17-76113692-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113692
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113692
    reference: chr 17
allele count: 1
allele frequency: 3.026451183342413e-5
allele num: 33042
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.792G>A
  hgvsp: ENST00000591436.1:c.792G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2635G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2055G>A
  hgvsp: ENST00000392467.3:c.2055G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.792G>A
  hgvsp: ENST00000322933.4:c.792G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2055G>A
  hgvsp: ENST00000590602.1:c.2055G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.405G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2055G>A
  hgvsp: ENST00000322914.3:c.2055G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-3990G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-3987G>A
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13933
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8606
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28840
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13788
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1254
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4483
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27257
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg685Arg
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD

17-76113693-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113693
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113693
    reference: chr 17
allele count: 1
allele frequency: 3.040068097525384e-5
allele num: 32894
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-3988G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2054G>A
  hgvsp: ENSP00000465261.1:p.Arg685Gln
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2054G>A
  hgvsp: ENSP00000313408.2:p.Arg685Gln
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-3991G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2054G>A
  hgvsp: ENSP00000376260.2:p.Arg685Gln
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.791G>A
  hgvsp: ENSP00000464853.1:p.Arg264Gln
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.404G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.791G>A
  hgvsp: ENSP00000313479.4:p.Arg264Gln
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2634G>A
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13910
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28909
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8568
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1711
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3948
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 970
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg685Gln
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ

17-76113700-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113700
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113700
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 31834
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-3995C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.784C>T
  hgvsp: ENSP00000313479.4:p.Pro262Ser
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-3998C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2047C>T
  hgvsp: ENSP00000465261.1:p.Pro683Ser
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2047C>T
  hgvsp: ENSP00000376260.2:p.Pro683Ser
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2627C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.784C>T
  hgvsp: ENSP00000464853.1:p.Pro262Ser
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2047C>T
  hgvsp: ENSP00000313408.2:p.Pro683Ser
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.397C>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28732
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14782
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8043
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2362
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1641
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro683Ser
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

17-76113704-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113704
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113704
    reference: chr 17
allele count: 7
allele frequency: 2.30066390586998e-4
allele num: 30426
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.780C>T
  hgvsp: ENST00000591436.1:c.780C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2043C>T
  hgvsp: ENST00000392467.3:c.2043C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2043C>T
  hgvsp: ENST00000590602.1:c.2043C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4002C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2623C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2043C>T
  hgvsp: ENST00000322914.3:c.2043C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.780C>T
  hgvsp: ENST00000322933.4:c.780C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.393C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-3999C>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28273
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15607
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7728
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1526
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15408
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3262
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Cys681Cys
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

17-76113711-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113711
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113711
    reference: chr 17
allele count: 1
allele frequency: 3.427709604442312e-5
allele num: 29174
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2036G>C
  hgvsp: ENSP00000313408.2:p.Ser679Thr
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4009G>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2036G>C
  hgvsp: ENSP00000376260.2:p.Ser679Thr
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.773G>C
  hgvsp: ENSP00000313479.4:p.Ser258Thr
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2036G>C
  hgvsp: ENSP00000465261.1:p.Ser679Thr
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2616G>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.773G>C
  hgvsp: ENSP00000464853.1:p.Ser258Thr
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4006G>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.386G>C
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7012
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28028
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16701
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16459
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26953
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser679Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD

17-76113714-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113714
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113714
    reference: chr 17
allele count: 1
allele frequency: 3.509510774198076e-5
allele num: 28494
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.770C>T
  hgvsp: ENSP00000313479.4:p.Ser257Leu
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.770C>T
  hgvsp: ENSP00000464853.1:p.Ser257Leu
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2033C>T
  hgvsp: ENSP00000465261.1:p.Ser678Leu
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2613C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4009C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4012C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2033C>T
  hgvsp: ENSP00000313408.2:p.Ser678Leu
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.383C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2033C>T
  hgvsp: ENSP00000376260.2:p.Ser678Leu
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27885
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6784
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16852
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1012
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26647
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser678Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ

17-76113716-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113716
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113716
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 28408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4011C>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2611C>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2031C>A
  hgvsp: ENST00000322914.3:c.2031C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.768C>A
  hgvsp: ENST00000591436.1:c.768C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2031C>A
  hgvsp: ENST00000590602.1:c.2031C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4014C>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2031C>A
  hgvsp: ENST00000392467.3:c.2031C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.768C>A
  hgvsp: ENST00000322933.4:c.768C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.381C>A
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6665
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17293
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27870
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3275
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27200
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2352
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro677Pro
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

17-76113720-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113720
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113720
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 27748
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.764A>C
  hgvsp: ENSP00000464853.1:p.Lys255Thr
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2027A>C
  hgvsp: ENSP00000465261.1:p.Lys676Thr
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2607A>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2027A>C
  hgvsp: ENSP00000313408.2:p.Lys676Thr
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2027A>C
  hgvsp: ENSP00000376260.2:p.Lys676Thr
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4015A>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.377A>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.764A>C
  hgvsp: ENSP00000313479.4:p.Lys255Thr
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4018A>C
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27223
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25834
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3173
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2937
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Lys676Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD

17-76113726-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113726
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113726
    reference: chr 17
allele count: 2
allele frequency: 7.416196974191635e-5
allele num: 26968
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2022-1G>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.759-1G>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4021G>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2022-1G>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.372-1G>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2602-1G>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.759-1G>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2022-1G>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4024G>C
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19450
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26209
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19200
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24581
  bin: 2.25e1
  variant carriers: 0
hgvs: c.2022-1G>C
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-76113730-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113730
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113730
    reference: chr 17
allele count: 1
allele frequency: 3.825262030449086e-5
allele num: 26142
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.372-5C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4025C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2022-5C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.759-5C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2022-5C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2602-5C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.759-5C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2022-5C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4028C>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20648
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5860
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22130
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3503
  bin: 1.75e1
  variant carriers: 0
hgvs: c.2022-5C>T
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

17-76113731-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113731
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113731
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 25960
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2022-6C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2022-6C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.759-6C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2022-6C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4029C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.372-6C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2602-6C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.759-6C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4026C>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20820
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25138
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5791
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1230
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3171
  bin: 1.25e1
  variant carriers: 0
hgvs: c.2022-6C>T
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

17-76113738-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113738
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113738
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 24576
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2022-13G>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.759-13G>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4033G>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.372-13G>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2022-13G>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.759-13G>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4036G>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2602-13G>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2022-13G>C
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23948
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5472
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19318
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1156
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2690
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2045
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 5.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

17-76113739-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113739
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113739
    reference: chr 17
allele count: 82
allele frequency: 3.356803667922057e-3
allele num: 24428
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4034G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.759-14G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2022-14G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2022-14G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2022-14G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.372-14G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.759-14G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2602-14G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4037G>A
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23638
  bin: 7.5e0
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22714
  bin: 2.5e0
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5227
  bin: 1.25e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 9.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 1161
  bin: 2.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3860
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 7.75e1
  variant carriers: 8
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQ

17-76113740-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113740
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113740
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 24352
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.759-15C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4038C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.759-15C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2022-15C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4035C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2022-15C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2602-15C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.372-15C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2022-15C>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23662
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22791
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19245
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

17-76113741-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113741
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113741
    reference: chr 17
allele count: 1
allele frequency: 4.124391652231296e-5
allele num: 24246
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.759-16T>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4039T>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2022-16T>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.372-16T>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2022-16T>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4036T>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.759-16T>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2022-16T>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2602-16T>A
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5058
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23536
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23032
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18903
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3359
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2869
  bin: 6.25e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/17-76113755-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113755
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113755
    reference: chr 17
allele count: 2
allele frequency: 9.082652134423252e-5
allele num: 22020
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2022-30G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4053G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2602-30G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.759-30G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.759-30G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4050G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2022-30G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2022-30G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.372-30G>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24984
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22397
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1988
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2741
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24160
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

17-76113758-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113758
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113758
    reference: chr 17
allele count: 3
allele frequency: 1.37501145842882e-4
allele num: 21818
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.759-33G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2022-33G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2022-33G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4053G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.759-33G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4056G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2602-33G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.372-33G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2022-33G>A
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24975
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22419
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3738
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3790
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

17-76113759-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113759
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113759
    reference: chr 17
allele count: 1
allele frequency: 4.606172270842929e-5
allele num: 21710
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4057C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.759-34C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4054C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2602-34C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2022-34C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.759-34C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.372-34C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2022-34C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2022-34C>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25010
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3676
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5351
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

17-76113774-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113774
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113774
    reference: chr 17
allele count: 1
allele frequency: 4.717871296471032e-5
allele num: 21196
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4069G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.759-49G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.372-49G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2022-49G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.759-49G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2022-49G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4072G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2602-49G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2022-49G>A
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24258
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23355
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1125
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6049
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3343
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 967
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

17-76113775-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113775
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113775
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 21552
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2022-50C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2022-50C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2022-50C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4073C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.759-50C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2602-50C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4070C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.759-50C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.372-50C>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23505
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1164
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2972
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5922
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5771
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2918
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/17-76113837-A-AC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113837
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113838
    reference: chr 17
allele count: 1
allele frequency: 1.552987948813517e-5
allele num: 64392
alternate allele: AC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.758+45dupG
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2601+45dupG
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4133dupG
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4136dupG
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2021+45dupG
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.371+45dupG
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2021+45dupG
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.758+45dupG
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2021+45dupG
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17311
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4899
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22759
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5097
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5928
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6063
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20701
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2486
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/17-76113838-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113838
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113838
    reference: chr 17
allele count: 189
allele frequency: 2.92379567463878e-3
allele num: 64642
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4136G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4133G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2601+45G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.758+45G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2021+45G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.758+45G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.371+45G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2021+45G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2021+45G>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3016
  bin: 2.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 17252
  bin: 1.25e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22802
  bin: 7.5e0
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4841
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4775
  bin: 1.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3973
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1442
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 8.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3611
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3059
  bin: 1.75e1
  variant carriers: 5
num of homozygotes: 2
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

