
  hgvsp: ENSP00000457570.1:p.Leu271Val
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.811C>G
  hgvsp: ENSP00000270583.4:p.Leu271Val
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.205C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.541C>G
  hgvsp: ENSP00000455780.1:p.Leu181Val
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1794C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.640C>G
  hgvsp: ENSP00000262530.5:p.Leu214Val
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.361C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.718C>G
  hgvsp: ENSP00000325717.5:p.Leu240Val
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*432C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.353C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.676C>G
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24454
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu271Val
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/16-87748129-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748129
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748129
    reference: chr 16
allele count: 1
allele frequency: 8.240490473993011e-6
allele num: 121352
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.540G>T
  hgvsp: ENST00000562261.1:c.540G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1793G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.810G>T
  hgvsp: ENST00000567298.1:c.810G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.352G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.360G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.810G>T
  hgvsp: ENST00000270583.5:c.810G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.639G>T
  hgvsp: ENST00000353170.5:c.639G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.204G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.717G>T
  hgvsp: ENST00000347925.5:c.717G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*431G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.675G>T
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24453
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu270Leu
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

16-87748133-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748133
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748133
    reference: chr 16
allele count: 2
allele frequency: 1.647989452867502e-5
allele num: 121360
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.806T>C
  hgvsp: ENSP00000457570.1:p.Phe269Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.635T>C
  hgvsp: ENSP00000262530.5:p.Phe212Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*427T>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.536T>C
  hgvsp: ENSP00000455780.1:p.Phe179Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.200T>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.713T>C
  hgvsp: ENSP00000325717.5:p.Phe238Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.806T>C
  hgvsp: ENSP00000270583.4:p.Phe269Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.356T>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.348T>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1789T>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.671T>C
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24453
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe269Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/16-87748135-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748135
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748135
    reference: chr 16
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.711G>T
  hgvsp: ENSP00000325717.5:p.Met237Ile
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1787G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.346G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*425G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.633G>T
  hgvsp: ENSP00000262530.5:p.Met211Ile
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.804G>T
  hgvsp: ENSP00000270583.4:p.Met268Ile
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.669G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.198G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.804G>T
  hgvsp: ENSP00000457570.1:p.Met268Ile
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.354G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.534G>T
  hgvsp: ENSP00000455780.1:p.Met178Ile
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24452
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2436
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met268Ile
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum

16-87748138-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748138
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748138
    reference: chr 16
allele count: 16
allele frequency: 1.318326384654681e-4
allele num: 121366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1784C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.801C>G
  hgvsp: ENSP00000270583.4:p.Asp267Glu
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.708C>G
  hgvsp: ENSP00000325717.5:p.Asp236Glu
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.801C>G
  hgvsp: ENSP00000457570.1:p.Asp267Glu
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.630C>G
  hgvsp: ENSP00000262530.5:p.Asp210Glu
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.195C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.531C>G
  hgvsp: ENSP00000455780.1:p.Asp177Glu
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*422C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.666C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.351C>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.343C>G
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24453
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
hgvs: p.Asp267Glu
num of homozygotes: 1
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

16-87748140-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748140
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748140
    reference: chr 16
allele count: 2
allele frequency: 1.647880825258717e-5
allele num: 121368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.193G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.529G>C
  hgvsp: ENSP00000455780.1:p.Asp177His
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.706G>C
  hgvsp: ENSP00000325717.5:p.Asp236His
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.628G>C
  hgvsp: ENSP00000262530.5:p.Asp210His
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.341G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.799G>C
  hgvsp: ENSP00000270583.4:p.Asp267His
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1782G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.799G>C
  hgvsp: ENSP00000457570.1:p.Asp267His
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.664G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*420G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.349G>C
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24449
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2910
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp267His
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-87748142-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748142
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748142
    reference: chr 16
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.797C>T
  hgvsp: ENSP00000270583.4:p.Ser266Leu
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.662C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.626C>T
  hgvsp: ENSP00000262530.5:p.Ser209Leu
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.339C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*418C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.797C>T
  hgvsp: ENSP00000457570.1:p.Ser266Leu
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.527C>T
  hgvsp: ENSP00000455780.1:p.Ser176Leu
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.704C>T
  hgvsp: ENSP00000325717.5:p.Ser235Leu
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.191C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1780C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.347C>T
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3440
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24448
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser266Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

