15-60760484-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60760484
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60760484
    reference: chr 15
allele count: 2
allele frequency: 1.648858989579211e-5
allele num: 121296
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.294-123G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.184G>A
  hgvsp: ENSP00000453783.1:p.Val62Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.184G>A
  hgvsp: ENSP00000452618.1:p.Val62Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.184G>A
  hgvsp: ENSP00000452714.1:p.Val62Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.184G>A
  hgvsp: ENSP00000454162.1:p.Val62Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.147-123G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.419-123G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.111-123G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.184G>A
  hgvsp: ENSP00000453041.1:p.Val62Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.184G>A
  hgvsp: ENSP00000261520.4:p.Val62Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-105-123G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.147-123G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+7778G>A
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44482
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Val62Ile
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/15-60760484-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60760484
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60760484
    reference: chr 15
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.184G>T
  hgvsp: ENSP00000452714.1:p.Val62Leu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.184G>T
  hgvsp: ENSP00000452618.1:p.Val62Leu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.419-123G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-105-123G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.111-123G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.184G>T
  hgvsp: ENSP00000453041.1:p.Val62Leu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+7778G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.184G>T
  hgvsp: ENSP00000261520.4:p.Val62Leu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.184G>T
  hgvsp: ENSP00000453783.1:p.Val62Leu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.184G>T
  hgvsp: ENSP00000454162.1:p.Val62Leu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.147-123G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.294-123G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.147-123G>T
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3356
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10037
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val62Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD

15-60760490-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60760490
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60760490
    reference: chr 15
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.178A>T
  hgvsp: ENSP00000453783.1:p.Ser60Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.419-129A>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-105-129A>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.178A>T
  hgvsp: ENSP00000453041.1:p.Ser60Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+7772A>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.178A>T
  hgvsp: ENSP00000452714.1:p.Ser60Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.178A>T
  hgvsp: ENSP00000452618.1:p.Ser60Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.178A>T
  hgvsp: ENSP00000454162.1:p.Ser60Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.147-129A>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.178A>T
  hgvsp: ENSP00000261520.4:p.Ser60Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.111-129A>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.147-129A>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.294-129A>T
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10027
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44439
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser60Cys
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

15-60760495-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60760495
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60760495
    reference: chr 15
allele count: 1
allele frequency: 8.252459232851389e-6
allele num: 121176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.173C>T
  hgvsp: ENSP00000453041.1:p.Ser58Leu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.173C>T
  hgvsp: ENSP00000454162.1:p.Ser58Leu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.173C>T
  hgvsp: ENSP00000452618.1:p.Ser58Leu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.419-134C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.147-134C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+7767C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.173C>T
  hgvsp: ENSP00000452714.1:p.Ser58Leu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.147-134C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.294-134C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-105-134C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.173C>T
  hgvsp: ENSP00000261520.4:p.Ser58Leu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.111-134C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.173C>T
  hgvsp: ENSP00000453783.1:p.Ser58Leu
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10023
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser58Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

15-60760513-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60760513
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60760513
    reference: chr 15
allele count: 2
allele frequency: 1.66008167601846e-5
allele num: 120476
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.155G>A
  hgvsp: ENSP00000454162.1:p.Gly52Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.155G>A
  hgvsp: ENSP00000453783.1:p.Gly52Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.155G>A
  hgvsp: ENSP00000452714.1:p.Gly52Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.155G>A
  hgvsp: ENSP00000452618.1:p.Gly52Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.147-152G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.155G>A
  hgvsp: ENSP00000261520.4:p.Gly52Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-105-152G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+7749G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.147-152G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.155G>A
  hgvsp: ENSP00000453041.1:p.Gly52Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.111-152G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.294-152G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.419-152G>A
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3371
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly52Glu
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

15-60760519-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60760519
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60760519
    reference: chr 15
allele count: 3
allele frequency: 2.503421342501419e-5
allele num: 119836
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.149G>A
  hgvsp: ENSP00000453783.1:p.Arg50His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.149G>A
  hgvsp: ENSP00000452714.1:p.Arg50His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+7743G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.149G>A
  hgvsp: ENSP00000452618.1:p.Arg50His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.149G>A
  hgvsp: ENSP00000454162.1:p.Arg50His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.149G>A
  hgvsp: ENSP00000261520.4:p.Arg50His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.111-158G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.419-158G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-105-158G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.294-158G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.149G>A
  hgvsp: ENSP00000453041.1:p.Arg50His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.147-158G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.147-158G>A
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9728
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42962
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg50His
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD

15-60760520-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60760520
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60760520
    reference: chr 15
allele count: 1
allele frequency: 8.350033400133601e-6
allele num: 119760
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.147-159C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.148C>T
  hgvsp: ENSP00000452618.1:p.Arg50Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.148C>T
  hgvsp: ENSP00000261520.4:p.Arg50Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.148C>T
  hgvsp: ENSP00000453783.1:p.Arg50Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+7742C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.148C>T
  hgvsp: ENSP00000453041.1:p.Arg50Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.148C>T
  hgvsp: ENSP00000454162.1:p.Arg50Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.294-159C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.148C>T
  hgvsp: ENSP00000452714.1:p.Arg50Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-105-159C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.419-159C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.111-159C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.147-159C>T
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3329
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42843
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg50Cys
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum

15-60760521-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60760521
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60760521
    reference: chr 15
allele count: 1
allele frequency: 8.362182864214875e-6
allele num: 119586
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.147A>G
  hgvsp: ENST00000561114.1:c.147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-105-160A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.147-160A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.147A>G
  hgvsp: ENST00000261520.4:c.147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.419-160A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.147A>G
  hgvsp: ENST00000560520.1:c.147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.147-160A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.294-160A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.147A>G
  hgvsp: ENST00000558512.1:c.147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.147A>G
  hgvsp: ENST00000560072.1:c.147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.111-160A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.147A>G
  hgvsp: ENST00000560406.1:c.147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+7741A>G
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.147A>G
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum

15-60760524-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60760524
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60760524
    reference: chr 15
allele count: 2
allele frequency: 1.677627164139042e-5
allele num: 119216
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.147-3C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+7738C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.147-3C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.147-3C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.147-3C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.147-3C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.147-3C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.147-163C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.111-163C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.419-163C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-105-163C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.147-163C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.294-163C>G
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.147-3C>G
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/15-60760533-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60760533
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60760533
    reference: chr 15
allele count: 1
allele frequency: 8.477737461426295e-6
allele num: 117956
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.147-172T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.147-12T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+7729T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.147-12T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.419-172T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-105-172T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.294-172T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.111-172T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.147-172T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.147-12T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.147-12T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.147-12T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.147-12T>G
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40602
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9077
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

15-60760538-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60760538
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60760538
    reference: chr 15
allele count: 44
allele frequency: 3.749339604955945e-4
allele num: 117354
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-105-177T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.147-17T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.147-17T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.147-17T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.294-177T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.147-177T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.111-177T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.147-17T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.147-177T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.419-177T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.147-17T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+7724T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.147-17T>C
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 39544
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
num of homozygotes: 1
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

15-60760547-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60760547
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60760547
    reference: chr 15
allele count: 1
allele frequency: 8.589146754161442e-6
allele num: 116426
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.147-186T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.147-186T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.147-26T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.147-26T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.147-26T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-105-186T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.147-26T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.111-186T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.419-186T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.294-186T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+7715T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.147-26T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.147-26T>C
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4505
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD

15-60760550-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60760550
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60760550
    reference: chr 15
allele count: 1
allele frequency: 8.617866560954171e-6
allele num: 116038
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.147-189A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.147-29A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.147-29A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.147-189A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+7712A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-105-189A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.294-189A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.147-29A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.419-189A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.147-29A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.111-189A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.147-29A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.147-29A>G
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4659
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8329
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ

15-60760551-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60760551
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60760551
    reference: chr 15
allele count: 2
allele frequency: 1.725923369002416e-5
allele num: 115880
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+7711C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.111-190C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.147-30C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.147-30C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.147-30C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.147-30C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.147-30C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-105-190C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.147-190C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.147-190C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.419-190C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.147-30C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.294-190C>T
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4687
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD

15-60760556-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60760556
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60760556
    reference: chr 15
allele count: 1
allele frequency: 8.688097306689835e-6
allele num: 115100
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.147-195A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.419-195A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.147-35A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.147-195A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.294-195A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.147-35A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-105-195A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.147-35A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+7706A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.111-195A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.147-35A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.147-35A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.147-35A>G
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3544
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4631
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

15-60760566-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60760566
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60760566
    reference: chr 15
allele count: 1
allele frequency: 8.793682618406936e-6
allele num: 113718
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.111-205T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.147-205T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+7696T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.147-45T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.147-45T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-105-205T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.147-45T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.294-205T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.147-45T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.147-205T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.419-205T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.147-45T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.147-45T>C
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5375
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7802
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

15-60760567-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60760567
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60760567
    reference: chr 15
allele count: 1
allele frequency: 8.80266192496611e-6
allele num: 113602
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.147-46C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.147-46C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.147-206C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.419-206C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.147-46C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.147-46C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.111-206C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.294-206C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+7695C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.147-46C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.147-46C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-105-206C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.147-206C>T
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7786
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3035
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2866
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5363
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

15-60760568-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60760568
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60760568
    reference: chr 15
allele count: 1
allele frequency: 8.824256115209487e-6
allele num: 113324
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.147-47T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.111-207T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.147-47T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.294-207T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.147-207T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.419-207T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.147-47T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+7694T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-105-207T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.147-47T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.147-47T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.147-47T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.147-207T>C
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5351
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4043
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum

15-60768211-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768211
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768211
    reference: chr 15
allele count: 4
allele frequency: 3.865630677645058e-5
allele num: 103476
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.146+51G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.146+51G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.146+51G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.418+51G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.293+51G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.146+51G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.146+51G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.146+51G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.146+51G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-106+51G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+51G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.110+51G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.146+51G>A
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15809
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5006
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9895
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7480
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

15-60768219-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768219
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768219
    reference: chr 15
allele count: 29
allele frequency: 2.797499614137984e-4
allele num: 103664
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.146+43G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.418+43G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.146+43G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-106+43G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.146+43G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.146+43G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.110+43G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.146+43G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.146+43G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.146+43G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.146+43G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+43G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.293+43G>A
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7420
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11376
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16220
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5290
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14393
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum

15-60768225-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768225
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768225
    reference: chr 15
allele count: 2
allele frequency: 1.902659918566155e-5
allele num: 105116
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.146+37A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.146+37A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.146+37A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+37A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.293+37A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.110+37A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.146+37A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.146+37A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-106+37A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.146+37A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.146+37A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.418+37A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.146+37A>G
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7373
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20632
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14337
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5991
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6610
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum

15-60768234-GAAAT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768234
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768230
    reference: chr 15
allele count: 1
allele frequency: 9.348939830223253e-6
allele num: 106964
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.146+24_146+27delATTT
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.146+24_146+27delATTT
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.146+24_146+27delATTT
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.146+24_146+27delATTT
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+24_146+27delATTT
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-106+24_-106+27delATTT
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.146+24_146+27delATTT
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.110+24_110+27delATTT
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.146+24_146+27delATTT
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.418+24_418+27delATTT
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.293+24_293+27delATTT
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.146+24_146+27delATTT
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.146+24_146+27delATTT
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8829
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: GAAAT
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

15-60768237-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768237
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768237
    reference: chr 15
allele count: 3
allele frequency: 2.772130844575864e-5
allele num: 108220
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.146+25T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.146+25T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.146+25T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+25T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.146+25T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.146+25T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.418+25T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.146+25T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.146+25T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-106+25T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.110+25T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.293+25T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.146+25T>C
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31902
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

15-60768242-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768242
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768242
    reference: chr 15
allele count: 1
allele frequency: 9.057150620414817e-6
allele num: 110410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.146+20A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.146+20A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.110+20A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.146+20A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.418+20A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.146+20A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.146+20A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.146+20A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+20A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.146+20A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-106+20A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.146+20A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.293+20A>G
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8370
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/15-60768252-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768252
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768252
    reference: chr 15
allele count: 1
allele frequency: 8.664009703690868e-6
allele num: 115420
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.146+10T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.418+10T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.146+10T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.146+10T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.146+10T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.110+10T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.146+10T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.146+10T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-106+10T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.146+10T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+10T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.146+10T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.293+10T>G
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/15-60768254-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768254
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768254
    reference: chr 15
allele count: 1
allele frequency: 8.615045315138358e-6
allele num: 116076
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.146+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.293+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.146+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.146+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.146+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.146+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-106+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.146+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.146+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.146+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.418+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.110+8G>T
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.146+8G>T
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: African
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

15-60768255-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768255
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768255
    reference: chr 15
allele count: 5
allele frequency: 4.290887870518168e-5
allele num: 116526
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.146+7T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-106+7T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.418+7T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.293+7T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.146+7T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.146+7T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.146+7T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.146+7T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.110+7T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.146+7T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.146+7T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.146+7T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.146+7T>C
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9908
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.146+7T>C
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

15-60768263-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768263
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768263
    reference: chr 15
allele count: 1
allele frequency: 8.439245868989148e-6
allele num: 118494
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.145A>G
  hgvsp: ENSP00000453041.1:p.Arg49Gly
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.292A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.145A>G
  hgvsp: ENSP00000452714.1:p.Arg49Gly
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.145A>G
  hgvsp: ENSP00000453303.1:p.Arg49Gly
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.145A>G
  hgvsp: ENSP00000453820.1:p.Arg49Gly
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.109A>G
  hgvsp: ENSP00000452713.1:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.145A>G
  hgvsp: ENSP00000453593.1:p.Arg49Gly
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.145A>G
  hgvsp: ENSP00000453783.1:p.Arg49Gly
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.417A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-107A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.145A>G
  hgvsp: ENSP00000261520.4:p.Arg49Gly
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.145A>G
  hgvsp: ENSP00000452618.1:p.Arg49Gly
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.145A>G
  hgvsp: ENSP00000454162.1:p.Arg49Gly
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10395
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg49Gly
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-60768266-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768266
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768266
    reference: chr 15
allele count: 1
allele frequency: 8.405339071378139e-6
allele num: 118972
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.142A>G
  hgvsp: ENSP00000454162.1:p.Asn48Asp
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.142A>G
  hgvsp: ENSP00000453593.1:p.Asn48Asp
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.142A>G
  hgvsp: ENSP00000453041.1:p.Asn48Asp
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.142A>G
  hgvsp: ENSP00000453783.1:p.Asn48Asp
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.142A>G
  hgvsp: ENSP00000261520.4:p.Asn48Asp
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.106A>G
  hgvsp: ENSP00000452713.1:p.Asn36Asp
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-110A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.142A>G
  hgvsp: ENSP00000452714.1:p.Asn48Asp
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.142A>G
  hgvsp: ENSP00000453303.1:p.Asn48Asp
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.289A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.142A>G
  hgvsp: ENSP00000452618.1:p.Asn48Asp
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.142A>G
  hgvsp: ENSP00000453820.1:p.Asn48Asp
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.414A>G
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42576
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10531
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn48Asp
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: T
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-60768268-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768268
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768268
    reference: chr 15
allele count: 2
allele frequency: 1.677233236053806e-5
allele num: 119244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.140C>T
  hgvsp: ENSP00000452618.1:p.Ser47Phe
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.140C>T
  hgvsp: ENSP00000453783.1:p.Ser47Phe
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-112C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.140C>T
  hgvsp: ENSP00000261520.4:p.Ser47Phe
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.140C>T
  hgvsp: ENSP00000453820.1:p.Ser47Phe
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.140C>T
  hgvsp: ENSP00000453593.1:p.Ser47Phe
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.140C>T
  hgvsp: ENSP00000453041.1:p.Ser47Phe
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.140C>T
  hgvsp: ENSP00000452714.1:p.Ser47Phe
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.140C>T
  hgvsp: ENSP00000454162.1:p.Ser47Phe
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.287C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.104C>T
  hgvsp: ENSP00000452713.1:p.Ser35Phe
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.140C>T
  hgvsp: ENSP00000453303.1:p.Ser47Phe
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.412C>T
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42578
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser47Phe
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