17-76113848-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113848
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113848
    reference: chr 17
allele count: 1
allele frequency: 1.534024667116647e-5
allele num: 65188
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4146T>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4143T>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.758+35T>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.371+35T>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2021+35T>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2601+35T>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.758+35T>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2021+35T>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2021+35T>A
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4482
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23050
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3909
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4086
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17081
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2300
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5914
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23139
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/17-76113866-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113866
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113866
    reference: chr 17
allele count: 1
allele frequency: 1.4972301242701e-5
allele num: 66790
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2021+17G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2601+17G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.758+17G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4164G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.758+17G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2021+17G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2021+17G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4161G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.371+17G>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16276
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23069
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3474
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5915
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1340
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2879
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD

17-76113869-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113869
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113869
    reference: chr 17
allele count: 1
allele frequency: 1.466619734835152e-5
allele num: 68184
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4167G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2601+14G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.371+14G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2021+14G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.758+14G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.758+14G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2021+14G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2021+14G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4164G>A
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22810
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6978
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15980
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5061
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1082
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

17-76113871-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113871
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113871
    reference: chr 17
allele count: 1
allele frequency: 1.461646398503274e-5
allele num: 68416
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4169G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2021+12G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.758+12G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2021+12G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2601+12G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4166G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.371+12G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2021+12G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.758+12G>A
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15623
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22734
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25133
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2948
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff

17-76113872-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113872
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113872
    reference: chr 17
allele count: 2188
allele frequency: 3.149651638164334e-2
allele num: 69468
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4170C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4167C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2021+11C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.758+11C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2601+11C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2021+11C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.758+11C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.371+11C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2021+11C>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3454
  bin: 1.75e1
  variant carriers: 639
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 2.75e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 3.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 8054
  bin: 2.25e1
  variant carriers: 360
genotype depth: GenotypeDepth
  all individuals: 15336
  bin: 1.25e1
  variant carriers: 729
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 2.5e0
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22167
  bin: 7.5e0
  variant carriers: 312
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 9.75e1
  variant carriers: 194
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 3.25e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 9.25e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 935
  bin: 1.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 4.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 2220
  bin: 3.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 2.5e0
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 2809
  bin: 7.5e0
  variant carriers: 7
num of homozygotes: 16
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

17-76113873-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113873
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113873
    reference: chr 17
allele count: 3
allele frequency: 4.30416068866571e-5
allele num: 69700
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.371+10G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.758+10G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2021+10G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4168G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.758+10G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4171G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2601+10G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2021+10G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2021+10G>A
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15149
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 867
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25343
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4899
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

17-76113881-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113881
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113881
    reference: chr 17
allele count: 1
allele frequency: 1.401698859017129e-5
allele num: 71342
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.758+2T>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2021+2T>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.758+2T>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2021+2T>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4179T>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.371+2T>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4176T>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2601+2T>C
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2021+2T>C
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14227
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10068
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10282
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4401
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 4.75e1
  variant carriers: 0
hgvs: c.2021+2T>C
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

17-76113890-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113890
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113890
    reference: chr 17
allele count: 4
allele frequency: 5.550621669626998e-5
allele num: 72064
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2014G>A
  hgvsp: ENSP00000465261.1:p.Val672Ile
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2014G>A
  hgvsp: ENSP00000313408.2:p.Val672Ile
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4185G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.751G>A
  hgvsp: ENSP00000464853.1:p.Val251Ile
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4188G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.364G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2014G>A
  hgvsp: ENSP00000376260.2:p.Val672Ile
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2594G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.751G>A
  hgvsp: ENSP00000313479.4:p.Val251Ile
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3591
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13878
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21887
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4302
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Val672Ile
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

17-76113891-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113891
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113891
    reference: chr 17
allele count: 4
allele frequency: 5.544159228253035e-5
allele num: 72148
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2593C>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.750C>A
  hgvsp: ENST00000322933.4:c.750C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.363C>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2013C>A
  hgvsp: ENST00000322914.3:c.2013C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.750C>A
  hgvsp: ENST00000591436.1:c.750C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2013C>A
  hgvsp: ENST00000392467.3:c.2013C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2013C>A
  hgvsp: ENST00000590602.1:c.2013C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4186C>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4189C>A
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9962
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21864
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13783
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1008
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5880
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala671Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum

17-76113892-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113892
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113892
    reference: chr 17
allele count: 2
allele frequency: 2.768242719521648e-5
allele num: 72248
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2012C>T
  hgvsp: ENSP00000465261.1:p.Ala671Val
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.362C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2012C>T
  hgvsp: ENSP00000313408.2:p.Ala671Val
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.749C>T
  hgvsp: ENSP00000313479.4:p.Ala250Val
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2012C>T
  hgvsp: ENSP00000376260.2:p.Ala671Val
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.749C>T
  hgvsp: ENSP00000464853.1:p.Ala250Val
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4190C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2592C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4187C>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2308
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13821
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3862
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21872
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9712
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5877
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala671Val
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

17-76113894-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113894
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113894
    reference: chr 17
allele count: 1
allele frequency: 1.37680361273268e-5
allele num: 72632
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.747C>T
  hgvsp: ENST00000591436.1:c.747C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2010C>T
  hgvsp: ENST00000590602.1:c.2010C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4189C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2010C>T
  hgvsp: ENST00000392467.3:c.2010C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2590C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.360C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4192C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.747C>T
  hgvsp: ENST00000322933.4:c.747C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2010C>T
  hgvsp: ENST00000322914.3:c.2010C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13729
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21692
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25532
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2138
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Tyr670Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

17-76113900-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113900
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113900
    reference: chr 17
allele count: 1
allele frequency: 1.363809939446839e-5
allele num: 73324
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.354C>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.2004C>G
  hgvsp: ENST00000322914.3:c.2004C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.741C>G
  hgvsp: ENST00000591436.1:c.741C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.741C>G
  hgvsp: ENST00000322933.4:c.741C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.2004C>G
  hgvsp: ENST00000590602.1:c.2004C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4198C>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.2004C>G
  hgvsp: ENST00000392467.3:c.2004C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2584C>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4195C>G
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4336
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13611
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1199
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4137
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9553
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu668Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-76113906-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113906
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113906
    reference: chr 17
allele count: 7
allele frequency: 9.48895214856988e-5
allele num: 73770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2578C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4201C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1998C>T
  hgvsp: ENST00000392467.3:c.1998C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1998C>T
  hgvsp: ENST00000590602.1:c.1998C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.735C>T
  hgvsp: ENST00000591436.1:c.735C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.735C>T
  hgvsp: ENST00000322933.4:c.735C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4204C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.348C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1998C>T
  hgvsp: ENST00000322914.3:c.1998C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4535
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13458
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10030
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25325
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1202
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val666Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

17-76113911-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113911
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113911
    reference: chr 17
allele count: 8
allele frequency: 1.086926985679737e-4
allele num: 73602
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4206G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.730G>A
  hgvsp: ENSP00000464853.1:p.Ala244Thr
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.730G>A
  hgvsp: ENSP00000313479.4:p.Ala244Thr
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1993G>A
  hgvsp: ENSP00000313408.2:p.Ala665Thr
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.343G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1993G>A
  hgvsp: ENSP00000465261.1:p.Ala665Thr
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1993G>A
  hgvsp: ENSP00000376260.2:p.Ala665Thr
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4209G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2573G>A
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21060
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10321
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2428
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13314
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10093
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 897
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala665Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS

17-76113912-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113912
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113912
    reference: chr 17
allele count: 19
allele frequency: 2.557407058443482e-4
allele num: 74294
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.729C>T
  hgvsp: ENST00000591436.1:c.729C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1992C>T
  hgvsp: ENST00000590602.1:c.1992C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4207C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2572C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.729C>T
  hgvsp: ENST00000322933.4:c.729C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1992C>T
  hgvsp: ENST00000322914.3:c.1992C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4210C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1992C>T
  hgvsp: ENST00000392467.3:c.1992C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.342C>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2405
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13245
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21094
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4520
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10530
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25272
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10533
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala664Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

17-76113916-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113916
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113916
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 74730
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1988G>A
  hgvsp: ENSP00000465261.1:p.Gly663Asp
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.725G>A
  hgvsp: ENSP00000313479.4:p.Gly242Asp
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.725G>A
  hgvsp: ENSP00000464853.1:p.Gly242Asp
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4214G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4211G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1988G>A
  hgvsp: ENSP00000376260.2:p.Gly663Asp
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2568G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1988G>A
  hgvsp: ENSP00000313408.2:p.Gly663Asp
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.338G>A
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4498
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20942
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10548
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4005
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1094
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly663Asp
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