16-87748147-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748147
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748147
    reference: chr 16
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.657G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.792G>A
  hgvsp: ENST00000270583.5:c.792G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.186G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.699G>A
  hgvsp: ENST00000347925.5:c.699G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.522G>A
  hgvsp: ENST00000562261.1:c.522G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.334G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.621G>A
  hgvsp: ENST00000353170.5:c.621G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.792G>A
  hgvsp: ENST00000567298.1:c.792G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.342G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1775G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*413G>A
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24448
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3428
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3440
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg264Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP

16-87748148-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748148
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748148
    reference: chr 16
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.791G>C
  hgvsp: ENSP00000270583.4:p.Arg264Pro
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*412G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.341G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.656G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.620G>C
  hgvsp: ENSP00000262530.5:p.Arg207Pro
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.698G>C
  hgvsp: ENSP00000325717.5:p.Arg233Pro
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.791G>C
  hgvsp: ENSP00000457570.1:p.Arg264Pro
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.185G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.521G>C
  hgvsp: ENSP00000455780.1:p.Arg174Pro
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1774G>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.333G>C
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3440
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24448
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg264Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD

16-87748148-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748148
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748148
    reference: chr 16
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1774G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.341G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.185G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.791G>A
  hgvsp: ENSP00000270583.4:p.Arg264Gln
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*412G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.656G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.791G>A
  hgvsp: ENSP00000457570.1:p.Arg264Gln
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.521G>A
  hgvsp: ENSP00000455780.1:p.Arg174Gln
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.620G>A
  hgvsp: ENSP00000262530.5:p.Arg207Gln
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.698G>A
  hgvsp: ENSP00000325717.5:p.Arg233Gln
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.333G>A
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3440
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24448
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg264Gln
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

16-87748149-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748149
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748149
    reference: chr 16
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*411C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1773C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.790C>T
  hgvsp: ENSP00000270583.4:p.Arg264Trp
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.790C>T
  hgvsp: ENSP00000457570.1:p.Arg264Trp
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.697C>T
  hgvsp: ENSP00000325717.5:p.Arg233Trp
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.655C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.619C>T
  hgvsp: ENSP00000262530.5:p.Arg207Trp
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.520C>T
  hgvsp: ENSP00000455780.1:p.Arg174Trp
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.184C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.332C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.340C>T
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3440
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24446
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg264Trp
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

16-87748150-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748150
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748150
    reference: chr 16
allele count: 13
allele frequency: 1.071140187531928e-4
allele num: 121366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.331A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.789A>G
  hgvsp: ENST00000270583.5:c.789A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.696A>G
  hgvsp: ENST00000347925.5:c.696A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.789A>G
  hgvsp: ENST00000567298.1:c.789A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.183A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.519A>G
  hgvsp: ENST00000562261.1:c.519A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.618A>G
  hgvsp: ENST00000353170.5:c.618A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*410A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.339A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1772A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.654A>G
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24448
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3440
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2659
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr263Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

16-87748151-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748151
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748151
    reference: chr 16
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.330C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.788C>T
  hgvsp: ENSP00000270583.4:p.Thr263Ile
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1771C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*409C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.788C>T
  hgvsp: ENSP00000457570.1:p.Thr263Ile
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.617C>T
  hgvsp: ENSP00000262530.5:p.Thr206Ile
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.695C>T
  hgvsp: ENSP00000325717.5:p.Thr232Ile
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.653C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.518C>T
  hgvsp: ENSP00000455780.1:p.Thr173Ile
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.182C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.338C>T
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3439
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24447
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Thr263Ile
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

