17-3474810-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474810
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474810
    reference: chr 17
allele count: 35
allele frequency: 1.09109046698672e-3
allele num: 32078
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2347+8G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2434+8G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2347+8G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2317+8G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2347+8G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2167+8G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2341+8G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2380+8G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2347+8G>A
  variant of: http://identifiers.org/hgnc/1492
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35140
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5822
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8847
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 4.25e1
  variant carriers: 0
hgvs: c.2347+8G>A
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

17-3474811-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474811
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474811
    reference: chr 17
allele count: 1
allele frequency: 3.007880647295915e-5
allele num: 33246
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2341+7C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2167+7C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2347+7C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2434+7C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2317+7C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2347+7C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2347+7C>T
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2347+7C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2380+7C>T
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35512
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7954
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4456
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6179
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7668
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 3.25e1
  variant carriers: 0
hgvs: c.2347+7C>T
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

17-3474830-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474830
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474830
    reference: chr 17
allele count: 12
allele frequency: 2.226510316164465e-4
allele num: 53896
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2329C>T
  hgvsp: ENSP00000174621.6:p.Arg777Trp
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2155C>T
  hgvsp: ENSP00000311692.5:p.Arg719Trp
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2335C>T
  hgvsp: ENSP00000461007.1:p.Arg779Trp
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2335C>T
  hgvsp: ENSP00000459962.1:p.Arg779Trp
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2368C>T
  hgvsp: ENSP00000409627.2:p.Arg790Trp
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2422C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2335C>T
  hgvsp: ENSP00000382661.3:p.Arg779Trp
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2305C>T
  hgvsp: ENSP00000459042.1:p.Arg769Trp
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2335C>T
  hgvsp: ENSP00000382659.4:p.Arg779Trp
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14865
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31020
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4693
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2133
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1667
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1641
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg779Trp
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

17-3474850-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474850
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474850
    reference: chr 17
allele count: 1
allele frequency: 1.291055567031605e-5
allele num: 77456
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2315G>A
  hgvsp: ENSP00000459962.1:p.Arg772His
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2315G>A
  hgvsp: ENSP00000461007.1:p.Arg772His
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2135G>A
  hgvsp: ENSP00000311692.5:p.Arg712His
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2309G>A
  hgvsp: ENSP00000174621.6:p.Arg770His
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2315G>A
  hgvsp: ENSP00000382659.4:p.Arg772His
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2348G>A
  hgvsp: ENSP00000409627.2:p.Arg783His
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2315G>A
  hgvsp: ENSP00000382661.3:p.Arg772His
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2285G>A
  hgvsp: ENSP00000459042.1:p.Arg762His
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2402G>A
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20917
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2000
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2718
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg772His
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

17-3474853-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474853
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474853
    reference: chr 17
allele count: 1
allele frequency: 1.208342395901303e-5
allele num: 82758
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2282A>G
  hgvsp: ENSP00000459042.1:p.Lys761Arg
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2312A>G
  hgvsp: ENSP00000461007.1:p.Lys771Arg
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2306A>G
  hgvsp: ENSP00000174621.6:p.Lys769Arg
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2312A>G
  hgvsp: ENSP00000459962.1:p.Lys771Arg
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2345A>G
  hgvsp: ENSP00000409627.2:p.Lys782Arg
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2312A>G
  hgvsp: ENSP00000382661.3:p.Lys771Arg
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2132A>G
  hgvsp: ENSP00000311692.5:p.Lys711Arg
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2399A>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2312A>G
  hgvsp: ENSP00000382659.4:p.Lys771Arg
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18593
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1137
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys771Arg
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

17-3474854-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474854
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474854
    reference: chr 17
allele count: 1
allele frequency: 1.192435191147361e-5
allele num: 83862
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2305A>G
  hgvsp: ENSP00000174621.6:p.Lys769Glu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2311A>G
  hgvsp: ENSP00000459962.1:p.Lys771Glu
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2311A>G
  hgvsp: ENSP00000382661.3:p.Lys771Glu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2344A>G
  hgvsp: ENSP00000409627.2:p.Lys782Glu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2311A>G
  hgvsp: ENSP00000461007.1:p.Lys771Glu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2281A>G
  hgvsp: ENSP00000459042.1:p.Lys761Glu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2311A>G
  hgvsp: ENSP00000382659.4:p.Lys771Glu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2131A>G
  hgvsp: ENSP00000311692.5:p.Lys711Glu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2398A>G
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4433
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18056
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28907
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29768
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Lys771Glu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD

17-3474857-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474857
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474857
    reference: chr 17
allele count: 9
allele frequency: 1.044471265434964e-4
allele num: 86168
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2308G>A
  hgvsp: ENSP00000382661.3:p.Val770Ile
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2308G>A
  hgvsp: ENSP00000459962.1:p.Val770Ile
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2308G>A
  hgvsp: ENSP00000461007.1:p.Val770Ile
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2395G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2278G>A
  hgvsp: ENSP00000459042.1:p.Val760Ile
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2308G>A
  hgvsp: ENSP00000382659.4:p.Val770Ile
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2128G>A
  hgvsp: ENSP00000311692.5:p.Val710Ile
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2302G>A
  hgvsp: ENSP00000174621.6:p.Val768Ile
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2341G>A
  hgvsp: ENSP00000409627.2:p.Val781Ile
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16760
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3283
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4776
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29910
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2202
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val770Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/17-3474860-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474860
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474860
    reference: chr 17
allele count: 2
allele frequency: 2.244467387888854e-5
allele num: 89108
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2125G>T
  hgvsp: ENSP00000311692.5:p.Gly709Cys
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2305G>T
  hgvsp: ENSP00000382659.4:p.Gly769Cys
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2305G>T
  hgvsp: ENSP00000461007.1:p.Gly769Cys
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2275G>T
  hgvsp: ENSP00000459042.1:p.Gly759Cys
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2299G>T
  hgvsp: ENSP00000174621.6:p.Gly767Cys
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2392G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2305G>T
  hgvsp: ENSP00000382661.3:p.Gly769Cys
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2338G>T
  hgvsp: ENSP00000409627.2:p.Gly780Cys
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2305G>T
  hgvsp: ENSP00000459962.1:p.Gly769Cys
  variant of: http://identifiers.org/hgnc/1492
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15508
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly769Cys
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

17-3474861-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474861
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474861
    reference: chr 17
allele count: 1
allele frequency: 1.113709767234659e-5
allele num: 89790
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2274G>A
  hgvsp: ENST00000576351.1:c.2274G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2391G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2337G>A
  hgvsp: ENST00000425167.2:c.2337G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2304G>A
  hgvsp: ENST00000571088.1:c.2304G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2304G>A
  hgvsp: ENST00000572705.1:c.2304G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2304G>A
  hgvsp: ENST00000399756.4:c.2304G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2298G>A
  hgvsp: ENST00000174621.6:c.2298G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2124G>A
  hgvsp: ENST00000310522.5:c.2124G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2304G>A
  hgvsp: ENST00000399759.3:c.2304G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31308
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5183
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 820
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu768Glu
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

17-3474865-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474865
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474865
    reference: chr 17
allele count: 2
allele frequency: 2.177510669802282e-5
allele num: 91848
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2300G>A
  hgvsp: ENSP00000461007.1:p.Cys767Tyr
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2300G>A
  hgvsp: ENSP00000459962.1:p.Cys767Tyr
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2294G>A
  hgvsp: ENSP00000174621.6:p.Cys765Tyr
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2300G>A
  hgvsp: ENSP00000382659.4:p.Cys767Tyr
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2333G>A
  hgvsp: ENSP00000409627.2:p.Cys778Tyr
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2300G>A
  hgvsp: ENSP00000382661.3:p.Cys767Tyr
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2270G>A
  hgvsp: ENSP00000459042.1:p.Cys757Tyr
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2120G>A
  hgvsp: ENSP00000311692.5:p.Cys707Tyr
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2387G>A
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3086
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32070
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14242
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5491
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2719
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Cys767Tyr
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

17-3474873-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474873
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474873
    reference: chr 17
allele count: 1
allele frequency: 1.05909764880322e-5
allele num: 94420
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2379G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2292G>A
  hgvsp: ENST00000571088.1:c.2292G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2112G>A
  hgvsp: ENST00000310522.5:c.2112G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2262G>A
  hgvsp: ENST00000576351.1:c.2262G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2286G>A
  hgvsp: ENST00000174621.6:c.2286G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2292G>A
  hgvsp: ENST00000572705.1:c.2292G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2325G>A
  hgvsp: ENST00000425167.2:c.2325G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2292G>A
  hgvsp: ENST00000399756.4:c.2292G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2292G>A
  hgvsp: ENST00000399759.3:c.2292G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12871
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32727
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro764Pro
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

17-3474882-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474882
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474882
    reference: chr 17
allele count: 1
allele frequency: 1.037731933087045e-5
allele num: 96364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2103C>T
  hgvsp: ENST00000310522.5:c.2103C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2370C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2283C>T
  hgvsp: ENST00000571088.1:c.2283C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2283C>T
  hgvsp: ENST00000399759.3:c.2283C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2316C>T
  hgvsp: ENST00000425167.2:c.2316C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2253C>T
  hgvsp: ENST00000576351.1:c.2253C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2283C>T
  hgvsp: ENST00000572705.1:c.2283C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2277C>T
  hgvsp: ENST00000174621.6:c.2277C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2283C>T
  hgvsp: ENST00000399756.4:c.2283C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12021
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32674
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asn761Asn
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

17-3474888-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474888
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474888
    reference: chr 17
allele count: 1
allele frequency: 1.039328178265569e-5
allele num: 96216
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2277C>T
  hgvsp: ENST00000571088.1:c.2277C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2277C>T
  hgvsp: ENST00000399759.3:c.2277C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2277C>T
  hgvsp: ENST00000572705.1:c.2277C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2097C>T
  hgvsp: ENST00000310522.5:c.2097C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2310C>T
  hgvsp: ENST00000425167.2:c.2310C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2247C>T
  hgvsp: ENST00000576351.1:c.2247C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2271C>T
  hgvsp: ENST00000174621.6:c.2271C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2277C>T
  hgvsp: ENST00000399756.4:c.2277C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2364C>T
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6585
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4331
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34090
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile759Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD

17-3474894-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474894
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474894
    reference: chr 17
allele count: 102
allele frequency: 1.071271031570988e-3
allele num: 95214
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2241G>A
  hgvsp: ENST00000576351.1:c.2241G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2304G>A
  hgvsp: ENST00000425167.2:c.2304G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2271G>A
  hgvsp: ENST00000571088.1:c.2271G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2091G>A
  hgvsp: ENST00000310522.5:c.2091G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2358G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2271G>A
  hgvsp: ENST00000399756.4:c.2271G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2271G>A
  hgvsp: ENST00000572705.1:c.2271G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2265G>A
  hgvsp: ENST00000174621.6:c.2265G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2271G>A
  hgvsp: ENST00000399759.3:c.2271G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12528
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 5515
  bin: 1.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29515
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 1.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6783
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Val757Val
num of homozygotes: 1
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

17-3474896-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474896
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474896
    reference: chr 17
allele count: 1
allele frequency: 1.060580349567283e-5
allele num: 94288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2239G>A
  hgvsp: ENSP00000459042.1:p.Val747Met
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2089G>A
  hgvsp: ENSP00000311692.5:p.Val697Met
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2269G>A
  hgvsp: ENSP00000461007.1:p.Val757Met
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2263G>A
  hgvsp: ENSP00000174621.6:p.Val755Met
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2302G>A
  hgvsp: ENSP00000409627.2:p.Val768Met
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2269G>A
  hgvsp: ENSP00000382659.4:p.Val757Met
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2269G>A
  hgvsp: ENSP00000459962.1:p.Val757Met
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2356G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2269G>A
  hgvsp: ENSP00000382661.3:p.Val757Met
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12942
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28196
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6260
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1135
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val757Met
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