17-76113917-CCAGGAAGG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113917
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113909
    reference: chr 17
allele count: 1
allele frequency: 1.335327422283944e-5
allele num: 74888
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsp: ENSP00000313408.2:p.Ala660GlyfsTer98
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsp: ENSP00000465261.1:p.Ala660GlyfsTer98
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.716_723delCCTTCCTG
  hgvsp: ENSP00000464853.1:p.Ala239GlyfsTer98
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.716_723delCCTTCCTG
  hgvsp: ENSP00000313479.4:p.Ala239GlyfsTer98
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.329_336delCCTTCCTG
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsp: ENSP00000376260.2:p.Ala660GlyfsTer98
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4385
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20860
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3854
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5875
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2117
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala660GlyfsTer98
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: CCAGGAAGG
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

17-76113925-G-GTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113925
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113927
    reference: chr 17
allele count: 1
allele frequency: 1.320794590025359e-5
allele num: 75712
alternate allele: GTT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.715_716insAA
  hgvsp: ENSP00000313479.4:p.Ala239GlufsTer17
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1978_1979insAA
  hgvsp: ENSP00000465261.1:p.Ala660GlufsTer17
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.715_716insAA
  hgvsp: ENSP00000464853.1:p.Ala239GlufsTer17
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.328_329insAA
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1978_1979insAA
  hgvsp: ENSP00000376260.2:p.Ala660GlufsTer17
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2558_2559insAA
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1978_1979insAA
  hgvsp: ENSP00000313408.2:p.Ala660GlufsTer17
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4221_324-4220insAA
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4224_1228-4223insAA
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 4261
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11478
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12917
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 981
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3790
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1919
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala660GlufsTer17
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

17-76113927-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113927
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113927
    reference: chr 17
allele count: 1
allele frequency: 1.322366507101108e-5
allele num: 75622
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4222C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1977C>T
  hgvsp: ENST00000590602.1:c.1977C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1977C>T
  hgvsp: ENST00000322914.3:c.1977C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1977C>T
  hgvsp: ENST00000392467.3:c.1977C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.327C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.714C>T
  hgvsp: ENST00000591436.1:c.714C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.714C>T
  hgvsp: ENST00000322933.4:c.714C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2557C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4225C>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12817
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2739
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11609
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20401
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25035
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro659Pro
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/17-76113942-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113942
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113942
    reference: chr 17
allele count: 1
allele frequency: 1.319609395618897e-5
allele num: 75780
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1962G>T
  hgvsp: ENST00000590602.1:c.1962G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1962G>T
  hgvsp: ENST00000392467.3:c.1962G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.699G>T
  hgvsp: ENST00000591436.1:c.699G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1962G>T
  hgvsp: ENST00000322914.3:c.1962G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4240G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.699G>T
  hgvsp: ENST00000322933.4:c.699G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2542G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4237G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.312G>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5024
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12805
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10753
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2870
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 907
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3557
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1127
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr654Thr
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

17-76113943-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113943
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113943
    reference: chr 17
allele count: 6
allele frequency: 7.90680512360972e-5
allele num: 75884
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.698C>T
  hgvsp: ENSP00000464853.1:p.Thr233Met
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4238C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2541C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1961C>T
  hgvsp: ENSP00000376260.2:p.Thr654Met
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.698C>T
  hgvsp: ENSP00000313479.4:p.Thr233Met
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4241C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1961C>T
  hgvsp: ENSP00000465261.1:p.Thr654Met
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.311C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1961C>T
  hgvsp: ENSP00000313408.2:p.Thr654Met
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10851
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12768
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20311
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4969
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1390
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3612
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr654Met
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum

17-76113943-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113943
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113943
    reference: chr 17
allele count: 2
allele frequency: 2.635601707869907e-5
allele num: 75884
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.698C>G
  hgvsp: ENSP00000313479.4:p.Thr233Arg
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4241C>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1961C>G
  hgvsp: ENSP00000465261.1:p.Thr654Arg
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4238C>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2541C>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1961C>G
  hgvsp: ENSP00000313408.2:p.Thr654Arg
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.698C>G
  hgvsp: ENSP00000464853.1:p.Thr233Arg
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1961C>G
  hgvsp: ENSP00000376260.2:p.Thr654Arg
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.311C>G
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12768
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20311
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4969
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10851
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3612
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1390
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5879
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr654Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

17-76113947-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113947
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113947
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 75664
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1957C>A
  hgvsp: ENSP00000465261.1:p.Leu653Ile
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.307C>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2537C>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1957C>A
  hgvsp: ENSP00000376260.2:p.Leu653Ile
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4245C>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.694C>A
  hgvsp: ENSP00000464853.1:p.Leu232Ile
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.694C>A
  hgvsp: ENSP00000313479.4:p.Leu232Ile
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4242C>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1957C>A
  hgvsp: ENSP00000313408.2:p.Leu653Ile
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12764
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10765
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5014
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20398
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu653Ile
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

17-76113953-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113953
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113953
    reference: chr 17
allele count: 1
allele frequency: 1.323311454583951e-5
allele num: 75568
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.688G>A
  hgvsp: ENSP00000313479.4:p.Val230Ile
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4251G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1951G>A
  hgvsp: ENSP00000465261.1:p.Val651Ile
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.688G>A
  hgvsp: ENSP00000464853.1:p.Val230Ile
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1951G>A
  hgvsp: ENSP00000376260.2:p.Val651Ile
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.301G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2531G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1951G>A
  hgvsp: ENSP00000313408.2:p.Val651Ile
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4248G>A
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10999
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4847
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12759
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2103
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1181
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1343
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val651Ile
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ

17-76113954-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113954
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113954
    reference: chr 17
allele count: 13894
allele frequency: 1.751418126812051e-1
allele num: 79330
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2530C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1950C>T
  hgvsp: ENST00000322914.3:c.1950C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4252C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.687C>T
  hgvsp: ENST00000591436.1:c.687C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.687C>T
  hgvsp: ENST00000322933.4:c.687C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4249C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1950C>T
  hgvsp: ENST00000392467.3:c.1950C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1950C>T
  hgvsp: ENST00000590602.1:c.1950C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.300C>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 3.75e1
  variant carriers: 175
genotype depth: GenotypeDepth
  all individuals: 12894
  bin: 1.25e1
  variant carriers: 3604
genotype depth: GenotypeDepth
  all individuals: 10455
  bin: 2.25e1
  variant carriers: 2130
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 4.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 6936
  bin: 1.75e1
  variant carriers: 3802
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.25e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 8.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 3.25e1
  variant carriers: 370
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 2.75e1
  variant carriers: 879
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 17787
  bin: 7.5e0
  variant carriers: 1328
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 9.75e1
  variant carriers: 1746
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 2.5e0
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 8649
  bin: 6.25e1
  variant carriers: 184
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 1.75e1
  variant carriers: 93
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 8.25e1
  variant carriers: 236
genotype quality: GenotypeQuality
  all individuals: 2227
  bin: 3.25e1
  variant carriers: 139
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 4.25e1
  variant carriers: 125
hgvs: p.Thr650Thr
num of homozygotes: 970
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

17-76113954-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113954
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113954
    reference: chr 17
allele count: 2
allele frequency: 2.52111433253498e-5
allele num: 79330
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4249C>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.300C>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1950C>G
  hgvsp: ENST00000590602.1:c.1950C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4252C>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1950C>G
  hgvsp: ENST00000392467.3:c.1950C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1950C>G
  hgvsp: ENST00000322914.3:c.1950C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.687C>G
  hgvsp: ENST00000591436.1:c.687C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2530C>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.687C>G
  hgvsp: ENST00000322933.4:c.687C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10455
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12894
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17787
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6936
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2384
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1884
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20170
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr650Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/17-76113981-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113981
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113981
    reference: chr 17
allele count: 1
allele frequency: 1.467007012293519e-5
allele num: 68166
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2503G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.660G>T
  hgvsp: ENST00000591436.1:c.660G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.273G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4279G>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1923G>T
  hgvsp: ENST00000322914.3:c.1923G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1923G>T
  hgvsp: ENST00000392467.3:c.1923G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.660G>T
  hgvsp: ENST00000322933.4:c.660G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1923G>T
  hgvsp: ENST00000590602.1:c.1923G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4276G>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13362
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3547
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8446
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22630
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1530
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5633
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg641Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

17-76113982-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113982
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113982
    reference: chr 17
allele count: 5
allele frequency: 7.365722872042662e-5
allele num: 67882
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.659G>A
  hgvsp: ENSP00000313479.4:p.Arg220Gln
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.659G>A
  hgvsp: ENSP00000464853.1:p.Arg220Gln
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.272G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4277G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1922G>A
  hgvsp: ENSP00000376260.2:p.Arg641Gln
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4280G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1922G>A
  hgvsp: ENSP00000313408.2:p.Arg641Gln
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2502G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1922G>A
  hgvsp: ENSP00000465261.1:p.Arg641Gln
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3226
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22768
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8279
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2637
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13395
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3024
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5636
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Arg641Gln
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP

17-76113983-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113983
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113983
    reference: chr 17
allele count: 1
allele frequency: 1.474013148197282e-5
allele num: 67842
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.271C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.658C>T
  hgvsp: ENSP00000464853.1:p.Arg220Trp
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1921C>T
  hgvsp: ENSP00000376260.2:p.Arg641Trp
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1921C>T
  hgvsp: ENSP00000465261.1:p.Arg641Trp
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2501C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1921C>T
  hgvsp: ENSP00000313408.2:p.Arg641Trp
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4278C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4281C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.658C>T
  hgvsp: ENSP00000313479.4:p.Arg220Trp
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22829
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8389
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5634
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3000
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1445
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2667
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg641Trp
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