16-87748152-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748152
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748152
    reference: chr 16
allele count: 27
allele frequency: 2.224639114099268e-4
allele num: 121368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1770A>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.787A>T
  hgvsp: ENSP00000270583.4:p.Thr263Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.517A>T
  hgvsp: ENSP00000455780.1:p.Thr173Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.337A>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*408A>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.787A>T
  hgvsp: ENSP00000457570.1:p.Thr263Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.652A>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.329A>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.694A>T
  hgvsp: ENSP00000325717.5:p.Thr232Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.616A>T
  hgvsp: ENSP00000262530.5:p.Thr206Ser
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.181A>T
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24454
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3440
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Thr263Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ

16-87748152-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748152
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748152
    reference: chr 16
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.652A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1770A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.517A>G
  hgvsp: ENSP00000455780.1:p.Thr173Ala
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*408A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.787A>G
  hgvsp: ENSP00000457570.1:p.Thr263Ala
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.329A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.181A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.694A>G
  hgvsp: ENSP00000325717.5:p.Thr232Ala
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.616A>G
  hgvsp: ENSP00000262530.5:p.Thr206Ala
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.787A>G
  hgvsp: ENSP00000270583.4:p.Thr263Ala
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.337A>G
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3440
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24454
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr263Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD

16-87748152-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748152
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748152
    reference: chr 16
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.652A>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.787A>C
  hgvsp: ENSP00000457570.1:p.Thr263Pro
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.616A>C
  hgvsp: ENSP00000262530.5:p.Thr206Pro
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*408A>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.694A>C
  hgvsp: ENSP00000325717.5:p.Thr232Pro
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.787A>C
  hgvsp: ENSP00000270583.4:p.Thr263Pro
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.337A>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.517A>C
  hgvsp: ENSP00000455780.1:p.Thr173Pro
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1770A>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.181A>C
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.329A>C
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24454
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3440
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr263Pro
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

16-87748157-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748157
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748157
    reference: chr 16
allele count: 3
allele frequency: 2.471861971227527e-5
allele num: 121366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*403A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.782A>G
  hgvsp: ENSP00000457570.1:p.Lys261Arg
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.689A>G
  hgvsp: ENSP00000325717.5:p.Lys230Arg
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.176A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.332A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.324A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.782A>G
  hgvsp: ENSP00000270583.4:p.Lys261Arg
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1765A>G
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.512A>G
  hgvsp: ENSP00000455780.1:p.Lys171Arg
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.611A>G
  hgvsp: ENSP00000262530.5:p.Lys204Arg
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.647A>G
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2659
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24449
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3438
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys261Arg
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-87748162-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748162
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748162
    reference: chr 16
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.642G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.319G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.606G>T
  hgvsp: ENST00000353170.5:c.606G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.507G>T
  hgvsp: ENST00000562261.1:c.507G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.777G>T
  hgvsp: ENST00000270583.5:c.777G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.777G>T
  hgvsp: ENST00000567298.1:c.777G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1760G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.684G>T
  hgvsp: ENST00000347925.5:c.684G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*398G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.171G>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.327G>T
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3370
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2660
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24447
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val259Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ

16-87748164-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748164
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748164
    reference: chr 16
allele count: 2
allele frequency: 1.647935137272997e-5
allele num: 121364
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*396G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1758G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.640G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.505G>A
  hgvsp: ENSP00000455780.1:p.Val169Met
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.604G>A
  hgvsp: ENSP00000262530.5:p.Val202Met
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.775G>A
  hgvsp: ENSP00000457570.1:p.Val259Met
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.682G>A
  hgvsp: ENSP00000325717.5:p.Val228Met
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.775G>A
  hgvsp: ENSP00000270583.4:p.Val259Met
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.325G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.169G>A
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.317G>A
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24446
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3438
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2659
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val259Met
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