17-3474897-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474897
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474897
    reference: chr 17
allele count: 5
allele frequency: 5.2999788000848e-5
allele num: 94340
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2268C>T
  hgvsp: ENST00000572705.1:c.2268C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2262C>T
  hgvsp: ENST00000174621.6:c.2262C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2268C>T
  hgvsp: ENST00000399759.3:c.2268C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2301C>T
  hgvsp: ENST00000425167.2:c.2301C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2238C>T
  hgvsp: ENST00000576351.1:c.2238C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2268C>T
  hgvsp: ENST00000571088.1:c.2268C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2268C>T
  hgvsp: ENST00000399756.4:c.2268C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2088C>T
  hgvsp: ENST00000310522.5:c.2088C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2355C>T
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28173
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12923
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6282
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6806
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2378
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asn756Asn
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

17-3474911-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474911
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474911
    reference: chr 17
allele count: 1
allele frequency: 1.103436100015448e-5
allele num: 90626
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2254A>G
  hgvsp: ENSP00000461007.1:p.Thr752Ala
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2341A>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2254A>G
  hgvsp: ENSP00000459962.1:p.Thr752Ala
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2248A>G
  hgvsp: ENSP00000174621.6:p.Thr750Ala
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2287A>G
  hgvsp: ENSP00000409627.2:p.Thr763Ala
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2074A>G
  hgvsp: ENSP00000311692.5:p.Thr692Ala
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2254A>G
  hgvsp: ENSP00000382659.4:p.Thr752Ala
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2254A>G
  hgvsp: ENSP00000382661.3:p.Thr752Ala
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2224A>G
  hgvsp: ENSP00000459042.1:p.Thr742Ala
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14590
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23189
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9700
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6342
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21524
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2062
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr752Ala
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff

17-3474912-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474912
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474912
    reference: chr 17
allele count: 1
allele frequency: 1.109877913429523e-5
allele num: 90100
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2286C>T
  hgvsp: ENST00000425167.2:c.2286C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2253C>T
  hgvsp: ENST00000399756.4:c.2253C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2253C>T
  hgvsp: ENST00000571088.1:c.2253C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2073C>T
  hgvsp: ENST00000310522.5:c.2073C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2247C>T
  hgvsp: ENST00000174621.6:c.2247C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2253C>T
  hgvsp: ENST00000572705.1:c.2253C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2223C>T
  hgvsp: ENST00000576351.1:c.2223C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2340C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2253C>T
  hgvsp: ENST00000399759.3:c.2253C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10015
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22630
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6302
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14755
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25674
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2718
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr751Thr
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

17-3474924-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474924
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474924
    reference: chr 17
allele count: 1
allele frequency: 1.235116842053258e-5
allele num: 80964
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2241G>C
  hgvsp: ENSP00000382661.3:p.Glu747Asp
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2328G>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2274G>C
  hgvsp: ENSP00000409627.2:p.Glu758Asp
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2061G>C
  hgvsp: ENSP00000311692.5:p.Glu687Asp
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2211G>C
  hgvsp: ENSP00000459042.1:p.Glu737Asp
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2241G>C
  hgvsp: ENSP00000461007.1:p.Glu747Asp
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2241G>C
  hgvsp: ENSP00000459962.1:p.Glu747Asp
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2235G>C
  hgvsp: ENSP00000174621.6:p.Glu745Asp
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2241G>C
  hgvsp: ENSP00000382659.4:p.Glu747Asp
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18098
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12738
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16341
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2717
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2718
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu747Asp
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

17-3474926-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474926
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474926
    reference: chr 17
allele count: 4
allele frequency: 4.953315006067811e-5
allele num: 80754
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2239G>A
  hgvsp: ENSP00000459962.1:p.Glu747Lys
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2239G>A
  hgvsp: ENSP00000382661.3:p.Glu747Lys
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2326G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2209G>A
  hgvsp: ENSP00000459042.1:p.Glu737Lys
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2239G>A
  hgvsp: ENSP00000382659.4:p.Glu747Lys
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2233G>A
  hgvsp: ENSP00000174621.6:p.Glu745Lys
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2059G>A
  hgvsp: ENSP00000311692.5:p.Glu687Lys
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2239G>A
  hgvsp: ENSP00000461007.1:p.Glu747Lys
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2272G>A
  hgvsp: ENSP00000409627.2:p.Glu758Lys
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16366
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12723
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29896
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1820
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2175
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu747Lys
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

17-3474927-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474927
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474927
    reference: chr 17
allele count: 1292
allele frequency: 1.614878884083694e-2
allele num: 80006
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2238C>T
  hgvsp: ENST00000572705.1:c.2238C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2232C>T
  hgvsp: ENST00000174621.6:c.2232C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2238C>T
  hgvsp: ENST00000399759.3:c.2238C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2271C>T
  hgvsp: ENST00000425167.2:c.2271C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2208C>T
  hgvsp: ENST00000576351.1:c.2208C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2238C>T
  hgvsp: ENST00000571088.1:c.2238C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2325C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2058C>T
  hgvsp: ENST00000310522.5:c.2058C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2238C>T
  hgvsp: ENST00000399756.4:c.2238C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16809
  bin: 1.25e1
  variant carriers: 259
genotype depth: GenotypeDepth
  all individuals: 12090
  bin: 2.25e1
  variant carriers: 257
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4349
  bin: 2.75e1
  variant carriers: 153
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 18334
  bin: 7.5e0
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 3.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 3157
  bin: 1.75e1
  variant carriers: 344
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 4.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 3.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 9.75e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1962
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 7.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2009
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp746Asp
num of homozygotes: 10
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum

17-3474945-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474945
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474945
    reference: chr 17
allele count: 1
allele frequency: 1.546838262591263e-5
allele num: 64648
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2319-12C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2232-12C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2265-12C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2232-12C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2232-12C>T
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2052-12C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2226-12C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2232-12C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2202-12C>T
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21054
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5073
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19328
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6946
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3261
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1543
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

17-3474946-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474946
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474946
    reference: chr 17
allele count: 1
allele frequency: 1.550628004341758e-5
allele num: 64490
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2265-13C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2232-13C>T
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2226-13C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2319-13C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2232-13C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2232-13C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2232-13C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2052-13C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2202-13C>T
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6497
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32247
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1526
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP

17-3474950-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474950
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474950
    reference: chr 17
allele count: 2
allele frequency: 3.337115397450444e-5
allele num: 59932
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2202-17G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2232-17G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2232-17G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2052-17G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2226-17G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2232-17G>A
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2319-17G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2265-17G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2232-17G>A
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21680
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1944
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3176
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2036
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8735
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

17-3474951-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474951
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474951
    reference: chr 17
allele count: 3
allele frequency: 5.255228952808044e-5
allele num: 57086
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2319-18C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2232-18C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2232-18C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2052-18C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2226-18C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2232-18C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2232-18C>T
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2202-18C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2265-18C>T
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21908
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8992
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4206
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17345
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2225
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3096
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9725
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ

17-3474956-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474956
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474956
    reference: chr 17
allele count: 1
allele frequency: 1.915488641152358e-5
allele num: 52206
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2319-23T>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2265-23T>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2232-23T>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2202-23T>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2232-23T>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2226-23T>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2232-23T>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2232-23T>C
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2052-23T>C
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23029
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10767
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15168
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

17-3474959-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474959
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474959
    reference: chr 17
allele count: 1
allele frequency: 2.001681412386405e-5
allele num: 49958
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2232-26G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2232-26G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2052-26G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2226-26G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2232-26G>A
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2202-26G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2319-26G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2265-26G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2232-26G>A
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11499
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14343
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2763
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2728
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2082
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25762
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

17-3474968-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474968
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474968
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 42818
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2232-35C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2232-35C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2226-35C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2232-35C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2232-35C>T
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2265-35C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2052-35C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2319-35C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2202-35C>T
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13632
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3025
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11135
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24642
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5509
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2731
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/17-3474980-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474980
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474980
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 35368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2232-47G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2202-47G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2232-47G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2319-47G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2226-47G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2232-47G>T
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2232-47G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2265-47G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2052-47G>T
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 7727
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2231
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27354
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14233
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2131
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14886
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1057
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7407
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
reference allele: C
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff

17-3474981-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474981
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474981
    reference: chr 17
allele count: 1
allele frequency: 2.888503755054882e-5
allele num: 34620
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2265-48G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2052-48G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2226-48G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2232-48G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2232-48G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2319-48G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2202-48G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2232-48G>A
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2232-48G>A
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27467
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14225
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2034
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14658
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2731
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2003
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12386
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum

17-3474982-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474982
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474982
    reference: chr 17
allele count: 2
allele frequency: 5.861321141785358e-5
allele num: 34122
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2232-49C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2319-49C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2052-49C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2232-49C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2226-49C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2232-49C>T
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2232-49C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2202-49C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2265-49C>T
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27521
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 14266
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7550
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14306
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10151
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 4.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

17-3474982-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474982
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474982
    reference: chr 17
allele count: 1
allele frequency: 2.930660570892679e-5
allele num: 34122
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2232-49C>A
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2265-49C>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2319-49C>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2052-49C>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2232-49C>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2202-49C>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2232-49C>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2232-49C>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2226-49C>A
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14266
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27521
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7550
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10151
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7353
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14306
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2045
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2817
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

17-3474983-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3474983
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3474983
    reference: chr 17
allele count: 3
allele frequency: 8.690110654075662e-5
allele num: 34522
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2202-50C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2232-50C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2232-50C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2226-50C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2052-50C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2319-50C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2265-50C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2232-50C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2232-50C>T
  variant of: http://identifiers.org/hgnc/1492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14291
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27494
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7573
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2088
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1084
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2349
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9947
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

17-3475367-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475367
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475367
    reference: chr 17
allele count: 4
allele frequency: 3.622794623772778e-5
allele num: 110412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2264+49A>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2318+49A>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2051+49A>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2225+49A>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2231+49A>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2201+49A>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2231+49A>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2231+49A>G
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2231+49A>G
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12051
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4538
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13126
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6052
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16903
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7546
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4392
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4100
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3323
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1768
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP

17-3475367-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475367
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475367
    reference: chr 17
allele count: 106214
allele frequency: 9.619787704235047e-1
allele num: 110412
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2231+49A>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2318+49A>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2231+49A>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2231+49A>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2051+49A>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2264+49A>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2225+49A>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2201+49A>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2231+49A>C
  variant of: http://identifiers.org/hgnc/1492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.75e1
  variant carriers: 320
genotype depth: GenotypeDepth
  all individuals: 6052
  bin: 2.75e1
  variant carriers: 5824
genotype depth: GenotypeDepth
  all individuals: 16903
  bin: 1.75e1
  variant carriers: 16772
genotype depth: GenotypeDepth
  all individuals: 13126
  bin: 1.25e1
  variant carriers: 13009
genotype depth: GenotypeDepth
  all individuals: 4538
  bin: 7.5e0
  variant carriers: 4454
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 2.5e0
  variant carriers: 316
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 4.75e1
  variant carriers: 568
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 3.75e1
  variant carriers: 1285
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 4.25e1
  variant carriers: 745
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 180
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 5.25e1
  variant carriers: 403
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.75e1
  variant carriers: 233
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 3.25e1
  variant carriers: 2576
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 259
genotype depth: GenotypeDepth
  all individuals: 12051
  bin: 2.25e1
  variant carriers: 11834
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 234
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.75e1
  variant carriers: 114
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.25e1
  variant carriers: 97
genotype quality: GenotypeQuality
  all individuals: 5496
  bin: 3.75e1
  variant carriers: 5448
genotype quality: GenotypeQuality
  all individuals: 1964
  bin: 8.25e1
  variant carriers: 1948
genotype quality: GenotypeQuality
  all individuals: 1619
  bin: 2.75e1
  variant carriers: 1596
genotype quality: GenotypeQuality
  all individuals: 4392
  bin: 6.75e1
  variant carriers: 4288
genotype quality: GenotypeQuality
  all individuals: 960
  bin: 1.75e1
  variant carriers: 946
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 7.5e0
  variant carriers: 170
num of homozygotes: 51827
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