17-76113983-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113983
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113983
    reference: chr 17
allele count: 4
allele frequency: 5.896052592789128e-5
allele num: 67842
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1921C>A
  hgvsp: ENST00000590602.1:c.1921C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.271C>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2501C>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.658C>A
  hgvsp: ENST00000591436.1:c.658C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.658C>A
  hgvsp: ENST00000322933.4:c.658C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4281C>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1921C>A
  hgvsp: ENST00000392467.3:c.1921C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1921C>A
  hgvsp: ENST00000322914.3:c.1921C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4278C>A
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13355
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22829
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8389
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5634
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3000
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg641Arg
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

17-76113985-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113985
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113985
    reference: chr 17
allele count: 3
allele frequency: 4.46508305054474e-5
allele num: 67188
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1919G>A
  hgvsp: ENSP00000376260.2:p.Arg640His
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4283G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4280G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1919G>A
  hgvsp: ENSP00000313408.2:p.Arg640His
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2499G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1919G>A
  hgvsp: ENSP00000465261.1:p.Arg640His
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.269G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.656G>A
  hgvsp: ENSP00000464853.1:p.Arg219His
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.656G>A
  hgvsp: ENSP00000313479.4:p.Arg219His
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8200
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23025
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13419
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1396
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg640His
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

17-76113986-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113986
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113986
    reference: chr 17
allele count: 7
allele frequency: 1.050672430355427e-4
allele num: 66624
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1918C>T
  hgvsp: ENSP00000376260.2:p.Arg640Cys
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.655C>T
  hgvsp: ENSP00000464853.1:p.Arg219Cys
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4284C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1918C>T
  hgvsp: ENSP00000465261.1:p.Arg640Cys
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1918C>T
  hgvsp: ENSP00000313408.2:p.Arg640Cys
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.655C>T
  hgvsp: ENSP00000313479.4:p.Arg219Cys
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.268C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4281C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2498C>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3469
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13505
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1410
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3592
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg640Cys
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

17-76113987-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113987
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113987
    reference: chr 17
allele count: 3
allele frequency: 4.510057428064584e-5
allele num: 66518
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1917G>A
  hgvsp: ENST00000590602.1:c.1917G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.267G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1917G>A
  hgvsp: ENST00000322914.3:c.1917G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.654G>A
  hgvsp: ENST00000322933.4:c.654G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1917G>A
  hgvsp: ENST00000392467.3:c.1917G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.654G>A
  hgvsp: ENST00000591436.1:c.654G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4285G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4282G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2497G>A
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13449
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3210
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1644
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1389
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5634
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Pro639Pro
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD

17-76113988-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113988
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113988
    reference: chr 17
allele count: 6
allele frequency: 9.020114856129169e-5
allele num: 66518
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4286C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.653C>T
  hgvsp: ENSP00000464853.1:p.Pro218Leu
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1916C>T
  hgvsp: ENSP00000313408.2:p.Pro639Leu
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2496C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1916C>T
  hgvsp: ENSP00000465261.1:p.Pro639Leu
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.653C>T
  hgvsp: ENSP00000313479.4:p.Pro218Leu
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.266C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1916C>T
  hgvsp: ENSP00000376260.2:p.Pro639Leu
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4283C>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2557
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3081
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23329
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13399
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3469
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8016
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3580
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro639Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

17-76113990-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113990
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113990
    reference: chr 17
allele count: 4
allele frequency: 6.062443164595332e-5
allele num: 65980
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1914G>A
  hgvsp: ENST00000590602.1:c.1914G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4285G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.651G>A
  hgvsp: ENST00000591436.1:c.651G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.651G>A
  hgvsp: ENST00000322933.4:c.651G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2494G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1914G>A
  hgvsp: ENST00000322914.3:c.1914G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1914G>A
  hgvsp: ENST00000392467.3:c.1914G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4288G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.264G>A
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23460
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3041
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13412
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2524
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1470
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala638Ala
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP

17-76113991-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76113991
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76113991
    reference: chr 17
allele count: 4
allele frequency: 6.082355087890031e-5
allele num: 65764
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.650C>T
  hgvsp: ENSP00000313479.4:p.Ala217Val
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4289C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1913C>T
  hgvsp: ENSP00000465261.1:p.Ala638Val
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.650C>T
  hgvsp: ENSP00000464853.1:p.Ala217Val
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.263C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1913C>T
  hgvsp: ENSP00000313408.2:p.Ala638Val
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1913C>T
  hgvsp: ENSP00000376260.2:p.Ala638Val
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4286C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2493C>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3618
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13414
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23571
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2474
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2917
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 867
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala638Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

17-76114002-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76114002
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76114002
    reference: chr 17
allele count: 1
allele frequency: 1.580577859265347e-5
allele num: 63268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.639C>T
  hgvsp: ENST00000322933.4:c.639C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1902C>T
  hgvsp: ENST00000322914.3:c.1902C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4300C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.639C>T
  hgvsp: ENST00000591436.1:c.639C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2482C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1902C>T
  hgvsp: ENST00000590602.1:c.1902C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1902C>T
  hgvsp: ENST00000392467.3:c.1902C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4297C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.252C>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13844
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2307
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24082
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2951
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4469
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7632
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala634Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

17-76114007-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76114007
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76114007
    reference: chr 17
allele count: 1
allele frequency: 1.607303587501607e-5
allele num: 62216
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2477C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.634C>T
  hgvsp: ENST00000591436.1:c.634C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4305C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1897C>T
  hgvsp: ENST00000322914.3:c.1897C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1897C>T
  hgvsp: ENST00000590602.1:c.1897C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1897C>T
  hgvsp: ENST00000392467.3:c.1897C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.634C>T
  hgvsp: ENST00000322933.4:c.634C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.247C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4302C>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14024
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24309
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4748
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31246
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7522
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2273
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu633Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

17-76114010-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76114010
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76114010
    reference: chr 17
allele count: 1
allele frequency: 1.627498209751969e-5
allele num: 61444
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1894C>T
  hgvsp: ENSP00000465261.1:p.Leu632Phe
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1894C>T
  hgvsp: ENSP00000313408.2:p.Leu632Phe
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2474C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4305C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1894C>T
  hgvsp: ENSP00000376260.2:p.Leu632Phe
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.631C>T
  hgvsp: ENSP00000313479.4:p.Leu211Phe
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.244C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.631C>T
  hgvsp: ENSP00000464853.1:p.Leu211Phe
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4308C>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5084
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5183
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5631
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2333
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu632Phe
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

17-76114011-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76114011
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76114011
    reference: chr 17
allele count: 1
allele frequency: 1.642090052218464e-5
allele num: 60898
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.630C>A
  hgvsp: ENSP00000313479.4:p.Ser210Arg
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1893C>A
  hgvsp: ENSP00000313408.2:p.Ser631Arg
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2473C>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1893C>A
  hgvsp: ENSP00000376260.2:p.Ser631Arg
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4306C>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1893C>A
  hgvsp: ENSP00000465261.1:p.Ser631Arg
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.243C>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4309C>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.630C>A
  hgvsp: ENSP00000464853.1:p.Ser210Arg
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24288
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14431
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5701
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31021
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser631Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum

17-76114022-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76114022
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76114022
    reference: chr 17
allele count: 1
allele frequency: 1.731601731601731e-5
allele num: 57750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4320C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4317C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2468-6C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1888-6C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.625-6C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1888-6C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.232C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.625-6C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1888-6C>T
  variant of: http://identifiers.org/hgnc/18021
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15187
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23871
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7080
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4621
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7259
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
hgvs: c.1888-6C>T
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD

17-76114029-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76114029
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76114029
    reference: chr 17
allele count: 16
allele frequency: 2.902652298537789e-4
allele num: 55122
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4324C>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2468-13C>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.225C>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.625-13C>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4327C>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1888-13C>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1888-13C>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.625-13C>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1888-13C>G
  variant of: http://identifiers.org/hgnc/18021
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15210
  bin: 1.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8609
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23601
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3331
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28708
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8787
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

17-76114033-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76114033
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76114033
    reference: chr 17
allele count: 1
allele frequency: 1.85721714582869e-5
allele num: 53844
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.221G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1888-17G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1888-17G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2468-17G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.625-17G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.625-17G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4328G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4331G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1888-17G>A
  variant of: http://identifiers.org/hgnc/18021
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15105
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23534
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2609
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3341
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2181
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9402
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3141
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

17-76114034-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76114034
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76114034
    reference: chr 17
allele count: 1
allele frequency: 1.853224610822832e-5
allele num: 53960
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4332C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2468-18C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.625-18C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1888-18C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.220C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4329C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1888-18C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1888-18C>T
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.625-18C>T
  variant of: http://identifiers.org/hgnc/18021
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15093
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28993
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1948
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1847
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

17-76114035-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76114035
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76114035
    reference: chr 17
allele count: 1
allele frequency: 1.855838467819761e-5
allele num: 53884
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.625-19G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4333G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.625-19G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2468-19G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4330G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1888-19G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1888-19G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1888-19G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.219G>A
  variant of: http://identifiers.org/hgnc/18021
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15088
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23639
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3190
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3401
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD

http://identifiers.org/exac.variant/17-76114042-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76114042
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76114042
    reference: chr 17
allele count: 1
allele frequency: 1.950154062170911e-5
allele num: 51278
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4340T>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1888-26T>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1888-26T>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.625-26T>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2468-26T>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.212T>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4337T>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1888-26T>G
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.625-26T>G
  variant of: http://identifiers.org/hgnc/18021
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2291
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10888
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14894
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23049
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11437
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2429
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2783
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ

17-76114048-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76114048
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76114048
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 48766
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2468-32G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1888-32G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.206G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4343G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.625-32G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1888-32G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.625-32G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4346G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1888-32G>A
  variant of: http://identifiers.org/hgnc/18021
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23158
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12013
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13883
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3793
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3478
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2719
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 804
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

17-76114059-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76114059
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 76114059
    reference: chr 17
allele count: 1
allele frequency: 2.34796900680911e-5
allele num: 42590
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000593044
  gene symbol: TMC6
  hgvsc: ENST00000593044.1:n.2468-43G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000464853
  ensembl transcript: ENST00000591436
  gene symbol: TMC6
  hgvsc: ENST00000591436.1:c.625-43G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313479
  ensembl transcript: ENST00000322933
  gene symbol: TMC6
  hgvsc: ENST00000322933.4:c.625-43G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000589933
  gene symbol: TMC6
  hgvsc: ENST00000589933.1:n.195G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl transcript: ENST00000592076
  gene symbol: TMC6
  hgvsc: ENST00000592076.1:n.324-4354G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000306405
  ensembl transcript: ENST00000306591
  gene symbol: TMC6
  hgvsc: ENST00000306591.7:c.1228-4357G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000465261
  ensembl transcript: ENST00000590602
  gene symbol: TMC6
  hgvsc: ENST00000590602.1:c.1888-43G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000313408
  ensembl transcript: ENST00000322914
  gene symbol: TMC6
  hgvsc: ENST00000322914.3:c.1888-43G>A
  variant of: http://identifiers.org/hgnc/18021
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000141524
  ensembl protein: ENSP00000376260
  ensembl transcript: ENST00000392467
  gene symbol: TMC6
  hgvsc: ENST00000392467.3:c.1888-43G>A
  variant of: http://identifiers.org/hgnc/18021
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12709
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 220
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1742
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2531
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3205
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1180
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 403
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 5.030181086519115e-4
allele num: 1988
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3032
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16314
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9026
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.279e0

FS
type: SiteQuality
SIO_000300: 1.378e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.34e-1

DP
type: SiteQuality
SIO_000300: 5.84017e5

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

QD
type: SiteQuality
SIO_000300: 6.79e0

GenotypeQuality
all individuals: 13819
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 145
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2477
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 308
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3318
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27793
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1166
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16200
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3024
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1984
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1726
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.109139307897072e-4
allele num: 9016
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.97e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.15e-1

QD
type: SiteQuality
SIO_000300: 4.1e0

VQSLOD
type: SiteQuality
SIO_000300: -1.752e0

MQRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

DP
type: SiteQuality
SIO_000300: 5.8408e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 285
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2983
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1146
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14688
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3482
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 158
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28497
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1864
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 262
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2962
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8930
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 2.014e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.56e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.97e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.539e0

FS
type: SiteQuality
SIO_000300: 7.068e0

DP
type: SiteQuality
SIO_000300: 5.73206e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

GenotypeQuality
all individuals: 1144
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3268
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2505
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27325
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 227
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1018
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1049
bin: 6.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 246
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.786102062975027e-5
allele num: 14736
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 6.799637352674524e-4
allele num: 8824
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1748
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.557e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.385e-1

DP
type: SiteQuality
SIO_000300: 5.63549e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

FS
type: SiteQuality
SIO_000300: 2.466e0

MQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

QD
type: SiteQuality
SIO_000300: 1.055e1

MQ
type: SiteQuality
SIO_000300: 5.936e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.25e-2

GenotypeQuality
all individuals: 243
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3120
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2451
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 963
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1480
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3169
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 387
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 7.175660160734788e-5
allele num: 13936
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2764
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.12e-1

MQ
type: SiteQuality
SIO_000300: 5.855e1

VQSLOD
type: SiteQuality
SIO_000300: -6.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.12e-1

DP
type: SiteQuality
SIO_000300: 5.49855e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.12e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.1e0

GenotypeQuality
all individuals: 993
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1448
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3178
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2426
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 935
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2999
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 223
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 444
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 7.564296520423601e-4
allele num: 1322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 232
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2710
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13496
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.41e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.315e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

QD
type: SiteQuality
SIO_000300: 6.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.44e-2

DP
type: SiteQuality
SIO_000300: 5.44753e5

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

FS
type: SiteQuality
SIO_000300: 3.916e0

MQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 512
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2712
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1296
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8712
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e0

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.496e0

QD
type: SiteQuality
SIO_000300: 2.62e0

DP
type: SiteQuality
SIO_000300: 5.42856e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.38e-2

FS
type: SiteQuality
SIO_000300: 7.782e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 17935
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13010
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1216
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 228
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8686
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.307e0

FS
type: SiteQuality
SIO_000300: 3.522e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.52e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.22e0

MQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.175e0

DP
type: SiteQuality
SIO_000300: 5.34441e5

QD
type: SiteQuality
SIO_000300: 6.27e0

GenotypeQuality
all individuals: 144
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2736
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 1304
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 148
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1150
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 7.686395080707148e-4
allele num: 2602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 218
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.36e-1

DP
type: SiteQuality
SIO_000300: 5.24727e5

FS
type: SiteQuality
SIO_000300: 3.131e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.77e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

QD
type: SiteQuality
SIO_000300: 1.01e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3112
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1242
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1064
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.269930532583527e-5
allele num: 12092
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1368
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.953e1

VQSLOD
type: SiteQuality
SIO_000300: -6.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

DP
type: SiteQuality
SIO_000300: 5.12975e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.99e-2

QD
type: SiteQuality
SIO_000300: 1.083e1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 474
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
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variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12006
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1050
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.11433e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.04e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

QD
type: SiteQuality
SIO_000300: 8.69e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 876
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 391
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variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1200
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 946
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11162
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.743e-1

QD
type: SiteQuality
SIO_000300: 1.249e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

DP
type: SiteQuality
SIO_000300: 5.00102e5

MQRankSum
type: SiteQuality
SIO_000300: 6.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.56e-2

FS
type: SiteQuality
SIO_000300: 7.383e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 6

GenotypeQuality
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bin: 7.5e0
variant carriers: 4

GenotypeQuality
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bin: 4.75e1
variant carriers: 8

GenotypeQuality
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variant carriers: 9

GenotypeQuality
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variant carriers: 10

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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variant carriers: 15

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 84

GenotypeQuality
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bin: 2.25e1
variant carriers: 5

GenotypeQuality
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bin: 6.75e1
variant carriers: 10

GenotypeQuality
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variant carriers: 6

GenotypeQuality
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bin: 8.25e1
variant carriers: 6

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1210
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.150537634408602e-3
allele num: 930
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 1.2636899747262e-3
allele num: 2374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 58
allele frequency: 5.239385727190606e-3
allele num: 11070
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 1.298701298701299e-2
allele num: 308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

South Asian
type: Population
allele count: 15
allele frequency: 1.801152737752161e-3
allele num: 8328
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.44e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.38e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

FS
type: SiteQuality
SIO_000300: 1.109e0

QD
type: SiteQuality
SIO_000300: 1.328e1

DP
type: SiteQuality
SIO_000300: 4.95244e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 153
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GenotypeQuality
all individuals: 148
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10994
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8356
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 928
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 298
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 3.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.45e-2

DP
type: SiteQuality
SIO_000300: 4.95652e5

VQSLOD
type: SiteQuality
SIO_000300: -1.211e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

QD
type: SiteQuality
SIO_000300: 6.17e0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
all individuals: 22532
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GenotypeQuality
all individuals: 516
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 413
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GenotypeQuality
all individuals: 1424
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GenotypeQuality
all individuals: 3946
bin: 1.25e1
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GenotypeQuality
all individuals: 285
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GenotypeQuality
all individuals: 158
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GenotypeQuality
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GenotypeQuality
all individuals: 841
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GenotypeQuality
all individuals: 975
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8354
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.084598698481562e-3
allele num: 922
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 282
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10914
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-2

VQSLOD
type: SiteQuality
SIO_000300: -7.155e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 8.880000000000001e0

DP
type: SiteQuality
SIO_000300: 4.93192e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.22e-1

FS
type: SiteQuality
SIO_000300: 2.627e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
all individuals: 4253
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2160
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 9.84251968503937e-4
allele num: 1016
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.049758555532228e-4
allele num: 9526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8194
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.29e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.76e-1

DP
type: SiteQuality
SIO_000300: 4.74041e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.34e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

FS
type: SiteQuality
SIO_000300: 5.557e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.82e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.257e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 474
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GenotypeQuality
all individuals: 2861
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2138
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 972
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8182
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 3.183361629881155e-4
allele num: 9424
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

QD
type: SiteQuality
SIO_000300: 1.339e1

VQSLOD
type: SiteQuality
SIO_000300: -8.951e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.649e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.88e-2

DP
type: SiteQuality
SIO_000300: 4.7506e5

GenotypeQuality
all individuals: 989
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 77
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GenotypeQuality
all individuals: 176
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9334
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 4.681647940074906e-4
allele num: 2136
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 728
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 956
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8184
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.536e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.94e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.589e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.036e0

QD
type: SiteQuality
SIO_000300: 1.484e1

DP
type: SiteQuality
SIO_000300: 4.74839e5

GenotypeQuality
all individuals: 185
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 613
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 173
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variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2054
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.115573404730031e-4
allele num: 8964
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

MQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.14e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.98e0

FS
type: SiteQuality
SIO_000300: 1.1982e1

DP
type: SiteQuality
SIO_000300: 4.82631e5

VQSLOD
type: SiteQuality
SIO_000300: -8.512e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