16-87748165-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 87748165
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 87748165
    reference: chr 16
allele count: 2
allele frequency: 1.647962294622699e-5
allele num: 121362
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000567513
  gene symbol: KLHDC4
  hgvsc: ENST00000567513.1:n.316C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000457570
  ensembl transcript: ENST00000567298
  gene symbol: KLHDC4
  hgvsc: ENST00000567298.1:c.774C>T
  hgvsp: ENST00000567298.1:c.774C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000562913
  gene symbol: KLHDC4
  hgvsc: ENST00000562913.1:n.168C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000270583
  ensembl transcript: ENST00000270583
  gene symbol: KLHDC4
  hgvsc: ENST00000270583.5:c.774C>T
  hgvsp: ENST00000270583.5:c.774C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000325717
  ensembl transcript: ENST00000347925
  gene symbol: KLHDC4
  hgvsc: ENST00000347925.5:c.681C>T
  hgvsp: ENST00000347925.5:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455824
  ensembl transcript: ENST00000562155
  gene symbol: KLHDC4
  hgvsc: ENST00000562155.1:c.*395C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000316853
  gene symbol: KLHDC4
  hgvsc: ENST00000316853.6:n.639C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000455780
  ensembl transcript: ENST00000562261
  gene symbol: KLHDC4
  hgvsc: ENST00000562261.1:c.504C>T
  hgvsp: ENST00000562261.1:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104731
  ensembl protein: ENSP00000262530
  ensembl transcript: ENST00000353170
  gene symbol: KLHDC4
  hgvsc: ENST00000353170.5:c.603C>T
  hgvsp: ENST00000353170.5:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566661
  gene symbol: KLHDC4
  hgvsc: ENST00000566661.1:n.1757C>T
  variant of: http://identifiers.org/hgnc/25272
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104731
  ensembl transcript: ENST00000566349
  gene symbol: KLHDC4
  hgvsc: ENST00000566349.1:n.324C>T
  variant of: http://identifiers.org/hgnc/25272
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3368
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24447
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3438
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2659
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp258Asp
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1266
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1050
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 49328
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7211
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212856276531231e-4
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

MQRankSum
type: SiteQuality
SIO_000300: -2.76e-1

DP
type: SiteQuality
SIO_000300: 1.59584e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.94e-1

QD
type: SiteQuality
SIO_000300: 1.271e1

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

FS
type: SiteQuality
SIO_000300: 1.95e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.72e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

GenotypeQuality
all individuals: 84
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7215
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1267
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1053
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49333
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509160604871571e-5
allele num: 66262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.595224e6

FS
type: SiteQuality
SIO_000300: 8.159999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.489e0

VQSLOD
type: SiteQuality
SIO_000300: 2.04e-1

QD
type: SiteQuality
SIO_000300: 3.279e1

GenotypeQuality
all individuals: 1267
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7203
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509980974239725e-5
allele num: 66226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.23e-1

DP
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InbreedingCoeff
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SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.46e-1

FS
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MQ
type: SiteQuality
SIO_000300: 5.927e1

MQRankSum
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SIO_000300: -1.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

VQSLOD
type: SiteQuality
SIO_000300: -5.135e-1

QD
type: SiteQuality
SIO_000300: 1.097e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

Latino
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allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.540501271340356e-5
allele num: 66072
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.934e1

InbreedingCoeff
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ClippingRankSum
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SIO_000300: 5.25e-1

BaseQRankSum
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ReadPosRankSum
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SIO_000300: -5.84e-1

DP
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SIO_000300: 1.591185e6

QD
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SIO_000300: 1.4e1

FS
type: SiteQuality
SIO_000300: 2.625e0

MQRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.25e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66048
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
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allele count: 30
allele frequency: 2.927400468384075e-3
allele num: 10248
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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MQRankSum
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MQ
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InbreedingCoeff
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ReadPosRankSum
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FS
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SIO_000300: 1.351e0

BaseQRankSum
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SIO_000300: 2.72e0

ClippingRankSum
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SIO_000300: -2.89e-1

DP
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QD
type: SiteQuality
SIO_000300: 1.267e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 4
allele frequency: 3.904724716907458e-4
allele num: 10244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 7.571398285835429e-5
allele num: 66038
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.791e0

DP
type: SiteQuality
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VQSLOD
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QD
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MQRankSum
type: SiteQuality
SIO_000300: -6.0e-3