15-60768275-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768275
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768275
    reference: chr 15
allele count: 3
allele frequency: 2.50300360432519e-5
allele num: 119856
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.133G>A
  hgvsp: ENSP00000453820.1:p.Val45Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.133G>A
  hgvsp: ENSP00000453593.1:p.Val45Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.133G>A
  hgvsp: ENSP00000453303.1:p.Val45Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.405G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.133G>A
  hgvsp: ENSP00000453783.1:p.Val45Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-119G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.280G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.97G>A
  hgvsp: ENSP00000452713.1:p.Val33Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.133G>A
  hgvsp: ENSP00000261520.4:p.Val45Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.133G>A
  hgvsp: ENSP00000452714.1:p.Val45Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.133G>A
  hgvsp: ENSP00000454162.1:p.Val45Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.133G>A
  hgvsp: ENSP00000452618.1:p.Val45Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.133G>A
  hgvsp: ENSP00000453041.1:p.Val45Ile
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2334
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val45Ile
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/15-60768276-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768276
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768276
    reference: chr 15
allele count: 2
allele frequency: 1.667695078631823e-5
allele num: 119926
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.132T>G
  hgvsp: ENST00000560406.1:c.132T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.132T>G
  hgvsp: ENST00000560072.1:c.132T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.96T>G
  hgvsp: ENST00000561446.1:c.96T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-120T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.132T>G
  hgvsp: ENST00000261520.4:c.132T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.132T>G
  hgvsp: ENST00000560668.1:c.132T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.132T>G
  hgvsp: ENST00000561114.1:c.132T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.132T>G
  hgvsp: ENST00000560895.1:c.132T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.132T>G
  hgvsp: ENST00000560520.1:c.132T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.132T>G
  hgvsp: ENST00000558181.1:c.132T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.404T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.132T>G
  hgvsp: ENST00000558512.1:c.132T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.279T>G
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg44Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

15-60768277-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768277
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768277
    reference: chr 15
allele count: 5
allele frequency: 4.167569640088686e-5
allele num: 119974
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.131G>A
  hgvsp: ENSP00000452618.1:p.Arg44His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.131G>A
  hgvsp: ENSP00000453783.1:p.Arg44His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.131G>A
  hgvsp: ENSP00000452714.1:p.Arg44His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.95G>A
  hgvsp: ENSP00000452713.1:p.Arg32His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.403G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.131G>A
  hgvsp: ENSP00000453303.1:p.Arg44His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-121G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.131G>A
  hgvsp: ENSP00000261520.4:p.Arg44His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.131G>A
  hgvsp: ENSP00000453593.1:p.Arg44His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.131G>A
  hgvsp: ENSP00000453820.1:p.Arg44His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.131G>A
  hgvsp: ENSP00000453041.1:p.Arg44His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.278G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.131G>A
  hgvsp: ENSP00000454162.1:p.Arg44His
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10964
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg44His
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

15-60768278-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768278
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768278
    reference: chr 15
allele count: 5
allele frequency: 4.164931278633903e-5
allele num: 120050
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.130C>T
  hgvsp: ENSP00000453783.1:p.Arg44Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.130C>T
  hgvsp: ENSP00000452618.1:p.Arg44Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.130C>T
  hgvsp: ENSP00000261520.4:p.Arg44Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.277C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.130C>T
  hgvsp: ENSP00000453593.1:p.Arg44Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-122C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.130C>T
  hgvsp: ENSP00000452714.1:p.Arg44Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.130C>T
  hgvsp: ENSP00000453303.1:p.Arg44Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.94C>T
  hgvsp: ENSP00000452713.1:p.Arg32Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.130C>T
  hgvsp: ENSP00000453820.1:p.Arg44Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.130C>T
  hgvsp: ENSP00000454162.1:p.Arg44Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.130C>T
  hgvsp: ENSP00000453041.1:p.Arg44Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.402C>T
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10991
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg44Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

15-60768282-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768282
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768282
    reference: chr 15
allele count: 1
allele frequency: 8.320852055250457e-6
allele num: 120180
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.126A>G
  hgvsp: ENST00000558512.1:c.126A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.126A>G
  hgvsp: ENST00000560072.1:c.126A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.398A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.126A>G
  hgvsp: ENST00000560520.1:c.126A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.126A>G
  hgvsp: ENST00000558181.1:c.126A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.126A>G
  hgvsp: ENST00000560406.1:c.126A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-126A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.126A>G
  hgvsp: ENST00000560668.1:c.126A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.90A>G
  hgvsp: ENST00000561446.1:c.90A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.126A>G
  hgvsp: ENST00000560895.1:c.126A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.126A>G
  hgvsp: ENST00000261520.4:c.126A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.126A>G
  hgvsp: ENST00000561114.1:c.126A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.273A>G
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11066
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu42Glu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD

15-60768300-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768300
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768300
    reference: chr 15
allele count: 1
allele frequency: 8.300546175938376e-6
allele num: 120474
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.108G>C
  hgvsp: ENSP00000453041.1:p.Met36Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.255G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.108G>C
  hgvsp: ENSP00000453820.1:p.Met36Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.72G>C
  hgvsp: ENSP00000452713.1:p.Met24Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.108G>C
  hgvsp: ENSP00000453303.1:p.Met36Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.108G>C
  hgvsp: ENSP00000453783.1:p.Met36Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.108G>C
  hgvsp: ENSP00000454162.1:p.Met36Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.108G>C
  hgvsp: ENSP00000453593.1:p.Met36Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.108G>C
  hgvsp: ENSP00000452618.1:p.Met36Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-144G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.380G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.108G>C
  hgvsp: ENSP00000452714.1:p.Met36Ile
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.108G>C
  hgvsp: ENSP00000261520.4:p.Met36Ile
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met36Ile
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/15-60768309-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768309
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768309
    reference: chr 15
allele count: 1
allele frequency: 8.30357884248111e-6
allele num: 120430
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.99T>G
  hgvsp: ENSP00000453820.1:p.Asp33Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.99T>G
  hgvsp: ENSP00000453593.1:p.Asp33Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.99T>G
  hgvsp: ENSP00000452714.1:p.Asp33Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.99T>G
  hgvsp: ENSP00000261520.4:p.Asp33Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.99T>G
  hgvsp: ENSP00000453783.1:p.Asp33Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-153T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.99T>G
  hgvsp: ENSP00000452618.1:p.Asp33Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.99T>G
  hgvsp: ENSP00000453303.1:p.Asp33Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.246T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.63T>G
  hgvsp: ENSP00000452713.1:p.Asp21Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.99T>G
  hgvsp: ENSP00000453041.1:p.Asp33Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.371T>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.99T>G
  hgvsp: ENSP00000454162.1:p.Asp33Glu
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11383
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp33Glu
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