GenotypeQuality
all individuals: 161
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 549
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 980
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variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2070
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 922
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8224
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.031e1

DP
type: SiteQuality
SIO_000300: 4.85929e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.02e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.288e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 110
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5320
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4664
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2020
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 464
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5202
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.629616845012081e-5
allele num: 11588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34112
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.039104e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.19e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

QD
type: SiteQuality
SIO_000300: 8.52e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.87e0

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.87e-1

MQ
type: SiteQuality
SIO_000300: 6.236e1

GenotypeQuality
all individuals: 89
bin: 5.75e1
variant carriers: 7

GenotypeQuality
all individuals: 562
bin: 5.25e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 4

GenotypeQuality
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bin: 9.25e1
variant carriers: 8

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 7

GenotypeQuality
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bin: 9.75e1
variant carriers: 188

GenotypeQuality
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variant carriers: 4

GenotypeQuality
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bin: 8.25e1
variant carriers: 7

GenotypeQuality
all individuals: 5336
bin: 2.75e1
variant carriers: 5

GenotypeQuality
all individuals: 6040
bin: 3.25e1
variant carriers: 2

Latino
type: Population
allele count: 18
allele frequency: 2.828409805153991e-3
allele num: 6364
num of homozygotes: 0

African
type: Population
allele count: 163
allele frequency: 3.095328522597797e-2
allele num: 5266
num of homozygotes: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2026
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 2.335493664973434e-4
allele num: 34254
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.7e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

DP
type: SiteQuality
SIO_000300: 1.042571e6

QD
type: SiteQuality
SIO_000300: 1.323e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.49e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 171
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
all individuals: 165
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GenotypeQuality
all individuals: 109
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variant carriers: 0

GenotypeQuality
all individuals: 5997
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5290
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.60141063134354e-5
allele num: 11626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2100
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.837e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.04e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.67e0

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.438e0

DP
type: SiteQuality
SIO_000300: 1.052861e6

QD
type: SiteQuality
SIO_000300: 3.22e0

GenotypeQuality
all individuals: 23882
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5246
bin: 6.25e1
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GenotypeQuality
all individuals: 496
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 856
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5547
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2162
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.81864817633463e-5
allele num: 35478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11772
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 474
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.814e0

MQRankSum
type: SiteQuality
SIO_000300: -1.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.5e-3

FS
type: SiteQuality
SIO_000300: 3.1e0

DP
type: SiteQuality
SIO_000300: 1.083802e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.73e-1

QD
type: SiteQuality
SIO_000300: 4.26e0

GenotypeQuality
all individuals: 109
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7082
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6666
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36358
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4958
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.441668073611346e-5
allele num: 11846
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.101062e6

QD
type: SiteQuality
SIO_000300: 1.265e1

VQSLOD
type: SiteQuality
SIO_000300: 4.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.699999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1165
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5173
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.743032696949748e-5
allele num: 36456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4990
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6692
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.067e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.083e0

QD
type: SiteQuality
SIO_000300: 3.49e0

DP
type: SiteQuality
SIO_000300: 1.110646e6

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.622e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.19e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.699999999999999e-3

GenotypeQuality
all individuals: 4623
bin: 2.75e1
variant carriers: 15

GenotypeQuality
all individuals: 1042
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variant carriers: 15

GenotypeQuality
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variant carriers: 30

GenotypeQuality
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variant carriers: 12

GenotypeQuality
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variant carriers: 27

GenotypeQuality
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variant carriers: 15

GenotypeQuality
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variant carriers: 20

GenotypeQuality
all individuals: 118
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variant carriers: 53

GenotypeQuality
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bin: 5.75e1
variant carriers: 25

GenotypeQuality
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variant carriers: 53

GenotypeQuality
all individuals: 278
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variant carriers: 47

GenotypeQuality
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variant carriers: 1988

GenotypeQuality
all individuals: 801
bin: 6.75e1
variant carriers: 37

GenotypeQuality
all individuals: 221
bin: 8.25e1
variant carriers: 62

European (Non-Finnish)
type: Population
allele count: 1681
allele frequency: 4.512267139099157e-2
allele num: 37254
num of homozygotes: 10

European (Finnish)
type: Population
allele count: 116
allele frequency: 4.961505560307956e-2
allele num: 2338
num of homozygotes: 2

South Asian
type: Population
allele count: 149
allele frequency: 1.249371121918497e-2
allele num: 11926
num of homozygotes: 3

African
type: Population
allele count: 97
allele frequency: 1.692844677137871e-2
allele num: 5730
num of homozygotes: 1

Other
type: Population
allele count: 13
allele frequency: 2.685950413223141e-2
allele num: 484
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 5.945303210463733e-4
allele num: 5046
num of homozygotes: 0

Latino
type: Population
allele count: 129
allele frequency: 1.928251121076233e-2
allele num: 6690
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.249e1

FS
type: SiteQuality
SIO_000300: 1.244e0

DP
type: SiteQuality
SIO_000300: 1.1414e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.42e0

GenotypeQuality
all individuals: 5880
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 491
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 698
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variant carriers: 0

GenotypeQuality
all individuals: 1009
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 241
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GenotypeQuality
all individuals: 8528
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 72
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variant carriers: 0

GenotypeQuality
all individuals: 177
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variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6738
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 5.896226415094339e-4
allele num: 5088
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37350
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5764
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11934
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.342e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.625e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.96e-1

DP
type: SiteQuality
SIO_000300: 1.124497e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.8e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

QD
type: SiteQuality
SIO_000300: 7.07e0

VQSLOD
type: SiteQuality
SIO_000300: -4.516e-1

GenotypeQuality
all individuals: 242
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2402
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 272
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GenotypeQuality
all individuals: 251
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GenotypeQuality
all individuals: 2040
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 5877
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GenotypeQuality
all individuals: 492
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variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6840
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5280
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5922
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.607289982791886e-5
allele num: 38354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12048
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.148436e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.461e0

MQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e-1

MQ
type: SiteQuality
SIO_000300: 5.833e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.54e-1

QD
type: SiteQuality
SIO_000300: 3.48e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2228
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GenotypeQuality
all individuals: 168
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5414
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6808
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12084
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5986
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.030078285949732e-4
allele num: 38832
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 506
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.33e-1

QD
type: SiteQuality
SIO_000300: 1.238e1

MQRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

FS
type: SiteQuality
SIO_000300: 8.75e0

DP
type: SiteQuality
SIO_000300: 1.159839e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.45e-1

GenotypeQuality
all individuals: 660
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2052
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 109
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GenotypeQuality
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GenotypeQuality
all individuals: 9733
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 687
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variant carriers: 1

GenotypeQuality
all individuals: 25585
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6804
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2432
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12110
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5982
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 7.380073800738007e-4
allele num: 5420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38888
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.8e-3

DP
type: SiteQuality
SIO_000300: 1.161684e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.34e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.162e0

QD
type: SiteQuality
SIO_000300: 1.275e1

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

GenotypeQuality
all individuals: 75
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 7.25e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 717
bin: 4.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
all individuals: 1012
bin: 4.75e1
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GenotypeQuality
all individuals: 917
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GenotypeQuality
all individuals: 25487
bin: 2.25e1
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GenotypeQuality
all individuals: 704
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GenotypeQuality
all individuals: 2124
bin: 3.75e1
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GenotypeQuality
all individuals: 2192
bin: 7.5e0
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GenotypeQuality
all individuals: 8966
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GenotypeQuality
all individuals: 4244
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5428
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5994
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2440
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 5.134260923140114e-5
allele num: 38954
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.03e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.79e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.7e-1

QD
type: SiteQuality
SIO_000300: 2.96e0

VQSLOD
type: SiteQuality
SIO_000300: -2.655e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.4e-3

DP
type: SiteQuality
SIO_000300: 1.160347e6

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.55388701603841e-5
allele num: 39156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6796
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12168
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5486
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2468
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.86e-1

FS
type: SiteQuality
SIO_000300: 9.69e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-3

DP
type: SiteQuality
SIO_000300: 1.165192e6

QD
type: SiteQuality
SIO_000300: 2.298e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.07e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.062e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.2e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.520923666431381e-5
allele num: 39668
num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
allele num: 6122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5532
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2518
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6762
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

MQ
type: SiteQuality
SIO_000300: 5.831e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-3

QD
type: SiteQuality
SIO_000300: 1.411e1

MQRankSum
type: SiteQuality
SIO_000300: -1.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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DP
type: SiteQuality
SIO_000300: 1.169019e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.061e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.89e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40044
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6754
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 1.249553730810425e-3
allele num: 5602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12202
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6148
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.756e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.664e0

QD
type: SiteQuality
SIO_000300: 1.121e1

DP
type: SiteQuality
SIO_000300: 1.171926e6

VQSLOD
type: SiteQuality
SIO_000300: 2.96e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.784439685938615e-4
allele num: 5604
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.488538255433165e-4
allele num: 6718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 504
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.243593902043464e-4
allele num: 6166
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 7.517289766462864e-5
allele num: 39908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.199409642505739e-5
allele num: 12196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2506
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.61e-1

QD
type: SiteQuality
SIO_000300: 9.4e0

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.23e-1

DP
type: SiteQuality
SIO_000300: 1.178982e6

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 4.807e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 9
allele frequency: 2.230593833647269e-4
allele num: 40348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2540
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African
type: Population
allele count: 4
allele frequency: 6.459948320413437e-4
allele num: 6192
num of homozygotes: 0