ReadPosRankSum
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SIO_000300: 2.89e-1

InbreedingCoeff
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SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-2

MQ
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SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -1.279e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.519341213649761e-5
allele num: 65818
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
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South Asian
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allele count: 0
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BaseQRankSum
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SIO_000300: -2.1e-2

ClippingRankSum
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DP
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VQSLOD
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FS
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InbreedingCoeff
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MQ
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ReadPosRankSum
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QD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10144
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.523786304208698e-5
allele num: 65626
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6552
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Latino
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allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

South Asian
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allele count: 0
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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BaseQRankSum
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QD
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DP
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FS
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
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allele num: 11432
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.893153937475267e-5
allele num: 10108
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

East Asian
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allele frequency: 1.177578897786152e-4
allele num: 8492
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South Asian
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allele count: 1
allele frequency: 6.176652254478072e-5
allele num: 16190
num of homozygotes: 0

European (Non-Finnish)
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Other
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InbreedingCoeff
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FS
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DP
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ClippingRankSum
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MQRankSum
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VQSLOD
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QD
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BaseQRankSum
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 3
allele frequency: 2.625590757920532e-4
allele num: 11426
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.912767644726408e-5
allele num: 10088
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16168
num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

East Asian
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allele frequency: 1.177856301531213e-4
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European (Non-Finnish)
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allele frequency: 1.376020548573525e-4
allele num: 65406
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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QD
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MQ
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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DP
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 65406
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QD
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MQ
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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MQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65326
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 9.315612967333251e-4
allele num: 16102
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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num of homozygotes: 0

Other
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num of homozygotes: 0

MQ
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SIO_000300: 6.0e1

MQRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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DP
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9926
num of homozygotes: 0

South Asian
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allele frequency: 6.309944472488642e-5
allele num: 15848
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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QD
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FS
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MQ
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MQRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
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allele num: 64308
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European (Finnish)
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Latino
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InbreedingCoeff
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FS
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BaseQRankSum
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VQSLOD
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DP
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MQ
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 9790
num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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allele frequency: 6.45244547683572e-5
allele num: 15498
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European (Non-Finnish)
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allele num: 64308
num of homozygotes: 0

Other
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East Asian
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European (Finnish)
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FS
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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BaseQRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

Other
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South Asian
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Latino
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East Asian
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European (Non-Finnish)
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European (Finnish)
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FS
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QD
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VQSLOD
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BaseQRankSum
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DP
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ClippingRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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European (Finnish)
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Latino
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European (Non-Finnish)
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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DP
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VQSLOD
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FS
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MQ
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QD
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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South Asian
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Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.598312182335454e-5
allele num: 62566
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FS
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MQ
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ReadPosRankSum
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VQSLOD
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MQRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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MQ
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DP
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QD
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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European (Finnish)
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East Asian
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Latino
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South Asian
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Other
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QD
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VQSLOD
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MQRankSum
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ReadPosRankSum
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DP
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BaseQRankSum
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FS
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MQ
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

East Asian
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European (Non-Finnish)
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Other
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num of homozygotes: 0

European (Finnish)
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MQ
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BaseQRankSum
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MQRankSum
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FS
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VQSLOD
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QD
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ClippingRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

Latino
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allele frequency: 1.095530236634531e-4
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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European (Finnish)
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Other
type: Population
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QD
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ReadPosRankSum
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InbreedingCoeff
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FS
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DP
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VQSLOD
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MQRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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European (Non-Finnish)
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num of homozygotes: 0

African
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Other
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East Asian
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European (Finnish)
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DP
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
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FS
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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South Asian
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European (Non-Finnish)
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European (Finnish)
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Latino
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Other
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ClippingRankSum
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FS
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BaseQRankSum
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MQRankSum
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QD
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MQ
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 48202
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European (Finnish)
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6936
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.18962645729241e-4
allele num: 8406
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: -2.637e0

MQ
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MQRankSum
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SIO_000300: 2.18e0