15-60768311-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768311
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768311
    reference: chr 15
allele count: 1
allele frequency: 8.304268393954492e-6
allele num: 120420
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.97G>C
  hgvsp: ENSP00000453303.1:p.Asp33His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.369G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.97G>C
  hgvsp: ENSP00000453041.1:p.Asp33His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.244G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.97G>C
  hgvsp: ENSP00000452618.1:p.Asp33His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.97G>C
  hgvsp: ENSP00000453593.1:p.Asp33His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.97G>C
  hgvsp: ENSP00000454162.1:p.Asp33His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.97G>C
  hgvsp: ENSP00000453820.1:p.Asp33His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.97G>C
  hgvsp: ENSP00000453783.1:p.Asp33His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.97G>C
  hgvsp: ENSP00000452714.1:p.Asp33His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-155G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.61G>C
  hgvsp: ENSP00000452713.1:p.Asp21His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.97G>C
  hgvsp: ENSP00000261520.4:p.Asp33His
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42571
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11406
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp33His
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ

15-60768314-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768314
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768314
    reference: chr 15
allele count: 2
allele frequency: 1.661350345560872e-5
allele num: 120384
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.94A>G
  hgvsp: ENSP00000453783.1:p.Lys32Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.94A>G
  hgvsp: ENSP00000454162.1:p.Lys32Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.366A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.94A>G
  hgvsp: ENSP00000453593.1:p.Lys32Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.94A>G
  hgvsp: ENSP00000453303.1:p.Lys32Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.94A>G
  hgvsp: ENSP00000453820.1:p.Lys32Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.94A>G
  hgvsp: ENSP00000453041.1:p.Lys32Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.94A>G
  hgvsp: ENSP00000261520.4:p.Lys32Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.58A>G
  hgvsp: ENSP00000452713.1:p.Lys20Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.94A>G
  hgvsp: ENSP00000452714.1:p.Lys32Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.241A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-158A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.94A>G
  hgvsp: ENSP00000452618.1:p.Lys32Glu
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11417
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys32Glu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

15-60768320-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768320
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768320
    reference: chr 15
allele count: 2
allele frequency: 1.6627315353663e-5
allele num: 120284
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.52A>C
  hgvsp: ENSP00000452713.1:p.Asn18His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.88A>C
  hgvsp: ENSP00000453820.1:p.Asn30His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.88A>C
  hgvsp: ENSP00000261520.4:p.Asn30His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.88A>C
  hgvsp: ENSP00000453593.1:p.Asn30His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-164A>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.88A>C
  hgvsp: ENSP00000452618.1:p.Asn30His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.88A>C
  hgvsp: ENSP00000453303.1:p.Asn30His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.88A>C
  hgvsp: ENSP00000453783.1:p.Asn30His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.88A>C
  hgvsp: ENSP00000454162.1:p.Asn30His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.88A>C
  hgvsp: ENSP00000453041.1:p.Asn30His
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.235A>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.360A>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.88A>C
  hgvsp: ENSP00000452714.1:p.Asn30His
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42345
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2411
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn30His
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

15-60768326-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768326
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768326
    reference: chr 15
allele count: 2
allele frequency: 1.664835347784104e-5
allele num: 120132
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.82C>T
  hgvsp: ENSP00000453041.1:p.Arg28Ter
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.46C>T
  hgvsp: ENSP00000452713.1:p.Arg16Ter
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.229C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.82C>T
  hgvsp: ENSP00000453303.1:p.Arg28Ter
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.82C>T
  hgvsp: ENSP00000453783.1:p.Arg28Ter
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.82C>T
  hgvsp: ENSP00000261520.4:p.Arg28Ter
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.82C>T
  hgvsp: ENSP00000453593.1:p.Arg28Ter
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.82C>T
  hgvsp: ENSP00000453820.1:p.Arg28Ter
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.82C>T
  hgvsp: ENSP00000454162.1:p.Arg28Ter
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-170C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.82C>T
  hgvsp: ENSP00000452618.1:p.Arg28Ter
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.82C>T
  hgvsp: ENSP00000452714.1:p.Arg28Ter
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.354C>T
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42049
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg28Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

15-60768329-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768329
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768329
    reference: chr 15
allele count: 1
allele frequency: 8.331666999933347e-6
allele num: 120024
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.79T>C
  hgvsp: ENSP00000452714.1:p.Ser27Pro
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.351T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.43T>C
  hgvsp: ENSP00000452713.1:p.Ser15Pro
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.79T>C
  hgvsp: ENSP00000453041.1:p.Ser27Pro
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.79T>C
  hgvsp: ENSP00000454162.1:p.Ser27Pro
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.79T>C
  hgvsp: ENSP00000453303.1:p.Ser27Pro
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.79T>C
  hgvsp: ENSP00000261520.4:p.Ser27Pro
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.79T>C
  hgvsp: ENSP00000452618.1:p.Ser27Pro
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.79T>C
  hgvsp: ENSP00000453593.1:p.Ser27Pro
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.79T>C
  hgvsp: ENSP00000453783.1:p.Ser27Pro
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-173T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.226T>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.79T>C
  hgvsp: ENSP00000453820.1:p.Ser27Pro
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11509
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser27Pro
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/15-60768346-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768346
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768346
    reference: chr 15
allele count: 2
allele frequency: 1.687735228097416e-5
allele num: 118502
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.62G>T
  hgvsp: ENSP00000453303.1:p.Gly21Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.26G>T
  hgvsp: ENSP00000452713.1:p.Gly9Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.62G>T
  hgvsp: ENSP00000261520.4:p.Gly21Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.62G>T
  hgvsp: ENSP00000454162.1:p.Gly21Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.209G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.62G>T
  hgvsp: ENSP00000452618.1:p.Gly21Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.62G>T
  hgvsp: ENSP00000453783.1:p.Gly21Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.62G>T
  hgvsp: ENSP00000453820.1:p.Gly21Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.62G>T
  hgvsp: ENSP00000453593.1:p.Gly21Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.334G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.62G>T
  hgvsp: ENSP00000453041.1:p.Gly21Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-190G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.62G>T
  hgvsp: ENSP00000452714.1:p.Gly21Val
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2411
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly21Val
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

15-60768354-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768354
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768354
    reference: chr 15
allele count: 1
allele frequency: 8.5260214173658e-6
allele num: 117288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.54C>A
  hgvsp: ENST00000560072.1:c.54C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.18C>A
  hgvsp: ENST00000561446.1:c.18C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.201C>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.54C>A
  hgvsp: ENST00000560520.1:c.54C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.54C>A
  hgvsp: ENST00000558181.1:c.54C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.326C>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.54C>A
  hgvsp: ENST00000560406.1:c.54C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.54C>A
  hgvsp: ENST00000561114.1:c.54C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.54C>A
  hgvsp: ENST00000558512.1:c.54C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-198C>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.54C>A
  hgvsp: ENST00000560895.1:c.54C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.54C>A
  hgvsp: ENST00000560668.1:c.54C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.54C>A
  hgvsp: ENST00000261520.4:c.54C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38099
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro18Pro
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

15-60768356-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768356
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768356
    reference: chr 15
allele count: 1
allele frequency: 8.564136820649846e-6
allele num: 116766
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.52C>T
  hgvsp: ENSP00000453303.1:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.52C>T
  hgvsp: ENSP00000454162.1:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.324C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.16C>T
  hgvsp: ENSP00000452713.1:p.Pro6Ser
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.52C>T
  hgvsp: ENSP00000453820.1:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.52C>T
  hgvsp: ENSP00000453041.1:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.52C>T
  hgvsp: ENSP00000261520.4:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.52C>T
  hgvsp: ENSP00000453593.1:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-200C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.52C>T
  hgvsp: ENSP00000453783.1:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.199C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.52C>T
  hgvsp: ENSP00000452618.1:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.52C>T
  hgvsp: ENSP00000452714.1:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11465
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37386
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro18Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