Latino
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allele count: 3
allele frequency: 4.443127962085308e-4
allele num: 6752
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 2
allele frequency: 1.62999185004075e-4
allele num: 12270
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.96078431372549e-3
allele num: 510
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FS
type: SiteQuality
SIO_000300: 2.423e0

VQSLOD
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
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MQRankSum
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InbreedingCoeff
type: SiteQuality
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DP
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6762
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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Other
type: Population
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allele frequency: 0.0e0
allele num: 508
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East Asian
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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ClippingRankSum
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DP
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MQRankSum
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
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Other
type: Population
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African
type: Population
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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MQ
type: SiteQuality
SIO_000300: 5.147e1

MQRankSum
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VQSLOD
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BaseQRankSum
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QD
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 74
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
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African
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allele num: 6334
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Latino
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allele count: 0
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South Asian
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InbreedingCoeff
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ClippingRankSum
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QD
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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DP
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MQRankSum
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ReadPosRankSum
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 545
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12003
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 972
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 508
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.71291538198013e-4
allele num: 5838
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12358
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6686
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41336
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.28e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.19906e6

GenotypeQuality
all individuals: 109
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2582
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.945525291828794e-3
allele num: 514
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.196564e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.41e-1

QD
type: SiteQuality
SIO_000300: 1.734e1

GenotypeQuality
all individuals: 2179
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10907
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variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6416
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 4.018646519852114e-4
allele num: 12442
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.405696689761355e-5
allele num: 41568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

FS
type: SiteQuality
SIO_000300: 5.24e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

QD
type: SiteQuality
SIO_000300: 1.133e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.197526e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.79e-1

GenotypeQuality
all individuals: 10907
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2179
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.607458607940846e-4
allele num: 12442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5884
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2600
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.7e-1

QD
type: SiteQuality
SIO_000300: 1.133e1

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.79e-1

DP
type: SiteQuality
SIO_000300: 1.197526e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

FS
type: SiteQuality
SIO_000300: 5.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 5877
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 929
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5844
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2580
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.179e0

VQSLOD
type: SiteQuality
SIO_000300: -1.423e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

DP
type: SiteQuality
SIO_000300: 1.194571e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.666e0

QD
type: SiteQuality
SIO_000300: 5.18e0

GenotypeQuality
all individuals: 275
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2161
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24809
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5876
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 281
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1037
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
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variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6446
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5848
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6270
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.058017727639001e-5
allele num: 12410
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e0

QD
type: SiteQuality
SIO_000300: 1.218e1

DP
type: SiteQuality
SIO_000300: 1.197377e6

FS
type: SiteQuality
SIO_000300: 5.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 633
bin: 1.25e1
variant carriers: 73

GenotypeQuality
all individuals: 1884
bin: 7.5e0
variant carriers: 46

GenotypeQuality
all individuals: 413
bin: 5.75e1
variant carriers: 119

GenotypeQuality
all individuals: 354
bin: 9.25e1
variant carriers: 282

GenotypeQuality
all individuals: 920
bin: 5.25e1
variant carriers: 198

GenotypeQuality
all individuals: 320
bin: 7.25e1
variant carriers: 151

GenotypeQuality
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bin: 2.25e1
variant carriers: 119

GenotypeQuality
all individuals: 2384
bin: 2.75e1
variant carriers: 87

GenotypeQuality
all individuals: 1217
bin: 2.5e0
variant carriers: 35

GenotypeQuality
all individuals: 863
bin: 6.75e1
variant carriers: 145

GenotypeQuality
all individuals: 1307
bin: 3.75e1
variant carriers: 154

GenotypeQuality
all individuals: 883
bin: 4.75e1
variant carriers: 181

GenotypeQuality
all individuals: 357
bin: 7.75e1
variant carriers: 182

GenotypeQuality
all individuals: 15705
bin: 9.75e1
variant carriers: 11665

GenotypeQuality
all individuals: 249
bin: 8.75e1
variant carriers: 204

Latino
type: Population
allele count: 967
allele frequency: 1.494590417310665e-1
allele num: 6470
num of homozygotes: 44

European (Non-Finnish)
type: Population
allele count: 8552
allele frequency: 1.94637898857481e-1
allele num: 43938
num of homozygotes: 622

Other
type: Population
allele count: 100
allele frequency: 1.858736059479554e-1
allele num: 538
num of homozygotes: 7

European (Finnish)
type: Population
allele count: 678
allele frequency: 2.344398340248963e-1
allele num: 2892
num of homozygotes: 49

African
type: Population
allele count: 236
allele frequency: 3.618521925789635e-2
allele num: 6522
num of homozygotes: 5

East Asian
type: Population
allele count: 1045
allele frequency: 1.724422442244224e-1
allele num: 6060
num of homozygotes: 63

South Asian
type: Population
allele count: 2316
allele frequency: 1.793958171959721e-1
allele num: 12910
num of homozygotes: 180

FS
type: SiteQuality
SIO_000300: 5.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.27e-2

DP
type: SiteQuality
SIO_000300: 1.467727e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e-1

QD
type: SiteQuality
SIO_000300: 1.505e1

MQRankSum
type: SiteQuality
SIO_000300: 6.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.73e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 413
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8649
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 2.5e0
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GenotypeQuality
all individuals: 604
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variant carriers: 0

GenotypeQuality
all individuals: 1307
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 320
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 354
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GenotypeQuality
all individuals: 249
bin: 8.75e1
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GenotypeQuality
all individuals: 920
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 863
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15705
bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 1
allele frequency: 7.745933384972889e-5
allele num: 12910
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6060
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.533272002453235e-4
allele num: 6522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43938
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.505e1

VQSLOD
type: SiteQuality
SIO_000300: 4.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.84e-1

DP
type: SiteQuality
SIO_000300: 1.467727e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

FS
type: SiteQuality
SIO_000300: 5.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.27e-2

GenotypeQuality
all individuals: 814
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 828
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 802
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GenotypeQuality
all individuals: 334
bin: 2.5e0
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GenotypeQuality
all individuals: 3304
bin: 7.5e0
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GenotypeQuality
all individuals: 2725
bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 1519
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GenotypeQuality
all individuals: 28396
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GenotypeQuality
all individuals: 368
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GenotypeQuality
all individuals: 3032
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
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GenotypeQuality
all individuals: 933
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.685140432844638e-5
allele num: 37242
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6164
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5212
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2196
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.16e-1

QD
type: SiteQuality
SIO_000300: 9.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-2

DP
type: SiteQuality
SIO_000300: 1.120792e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

GenotypeQuality
all individuals: 3342
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2731
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4994
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 8.092360811394044e-5
allele num: 37072
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.457374830852504e-5
allele num: 11824
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.627604166666667e-4
allele num: 6144
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5214
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.299999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.37e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

MQRankSum
type: SiteQuality
SIO_000300: 7.78e-1

QD
type: SiteQuality
SIO_000300: 1.187e1

FS
type: SiteQuality
SIO_000300: 2.395e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.37e-1

DP
type: SiteQuality
SIO_000300: 1.11696e6

GenotypeQuality
all individuals: 884
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9049
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 815
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28879
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2154
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.623376623376623e-4
allele num: 6160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11812
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5004
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5192
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.34e-1

QD
type: SiteQuality
SIO_000300: 4.95e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

DP
type: SiteQuality
SIO_000300: 1.11769e6

GenotypeQuality
all individuals: 3349
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 8.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1445
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9049
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 4.25e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6160
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2154
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.079214331966328e-4
allele num: 37064
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5004
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5192
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.95e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.11769e6

FS
type: SiteQuality
SIO_000300: 6.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.69e-1

GenotypeQuality
all individuals: 29072
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3454
bin: 7.5e0
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GenotypeQuality
all individuals: 691
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 499
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 60
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 314
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GenotypeQuality
all individuals: 817
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variant carriers: 0

GenotypeQuality
all individuals: 103
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GenotypeQuality
all individuals: 153
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GenotypeQuality
all individuals: 2991
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variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5634
bin: 9.75e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.726578689060966e-5
allele num: 36676
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2134
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5146
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.044989775051125e-4
allele num: 4890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6120
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.49762066621346e-5
allele num: 11768
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.01e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.05e-1

QD
type: SiteQuality
SIO_000300: 1.26e1

DP
type: SiteQuality
SIO_000300: 1.1125e6

VQSLOD
type: SiteQuality
SIO_000300: 4.53e-1

FS
type: SiteQuality
SIO_000300: 2.976e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.099e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.74e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

GenotypeQuality
all individuals: 916
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28837
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3014
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7905
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variant carriers: 0

GenotypeQuality
all individuals: 501
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GenotypeQuality
all individuals: 60
bin: 8.75e1
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GenotypeQuality
all individuals: 623
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GenotypeQuality
all individuals: 2647
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GenotypeQuality
all individuals: 1861
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variant carriers: 0

GenotypeQuality
all individuals: 155
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GenotypeQuality
all individuals: 103
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5636
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 239
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.536793580331228e-5
allele num: 11714
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.642036124794746e-4
allele num: 6090
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2092
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 2.252252252252252e-3
allele num: 444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5080
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.064409578860446e-4
allele num: 4844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 8.250825082508251e-5
allele num: 36360
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.02e-2

DP
type: SiteQuality
SIO_000300: 1.10531e6

QD
type: SiteQuality
SIO_000300: 1.234e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.17e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.6e-2