17-3475375-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475375
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475375
    reference: chr 17
allele count: 2
allele frequency: 1.820763992571283e-5
allele num: 109844
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2231+41T>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2201+41T>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2264+41T>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2225+41T>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2231+41T>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2231+41T>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2318+41T>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2051+41T>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2231+41T>C
  variant of: http://identifiers.org/hgnc/1492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11942
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4987
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13493
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16106
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13643
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2071
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4275
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5751
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2956
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-3475381-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475381
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475381
    reference: chr 17
allele count: 1679
allele frequency: 1.523040638606676e-2
allele num: 110240
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2225+35G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2231+35G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2231+35G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2051+35G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2201+35G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2231+35G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2264+35G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2231+35G>A
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2318+35G>A
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 6905
  bin: 2.75e1
  variant carriers: 266
genotype depth: GenotypeDepth
  all individuals: 4849
  bin: 7.5e0
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 20984
  bin: 2.25e1
  variant carriers: 407
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12272
  bin: 1.25e1
  variant carriers: 228
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 3.25e1
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 5.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7556
  bin: 1.75e1
  variant carriers: 414
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 3.75e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2256
  bin: 4.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2042
  bin: 7.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 5.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 5294
  bin: 2.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 8.75e1
  variant carriers: 12
num of homozygotes: 21
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/17-3475387-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475387
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475387
    reference: chr 17
allele count: 1
allele frequency: 9.04093736438594e-6
allele num: 110608
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2264+29G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2231+29G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2318+29G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2231+29G>T
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2225+29G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2201+29G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2051+29G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2231+29G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2231+29G>T
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4757
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7448
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4949
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10473
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24831
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4128
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4703
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2560
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1716
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4769
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

17-3475391-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475391
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475391
    reference: chr 17
allele count: 1
allele frequency: 9.006412565746812e-6
allele num: 111032
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2231+25C>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2318+25C>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2225+25C>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2231+25C>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2231+25C>G
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2231+25C>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2201+25C>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2264+25C>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2051+25C>G
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9238
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1351
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3379
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 891
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1845
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

17-3475400-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475400
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475400
    reference: chr 17
allele count: 1
allele frequency: 8.914721771533511e-6
allele num: 112174
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2231+16C>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2051+16C>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2231+16C>A
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2201+16C>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2231+16C>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2318+16C>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2225+16C>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2264+16C>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2231+16C>A
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6677
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8962
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4435
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3025
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4610
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2165
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2066
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-3475405-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475405
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475405
    reference: chr 17
allele count: 115307
allele frequency: 9.636058230683091e-1
allele num: 119662
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2231+11G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2051+11G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2201+11G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2225+11G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2231+11G>A
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2264+11G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2318+11G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2231+11G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2231+11G>A
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 6.25e1
  variant carriers: 754
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.75e1
  variant carriers: 385
genotype depth: GenotypeDepth
  all individuals: 2287
  bin: 1.25e1
  variant carriers: 2253
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.5e0
  variant carriers: 452
genotype depth: GenotypeDepth
  all individuals: 5577
  bin: 1.75e1
  variant carriers: 5568
genotype depth: GenotypeDepth
  all individuals: 9244
  bin: 2.25e1
  variant carriers: 8933
genotype depth: GenotypeDepth
  all individuals: 9733
  bin: 3.25e1
  variant carriers: 9640
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 7.25e1
  variant carriers: 407
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 9.75e1
  variant carriers: 1420
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 4.75e1
  variant carriers: 2711
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 8.25e1
  variant carriers: 342
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.75e1
  variant carriers: 222
genotype depth: GenotypeDepth
  all individuals: 4779
  bin: 4.25e1
  variant carriers: 4756
genotype depth: GenotypeDepth
  all individuals: 7338
  bin: 3.75e1
  variant carriers: 7302
genotype depth: GenotypeDepth
  all individuals: 11097
  bin: 2.75e1
  variant carriers: 10827
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 6.75e1
  variant carriers: 511
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 5.75e1
  variant carriers: 1062
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 218
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 5.25e1
  variant carriers: 1769
genotype quality: GenotypeQuality
  all individuals: 3754
  bin: 6.75e1
  variant carriers: 3646
genotype quality: GenotypeQuality
  all individuals: 28126
  bin: 9.75e1
  variant carriers: 28090
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 3.25e1
  variant carriers: 579
genotype quality: GenotypeQuality
  all individuals: 2165
  bin: 8.75e1
  variant carriers: 2157
genotype quality: GenotypeQuality
  all individuals: 1430
  bin: 5.75e1
  variant carriers: 1425
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 27
num of homozygotes: 56286
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

http://identifiers.org/exac.variant/17-3475415-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475415
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475415
    reference: chr 17
allele count: 1
allele frequency: 8.46123906384851e-6
allele num: 118186
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2231+1G>T
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2201+1G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2231+1G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2051+1G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2264+1G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2225+1G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2231+1G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2318+1G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2231+1G>T
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17805
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6745
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21794
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2040
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7033
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2564
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 9.25e1
  variant carriers: 0
hgvs: c.2231+1G>T
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

17-3475417-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475417
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475417
    reference: chr 17
allele count: 6
allele frequency: 5.078978109604347e-5
allele num: 118134
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2230A>G
  hgvsp: ENSP00000382661.3:p.Arg744Gly
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2317A>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2230A>G
  hgvsp: ENSP00000382659.4:p.Arg744Gly
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2230A>G
  hgvsp: ENSP00000461007.1:p.Arg744Gly
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2224A>G
  hgvsp: ENSP00000174621.6:p.Arg742Gly
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2050A>G
  hgvsp: ENSP00000311692.5:p.Arg684Gly
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2263A>G
  hgvsp: ENSP00000409627.2:p.Arg755Gly
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2230A>G
  hgvsp: ENSP00000459962.1:p.Arg744Gly
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2200A>G
  hgvsp: ENSP00000459042.1:p.Arg734Gly
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6739
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21847
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2478
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6993
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg744Gly
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/17-3475426-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475426
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475426
    reference: chr 17
allele count: 12
allele frequency: 1.016604540833616e-4
allele num: 118040
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2308T>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2221T>G
  hgvsp: ENSP00000459962.1:p.Trp741Gly
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2041T>G
  hgvsp: ENSP00000311692.5:p.Trp681Gly
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2221T>G
  hgvsp: ENSP00000461007.1:p.Trp741Gly
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2254T>G
  hgvsp: ENSP00000409627.2:p.Trp752Gly
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2221T>G
  hgvsp: ENSP00000382661.3:p.Trp741Gly
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2221T>G
  hgvsp: ENSP00000382659.4:p.Trp741Gly
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2215T>G
  hgvsp: ENSP00000174621.6:p.Trp739Gly
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2191T>G
  hgvsp: ENSP00000459042.1:p.Trp731Gly
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22067
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6685
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18968
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1420
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Trp741Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff

17-3475428-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475428
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475428
    reference: chr 17
allele count: 15
allele frequency: 1.271833135492623e-4
allele num: 117940
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2213G>A
  hgvsp: ENSP00000174621.6:p.Arg738Gln
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2306G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2219G>A
  hgvsp: ENSP00000382661.3:p.Arg740Gln
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2189G>A
  hgvsp: ENSP00000459042.1:p.Arg730Gln
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2252G>A
  hgvsp: ENSP00000409627.2:p.Arg751Gln
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2039G>A
  hgvsp: ENSP00000311692.5:p.Arg680Gln
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2219G>A
  hgvsp: ENSP00000382659.4:p.Arg740Gln
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2219G>A
  hgvsp: ENSP00000461007.1:p.Arg740Gln
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2219G>A
  hgvsp: ENSP00000459962.1:p.Arg740Gln
  variant of: http://identifiers.org/hgnc/1492
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18982
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6731
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22123
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35428
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2287
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg740Gln
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/17-3475435-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475435
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475435
    reference: chr 17
allele count: 9
allele frequency: 7.63890067731586e-5
allele num: 117818
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2212G>T
  hgvsp: ENSP00000382659.4:p.Asp738Tyr
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2212G>T
  hgvsp: ENSP00000459962.1:p.Asp738Tyr
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2212G>T
  hgvsp: ENSP00000382661.3:p.Asp738Tyr
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2182G>T
  hgvsp: ENSP00000459042.1:p.Asp728Tyr
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2206G>T
  hgvsp: ENSP00000174621.6:p.Asp736Tyr
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2245G>T
  hgvsp: ENSP00000409627.2:p.Asp749Tyr
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2212G>T
  hgvsp: ENSP00000461007.1:p.Asp738Tyr
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2032G>T
  hgvsp: ENSP00000311692.5:p.Asp678Tyr
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2299G>T
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19263
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22293
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6657
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6816
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp738Tyr
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP

17-3475435-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475435
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475435
    reference: chr 17
allele count: 2
allele frequency: 1.697533483847969e-5
allele num: 117818
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2206G>A
  hgvsp: ENSP00000174621.6:p.Asp736Asn
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2032G>A
  hgvsp: ENSP00000311692.5:p.Asp678Asn
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2245G>A
  hgvsp: ENSP00000409627.2:p.Asp749Asn
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2212G>A
  hgvsp: ENSP00000382659.4:p.Asp738Asn
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2212G>A
  hgvsp: ENSP00000461007.1:p.Asp738Asn
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2212G>A
  hgvsp: ENSP00000459962.1:p.Asp738Asn
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2299G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2182G>A
  hgvsp: ENSP00000459042.1:p.Asp728Asn
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2212G>A
  hgvsp: ENSP00000382661.3:p.Asp738Asn
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19263
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2199
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4514
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp738Asn
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD

17-3475436-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475436
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475436
    reference: chr 17
allele count: 25
allele frequency: 2.123106189279163e-4
allele num: 117752
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2031C>T
  hgvsp: ENST00000310522.5:c.2031C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2244C>T
  hgvsp: ENST00000425167.2:c.2244C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2181C>T
  hgvsp: ENST00000576351.1:c.2181C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2211C>T
  hgvsp: ENST00000571088.1:c.2211C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2211C>T
  hgvsp: ENST00000572705.1:c.2211C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2211C>T
  hgvsp: ENST00000399759.3:c.2211C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2205C>T
  hgvsp: ENST00000174621.6:c.2205C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2298C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2211C>T
  hgvsp: ENST00000399756.4:c.2211C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22357
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6686
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 19195
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2322
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 9.25e1
  variant carriers: 1
hgvs: p.Asp737Asp
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