DP
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SIO_000300: 7.64468e5

InbreedingCoeff
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SIO_000300: -1.17e-2

FS
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SIO_000300: 6.698e0

VQSLOD
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SIO_000300: -1.212e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.61e-1

QD
type: SiteQuality
SIO_000300: 9.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele count: 3
allele frequency: 5.053908355795149e-4
allele num: 5936
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 7272
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4532
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7950
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 42652
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
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ReadPosRankSum
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DP
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InbreedingCoeff
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SIO_000300: -1.5e-2

ClippingRankSum
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MQ
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SIO_000300: 6.0e1

MQRankSum
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FS
type: SiteQuality
SIO_000300: 4.288e0

QD
type: SiteQuality
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BaseQRankSum
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SIO_000300: -1.881e0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 3
allele frequency: 5.898545025560362e-4
allele num: 5086
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5890
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.274859765425803e-4
allele num: 7844
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 42312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4482
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 536
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InbreedingCoeff
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SIO_000300: 1.41e-2

VQSLOD
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MQRankSum
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SIO_000300: -2.96e-1

DP
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SIO_000300: 7.08733e5

ClippingRankSum
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SIO_000300: 7.66e-1

ReadPosRankSum
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SIO_000300: -3.82e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

QD
type: SiteQuality
SIO_000300: 8.74e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 17
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5890
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.805836139169473e-4
allele num: 7128
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5086
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4482
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7844
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.41e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

ClippingRankSum
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SIO_000300: 7.66e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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SIO_000300: -2.703e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

DP
type: SiteQuality
SIO_000300: 7.08733e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.82e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4970
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.851851851851852e-3
allele num: 540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5762
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6986
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 9.582215408202377e-5
allele num: 41744
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4440
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e0

MQ
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SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
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MQRankSum
type: SiteQuality
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QD
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DP
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SIO_000300: 7.06977e5

VQSLOD
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SIO_000300: 1.19e-1

InbreedingCoeff
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SIO_000300: 1.39e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6986
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4970
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 5762
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 41744
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.293326435592343e-4
allele num: 7732
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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FS
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MQRankSum
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VQSLOD
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MQ
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QD
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ReadPosRankSum
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SIO_000300: 1.03e-1

DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66336
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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South Asian
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allele frequency: 3.625031798524548e-3
allele num: 15724
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African
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East Asian
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DP
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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FS
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.506886471173262e-5
allele num: 66362
num of homozygotes: 0

South Asian
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.433e0

BaseQRankSum
type: SiteQuality
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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QD
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ReadPosRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1934
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variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506024096385542e-5
allele num: 66400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15850
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

QD
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SIO_000300: 8.75e0

MQRankSum
type: SiteQuality
SIO_000300: 1.67e0

VQSLOD
type: SiteQuality
SIO_000300: -1.805e0

MQ
type: SiteQuality
SIO_000300: 5.917e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.579e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

FS
type: SiteQuality
SIO_000300: 8.917999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.252e0

DP
type: SiteQuality
SIO_000300: 5.13845e6

GenotypeQuality
all individuals: 250
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 287
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variant carriers: 0

GenotypeQuality
all individuals: 14
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3151
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16034
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504664459825459e-5
allele num: 66460
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

MQ
type: SiteQuality
SIO_000300: 5.998e1

FS
type: SiteQuality
SIO_000300: 8.596e0

QD
type: SiteQuality
SIO_000300: 1.407e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.36e-1

DP
type: SiteQuality
SIO_000300: 5.15183e6

GenotypeQuality
all individuals: 240
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504438092372499e-5
allele num: 66470
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.2453300124533e-4
allele num: 16060
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e-1

DP
type: SiteQuality
SIO_000300: 5.155237e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

FS
type: SiteQuality
SIO_000300: 3.806e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.396e1

MQRankSum
type: SiteQuality
SIO_000300: 5.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 716
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GenotypeQuality
all individuals: 214
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66494
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.208866261020738e-5
allele num: 16106
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.094e0