GenotypeQuality
all individuals: 283
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2982
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8255
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 841
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3591
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 60
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GenotypeQuality
all individuals: 2620
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 494
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GenotypeQuality
all individuals: 29110
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
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GenotypeQuality
all individuals: 912
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 153
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6078
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.513895015438906e-5
allele num: 36272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2094
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.06782464846981e-4
allele num: 4836
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5086
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11712
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.64e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.56e-1

FS
type: SiteQuality
SIO_000300: 2.146e0

VQSLOD
type: SiteQuality
SIO_000300: -1.155e0

DP
type: SiteQuality
SIO_000300: 1.105458e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-2

QD
type: SiteQuality
SIO_000300: 6.13e0

GenotypeQuality
all individuals: 153
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2952
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1404
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29473
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 471
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GenotypeQuality
all individuals: 2561
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GenotypeQuality
all individuals: 1333
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 5.25e1
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GenotypeQuality
all individuals: 60
bin: 8.75e1
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GenotypeQuality
all individuals: 8714
bin: 6.25e1
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GenotypeQuality
all individuals: 656
bin: 4.75e1
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GenotypeQuality
all individuals: 5637
bin: 9.75e1
variant carriers: 6

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 7.877116975187081e-4
allele num: 5078
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.706193482340898e-4
allele num: 11722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4834
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.016e0

FS
type: SiteQuality
SIO_000300: 2.0176e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.634e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-2

QD
type: SiteQuality
SIO_000300: 1.178e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.02e-2

DP
type: SiteQuality
SIO_000300: 1.105877e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e-1

GenotypeQuality
all individuals: 5635
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1297
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 58
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variant carriers: 0

GenotypeQuality
all individuals: 456
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variant carriers: 0

GenotypeQuality
all individuals: 2954
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 719
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variant carriers: 0

GenotypeQuality
all individuals: 29565
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3672
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variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8504
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.568980291345329e-5
allele num: 11670
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6076
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35960
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 444
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 4.217629692113032e-4
allele num: 4742
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.982553528945282e-4
allele num: 5044
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2044
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.05e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.7e-2

FS
type: SiteQuality
SIO_000300: 2.703e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.66e0

DP
type: SiteQuality
SIO_000300: 1.10175e6

GenotypeQuality
all individuals: 608
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1265
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3714
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2491
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1406
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8592
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29758
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5634
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 58
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 4.251700680272109e-4
allele num: 4704
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.588153115395362e-5
allele num: 35790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2040
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5056
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6084
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11652
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.307e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.0e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

QD
type: SiteQuality
SIO_000300: 7.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.04e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

VQSLOD
type: SiteQuality
SIO_000300: -7.01e-1

DP
type: SiteQuality
SIO_000300: 1.099579e6

GenotypeQuality
all individuals: 149
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1068
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1552
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5630
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 2.5e0
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2393
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1890
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.707767328456984e-5
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34282
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5986
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4852
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.18e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.46e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

FS
type: SiteQuality
SIO_000300: 7.169e0

DP
type: SiteQuality
SIO_000300: 1.074676e6

QD
type: SiteQuality
SIO_000300: 9.130000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.25e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.667e-1

GenotypeQuality
all individuals: 1303
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4843
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5631
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 142
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 222
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variant carriers: 0

GenotypeQuality
all individuals: 946
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 178
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variant carriers: 0

GenotypeQuality
all individuals: 284
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variant carriers: 0

GenotypeQuality
all individuals: 424
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variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.974596942114343e-5
allele num: 33618
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4222
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5946
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 420
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.193e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.464e0

QD
type: SiteQuality
SIO_000300: 1.424e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

DP
type: SiteQuality
SIO_000300: 1.063204e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.308e0

VQSLOD
type: SiteQuality
SIO_000300: -3.101e0

MQ
type: SiteQuality
SIO_000300: 5.855e1

MQRankSum
type: SiteQuality
SIO_000300: 1.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.21e-2

GenotypeQuality
all individuals: 141
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2999
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variant carriers: 0

GenotypeQuality
all individuals: 670
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variant carriers: 0

GenotypeQuality
all individuals: 1368
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variant carriers: 0

GenotypeQuality
all individuals: 201
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GenotypeQuality
all individuals: 173
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variant carriers: 0

GenotypeQuality
all individuals: 277
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GenotypeQuality
all individuals: 102
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GenotypeQuality
all individuals: 31312
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variant carriers: 0

GenotypeQuality
all individuals: 6980
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variant carriers: 0

GenotypeQuality
all individuals: 387
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GenotypeQuality
all individuals: 58
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GenotypeQuality
all individuals: 240
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variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4144
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33106
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 414
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.690331304935767e-4
allele num: 5916
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1812
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4758
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.629999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.05258e6

MQ
type: SiteQuality
SIO_000300: 5.966e1

FS
type: SiteQuality
SIO_000300: 1.94e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e0

MQRankSum
type: SiteQuality
SIO_000300: 4.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.29e-2

QD
type: SiteQuality
SIO_000300: 8.890000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.76e0

GenotypeQuality
all individuals: 437
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5631
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 202
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variant carriers: 0

GenotypeQuality
all individuals: 1586
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variant carriers: 0

GenotypeQuality
all individuals: 5428
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GenotypeQuality
all individuals: 6431
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variant carriers: 0

GenotypeQuality
all individuals: 3046
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
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GenotypeQuality
all individuals: 2368
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variant carriers: 0

GenotypeQuality
all individuals: 58
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variant carriers: 0

GenotypeQuality
all individuals: 103
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variant carriers: 1

GenotypeQuality
all individuals: 173
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4710
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.464268112370626e-4
allele num: 4058
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1780
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11264
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

DP
type: SiteQuality
SIO_000300: 1.046762e6

VQSLOD
type: SiteQuality
SIO_000300: -7.363e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.001e0

QD
type: SiteQuality
SIO_000300: 6.3e0

FS
type: SiteQuality
SIO_000300: 4.624e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.34e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

GenotypeQuality
all individuals: 143
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2026
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1270
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3201
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2451
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30247
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 2.5e0
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GenotypeQuality
all individuals: 102
bin: 9.25e1
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GenotypeQuality
all individuals: 333
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 137
bin: 8.25e1
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GenotypeQuality
all individuals: 280
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 7.75e1
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GenotypeQuality
all individuals: 5631
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 276
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10990
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1632
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.730748225013654e-4
allele num: 3662
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30920
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5638
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.67e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.026e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

DP
type: SiteQuality
SIO_000300: 1.007248e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.18e0

GenotypeQuality
all individuals: 3361
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2633
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2498
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variant carriers: 0

GenotypeQuality
all individuals: 1703
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variant carriers: 0

GenotypeQuality
all individuals: 950
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GenotypeQuality
all individuals: 282
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GenotypeQuality
all individuals: 489
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 9.25e1
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GenotypeQuality
all individuals: 5649
bin: 9.75e1
variant carriers: 21

GenotypeQuality
all individuals: 56
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
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variant carriers: 1

GenotypeQuality
all individuals: 485
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4354
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1466
num of homozygotes: 0

Latino
type: Population
allele count: 16
allele frequency: 4.790419161676647e-3
allele num: 3340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29316
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10780
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.7611e5

VQSLOD
type: SiteQuality
SIO_000300: 8.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.92e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.4e-2

QD
type: SiteQuality
SIO_000300: 1.334e1

FS
type: SiteQuality
SIO_000300: 4.7e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2627
bin: 3.25e1
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GenotypeQuality
all individuals: 5629
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 28541
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 7.75e1
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GenotypeQuality
all individuals: 715
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 102
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GenotypeQuality
all individuals: 1878
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.50754121360926e-5
allele num: 28510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3178
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10654
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

DP
type: SiteQuality
SIO_000300: 9.66193e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.06e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.52e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.552e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

QD
type: SiteQuality
SIO_000300: 4.22e0

GenotypeQuality
all individuals: 5629
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 101
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 5.75e1
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GenotypeQuality
all individuals: 129
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 2.5e0
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GenotypeQuality
all individuals: 2597
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9445
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3363
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3254
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.500175008750438e-5
allele num: 28570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10676
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3214
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 362
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.3071e1

VQSLOD
type: SiteQuality
SIO_000300: -7.453e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

DP
type: SiteQuality
SIO_000300: 9.64697e5

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.02e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

QD
type: SiteQuality
SIO_000300: 1.068e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

GenotypeQuality
all individuals: 883
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2638
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9592
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29142
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1774
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5628
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1858
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.50754121360926e-5
allele num: 28510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1428
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10686
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4262
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.246e0

QD
type: SiteQuality
SIO_000300: 2.114e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.01e-2

DP
type: SiteQuality
SIO_000300: 9.61179e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQRankSum
type: SiteQuality
SIO_000300: -4.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.926e0

GenotypeQuality
all individuals: 727
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2764
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26211
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5627
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 160
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2106
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3472
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26974
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 354
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5258
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.567546880979717e-5
allele num: 10452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4122
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1254
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.33124e5

VQSLOD
type: SiteQuality
SIO_000300: -3.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.37e-2

FS
type: SiteQuality
SIO_000300: 2.1172e1

QD
type: SiteQuality
SIO_000300: 1.152e1

MQ
type: SiteQuality
SIO_000300: 5.954e1

GenotypeQuality
all individuals: 12946
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23637
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2880
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1471
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5628
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1090
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3982
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1166
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 336
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.8e1

FS
type: SiteQuality
SIO_000300: 5.961e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -8.226e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.63e-2

DP
type: SiteQuality
SIO_000300: 9.09856e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.41e-1