17-3475436-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475436
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475436
    reference: chr 17
allele count: 2
allele frequency: 1.69848495142333e-5
allele num: 117752
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2244C>G
  hgvsp: ENSP00000409627.2:p.Asp748Glu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2211C>G
  hgvsp: ENSP00000382661.3:p.Asp737Glu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2205C>G
  hgvsp: ENSP00000174621.6:p.Asp735Glu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2211C>G
  hgvsp: ENSP00000461007.1:p.Asp737Glu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2298C>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2211C>G
  hgvsp: ENSP00000459962.1:p.Asp737Glu
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2181C>G
  hgvsp: ENSP00000459042.1:p.Asp727Glu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2031C>G
  hgvsp: ENSP00000311692.5:p.Asp677Glu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2211C>G
  hgvsp: ENSP00000382659.4:p.Asp737Glu
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22357
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6686
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp737Glu
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

17-3475439-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475439
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475439
    reference: chr 17
allele count: 1
allele frequency: 8.499498529586754e-6
allele num: 117654
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2241G>A
  hgvsp: ENST00000425167.2:c.2241G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2295G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2028G>A
  hgvsp: ENST00000310522.5:c.2028G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2208G>A
  hgvsp: ENST00000571088.1:c.2208G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2208G>A
  hgvsp: ENST00000572705.1:c.2208G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2208G>A
  hgvsp: ENST00000399756.4:c.2208G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2178G>A
  hgvsp: ENST00000576351.1:c.2178G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2208G>A
  hgvsp: ENST00000399759.3:c.2208G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2202G>A
  hgvsp: ENST00000174621.6:c.2202G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6638
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19202
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Lys736Lys
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS

17-3475441-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475441
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475441
    reference: chr 17
allele count: 38
allele frequency: 3.233217050965711e-4
allele num: 117530
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2206A>G
  hgvsp: ENSP00000461007.1:p.Lys736Glu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2200A>G
  hgvsp: ENSP00000174621.6:p.Lys734Glu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2176A>G
  hgvsp: ENSP00000459042.1:p.Lys726Glu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2293A>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2239A>G
  hgvsp: ENSP00000409627.2:p.Lys747Glu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2026A>G
  hgvsp: ENSP00000311692.5:p.Lys676Glu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2206A>G
  hgvsp: ENSP00000382661.3:p.Lys736Glu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2206A>G
  hgvsp: ENSP00000459962.1:p.Lys736Glu
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2206A>G
  hgvsp: ENSP00000382659.4:p.Lys736Glu
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18941
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22409
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6614
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2179
  bin: 3.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2703
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2156
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Lys736Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

17-3475442-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475442
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475442
    reference: chr 17
allele count: 2
allele frequency: 1.702243557008137e-5
allele num: 117492
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2205C>G
  hgvsp: ENST00000571088.1:c.2205C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2205C>G
  hgvsp: ENST00000572705.1:c.2205C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2238C>G
  hgvsp: ENST00000425167.2:c.2238C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2199C>G
  hgvsp: ENST00000174621.6:c.2199C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2205C>G
  hgvsp: ENST00000399759.3:c.2205C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2175C>G
  hgvsp: ENST00000576351.1:c.2175C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2025C>G
  hgvsp: ENST00000310522.5:c.2025C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2205C>G
  hgvsp: ENST00000399756.4:c.2205C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2292C>G
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22412
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4496
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly735Gly
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum

17-3475445-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475445
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475445
    reference: chr 17
allele count: 1
allele frequency: 8.517016999965932e-6
allele num: 117412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2172T>C
  hgvsp: ENST00000576351.1:c.2172T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2202T>C
  hgvsp: ENST00000399759.3:c.2202T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2202T>C
  hgvsp: ENST00000571088.1:c.2202T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2235T>C
  hgvsp: ENST00000425167.2:c.2235T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2022T>C
  hgvsp: ENST00000310522.5:c.2022T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2202T>C
  hgvsp: ENST00000572705.1:c.2202T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2196T>C
  hgvsp: ENST00000174621.6:c.2196T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2202T>C
  hgvsp: ENST00000399756.4:c.2202T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2289T>C
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22435
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19020
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2249
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp734Asp
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

17-3475455-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475455
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475455
    reference: chr 17
allele count: 1
allele frequency: 8.573829243616784e-6
allele num: 116634
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2225A>G
  hgvsp: ENSP00000409627.2:p.Tyr742Cys
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2192A>G
  hgvsp: ENSP00000459962.1:p.Tyr731Cys
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2192A>G
  hgvsp: ENSP00000382659.4:p.Tyr731Cys
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2012A>G
  hgvsp: ENSP00000311692.5:p.Tyr671Cys
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2186A>G
  hgvsp: ENSP00000174621.6:p.Tyr729Cys
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2192A>G
  hgvsp: ENSP00000461007.1:p.Tyr731Cys
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2162A>G
  hgvsp: ENSP00000459042.1:p.Tyr721Cys
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2192A>G
  hgvsp: ENSP00000382661.3:p.Tyr731Cys
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2279A>G
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6449
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22255
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2123
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Tyr731Cys
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

17-3475460-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475460
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475460
    reference: chr 17
allele count: 1
allele frequency: 8.619352169490942e-6
allele num: 116018
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.2007G>C
  hgvsp: ENST00000310522.5:c.2007G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2220G>C
  hgvsp: ENST00000425167.2:c.2220G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2187G>C
  hgvsp: ENST00000399759.3:c.2187G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2181G>C
  hgvsp: ENST00000174621.6:c.2181G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2187G>C
  hgvsp: ENST00000571088.1:c.2187G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2187G>C
  hgvsp: ENST00000399756.4:c.2187G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2274G>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2157G>C
  hgvsp: ENST00000576351.1:c.2157G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2187G>C
  hgvsp: ENST00000572705.1:c.2187G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1492
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6353
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22062
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2307
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17242
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3430
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34539
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val729Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP

17-3475482-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475482
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475482
    reference: chr 17
allele count: 6
allele frequency: 5.366534292154127e-5
allele num: 111804
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.1985G>A
  hgvsp: ENSP00000311692.5:p.Arg662His
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2252G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2159G>A
  hgvsp: ENSP00000174621.6:p.Arg720His
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2165G>A
  hgvsp: ENSP00000461007.1:p.Arg722His
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2165G>A
  hgvsp: ENSP00000382659.4:p.Arg722His
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2135G>A
  hgvsp: ENSP00000459042.1:p.Arg712His
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2198G>A
  hgvsp: ENSP00000409627.2:p.Arg733His
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2165G>A
  hgvsp: ENSP00000459962.1:p.Arg722His
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2165G>A
  hgvsp: ENSP00000382661.3:p.Arg722His
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3974
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14712
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7959
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4484
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2103
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4413
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1271
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg722His
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-3475483-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475483
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475483
    reference: chr 17
allele count: 1
allele frequency: 8.972311446874944e-6
allele num: 111454
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2134C>A
  hgvsp: ENSP00000459042.1:p.Arg712Ser
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2197C>A
  hgvsp: ENSP00000409627.2:p.Arg733Ser
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2251C>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2164C>A
  hgvsp: ENSP00000461007.1:p.Arg722Ser
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2158C>A
  hgvsp: ENSP00000174621.6:p.Arg720Ser
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2164C>A
  hgvsp: ENSP00000382661.3:p.Arg722Ser
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.1984C>A
  hgvsp: ENSP00000311692.5:p.Arg662Ser
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2164C>A
  hgvsp: ENSP00000459962.1:p.Arg722Ser
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2164C>A
  hgvsp: ENSP00000382659.4:p.Arg722Ser
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14727
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16727
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8236
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4478
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg722Ser
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

17-3475484-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475484
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475484
    reference: chr 17
allele count: 1
allele frequency: 8.977305372019535e-6
allele num: 111392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2196C>A
  hgvsp: ENSP00000409627.2:p.Phe732Leu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2163C>A
  hgvsp: ENSP00000461007.1:p.Phe721Leu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2250C>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2133C>A
  hgvsp: ENSP00000459042.1:p.Phe711Leu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2163C>A
  hgvsp: ENSP00000459962.1:p.Phe721Leu
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2157C>A
  hgvsp: ENSP00000174621.6:p.Phe719Leu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.1983C>A
  hgvsp: ENSP00000311692.5:p.Phe661Leu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2163C>A
  hgvsp: ENSP00000382661.3:p.Phe721Leu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2163C>A
  hgvsp: ENSP00000382659.4:p.Phe721Leu
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8493
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4478
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1719
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Phe721Leu
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS

17-3475486-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475486
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475486
    reference: chr 17
allele count: 1
allele frequency: 9.005114905266191e-6
allele num: 111048
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2131T>C
  hgvsp: ENSP00000459042.1:p.Phe711Leu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2161T>C
  hgvsp: ENSP00000461007.1:p.Phe721Leu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2161T>C
  hgvsp: ENSP00000382659.4:p.Phe721Leu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2194T>C
  hgvsp: ENSP00000409627.2:p.Phe732Leu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2161T>C
  hgvsp: ENSP00000382661.3:p.Phe721Leu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.1981T>C
  hgvsp: ENSP00000311692.5:p.Phe661Leu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2155T>C
  hgvsp: ENSP00000174621.6:p.Phe719Leu
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2248T>C
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2161T>C
  hgvsp: ENSP00000459962.1:p.Phe721Leu
  variant of: http://identifiers.org/hgnc/1492
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4647
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8914
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14727
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25363
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4477
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Phe721Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

17-3475488-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475488
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475488
    reference: chr 17
allele count: 1
allele frequency: 9.050592813829306e-6
allele num: 110490
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.1979C>G
  hgvsp: ENSP00000311692.5:p.Ala660Gly
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2129C>G
  hgvsp: ENSP00000459042.1:p.Ala710Gly
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2159C>G
  hgvsp: ENSP00000461007.1:p.Ala720Gly
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2153C>G
  hgvsp: ENSP00000174621.6:p.Ala718Gly
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2159C>G
  hgvsp: ENSP00000382661.3:p.Ala720Gly
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2159C>G
  hgvsp: ENSP00000459962.1:p.Ala720Gly
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2246C>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2192C>G
  hgvsp: ENSP00000409627.2:p.Ala731Gly
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2159C>G
  hgvsp: ENSP00000382659.4:p.Ala720Gly
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4853
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15224
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4542
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9416
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14538
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2984
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1909
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 5.75e1
  variant carriers: 1
hgvs: p.Ala720Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ

17-3475490-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475490
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475490
    reference: chr 17
allele count: 5796
allele frequency: 5.289093298291721e-2
allele num: 109584
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2244G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2127G>A
  hgvsp: ENST00000576351.1:c.2127G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.1977G>A
  hgvsp: ENST00000310522.5:c.1977G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2157G>A
  hgvsp: ENST00000571088.1:c.2157G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2157G>A
  hgvsp: ENST00000572705.1:c.2157G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2157G>A
  hgvsp: ENST00000399759.3:c.2157G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2151G>A
  hgvsp: ENST00000174621.6:c.2151G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2190G>A
  hgvsp: ENST00000425167.2:c.2190G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2157G>A
  hgvsp: ENST00000399756.4:c.2157G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4863
  bin: 1.75e1
  variant carriers: 777
genotype depth: GenotypeDepth
  all individuals: 5135
  bin: 7.5e0
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 14066
  bin: 2.25e1
  variant carriers: 1025
genotype depth: GenotypeDepth
  all individuals: 14148
  bin: 2.75e1
  variant carriers: 968
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 5.25e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 4.25e1
  variant carriers: 204
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 9.75e1
  variant carriers: 445
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.75e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 3.75e1
  variant carriers: 361
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.25e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.25e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 6.25e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 4176
  bin: 3.25e1
  variant carriers: 671
genotype depth: GenotypeDepth
  all individuals: 10140
  bin: 1.25e1
  variant carriers: 373
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.75e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 4.75e1
  variant carriers: 112
genotype quality: GenotypeQuality
  all individuals: 21495
  bin: 6.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.5e0
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2594
  bin: 2.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 1197
  bin: 7.75e1
  variant carriers: 32
hgvs: p.Lys719Lys
num of homozygotes: 184
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