DP
type: SiteQuality
SIO_000300: 5.156551e6

FS
type: SiteQuality
SIO_000300: 1.4874e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.909e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.032e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.51e-1

QD
type: SiteQuality
SIO_000300: 9.65e0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3718
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variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 331
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GenotypeQuality
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GenotypeQuality
all individuals: 52027
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 694
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 743
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16198
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502945773716484e-5
allele num: 66536
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.49e-1

QD
type: SiteQuality
SIO_000300: 1.024e1

DP
type: SiteQuality
SIO_000300: 5.16239e6

VQSLOD
type: SiteQuality
SIO_000300: 6.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQRankSum
type: SiteQuality
SIO_000300: 1.36e0

FS
type: SiteQuality
SIO_000300: 9.96e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16250
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.54e-1

FS
type: SiteQuality
SIO_000300: 6.32e-1

BaseQRankSum
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SIO_000300: -5.969e0

DP
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SIO_000300: 5.164599e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.28e-1

MQ
type: SiteQuality
SIO_000300: 5.989e1

QD
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SIO_000300: 1.197e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.57e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 162
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.106497313141182e-5
allele num: 16376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.359999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
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SIO_000300: 1.23e0

BaseQRankSum
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MQRankSum
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SIO_000300: 3.1e-2

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.46e-1

DP
type: SiteQuality
SIO_000300: 5.169891e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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VQSLOD
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InbreedingCoeff
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FS
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ClippingRankSum
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DP
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ReadPosRankSum
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MQRankSum
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MQ
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BaseQRankSum
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SIO_000300: -2.15e-1

QD
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SIO_000300: 1.287e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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European (Finnish)
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ClippingRankSum
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MQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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MQ
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VQSLOD
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BaseQRankSum
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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African
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South Asian
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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DP
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QD
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FS
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MQRankSum
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VQSLOD
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BaseQRankSum
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MQ
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SIO_000300: 5.917e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.500600240096038e-5
allele num: 66640
num of homozygotes: 0

DP
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MQRankSum
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VQSLOD
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FS
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BaseQRankSum
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MQ
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QD
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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Latino
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European (Non-Finnish)
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allele num: 66660
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Other
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East Asian
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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QD
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VQSLOD
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ClippingRankSum
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FS
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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African
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South Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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DP
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ReadPosRankSum
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QD
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MQ
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MQRankSum
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FS
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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East Asian
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Latino
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European (Non-Finnish)
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African
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Other
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InbreedingCoeff
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FS
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MQRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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DP
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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Other
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African
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East Asian
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European (Finnish)
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South Asian
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ClippingRankSum
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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MQ
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FS
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.21197430614471e-4
allele num: 16502
num of homozygotes: 0

BaseQRankSum
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SIO_000300: -2.276e0

DP
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FS
type: SiteQuality
SIO_000300: 1.726e0

InbreedingCoeff
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SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

QD
type: SiteQuality
SIO_000300: 1.217e1

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.3e-2

ReadPosRankSum
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SIO_000300: 1.39e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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BaseQRankSum
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QD
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ClippingRankSum
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MQ
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SIO_000300: 5.976e1

DP
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SIO_000300: 5.173775e6

ReadPosRankSum
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SIO_000300: 1.39e0

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

FS
type: SiteQuality
SIO_000300: 1.726e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele num: 11578
num of homozygotes: 0

VQSLOD
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MQ
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MQRankSum
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BaseQRankSum
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FS
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SIO_000300: 3.35e0

InbreedingCoeff
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SIO_000300: 0.0e0

DP
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SIO_000300: 5.173663e6

ReadPosRankSum
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SIO_000300: -4.6e-2

QD
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.998410842253606e-5
allele num: 66702
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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SIO_000300: 1.28e0

MQ
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SIO_000300: 5.99e1

FS
type: SiteQuality
SIO_000300: 1.746e0

InbreedingCoeff
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SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 2.1e0

VQSLOD
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SIO_000300: 4.0e-4

ReadPosRankSum
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SIO_000300: -9.379999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.184e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.8e-2