15-60768362-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768362
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768362
    reference: chr 15
allele count: 1
allele frequency: 8.715812226541391e-6
allele num: 114734
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.10A>G
  hgvsp: ENSP00000452713.1:p.Ile4Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.46A>G
  hgvsp: ENSP00000261520.4:p.Ile16Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.46A>G
  hgvsp: ENSP00000453783.1:p.Ile16Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.46A>G
  hgvsp: ENSP00000454162.1:p.Ile16Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.46A>G
  hgvsp: ENSP00000453593.1:p.Ile16Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.46A>G
  hgvsp: ENSP00000452618.1:p.Ile16Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.46A>G
  hgvsp: ENSP00000453820.1:p.Ile16Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.46A>G
  hgvsp: ENSP00000453041.1:p.Ile16Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.46A>G
  hgvsp: ENSP00000452714.1:p.Ile16Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.46A>G
  hgvsp: ENSP00000453303.1:p.Ile16Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.318A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.193A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-206A>G
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34279
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5001
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile16Val
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

15-60768366-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768366
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768366
    reference: chr 15
allele count: 1
allele frequency: 8.847052162219548e-6
allele num: 113032
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.42G>C
  hgvsp: ENSP00000453041.1:p.Trp14Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.42G>C
  hgvsp: ENSP00000453303.1:p.Trp14Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-210G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.6G>C
  hgvsp: ENSP00000452713.1:p.Arg2Ser
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.42G>C
  hgvsp: ENSP00000452714.1:p.Trp14Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.42G>C
  hgvsp: ENSP00000453820.1:p.Trp14Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.42G>C
  hgvsp: ENSP00000261520.4:p.Trp14Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.42G>C
  hgvsp: ENSP00000453783.1:p.Trp14Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.314G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.189G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.42G>C
  hgvsp: ENSP00000453593.1:p.Trp14Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.42G>C
  hgvsp: ENSP00000454162.1:p.Trp14Cys
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.42G>C
  hgvsp: ENSP00000452618.1:p.Trp14Cys
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3839
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6722
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp14Cys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

15-60768387-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768387
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768387
    reference: chr 15
allele count: 1
allele frequency: 9.490547414774884e-6
allele num: 105368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-210-21G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.42-21G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.42-21G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.314-21G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.42-21G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.42-21G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.6-21G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.42-21G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.42-21G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.42-21G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.42-21G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.42-21G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.189-21G>A
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18274
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4720
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6965
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

15-60768391-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768391
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768391
    reference: chr 15
allele count: 1
allele frequency: 9.593430418849172e-6
allele num: 104238
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.42-25G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.189-25G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.6-25G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.314-25G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.42-25G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-210-25G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.42-25G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.42-25G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.42-25G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.42-25G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.42-25G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.42-25G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.42-25G>A
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5761
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6579
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14809
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19970
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

15-60768413-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60768413
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60768413
    reference: chr 15
allele count: 1
allele frequency: 1.06256375382523e-5
allele num: 94112
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.189-47A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.42-47A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.6-47A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.42-47A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-210-47A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.42-47A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.42-47A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.42-47A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.42-47A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.42-47A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.42-47A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.42-47A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.314-47A>G
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19280
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8596
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12096
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

15-60770090-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60770090
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60770090
    reference: chr 15
allele count: 5
allele frequency: 4.119023297195769e-5
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.41+46G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.41+46G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.188+677G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.5+1112G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.41+46G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-211+46G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.41+46G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.41+46G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.313+46G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.41+46G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.41+46G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.41+46G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.41+46G>A
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4780
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5407
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5369
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/15-60770090-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60770090
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60770090
    reference: chr 15
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.41+46G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.41+46G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.41+46G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.41+46G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.41+46G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.41+46G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.5+1112G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.41+46G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-211+46G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.313+46G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.188+677G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.41+46G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.41+46G>T
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5407
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5369
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4780
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

15-60770091-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60770091
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60770091
    reference: chr 15
allele count: 3
allele frequency: 2.471251112063001e-5
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.41+45G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.5+1111G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.41+45G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.313+45G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-211+45G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.41+45G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.41+45G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.41+45G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.41+45G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.41+45G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.188+676G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.41+45G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.41+45G>A
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4333
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8266
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2179
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5322
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5369
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/15-60770094-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60770094
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60770094
    reference: chr 15
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.5+1108G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.41+42G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.41+42G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.41+42G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.41+42G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-211+42G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.41+42G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.41+42G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.41+42G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.41+42G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.313+42G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.188+673G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.41+42G>T
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4781
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5323
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3003
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4332
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5371
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

15-60770101-CCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60770101
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60770099
    reference: chr 15
allele count: 18
allele frequency: 1.482775095968499e-4
allele num: 121394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.41+33_41+34delAG
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.41+33_41+34delAG
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.41+33_41+34delAG
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.313+33_313+34delAG
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.41+33_41+34delAG
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.188+664_188+665delAG
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-211+33_-211+34delAG
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.41+33_41+34delAG
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.41+33_41+34delAG
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.41+33_41+34delAG
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.41+33_41+34delAG
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.41+33_41+34delAG
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.5+1099_5+1100delAG
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5403
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5322
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4331
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4414
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3003
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: CCT
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS

15-60770104-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60770104
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60770104
    reference: chr 15
allele count: 2
allele frequency: 1.648043772042586e-5
allele num: 121356
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.188+663G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.41+32G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.41+32G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.41+32G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.41+32G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.313+32G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-211+32G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.5+1098G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.41+32G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.41+32G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.41+32G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.41+32G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.41+32G>A
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4331
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5322
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3474
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4781
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum

15-60770111-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60770111
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60770111
    reference: chr 15
allele count: 40
allele frequency: 3.294838635277837e-4
allele num: 121402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.41+25C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.41+25C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.5+1091C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.41+25C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.41+25C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.41+25C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.41+25C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.41+25C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.188+656C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.41+25C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-211+25C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.313+25C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.41+25C>T
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8273
  bin: 9.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 4413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5369
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3472
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5399
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

15-60770114-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60770114
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60770114
    reference: chr 15
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.41+22A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.41+22A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.313+22A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.5+1088A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.41+22A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.41+22A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.41+22A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.41+22A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.41+22A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.41+22A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-211+22A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.188+653A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.41+22A>G
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8257
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4785
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/15-60770128-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60770128
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60770128
    reference: chr 15
allele count: 695
allele frequency: 5.802013590903778e-3
allele num: 119786
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.188+639G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.41+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.41+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-211+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.41+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.5+1074G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.41+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.41+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.41+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.41+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.41+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.313+8G>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.41+8G>T
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 4323
  bin: 6.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4746
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5396
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5348
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 8398
  bin: 9.75e1
  variant carriers: 636
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3481
  bin: 7.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
hgvs: c.41+8G>T
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

15-60770145-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60770145
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60770145
    reference: chr 15
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.32G>A
  hgvsp: ENSP00000452714.1:p.Gly11Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.304G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.32G>A
  hgvsp: ENSP00000453783.1:p.Gly11Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.32G>A
  hgvsp: ENSP00000452618.1:p.Gly11Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.188+622G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.32G>A
  hgvsp: ENSP00000453820.1:p.Gly11Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.32G>A
  hgvsp: ENSP00000453593.1:p.Gly11Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.32G>A
  hgvsp: ENSP00000453041.1:p.Gly11Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.32G>A
  hgvsp: ENSP00000261520.4:p.Gly11Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.5+1057G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.32G>A
  hgvsp: ENSP00000453303.1:p.Gly11Glu
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-220G>A
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.32G>A
  hgvsp: ENSP00000454162.1:p.Gly11Glu
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5382
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5416
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3037
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4480
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly11Glu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD

15-60770158-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60770158
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60770158
    reference: chr 15
allele count: 2
allele frequency: 1.647419317638919e-5
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.19A>G
  hgvsp: ENSP00000261520.4:p.Ile7Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.19A>G
  hgvsp: ENSP00000453783.1:p.Ile7Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.19A>G
  hgvsp: ENSP00000452618.1:p.Ile7Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.19A>G
  hgvsp: ENSP00000453593.1:p.Ile7Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-233A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.291A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.19A>G
  hgvsp: ENSP00000453303.1:p.Ile7Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.19A>G
  hgvsp: ENSP00000452714.1:p.Ile7Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.19A>G
  hgvsp: ENSP00000453820.1:p.Ile7Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.19A>G
  hgvsp: ENSP00000454162.1:p.Ile7Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.19A>G
  hgvsp: ENSP00000453041.1:p.Ile7Val
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.5+1044A>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.188+609A>G
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4332
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5417
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4480
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5448
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7716
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Ile7Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

15-60770178-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60770178
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60770178
    reference: chr 15
allele count: 67
allele frequency: 5.518945634266886e-4
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.-2A>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.5+1024A>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.-2A>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.-2A>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.-2A>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.188+589A>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.-2A>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-253A>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.-2A>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.-2A>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.-2A>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.271A>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.-2A>C
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4332
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5445
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7727
  bin: 9.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5383
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4478
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4794
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5413
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

15-60770181-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60770181
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60770181
    reference: chr 15
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.-5G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.-5G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.-5G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.-5G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.-5G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.-5G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.-5G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.268G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.-5G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.-5G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.5+1021G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-256G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.188+586G>C
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4330
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3501
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3941
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5419
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2637
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5390
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3034
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4484
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

15-60770184-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60770184
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60770184
    reference: chr 15
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.-8C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.-8C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.-8C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.5+1018C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.-8C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.-8C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-259C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.265C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.-8C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.-8C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.-8C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.-8C>G
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.188+583C>G
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2637
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4331
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4485
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4797
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5389
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3034
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

15-60770189-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60770189
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60770189
    reference: chr 15
allele count: 518
allele frequency: 4.266886326194399e-3
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.-13G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.-13G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.-13G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.-13G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-264G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.5+1013G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.-13G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.-13G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.260G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.188+578G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.-13G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.-13G>C
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.-13G>C
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5437
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3926
  bin: 6.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 8.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 9.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5411
  bin: 5.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 3501
  bin: 7.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 7789
  bin: 9.75e1
  variant carriers: 272
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 6.25e1
  variant carriers: 30
genotype quality: GenotypeQuality
num of homozygotes: 13
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum

15-60770191-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 60770191
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 60770191
    reference: chr 15
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453593
  ensembl transcript: ENST00000558181
  gene symbol: NARG2
  hgvsc: ENST00000558181.1:c.-15C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000558654
  gene symbol: NARG2
  hgvsc: ENST00000558654.1:n.258C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453303
  ensembl transcript: ENST00000560668
  gene symbol: NARG2
  hgvsc: ENST00000560668.1:c.-15C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452713
  ensembl transcript: ENST00000561446
  gene symbol: NARG2
  hgvsc: ENST00000561446.1:c.5+1011C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452714
  ensembl transcript: ENST00000558512
  gene symbol: NARG2
  hgvsc: ENST00000558512.1:c.-15C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000261520
  ensembl transcript: ENST00000261520
  gene symbol: NARG2
  hgvsc: ENST00000261520.4:c.-15C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000394009
  ensembl transcript: ENST00000439632
  gene symbol: NARG2
  hgvsc: ENST00000439632.1:c.-266C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000454162
  ensembl transcript: ENST00000561114
  gene symbol: NARG2
  hgvsc: ENST00000561114.1:c.-15C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453820
  ensembl transcript: ENST00000560895
  gene symbol: NARG2
  hgvsc: ENST00000560895.1:c.-15C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453041
  ensembl transcript: ENST00000560072
  gene symbol: NARG2
  hgvsc: ENST00000560072.1:c.-15C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000452618
  ensembl transcript: ENST00000560520
  gene symbol: NARG2
  hgvsc: ENST00000560520.1:c.-15C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128915
  ensembl transcript: ENST00000561087
  gene symbol: NARG2
  hgvsc: ENST00000561087.1:n.188+576C>T
  variant of: http://identifiers.org/hgnc/29885
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128915
  ensembl protein: ENSP00000453783
  ensembl transcript: ENST00000560406
  gene symbol: NARG2
  hgvsc: ENST00000560406.1:c.-15C>T
  variant of: http://identifiers.org/hgnc/29885
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5413
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5444
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3012
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
reference allele: G

GenotypeDepth
all individuals: 3356
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 98
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10037
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 280
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1944
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2463
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5983
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46229
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998320940273447e-5
allele num: 66704
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.879999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.68e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.475214e6

FS
type: SiteQuality
SIO_000300: 5.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

QD
type: SiteQuality
SIO_000300: 1.107e1

GenotypeDepth
all individuals: 72
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 221
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 67
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 159
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 44482
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 59
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2463
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 46229
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5983
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1944
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.99e-1

FS
type: SiteQuality
SIO_000300: 5.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.879999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 7.68e-1

DP
type: SiteQuality
SIO_000300: 1.475214e6

QD
type: SiteQuality
SIO_000300: 1.107e1

GenotypeDepth
all individuals: 124
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 97
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 279
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 45
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 892
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2458
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46181
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5984
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1944
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
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MQ
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InbreedingCoeff
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MQRankSum
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QD
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DP
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ReadPosRankSum
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FS
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

Other
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African
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Latino
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allele num: 11534
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European (Finnish)
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East Asian
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FS
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQRankSum
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VQSLOD
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MQ
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DP
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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Latino
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 3.011957471160507e-5
allele num: 66402
num of homozygotes: 0

InbreedingCoeff
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VQSLOD
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MQRankSum
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MQ
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BaseQRankSum
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ReadPosRankSum
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FS
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QD
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Other
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European (Non-Finnish)
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allele num: 66192
num of homozygotes: 0

Latino
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South Asian
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African
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European (Finnish)
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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DP
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VQSLOD
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FS
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MQRankSum
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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South Asian
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European (Non-Finnish)
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African
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East Asian
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MQ
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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QD
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FS
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BaseQRankSum
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DP
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ClippingRankSum
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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European (Non-Finnish)
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South Asian
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East Asian
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European (Finnish)
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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QD
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FS
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MQ
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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African
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European (Non-Finnish)
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European (Finnish)
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Other
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Latino
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FS
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
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QD
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MQ
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DP
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InbreedingCoeff
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.641870350690754e-5
allele num: 15056
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
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SIO_000300: 1.69e-1

VQSLOD
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FS
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ReadPosRankSum
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DP
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InbreedingCoeff
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SIO_000300: 3.3e-3

MQRankSum
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BaseQRankSum
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 4.190515126737531e-3
allele num: 9784
num of homozygotes: 1

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.529239050648397e-5
allele num: 65392
num of homozygotes: 0

Other
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allele num: 872
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Latino
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allele num: 11454
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQ
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VQSLOD
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QD
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FS
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9684
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele count: 0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.536334306345061e-5
allele num: 65090
num of homozygotes: 0

South Asian
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allele count: 0
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BaseQRankSum
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SIO_000300: 2.43e0

FS
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SIO_000300: 8.19e-1

ClippingRankSum
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SIO_000300: 5.8e-1

MQRankSum
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ReadPosRankSum
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MQ
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QD
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DP
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SIO_000300: 1.377768e6