17-3475496-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475496
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475496
    reference: chr 17
allele count: 1
allele frequency: 9.308906761989872e-6
allele num: 107424
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2151G>A
  hgvsp: ENSP00000461007.1:p.Met717Ile
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2238G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2121G>A
  hgvsp: ENSP00000459042.1:p.Met707Ile
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2151G>A
  hgvsp: ENSP00000382659.4:p.Met717Ile
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2184G>A
  hgvsp: ENSP00000409627.2:p.Met728Ile
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2151G>A
  hgvsp: ENSP00000382661.3:p.Met717Ile
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2145G>A
  hgvsp: ENSP00000174621.6:p.Met715Ile
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2151G>A
  hgvsp: ENSP00000459962.1:p.Met717Ile
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.1971G>A
  hgvsp: ENSP00000311692.5:p.Met657Ile
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13920
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12947
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4850
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3713
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1078
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Met717Ile
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP

17-3475502-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475502
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475502
    reference: chr 17
allele count: 1
allele frequency: 9.462349312087206e-6
allele num: 105682
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2145G>A
  hgvsp: ENST00000571088.1:c.2145G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2232G>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.1965G>A
  hgvsp: ENST00000310522.5:c.1965G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2139G>A
  hgvsp: ENST00000174621.6:c.2139G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2145G>A
  hgvsp: ENST00000399759.3:c.2145G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2115G>A
  hgvsp: ENST00000576351.1:c.2115G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2178G>A
  hgvsp: ENST00000425167.2:c.2178G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2145G>A
  hgvsp: ENST00000399756.4:c.2145G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2145G>A
  hgvsp: ENST00000572705.1:c.2145G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1492
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5838
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6931
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14324
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3752
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1415
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4372
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Lys715Lys
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

17-3475507-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475507
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475507
    reference: chr 17
allele count: 1
allele frequency: 9.516015454009097e-6
allele num: 105086
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2140C>T
  hgvsp: ENSP00000461007.1:p.Leu714Phe
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2134C>T
  hgvsp: ENSP00000174621.6:p.Leu712Phe
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2140C>T
  hgvsp: ENSP00000459962.1:p.Leu714Phe
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2110C>T
  hgvsp: ENSP00000459042.1:p.Leu704Phe
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2140C>T
  hgvsp: ENSP00000382661.3:p.Leu714Phe
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2227C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2173C>T
  hgvsp: ENSP00000409627.2:p.Leu725Phe
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2140C>T
  hgvsp: ENSP00000382659.4:p.Leu714Phe
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.1960C>T
  hgvsp: ENSP00000311692.5:p.Leu654Phe
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14977
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9787
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6035
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3018
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu714Phe
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

17-3475508-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475508
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475508
    reference: chr 17
allele count: 1
allele frequency: 9.527983688091925e-6
allele num: 104954
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2109C>T
  hgvsp: ENST00000576351.1:c.2109C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.1959C>T
  hgvsp: ENST00000310522.5:c.1959C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2226C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2133C>T
  hgvsp: ENST00000174621.6:c.2133C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2139C>T
  hgvsp: ENST00000571088.1:c.2139C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2139C>T
  hgvsp: ENST00000399759.3:c.2139C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2139C>T
  hgvsp: ENST00000399756.4:c.2139C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2172C>T
  hgvsp: ENST00000425167.2:c.2172C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2139C>T
  hgvsp: ENST00000572705.1:c.2139C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1492
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6120
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2983
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9535
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12293
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1343
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Phe713Phe
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/17-3475514-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475514
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475514
    reference: chr 17
allele count: 3
allele frequency: 2.895417519206269e-5
allele num: 103612
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2220G>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2127G>T
  hgvsp: ENSP00000174621.6:p.Lys709Asn
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2133G>T
  hgvsp: ENSP00000459962.1:p.Lys711Asn
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2133G>T
  hgvsp: ENSP00000382659.4:p.Lys711Asn
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2103G>T
  hgvsp: ENSP00000459042.1:p.Lys701Asn
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2166G>T
  hgvsp: ENSP00000409627.2:p.Lys722Asn
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2133G>T
  hgvsp: ENSP00000382661.3:p.Lys711Asn
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.1953G>T
  hgvsp: ENSP00000311692.5:p.Lys651Asn
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2133G>T
  hgvsp: ENSP00000461007.1:p.Lys711Asn
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11492
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7840
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16677
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7785
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6797
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1485
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys711Asn
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

17-3475521-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475521
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475521
    reference: chr 17
allele count: 2
allele frequency: 1.953506544246923e-5
allele num: 102380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2126C>T
  hgvsp: ENSP00000382661.3:p.Thr709Met
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2213C>T
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2126C>T
  hgvsp: ENSP00000459962.1:p.Thr709Met
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2096C>T
  hgvsp: ENSP00000459042.1:p.Thr699Met
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2126C>T
  hgvsp: ENSP00000461007.1:p.Thr709Met
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2159C>T
  hgvsp: ENSP00000409627.2:p.Thr720Met
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.1946C>T
  hgvsp: ENSP00000311692.5:p.Thr649Met
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2120C>T
  hgvsp: ENSP00000174621.6:p.Thr707Met
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2126C>T
  hgvsp: ENSP00000382659.4:p.Thr709Met
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17539
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8199
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6955
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11384
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6524
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16987
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2742
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr709Met
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-3475522-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475522
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475522
    reference: chr 17
allele count: 1
allele frequency: 9.761240067938231e-6
allele num: 102446
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2125A>G
  hgvsp: ENSP00000461007.1:p.Thr709Ala
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2125A>G
  hgvsp: ENSP00000382661.3:p.Thr709Ala
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2119A>G
  hgvsp: ENSP00000174621.6:p.Thr707Ala
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.1945A>G
  hgvsp: ENSP00000311692.5:p.Thr649Ala
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2095A>G
  hgvsp: ENSP00000459042.1:p.Thr699Ala
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2212A>G
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2158A>G
  hgvsp: ENSP00000409627.2:p.Thr720Ala
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2125A>G
  hgvsp: ENSP00000382659.4:p.Thr709Ala
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2125A>G
  hgvsp: ENSP00000459962.1:p.Thr709Ala
  variant of: http://identifiers.org/hgnc/1492
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6680
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17871
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11067
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5496
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4781
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr709Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

17-3475529-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475529
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475529
    reference: chr 17
allele count: 22
allele frequency: 2.172839506172839e-4
allele num: 101250
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2151C>A
  hgvsp: ENST00000425167.2:c.2151C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2118C>A
  hgvsp: ENST00000399756.4:c.2118C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2205C>A
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2112C>A
  hgvsp: ENST00000174621.6:c.2112C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2088C>A
  hgvsp: ENST00000576351.1:c.2088C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2118C>A
  hgvsp: ENST00000572705.1:c.2118C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.1938C>A
  hgvsp: ENST00000310522.5:c.1938C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2118C>A
  hgvsp: ENST00000399759.3:c.2118C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2118C>A
  hgvsp: ENST00000571088.1:c.2118C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10087
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5986
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8624
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7058
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18792
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2201
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5045
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17760
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile706Ile
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum

17-3475529-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3475529
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 3475528
    reference: chr 17
allele count: 1
allele frequency: 9.876543209876543e-6
allele num: 101250
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000262304
  ensembl protein: ENSP00000459962
  ensembl transcript: ENST00000572705
  gene symbol: SHPK
  hgvsc: ENST00000572705.1:c.2117delT
  hgvsp: ENSP00000459962.1:p.Ile706ThrfsTer12
  variant of: http://identifiers.org/hgnc/1492
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382659
  ensembl transcript: ENST00000399756
  gene symbol: TRPV1
  hgvsc: ENST00000399756.4:c.2117delT
  hgvsp: ENSP00000382659.4:p.Ile706ThrfsTer12
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196689
  ensembl transcript: ENST00000574085
  gene symbol: TRPV1
  hgvsc: ENST00000574085.1:n.2204delT
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000459042
  ensembl transcript: ENST00000576351
  gene symbol: TRPV1
  hgvsc: ENST00000576351.1:c.2087delT
  hgvsp: ENSP00000459042.1:p.Ile696ThrfsTer12
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000409627
  ensembl transcript: ENST00000425167
  gene symbol: TRPV1
  hgvsc: ENST00000425167.2:c.2150delT
  hgvsp: ENSP00000409627.2:p.Ile717ThrfsTer12
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000461007
  ensembl transcript: ENST00000571088
  gene symbol: TRPV1
  hgvsc: ENST00000571088.1:c.2117delT
  hgvsp: ENSP00000461007.1:p.Ile706ThrfsTer12
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000382661
  ensembl transcript: ENST00000399759
  gene symbol: TRPV1
  hgvsc: ENST00000399759.3:c.2117delT
  hgvsp: ENSP00000382661.3:p.Ile706ThrfsTer12
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000311692
  ensembl transcript: ENST00000310522
  gene symbol: TRPV1
  hgvsc: ENST00000310522.5:c.1937delT
  hgvsp: ENSP00000311692.5:p.Ile646ThrfsTer12
  variant of: http://identifiers.org/hgnc/12716
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000196689
  ensembl protein: ENSP00000174621
  ensembl transcript: ENST00000174621
  gene symbol: TRPV1
  hgvsc: ENST00000174621.6:c.2111delT
  hgvsp: ENSP00000174621.6:p.Ile704ThrfsTer12
  variant of: http://identifiers.org/hgnc/12716
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10087
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7058
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8624
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5986
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Ile706ThrfsTer12
num of homozygotes: 0
reference allele: GA

GenotypeQuality
all individuals: 1731
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8509
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 122
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1493
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1097
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33074
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1589
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2745
bin: 9.75e1
variant carriers: 35

GenotypeQuality
all individuals: 191
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 126
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6186
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 321
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 5
allele frequency: 6.133464180569186e-4
allele num: 8152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1618
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.278145695364238e-4
allele num: 1208
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.123048094940662e-4
allele num: 3202
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 28
allele frequency: 1.720958819913952e-3
allele num: 16270
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 7.32788e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.324e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.56e-2

FS
type: SiteQuality
SIO_000300: 8.139999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.01e0

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

QD
type: SiteQuality
SIO_000300: 1.344e1

GenotypeQuality
all individuals: 125
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1764
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2714
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 477
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 987
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33824
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1313
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6672
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1746
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.877512636652169e-5
allele num: 17014
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1408
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8232
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.617e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.72e-2

DP
type: SiteQuality
SIO_000300: 7.44239e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

MQRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.79e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.82e-1

QD
type: SiteQuality
SIO_000300: 1.228e1

GenotypeQuality
all individuals: 277
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2727
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 436
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30782
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1352
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14844
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.780867630700779e-4
allele num: 3596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 3.70021528525296e-4
allele num: 29728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 432
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.78e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.88e-1

QD
type: SiteQuality
SIO_000300: 1.114e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.54e-1

DP
type: SiteQuality
SIO_000300: 9.19593e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

GenotypeQuality
all individuals: 917
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21403
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1342
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1224
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25351
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 590
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.281542322610084e-5
allele num: 43830
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11114
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5732
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.78e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.35e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.82e-1