DP
type: SiteQuality
SIO_000300: 5.173794e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.47e-1

VQSLOD
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MQRankSum
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DP
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InbreedingCoeff
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MQ
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SIO_000300: 5.893e1

BaseQRankSum
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QD
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FS
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ReadPosRankSum
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SIO_000300: 7.12e-1

GenotypeQuality
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variant carriers: 15

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 16
allele frequency: 2.398584834947381e-4
allele num: 66706
num of homozygotes: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele num: 11578
num of homozygotes: 0

FS
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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MQ
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VQSLOD
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MQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

Other
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South Asian
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Latino
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allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

InbreedingCoeff
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VQSLOD
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MQ
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QD
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DP
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BaseQRankSum
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MQRankSum
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FS
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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African
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East Asian
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European (Finnish)
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Latino
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Other
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InbreedingCoeff
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MQ
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MQRankSum
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DP
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BaseQRankSum
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FS
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QD
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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South Asian
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East Asian
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African
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Other
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ReadPosRankSum
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FS
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VQSLOD
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele num: 66710
num of homozygotes: 0

European (Finnish)
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Latino
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South Asian
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Other
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African
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East Asian
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MQ
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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DP
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BaseQRankSum
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ClippingRankSum
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FS
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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African
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Latino
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European (Non-Finnish)
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European (Finnish)
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South Asian
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BaseQRankSum
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MQRankSum
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VQSLOD
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ClippingRankSum
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QD
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FS
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InbreedingCoeff
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MQ
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

African
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Other
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European (Non-Finnish)
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East Asian
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South Asian
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Latino
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MQ
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VQSLOD
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DP
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MQRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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African
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South Asian
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East Asian
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European (Non-Finnish)
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Other
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ReadPosRankSum
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InbreedingCoeff
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FS
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MQ
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ClippingRankSum
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MQRankSum
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DP
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BaseQRankSum
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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Latino
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European (Finnish)
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Other
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South Asian
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VQSLOD
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FS
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InbreedingCoeff
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MQ
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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European (Non-Finnish)
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Other
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East Asian
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Latino
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South Asian
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FS
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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QD
type: SiteQuality
SIO_000300: 1.249e1

VQSLOD
type: SiteQuality
SIO_000300: 2.62e0

DP
type: SiteQuality
SIO_000300: 5.17525e6

MQ
type: SiteQuality
SIO_000300: 5.962e1

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4238
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1150
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52040
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 391
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.06e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.62e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

FS
type: SiteQuality
SIO_000300: 1.158e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.84e-1

DP
type: SiteQuality
SIO_000300: 5.17525e6

QD
type: SiteQuality
SIO_000300: 1.249e1

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4238
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52040
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 571
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1150
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.62e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
type: SiteQuality
SIO_000300: 1.158e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.249e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.84e-1

DP
type: SiteQuality
SIO_000300: 5.17525e6

GenotypeQuality
all individuals: 45
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52040
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4231
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1145
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817741153659719e-4
allele num: 16504
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 8.9e-2

MQRankSum
type: SiteQuality
SIO_000300: -9.25e-1

MQ
type: SiteQuality
SIO_000300: 5.989e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.363e0

FS
type: SiteQuality
SIO_000300: 5.639999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.49e0

QD
type: SiteQuality
SIO_000300: 1.458e1

DP
type: SiteQuality
SIO_000300: 5.173212e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52040
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1137
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4219
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.172765e6

MQRankSum
type: SiteQuality
SIO_000300: 9.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.57e0

VQSLOD
type: SiteQuality
SIO_000300: -2.425e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.24e-1

QD
type: SiteQuality
SIO_000300: 9.92e0

FS
type: SiteQuality
SIO_000300: 1.7587e1

MQ
type: SiteQuality
SIO_000300: 5.882e1

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4221
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1138
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52040
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.338e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -5.08e-1

QD
type: SiteQuality
SIO_000300: 1.317e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.84e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

DP
type: SiteQuality
SIO_000300: 5.172712e6

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0