InbreedingCoeff
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SIO_000300: -9.0e-4

VQSLOD
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SIO_000300: -4.826e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538272212650751e-5
allele num: 65008
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9636
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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ReadPosRankSum
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BaseQRankSum
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DP
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QD
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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FS
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SIO_000300: 0.0e0

MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 2.354048964218456e-4
allele num: 8496
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South Asian
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Other
type: Population
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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InbreedingCoeff
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SIO_000300: -1.2e-3

MQ
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FS
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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allele frequency: 1.544974198930878e-5
allele num: 64726
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East Asian
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Other
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Latino
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African
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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MQ
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QD
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BaseQRankSum
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VQSLOD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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South Asian
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Other
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African
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East Asian
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FS
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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DP
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VQSLOD
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QD
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.555790652809758e-5
allele num: 64276
num of homozygotes: 0

Other
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ClippingRankSum
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MQRankSum
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MQ
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DP
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FS
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VQSLOD
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QD
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: -6.46e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.558214909000249e-5
allele num: 64176
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9426
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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Other
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BaseQRankSum
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SIO_000300: 2.47e0

MQ
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SIO_000300: 6.0e1

ReadPosRankSum
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MQRankSum
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DP
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VQSLOD
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InbreedingCoeff
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FS
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 1.326259946949602e-4
allele num: 7540
num of homozygotes: 0

Latino
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
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allele num: 56796
num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

Other
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African
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South Asian
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MQRankSum
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SIO_000300: 2.65e-1

MQ
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SIO_000300: 6.0e1

FS
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InbreedingCoeff
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QD
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ReadPosRankSum
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BaseQRankSum
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DP
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VQSLOD
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ClippingRankSum
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SIO_000300: -8.799999999999999e-2

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 1.291989664082687e-3
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African
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
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num of homozygotes: 0

South Asian
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Latino
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European (Non-Finnish)
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allele count: 19
allele frequency: 3.34083556055704e-4
allele num: 56872
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FS
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SIO_000300: 1.596e0

ReadPosRankSum
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VQSLOD
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QD
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MQ
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InbreedingCoeff
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DP
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Other
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European (Finnish)
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Latino
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African
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South Asian
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VQSLOD
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ReadPosRankSum
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QD
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ClippingRankSum
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MQ
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BaseQRankSum
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FS
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InbreedingCoeff
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DP
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele num: 58784
num of homozygotes: 0

Latino
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South Asian
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Other
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African
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East Asian
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European (Finnish)
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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FS
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QD
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MQRankSum
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 2.249550089982004e-4
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num of homozygotes: 0

Latino
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East Asian
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9412
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.05e-1

VQSLOD
type: SiteQuality
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DP
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FS
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ReadPosRankSum
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SIO_000300: -4.45e-1

BaseQRankSum
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SIO_000300: 2.99e0

QD
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ClippingRankSum
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SIO_000300: 6.4e-2

InbreedingCoeff
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SIO_000300: -1.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.645169781521453e-5
allele num: 60784
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13730
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.867e1

MQRankSum
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SIO_000300: -3.78e-1

DP
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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FS
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QD
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ClippingRankSum
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ReadPosRankSum
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SIO_000300: -1.135e0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9832
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8422
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14824
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.884150675195451e-5
allele num: 11256
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63692
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.87e0

DP
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VQSLOD
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MQ
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MQRankSum
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ReadPosRankSum
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SIO_000300: 1.99e0

BaseQRankSum
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SIO_000300: 2.03e0

FS
type: SiteQuality
SIO_000300: 1.771e0

InbreedingCoeff
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SIO_000300: 2.4e-3

ClippingRankSum
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SIO_000300: -1.709e0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.560695445890689e-5
allele num: 64074
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11276
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.122e0

QD
type: SiteQuality
SIO_000300: 1.057e1

InbreedingCoeff
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SIO_000300: 2.5e-3

DP
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SIO_000300: 1.460403e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-2

FS
type: SiteQuality
SIO_000300: 3.488e0

MQRankSum
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SIO_000300: 1.78e0

VQSLOD
type: SiteQuality
SIO_000300: -2.053e-1

ReadPosRankSum
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SIO_000300: 1.21e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 5
allele frequency: 3.305566574110802e-4
allele num: 15126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11300
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64320
num of homozygotes: 0

DP
type: SiteQuality
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MQRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQ
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11392
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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African
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South Asian
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East Asian
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European (Finnish)
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European (Non-Finnish)
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DP
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QD
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BaseQRankSum
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MQRankSum
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VQSLOD
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MQ
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FS
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15930
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.525041176111755e-5
allele num: 65572
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European (Finnish)
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Latino
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num of homozygotes: 0

MQ
type: SiteQuality
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DP
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QD
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InbreedingCoeff
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BaseQRankSum
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FS
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VQSLOD
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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European (Finnish)
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East Asian
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South Asian
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InbreedingCoeff
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DP
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MQ
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VQSLOD
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MQRankSum
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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Other
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European (Non-Finnish)
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African
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Latino
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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FS
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QD
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MQRankSum
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MQ
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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European (Finnish)
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European (Non-Finnish)
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African
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Latino
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ClippingRankSum
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VQSLOD
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DP
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ReadPosRankSum
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FS
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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QD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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East Asian
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Other
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European (Finnish)
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African
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QD
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ClippingRankSum
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FS
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DP
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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East Asian
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European (Finnish)
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South Asian
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BaseQRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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FS
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MQRankSum
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QD
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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East Asian
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African
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European (Non-Finnish)
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FS
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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DP
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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Latino
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allele frequency: 8.691117677733357e-5
allele num: 11506
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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FS
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ClippingRankSum
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MQRankSum
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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MQ
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QD
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DP
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.508341126429153e-5
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South Asian
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East Asian
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ClippingRankSum
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QD
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VQSLOD
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InbreedingCoeff
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FS
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BaseQRankSum
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MQ
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MQRankSum
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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African
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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Latino
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Other
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BaseQRankSum
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ReadPosRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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DP
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MQRankSum
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FS
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.018412315122246e-5
allele num: 66260
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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FS
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ClippingRankSum
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QD
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ReadPosRankSum
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VQSLOD
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MQRankSum
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MQ
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DP
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InbreedingCoeff
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BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Latino
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Other
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African
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 3.020965500573983e-5
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ReadPosRankSum
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FS
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MQ
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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DP
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MQRankSum
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QD
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Latino
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African
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South Asian
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Other
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European (Finnish)
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QD
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ReadPosRankSum
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MQRankSum
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MQ
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DP
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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FS
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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Latino
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African
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Other
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European (Finnish)
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East Asian
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MQRankSum
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
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DP
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FS
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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allele frequency: 1.238390092879257e-4
allele num: 16150
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Latino
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African
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European (Non-Finnish)
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European (Finnish)
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BaseQRankSum
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ClippingRankSum
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FS
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QD
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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MQ
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VQSLOD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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Latino
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South Asian
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African
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European (Non-Finnish)
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European (Finnish)
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ClippingRankSum
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VQSLOD
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DP
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BaseQRankSum
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ReadPosRankSum
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FS
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MQRankSum
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MQ
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QD
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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allele num: 63910
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African
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East Asian
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Other
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South Asian
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Latino
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BaseQRankSum
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VQSLOD
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QD
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MQ
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InbreedingCoeff
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FS
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MQRankSum
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ClippingRankSum
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Other
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Latino
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European (Non-Finnish)
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European (Finnish)
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South Asian
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QD
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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FS
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MQRankSum
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DP
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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South Asian
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European (Non-Finnish)
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African
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Latino
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DP
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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FS
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MQ
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ClippingRankSum
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InbreedingCoeff
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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Latino
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European (Non-Finnish)
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African
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South Asian
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East Asian
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MQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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QD
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ClippingRankSum
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InbreedingCoeff
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DP
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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European (Finnish)
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African
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South Asian
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InbreedingCoeff
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QD
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MQ
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BaseQRankSum
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VQSLOD
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FS
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MQRankSum
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