DP
type: SiteQuality
SIO_000300: 1.10343e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.086e1

GenotypeQuality
all individuals: 525
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2187
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29146
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1061
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2718
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 505
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19323
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6164
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.130469981677958e-5
allele num: 46938
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7126
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3628
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.145819e6

VQSLOD
type: SiteQuality
SIO_000300: -1.538e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.82e0

FS
type: SiteQuality
SIO_000300: 1.0671e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.76e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.109e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

QD
type: SiteQuality
SIO_000300: 9.49e0

GenotypeQuality
all individuals: 505
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2718
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1030
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3662
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.100575557702811e-5
allele num: 47606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7254
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.81e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

DP
type: SiteQuality
SIO_000300: 1.155094e6

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e-1

FS
type: SiteQuality
SIO_000300: 1.121e0

QD
type: SiteQuality
SIO_000300: 1.401e1

GenotypeQuality
all individuals: 517
bin: 4.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2724
bin: 9.75e1
variant carriers: 8

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.226692836113837e-4
allele num: 48912
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.448800270361608e-5
allele num: 11836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6972
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.097893432465923e-4
allele num: 6456
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.42e0

DP
type: SiteQuality
SIO_000300: 1.179232e6

QD
type: SiteQuality
SIO_000300: 1.174e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.032e0

MQRankSum
type: SiteQuality
SIO_000300: 1.39e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e-1

FS
type: SiteQuality
SIO_000300: 5.580000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.51e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12112
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.957418180379121e-5
allele num: 50538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7212
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3946
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6746
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.243e0

QD
type: SiteQuality
SIO_000300: 1.12e1

FS
type: SiteQuality
SIO_000300: 7.923e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

MQRankSum
type: SiteQuality
SIO_000300: 2.64e-1

DP
type: SiteQuality
SIO_000300: 1.200611e6

GenotypeQuality
all individuals: 2337
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 143
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.473622163277336e-4
allele num: 6786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7978
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12138
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 672
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50940
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4004
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7272
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

FS
type: SiteQuality
SIO_000300: 1.913e0

VQSLOD
type: SiteQuality
SIO_000300: -6.866e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

DP
type: SiteQuality
SIO_000300: 1.206947e6

MQRankSum
type: SiteQuality
SIO_000300: -2.34e-1

QD
type: SiteQuality
SIO_000300: 6.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.35e-1

GenotypeQuality
all individuals: 2385
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 145
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GenotypeQuality
all individuals: 852
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.699784017278618e-4
allele num: 7408
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52110
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4132
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6956
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8214
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.67e0

QD
type: SiteQuality
SIO_000300: 1.116e1

VQSLOD
type: SiteQuality
SIO_000300: 9.61e-1

FS
type: SiteQuality
SIO_000300: 3.945e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 1.224033e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.63e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.950389569088885e-5
allele num: 12578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7174
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4326
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.547e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.26e-1

QD
type: SiteQuality
SIO_000300: 9.18e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.5e-1

FS
type: SiteQuality
SIO_000300: 3.031e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.2e-2

DP
type: SiteQuality
SIO_000300: 1.248627e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2719
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 702
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12782
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.82822041025266e-5
allele num: 54698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8674
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7702
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4458
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.36e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.49e0

DP
type: SiteQuality
SIO_000300: 1.26117e6

FS
type: SiteQuality
SIO_000300: 5.621e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQRankSum
type: SiteQuality
SIO_000300: 4.19e-1

QD
type: SiteQuality
SIO_000300: 5.6e0

GenotypeQuality
all individuals: 14769
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GenotypeQuality
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GenotypeQuality
all individuals: 138
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GenotypeQuality
all individuals: 446
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GenotypeQuality
all individuals: 235
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GenotypeQuality
all individuals: 33
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GenotypeQuality
all individuals: 197
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GenotypeQuality
all individuals: 158
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GenotypeQuality
all individuals: 911
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GenotypeQuality
all individuals: 73
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GenotypeQuality
all individuals: 2483
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 861
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 698
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7680
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.817385866166354e-5
allele num: 12792
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.357e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.346e0

DP
type: SiteQuality
SIO_000300: 1.253337e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.94e0

MQRankSum
type: SiteQuality
SIO_000300: 7.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

MQ
type: SiteQuality
SIO_000300: 5.947e1

VQSLOD
type: SiteQuality
SIO_000300: -1.516e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.318e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 1

GenotypeQuality
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bin: 9.75e1
variant carriers: 96

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7638
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.499766682221185e-4
allele num: 8572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4350
num of homozygotes: 0

South Asian
type: Population
allele count: 98
allele frequency: 7.674236491777604e-3
allele num: 12770
num of homozygotes: 1

Other
type: Population
allele count: 1
allele frequency: 1.449275362318841e-3
allele num: 690
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7196
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53998
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.154e0

FS
type: SiteQuality
SIO_000300: 1.756e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.238484e6

QD
type: SiteQuality
SIO_000300: 1.081e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 684
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7154
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4272
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.321702352630188e-4
allele num: 7566
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.44e-1

QD
type: SiteQuality
SIO_000300: 6.39e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.9e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.578e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.42e-1

DP
type: SiteQuality
SIO_000300: 1.220903e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

FS
type: SiteQuality
SIO_000300: 4.752e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.44e-1

GenotypeQuality
all individuals: 480
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 900
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.322051824431518e-4
allele num: 7564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.869158878504673e-5
allele num: 53500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4272
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.575299306868305e-4
allele num: 12696
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.181753722524226e-4
allele num: 8462
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.86e0

DP
type: SiteQuality
SIO_000300: 1.221166e6

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.21e-1

FS
type: SiteQuality
SIO_000300: 2.098e0

QD
type: SiteQuality
SIO_000300: 1.276e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.61e-1

GenotypeQuality
all individuals: 140
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 375
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GenotypeQuality
all individuals: 26
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 711
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GenotypeQuality
all individuals: 290
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7306
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7926
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 676
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4066
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.94650990773543e-5
allele num: 51374
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -5.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.28e-1

FS
type: SiteQuality
SIO_000300: 3.565e0

VQSLOD
type: SiteQuality
SIO_000300: 6.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.58e-1

DP
type: SiteQuality
SIO_000300: 1.156406e6

QD
type: SiteQuality
SIO_000300: 1.041e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6766
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 676
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4030
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.957483459264769e-5
allele num: 51086
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7276
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7858
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12408
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.82e-1

MQ
type: SiteQuality
SIO_000300: 5.886e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.150192e6

MQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.12e0

QD
type: SiteQuality
SIO_000300: 3.063e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.875e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-1

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.494733265375468e-5
allele num: 11772
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6022
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45714
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.803e0

DP
type: SiteQuality
SIO_000300: 1.007252e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.9e-3

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.392e0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
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SIO_000300: -8.25e-2

QD
type: SiteQuality
SIO_000300: 1.663e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.26e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5992
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.582700662658534e-5
allele num: 45574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6620
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South Asian
type: Population
allele count: 1
allele frequency: 8.510638297872341e-5
allele num: 11750
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3606
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.221e1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.006166e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.72e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -8.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.75e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1231

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 13576
bin: 6.25e1
variant carriers: 12

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 10

GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
all individuals: 275
bin: 8.25e1
variant carriers: 16

GenotypeQuality
all individuals: 205
bin: 9.25e1
variant carriers: 18

GenotypeQuality
all individuals: 372
bin: 7.75e1
variant carriers: 9

GenotypeQuality
all individuals: 143
bin: 8.75e1
variant carriers: 18

European (Finnish)
type: Population
allele count: 215
allele frequency: 5.922865013774105e-2
allele num: 3630
num of homozygotes: 3

African
type: Population
allele count: 18
allele frequency: 2.759043531575721e-3
allele num: 6524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 928
allele frequency: 2.058014725450191e-2
allele num: 45092
num of homozygotes: 5

East Asian
type: Population
allele count: 1
allele frequency: 1.682935038707506e-4
allele num: 5942
num of homozygotes: 0

Latino
type: Population
allele count: 36
allele frequency: 5.514705882352942e-3
allele num: 6528
num of homozygotes: 2

Other
type: Population
allele count: 18
allele frequency: 2.931596091205212e-2
allele num: 614
num of homozygotes: 0

South Asian
type: Population
allele count: 76
allele frequency: 6.509078451524495e-3
allele num: 11676
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

DP
type: SiteQuality
SIO_000300: 1.007654e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.413e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-2

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 155
bin: 4.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 5424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2618
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4762
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.755580049600441e-5
allele num: 36290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 504
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.52e-2

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.716e1

QD
type: SiteQuality
SIO_000300: 6.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.5e-1

DP
type: SiteQuality
SIO_000300: 8.34279e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5414
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.491268033409264e-5
allele num: 10536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 502
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.38e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.188e0

MQRankSum
type: SiteQuality
SIO_000300: 1.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.88e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.221e1

DP
type: SiteQuality
SIO_000300: 8.32733e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 347
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4082
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.981870229007633e-5
allele num: 33536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2332
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5094
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4218
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 478
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.811616954474098e-5
allele num: 10192
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.308e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

DP
type: SiteQuality
SIO_000300: 8.03814e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.435e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.85e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.44e0

GenotypeQuality
all individuals: 125
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.003210272873194e-4
allele num: 9968
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 31924
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 4.084967320261438e-4
allele num: 4896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2206
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3788
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 466
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.374e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.061e-1

FS
type: SiteQuality
SIO_000300: 1.182e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 7.88292e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3310
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.439262622093823e-5
allele num: 29076
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 432
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1896
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9688
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
type: SiteQuality
SIO_000300: 3.18e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.28e-1

FS
type: SiteQuality
SIO_000300: 7.576e0

QD
type: SiteQuality
SIO_000300: 1.353e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.908e0

DP
type: SiteQuality
SIO_000300: 7.57058e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.25e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2946
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.601008282319049e-5
allele num: 27770
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1752
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 416
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.381e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.43e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.71e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.44954e5

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3944
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2142
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9110
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 23426
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1388
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 372
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
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ClippingRankSum
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 511
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1864
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1372
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 18806
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1040
num of homozygotes: 0

African
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allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 9.369999999999999e0

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.32e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.433010974682169e-5
allele num: 18406
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3294
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 996
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 310
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.78e-1

FS
type: SiteQuality
SIO_000300: 1.413e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.76e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.29e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.46e-2

DP
type: SiteQuality
SIO_000300: 6.72365e5

QD
type: SiteQuality
SIO_000300: 1.466e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.79e0

GenotypeQuality
all individuals: 2817
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 5.25e1
variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
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variant carriers: 0

GenotypeQuality
all individuals: 2738
bin: 9.75e1
variant carriers: 6

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 974
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1768
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.1101243339254e-4
allele num: 18016
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 302
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.285e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.01e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

DP
type: SiteQuality
SIO_000300: 6.72149e5

MQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

GenotypeQuality
all individuals: 287
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2738
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 338
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 974
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.550621669626998e-5
allele num: 18016
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 302
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1768
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.01e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 6.72149e5

QD
type: SiteQuality
SIO_000300: 1.285e1

GenotypeQuality
all individuals: 124
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 263
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variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 980
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.021148036253776e-4
allele num: 3310
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1274
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1812
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.332089552238806e-4
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18266
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

DP
type: SiteQuality
SIO_000300: 6.72339e5

QD
type: SiteQuality
SIO_000300: 1.485e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.25e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.025e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.35e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

GenotypeQuality
all individuals: 2703
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 829
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variant carriers: 0

GenotypeQuality
all individuals: 3202
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.962779156327543e-4
allele num: 8060
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6024
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61558
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.73e0

VQSLOD
type: SiteQuality
SIO_000300: 1.584e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.574e-1

QD
type: SiteQuality
SIO_000300: 3.484e1

FS
type: SiteQuality
SIO_000300: 3.107e0

DP
type: SiteQuality
SIO_000300: 1.241113e6

GenotypeQuality
all individuals: 3323
bin: 4.25e1
variant carriers: 3295

GenotypeQuality
all individuals: 183
bin: 2.5e0
variant carriers: 40

GenotypeQuality
all individuals: 3202
bin: 5.75e1
variant carriers: 3182

GenotypeQuality
all individuals: 266
bin: 1.25e1
variant carriers: 258

GenotypeQuality
all individuals: 2031
bin: 2.25e1
variant carriers: 2003

GenotypeQuality
all individuals: 4100
bin: 3.25e1
variant carriers: 4066

GenotypeQuality
all individuals: 1147
bin: 9.25e1
variant carriers: 1140

GenotypeQuality
all individuals: 2703
bin: 7.75e1
variant carriers: 2670

GenotypeQuality
all individuals: 829
bin: 8.75e1
variant carriers: 822

GenotypeQuality
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bin: 6.25e1
variant carriers: 5169

GenotypeQuality
all individuals: 6552
bin: 4.75e1
variant carriers: 6511

GenotypeQuality
all individuals: 7546
bin: 9.75e1
variant carriers: 7502

GenotypeQuality
all individuals: 1768
bin: 7.25e1
variant carriers: 1744

GenotypeQuality
all individuals: 6600
bin: 5.25e1
variant carriers: 6554

East Asian
type: Population
allele count: 8056
allele frequency: 9.995037220843672e-1
allele num: 8060
num of homozygotes: 4026

Other
type: Population
allele count: 782
allele frequency: 9.750623441396509e-1
allele num: 802
num of homozygotes: 381

Latino
type: Population
allele count: 10268
allele frequency: 9.801450935471554e-1
allele num: 10476
num of homozygotes: 5031

European (Finnish)
type: Population
allele count: 6020
allele frequency: 9.9933598937583e-1
allele num: 6024
num of homozygotes: 3008

South Asian
type: Population
allele count: 14639
allele frequency: 9.991127491127492e-1
allele num: 14652
num of homozygotes: 7313

African
type: Population
allele count: 4973
allele frequency: 5.625565610859729e-1
allele num: 8840
num of homozygotes: 1371

European (Non-Finnish)
type: Population
allele count: 61476
allele frequency: 9.986679229344683e-1
allele num: 61558
num of homozygotes: 30697

BaseQRankSum
type: SiteQuality
SIO_000300: 1.73e0

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-2

QD
type: SiteQuality
SIO_000300: 3.484e1

FS
type: SiteQuality
SIO_000300: 3.107e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.574e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.584e1

DP
type: SiteQuality
SIO_000300: 1.241113e6

GenotypeQuality
all individuals: 5310
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3267
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GenotypeQuality
all individuals: 332
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61186
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5914
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.4906600249066e-4
allele num: 8030
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10464
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9004
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.167e0

VQSLOD
type: SiteQuality
SIO_000300: -1.174e0

FS
type: SiteQuality
SIO_000300: 1.0344e1

QD
type: SiteQuality
SIO_000300: 9.68e0

DP
type: SiteQuality
SIO_000300: 1.249039e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

GenotypeQuality
all individuals: 84
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variant carriers: 1

GenotypeQuality
all individuals: 5225
bin: 3.75e1
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GenotypeQuality
all individuals: 1398
bin: 8.25e1
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GenotypeQuality
all individuals: 212
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GenotypeQuality
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GenotypeQuality
all individuals: 4321
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GenotypeQuality
all individuals: 810
bin: 9.25e1
variant carriers: 16

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2677
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
all individuals: 5771
bin: 9.75e1
variant carriers: 1591

GenotypeQuality
all individuals: 18389
bin: 6.25e1
variant carriers: 7

GenotypeQuality
all individuals: 1619
bin: 7.25e1
variant carriers: 11

East Asian
type: Population
allele count: 2
allele frequency: 2.488181139586962e-4
allele num: 8038
num of homozygotes: 0

Latino
type: Population
allele count: 45
allele frequency: 4.280821917808219e-3
allele num: 10512
num of homozygotes: 3

Other
type: Population
allele count: 21
allele frequency: 2.60545905707196e-2
allele num: 806
num of homozygotes: 0

African
type: Population
allele count: 22
allele frequency: 2.439024390243902e-3
allele num: 9020
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 233
allele frequency: 3.909395973154362e-2
allele num: 5960
num of homozygotes: 3

South Asian
type: Population
allele count: 161
allele frequency: 1.108204845814978e-2
allele num: 14528
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 1195
allele frequency: 1.94701511991658e-2
allele num: 61376
num of homozygotes: 13

VQSLOD
type: SiteQuality
SIO_000300: 5.65e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.934e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.309e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-2

DP
type: SiteQuality
SIO_000300: 1.293125e6

GenotypeQuality
all individuals: 186
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 614
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4391
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1788
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variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 1.25e1
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GenotypeQuality
all individuals: 21967
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5990
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8084
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10548
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.104972375690608e-4
allele num: 9050
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61580
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.251e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

FS
type: SiteQuality
SIO_000300: 6.029e0

QD
type: SiteQuality
SIO_000300: 5.98e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.247e0

DP
type: SiteQuality
SIO_000300: 1.329683e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.889999999999999e-1

GenotypeQuality
all individuals: 2317
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5130
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 1654
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4996
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2371
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4401
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 662
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9066
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.231223836493475e-4
allele num: 8122
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6006
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -5.229e-1

DP
type: SiteQuality
SIO_000300: 1.353207e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.025e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.05e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

QD
type: SiteQuality
SIO_000300: 1.677e1

GenotypeQuality
all individuals: 433
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2677
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1830
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variant carriers: 0

GenotypeQuality
all individuals: 953
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GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6082
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14778
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9134
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.601486179174274e-5
allele num: 62442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10682
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.080000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.9e-1

DP
type: SiteQuality
SIO_000300: 1.405216e6

FS
type: SiteQuality
SIO_000300: 2.281e0

QD
type: SiteQuality
SIO_000300: 1.035e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.8e-2

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 25

GenotypeQuality
all individuals: 4303
bin: 8.25e1
variant carriers: 4289

GenotypeQuality
all individuals: 4106
bin: 7.75e1
variant carriers: 4077

GenotypeQuality
all individuals: 203
bin: 2.75e1
variant carriers: 194

GenotypeQuality
all individuals: 246
bin: 2.25e1
variant carriers: 217

GenotypeQuality
all individuals: 90
bin: 1.75e1
variant carriers: 89

GenotypeQuality
all individuals: 2287
bin: 5.25e1
variant carriers: 2281

GenotypeQuality
all individuals: 1001
bin: 3.75e1
variant carriers: 990

GenotypeQuality
all individuals: 42
bin: 2.5e0
variant carriers: 10

GenotypeQuality
all individuals: 3935
bin: 9.25e1
variant carriers: 3929

GenotypeQuality
all individuals: 1757
bin: 4.75e1
variant carriers: 1752

GenotypeQuality
all individuals: 1987
bin: 7.25e1
variant carriers: 1970

GenotypeQuality
all individuals: 699
bin: 4.25e1
variant carriers: 696

GenotypeQuality
all individuals: 3646
bin: 6.25e1
variant carriers: 3108

African
type: Population
allele count: 5597
allele frequency: 5.825353871773522e-1
allele num: 9608
num of homozygotes: 1602

European (Finnish)
type: Population
allele count: 6570
allele frequency: 9.993915424399148e-1
allele num: 6574
num of homozygotes: 3283

Latino
type: Population
allele count: 11222
allele frequency: 9.807725922041601e-1
allele num: 11442
num of homozygotes: 5502

East Asian
type: Population
allele count: 8598
allele frequency: 1.0e0
allele num: 8598
num of homozygotes: 4299

South Asian
type: Population
allele count: 16217
allele frequency: 9.991990141712878e-1
allele num: 16230
num of homozygotes: 8102

European (Non-Finnish)
type: Population
allele count: 66241
allele frequency: 9.986883367506936e-1
allele num: 66328
num of homozygotes: 33077

Other
type: Population
allele count: 862
allele frequency: 9.773242630385488e-1
allele num: 882
num of homozygotes: 421

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.5e-1

DP
type: SiteQuality
SIO_000300: 2.079856e6

FS
type: SiteQuality
SIO_000300: 2.748e0

QD
type: SiteQuality
SIO_000300: 3.316e1

MQRankSum
type: SiteQuality
SIO_000300: 1.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.514e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 574
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2313
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variant carriers: 0

GenotypeQuality
all individuals: 612
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variant carriers: 0

GenotypeQuality
all individuals: 953
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variant carriers: 0

GenotypeQuality
all individuals: 4545
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variant carriers: 1

GenotypeQuality
all individuals: 33395
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variant carriers: 0

GenotypeQuality
all individuals: 100
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GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
all individuals: 411
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GenotypeQuality
all individuals: 1489
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variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167406023815083e-4
allele num: 8566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15874
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.688661e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.659e0

VQSLOD
type: SiteQuality
SIO_000300: -2.631e0

QD
type: SiteQuality
SIO_000300: 3.85e0

MQRankSum
type: SiteQuality
SIO_000300: -4.24e-1

MQ
type: SiteQuality
SIO_000300: 5.923e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.16e-1

GenotypeQuality
all individuals: 656
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2510
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 34274
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variant carriers: 0

GenotypeQuality
all individuals: 246
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variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 743
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variant carriers: 0

GenotypeQuality
all individuals: 2301
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GenotypeQuality
all individuals: 602
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variant carriers: 0

GenotypeQuality
all individuals: 1009
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variant carriers: 0

GenotypeQuality
all individuals: 2061
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variant carriers: 0

GenotypeQuality
all individuals: 572
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variant carriers: 0

GenotypeQuality
all individuals: 57
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variant carriers: 0

GenotypeQuality
all individuals: 1475
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variant carriers: 0

GenotypeQuality
all individuals: 4540
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 584
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 898
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variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11240
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.15473441108545e-3
allele num: 866
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.618699335649418e-5
allele num: 65628
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.53e-1

DP
type: SiteQuality
SIO_000300: 1.690906e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 8.76e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.82e-1

GenotypeQuality
all individuals: 2234
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35473
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 7.5e0
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GenotypeQuality
all individuals: 303
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 496
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variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2432
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2243
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4537
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 6919
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.829993595022417e-4
allele num: 65574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15844
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.16e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.32e-1

QD
type: SiteQuality
SIO_000300: 1.206e1

DP
type: SiteQuality
SIO_000300: 1.695455e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e0

FS
type: SiteQuality
SIO_000300: 3.258e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
all individuals: 592
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4536
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 561
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GenotypeQuality
all individuals: 27
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GenotypeQuality
all individuals: 6861
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variant carriers: 0

GenotypeQuality
all individuals: 22
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GenotypeQuality
all individuals: 665
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variant carriers: 0

GenotypeQuality
all individuals: 418
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variant carriers: 0

GenotypeQuality
all individuals: 686
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variant carriers: 0

GenotypeQuality
all individuals: 530
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GenotypeQuality
all individuals: 1393
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variant carriers: 0

GenotypeQuality
all individuals: 41
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GenotypeQuality
all individuals: 2392
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variant carriers: 0