East Asian
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European (Finnish)
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African
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European (Non-Finnish)
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South Asian
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Other
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QD
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MQ
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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FS
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ClippingRankSum
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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Latino
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South Asian
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European (Non-Finnish)
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African
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European (Finnish)
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ClippingRankSum
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QD
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MQ
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DP
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MQRankSum
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VQSLOD
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FS
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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European (Non-Finnish)
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East Asian
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South Asian
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European (Finnish)
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DP
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MQRankSum
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BaseQRankSum
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MQ
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ReadPosRankSum
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FS
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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Latino
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East Asian
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European (Finnish)
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South Asian
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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MQ
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DP
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FS
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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Latino
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South Asian
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African
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European (Non-Finnish)
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Other
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InbreedingCoeff
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ClippingRankSum
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QD
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FS
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ReadPosRankSum
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BaseQRankSum
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DP
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MQ
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Finnish)
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East Asian
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European (Non-Finnish)
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South Asian
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VQSLOD
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ReadPosRankSum
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DP
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MQRankSum
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MQ
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InbreedingCoeff
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FS
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.199e1

MQRankSum
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SIO_000300: 1.05e0

ReadPosRankSum
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SIO_000300: 1.58e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

FS
type: SiteQuality
SIO_000300: 1.516e0

VQSLOD
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SIO_000300: 3.48e-1

MQ
type: SiteQuality
SIO_000300: 5.882e1

DP
type: SiteQuality
SIO_000300: 4.044224e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 40

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1793
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variant carriers: 0

GenotypeQuality
all individuals: 1647
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 31
allele frequency: 4.645447461487742e-4
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

African
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allele count: 4
allele frequency: 3.843936190659235e-4
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.19e-1

FS
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SIO_000300: 0.0e0

ReadPosRankSum
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SIO_000300: 5.06e-1

QD
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VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.400000000000001e-2

DP
type: SiteQuality
SIO_000300: 4.044879e6

BaseQRankSum
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SIO_000300: -3.872e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1984
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.97e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 1.994e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e0

QD
type: SiteQuality
SIO_000300: 1.551e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.05e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

DP
type: SiteQuality
SIO_000300: 4.042979e6

VQSLOD
type: SiteQuality
SIO_000300: 1.43e0

GenotypeDepth
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variant carriers: 19

GenotypeDepth
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variant carriers: 19

GenotypeDepth
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variant carriers: 6

GenotypeDepth
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variant carriers: 25

GenotypeDepth
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variant carriers: 3

GenotypeDepth
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variant carriers: 18

GenotypeDepth
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variant carriers: 18

GenotypeQuality
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variant carriers: 23

GenotypeQuality
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GenotypeQuality
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variant carriers: 18

GenotypeQuality
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variant carriers: 22

GenotypeQuality
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variant carriers: 34

GenotypeQuality
all individuals: 1990
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variant carriers: 10

GenotypeQuality
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variant carriers: 17

GenotypeQuality
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variant carriers: 22

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 78
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GenotypeQuality
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variant carriers: 24

GenotypeQuality
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variant carriers: 20

GenotypeQuality
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variant carriers: 16

GenotypeQuality
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GenotypeQuality
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variant carriers: 17

GenotypeQuality
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GenotypeQuality
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variant carriers: 12

GenotypeQuality
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GenotypeQuality
all individuals: 46565
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variant carriers: 404

African
type: Population
allele count: 135
allele frequency: 1.341414944356121e-2
allele num: 10064
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 1.279962764719572e-3
allele num: 8594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 145
allele frequency: 2.262796504369538e-2
allele num: 6408
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 386
allele frequency: 5.866261398176292e-3
allele num: 65800
num of homozygotes: 0

Other
type: Population
allele count: 10
allele frequency: 1.138952164009112e-2
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.933610677760444e-4
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.947e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.182e0

ClippingRankSum
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SIO_000300: 3.59e0

FS
type: SiteQuality
SIO_000300: 1.03895e2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.04e-2

VQSLOD
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SIO_000300: -5.619e1

BaseQRankSum
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SIO_000300: -4.098e0

MQRankSum
type: SiteQuality
SIO_000300: -1.1e-2

DP
type: SiteQuality
SIO_000300: 4.074988e6

QD
type: SiteQuality
SIO_000300: 8.0e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
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South Asian
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allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

East Asian
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.009e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.7e-2

InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
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FS
type: SiteQuality
SIO_000300: 4.92e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
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SIO_000300: -2.638e0

QD
type: SiteQuality
SIO_000300: 2.328e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.972e1

FS
type: SiteQuality
SIO_000300: 5.19e-1

ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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BaseQRankSum
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SIO_000300: -4.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.88e-1

DP
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SIO_000300: 3.958838e6

QD
type: SiteQuality
SIO_000300: 1.123e1

GenotypeDepth
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variant carriers: 3

GenotypeDepth
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GenotypeDepth
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variant carriers: 8

GenotypeDepth
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 67

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2278
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GenotypeQuality
all individuals: 1088
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.909656244601831e-4
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 42
allele frequency: 6.294020680353664e-4
allele num: 66730
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 15
allele frequency: 9.085402786190188e-4
allele num: 16510
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.31e1

MQRankSum
type: SiteQuality
SIO_000300: 3.0e-1

FS
type: SiteQuality
SIO_000300: 5.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.08e0

DP
type: SiteQuality
SIO_000300: 3.96047e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

VQSLOD
type: SiteQuality
SIO_000300: 4.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1818
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4797
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7698
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1088
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2018
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48032
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2393
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1808
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1377
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2279
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1677
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.956981e6

VQSLOD
type: SiteQuality
SIO_000300: -1.489e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.838e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.909e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e0

MQRankSum
type: SiteQuality
SIO_000300: 8.31e-1

FS
type: SiteQuality
SIO_000300: 9.609e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e0

GenotypeDepth
all individuals: 7698
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1968
bin: 2.75e1
variant carriers: 0

GenotypeDepth
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bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5451
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1378
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2393
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1807
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1677
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48031
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1089
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.95e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e0

VQSLOD
type: SiteQuality
SIO_000300: 3.67e0

MQRankSum
type: SiteQuality
SIO_000300: -5.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 3.956835e6

QD
type: SiteQuality
SIO_000300: 1.693e1

GenotypeDepth
all individuals: 3021
bin: 7.75e1
variant carriers: 27

GenotypeDepth
all individuals: 5380
bin: 4.25e1
variant carriers: 5

GenotypeDepth
all individuals: 4789
bin: 5.75e1
variant carriers: 12

GenotypeDepth
all individuals: 2634
bin: 8.25e1
variant carriers: 25

GenotypeQuality
all individuals: 1802
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2014
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2248
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2391
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1376
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1084
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48049
bin: 9.75e1
variant carriers: 505

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1673
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 18
allele frequency: 1.554672655035412e-3
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 494
allele frequency: 4.748173779315648e-2
allele num: 10404
num of homozygotes: 13

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.994125756758376e-5
allele num: 66732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.41e-2

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.82e-1

FS
type: SiteQuality
SIO_000300: 6.14e-1

DP
type: SiteQuality
SIO_000300: 3.967597e6

QD
type: SiteQuality
SIO_000300: 1.505e1

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

GenotypeDepth
all individuals: 7603
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4823
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3507
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4356
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2028
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2266
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1817
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1681
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47963
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2415
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1089
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1382
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0