GenotypeQuality
all individuals: 554
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variant carriers: 0

GenotypeQuality
all individuals: 2215
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15824
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.051745898190997e-4
allele num: 9508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.136947827945172e-4
allele num: 65514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11226
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.697199e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

FS
type: SiteQuality
SIO_000300: 5.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.97e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.17e-1

QD
type: SiteQuality
SIO_000300: 1.153e1

GenotypeQuality
all individuals: 4514
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 520
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variant carriers: 0

GenotypeQuality
all individuals: 391
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GenotypeQuality
all individuals: 2199
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variant carriers: 0

GenotypeQuality
all individuals: 526
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variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36260
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GenotypeQuality
all individuals: 789
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variant carriers: 0

GenotypeQuality
all individuals: 614
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variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2418
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2347
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 586
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variant carriers: 0

GenotypeQuality
all individuals: 1363
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.374633431085044e-4
allele num: 65472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6432
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15810
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -7.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.73e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
type: SiteQuality
SIO_000300: 8.387e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.79e-1

QD
type: SiteQuality
SIO_000300: 8.23e0

DP
type: SiteQuality
SIO_000300: 1.697774e6

GenotypeQuality
all individuals: 271
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.054740957966764e-5
allele num: 65472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15810
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.57e-1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -7.3e-2

FS
type: SiteQuality
SIO_000300: 8.387e0

ReadPosRankSum
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SIO_000300: 5.79e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

BaseQRankSum
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SIO_000300: -6.73e-1

DP
type: SiteQuality
SIO_000300: 1.697774e6

QD
type: SiteQuality
SIO_000300: 8.23e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9480
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15796
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6428
num of homozygotes: 0

Latino
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allele count: 22
allele frequency: 1.964987495534119e-3
allele num: 11196
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.157407407407407e-3
allele num: 864
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.056421541659025e-5
allele num: 65436
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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InbreedingCoeff
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FS
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QD
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.698286e6

BaseQRankSum
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SIO_000300: 5.7e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9480
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6428
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15796
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.338634237605239e-4
allele num: 8552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65436
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.24e-1

InbreedingCoeff
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SIO_000300: 2.0e-3

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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MQRankSum
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QD
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DP
type: SiteQuality
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VQSLOD
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MQ
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ClippingRankSum
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SIO_000300: -2.72e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.952551477170994e-5
allele num: 11170
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65424
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6414
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.697179e6

QD
type: SiteQuality
SIO_000300: 1.774e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.82e-1

MQ
type: SiteQuality
SIO_000300: 5.923e1

BaseQRankSum
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SIO_000300: -1.746e0

VQSLOD
type: SiteQuality
SIO_000300: -7.557e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.79e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.059694642474681e-5
allele num: 65366
num of homozygotes: 0

Other
type: Population
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allele num: 858
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 35
allele frequency: 5.467041549515776e-3
allele num: 6402
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.05e-1

QD
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MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.092e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65346
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European (Finnish)
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allele frequency: 0.0e0
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Other
type: Population
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Latino
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allele frequency: 1.794365691727974e-4
allele num: 11146
num of homozygotes: 0

QD
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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ReadPosRankSum
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FS
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DP
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

African
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East Asian
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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FS
type: SiteQuality
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BaseQRankSum
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MQRankSum
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VQSLOD
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ReadPosRankSum
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DP
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MQ
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InbreedingCoeff
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 15576
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
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allele num: 64982
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East Asian
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European (Finnish)
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Other
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
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FS
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QD
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VQSLOD
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MQ
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MQRankSum
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DP
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 1203
bin: 8.25e1
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GenotypeQuality
all individuals: 4490
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 4285
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 901
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546838262591263e-5
allele num: 64648
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10928
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.485e0

QD
type: SiteQuality
SIO_000300: 2.934e1

MQRankSum
type: SiteQuality
SIO_000300: -9.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -6.425999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.665169e6

GenotypeQuality
all individuals: 186
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8610
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1265
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1644
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8228
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5946
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.680542110358181e-5
allele num: 10330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.799385678633135e-5
allele num: 62508
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.102535832414554e-4
allele num: 9070
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.704210244033253e-5
allele num: 14916
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

DP
type: SiteQuality
SIO_000300: 1.537937e6

FS
type: SiteQuality
SIO_000300: 2.205e0

MQRankSum
type: SiteQuality
SIO_000300: 7.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.72e-1

QD
type: SiteQuality
SIO_000300: 1.187e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.27e-1

GenotypeQuality
all individuals: 1696
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8904
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variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1303
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1300
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 695
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.103265666372463e-4
allele num: 9064
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5914
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8204
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62294
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14884
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.217e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e-1

DP
type: SiteQuality
SIO_000300: 1.529082e6

QD
type: SiteQuality
SIO_000300: 1.135e1

MQRankSum
type: SiteQuality
SIO_000300: -1.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQ
type: SiteQuality
SIO_000300: 5.94e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

GenotypeQuality
all individuals: 518
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
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variant carriers: 0

GenotypeQuality
all individuals: 1300
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9062
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.605858170606372e-5
allele num: 62272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8204
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

VQSLOD
type: SiteQuality
SIO_000300: 5.6e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.37e-1

DP
type: SiteQuality
SIO_000300: 1.520672e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.203e0

QD
type: SiteQuality
SIO_000300: 1.431e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 4231
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1354
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1790
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variant carriers: 0

GenotypeQuality
all individuals: 1598
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variant carriers: 0

GenotypeQuality
all individuals: 646
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variant carriers: 0

GenotypeQuality
all individuals: 33
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GenotypeQuality
all individuals: 9517
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 831
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2837
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1328
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8182
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9020
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14810
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.609321188322765e-5
allele num: 62138
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.683e1

VQSLOD
type: SiteQuality
SIO_000300: -9.530999999999999e-1

FS
type: SiteQuality
SIO_000300: 9.978e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.56e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.11e-1

DP
type: SiteQuality
SIO_000300: 1.507968e6

GenotypeQuality
all individuals: 9906
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1539
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4081
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1567
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
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GenotypeQuality
all individuals: 4477
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 318
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variant carriers: 0

GenotypeQuality
all individuals: 1439
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2491
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1292
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 737
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variant carriers: 0

GenotypeQuality
all individuals: 24310
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5828
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61862
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8976
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14776
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.867771857114664e-5
allele num: 10134
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

DP
type: SiteQuality
SIO_000300: 1.494076e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

FS
type: SiteQuality
SIO_000300: 1.942e0

VQSLOD
type: SiteQuality
SIO_000300: 8.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 1.184e1

MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 137
bin: 1.25e1
variant carriers: 10

GenotypeQuality
all individuals: 1724
bin: 3.75e1
variant carriers: 16

GenotypeQuality
all individuals: 246
bin: 1.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2987
bin: 3.25e1
variant carriers: 13

GenotypeQuality
all individuals: 1056
bin: 7.25e1
variant carriers: 24

GenotypeQuality
all individuals: 10285
bin: 2.25e1
variant carriers: 12

GenotypeQuality
all individuals: 796
bin: 8.25e1
variant carriers: 22

GenotypeQuality
all individuals: 354
bin: 7.5e0
variant carriers: 7

GenotypeQuality
all individuals: 1414
bin: 5.25e1
variant carriers: 12

GenotypeQuality
all individuals: 8760
bin: 9.75e1
variant carriers: 5417

GenotypeQuality
all individuals: 612
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variant carriers: 26

GenotypeQuality
all individuals: 724
bin: 4.25e1
variant carriers: 9

GenotypeQuality
all individuals: 1040
bin: 5.75e1
variant carriers: 18

GenotypeQuality
all individuals: 1142
bin: 4.75e1
variant carriers: 13

GenotypeQuality
all individuals: 425
bin: 8.75e1
variant carriers: 28

GenotypeQuality
all individuals: 3398
bin: 6.75e1
variant carriers: 17

Other
type: Population
allele count: 36
allele frequency: 4.568527918781726e-2
allele num: 788
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2911
allele frequency: 4.745679817411151e-2
allele num: 61340
num of homozygotes: 59

Latino
type: Population
allele count: 229
allele frequency: 2.282695374800638e-2
allele num: 10032
num of homozygotes: 2

African
type: Population
allele count: 1447
allele frequency: 1.624747361329441e-1
allele num: 8906
num of homozygotes: 97

European (Finnish)
type: Population
allele count: 128
allele frequency: 2.224539450816823e-2
allele num: 5754
num of homozygotes: 1

South Asian
type: Population
allele count: 740
allele frequency: 5.034013605442177e-2
allele num: 14700
num of homozygotes: 21

East Asian
type: Population
allele count: 305
allele frequency: 3.782242063492063e-2
allele num: 8064
num of homozygotes: 4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.76e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.02e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.32e0

DP
type: SiteQuality
SIO_000300: 1.513549e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.661e0

QD
type: SiteQuality
SIO_000300: 1.386e1

GenotypeQuality
all individuals: 272
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2073
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 417
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GenotypeQuality
all individuals: 678
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GenotypeQuality
all individuals: 431
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GenotypeQuality
all individuals: 1234
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GenotypeQuality
all individuals: 1170
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GenotypeQuality
all individuals: 849
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GenotypeQuality
all individuals: 3169
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variant carriers: 0

GenotypeQuality
all individuals: 12625
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variant carriers: 0

GenotypeQuality
all individuals: 22707
bin: 6.25e1
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GenotypeQuality
all individuals: 3465
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variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1255
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3755
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60364
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7920
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.171234481143125e-4
allele num: 8538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.75e0

VQSLOD
type: SiteQuality
SIO_000300: 3.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.335e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.82e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.389347e6

GenotypeQuality
all individuals: 1169
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3747
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1451
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1732
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2983
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2441
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14176
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.285347043701799e-4
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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DP
type: SiteQuality
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VQSLOD
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FS
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7752
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.690960127160202e-5
allele num: 59138
num of homozygotes: 0

MQ
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SIO_000300: 5.923e1

MQRankSum
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ClippingRankSum
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BaseQRankSum
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DP
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QD
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InbreedingCoeff
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VQSLOD
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SIO_000300: -1.314e-1

FS
type: SiteQuality
SIO_000300: 1.607e0

ReadPosRankSum
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SIO_000300: -4.2e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 5462
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 8302
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.692276450280918e-5
allele num: 59092
num of homozygotes: 0

Other
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MQRankSum
type: SiteQuality
SIO_000300: -3.37e-1

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
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FS
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BaseQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9312
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 7.165376898824878e-5
allele num: 13956
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.425126729688999e-5
allele num: 58392
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5364
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East Asian
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 6.46e-1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.61e-1

QD
type: SiteQuality
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BaseQRankSum
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SIO_000300: -3.39e-1

MQ
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SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

InbreedingCoeff
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SIO_000300: -3.6e-3

FS
type: SiteQuality
SIO_000300: 2.004e0

DP
type: SiteQuality
SIO_000300: 1.272183e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5258
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 9154
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East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.460686600221484e-5
allele num: 57792
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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InbreedingCoeff
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VQSLOD
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MQRankSum
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MQ
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DP
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BaseQRankSum
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QD
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
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East Asian
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African
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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allele num: 57828
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QD
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ClippingRankSum
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MQ
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VQSLOD
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BaseQRankSum
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FS
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InbreedingCoeff
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MQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 22

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Other
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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East Asian
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South Asian
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allele frequency: 1.608892789235045e-3
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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ClippingRankSum
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MQ
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DP
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FS
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BaseQRankSum
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