16-3724403-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724403
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724403
    reference: chr 16
allele count: 2
allele frequency: 1.652810604432838e-5
allele num: 121006
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.346C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.981C>T
  hgvsp: ENST00000246957.5:c.981C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.354C>T
  hgvsp: ENST00000576335.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.354C>T
  hgvsp: ENST00000575671.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5347G>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.822C>T
  hgvsp: ENST00000538171.1:c.822C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.430C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*127C>T
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11478
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2690
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6396
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Tyr327Tyr
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP

16-3724407-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724407
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724407
    reference: chr 16
allele count: 9
allele frequency: 7.439738121218133e-5
allele num: 120972
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.350G>A
  hgvsp: ENSP00000459354.1:p.Arg117His
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.818G>A
  hgvsp: ENSP00000442070.1:p.Arg273His
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.977G>A
  hgvsp: ENSP00000246957.5:p.Arg326His
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.426G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*123G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5343C>T
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.350G>A
  hgvsp: ENSP00000458166.1:p.Arg117His
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.342G>A
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12322
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6398
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3989
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2543
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg326His
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

16-3724408-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724408
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724408
    reference: chr 16
allele count: 9
allele frequency: 7.440107137542781e-5
allele num: 120966
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.341C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.349C>T
  hgvsp: ENSP00000459354.1:p.Arg117Cys
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5342G>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.817C>T
  hgvsp: ENSP00000442070.1:p.Arg273Cys
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.349C>T
  hgvsp: ENSP00000458166.1:p.Arg117Cys
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.976C>T
  hgvsp: ENSP00000246957.5:p.Arg326Cys
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.425C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*122C>T
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12324
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6394
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11487
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3409
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg326Cys
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum

16-3724409-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724409
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724409
    reference: chr 16
allele count: 1
allele frequency: 8.265692417053776e-6
allele num: 120982
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.816C>T
  hgvsp: ENST00000538171.1:c.816C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.975C>T
  hgvsp: ENST00000246957.5:c.975C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5341G>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.348C>T
  hgvsp: ENST00000576335.1:c.348C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.424C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.340C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.348C>T
  hgvsp: ENST00000575671.1:c.348C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*121C>T
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12338
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11483
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24073
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3409
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro325Pro
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/16-3724412-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724412
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724412
    reference: chr 16
allele count: 1
allele frequency: 8.265555775970376e-6
allele num: 120984
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.813G>T
  hgvsp: ENSP00000442070.1:p.Lys271Asn
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.972G>T
  hgvsp: ENSP00000246957.5:p.Lys324Asn
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.421G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5338C>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.345G>T
  hgvsp: ENSP00000458166.1:p.Lys115Asn
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.337G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*118G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.345G>T
  hgvsp: ENSP00000459354.1:p.Lys115Asn
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11473
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12310
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17524
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2690
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2544
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Lys324Asn
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ

16-3724417-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724417
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724417
    reference: chr 16
allele count: 3
allele frequency: 2.480445818795165e-5
allele num: 120946
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.332G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.808G>A
  hgvsp: ENSP00000442070.1:p.Asp270Asn
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.416G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.340G>A
  hgvsp: ENSP00000458166.1:p.Asp114Asn
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.340G>A
  hgvsp: ENSP00000459354.1:p.Asp114Asn
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5333C>T
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*113G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.967G>A
  hgvsp: ENSP00000246957.5:p.Asp323Asn
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12196
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4369
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17481
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23677
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14094
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3054
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp323Asn
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-3724418-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724418
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724418
    reference: chr 16
allele count: 3
allele frequency: 2.480404802063697e-5
allele num: 120948
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.966C>T
  hgvsp: ENST00000246957.5:c.966C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*112C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.339C>T
  hgvsp: ENST00000576335.1:c.339C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.339C>T
  hgvsp: ENST00000575671.1:c.339C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.415C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.807C>T
  hgvsp: ENST00000538171.1:c.807C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5332G>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.331C>T
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6394
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4369
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17482
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3970
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3052
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23766
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His322His
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/16-3724427-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724427
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724427
    reference: chr 16
allele count: 2
allele frequency: 1.654697686732634e-5
allele num: 120868
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.406G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.330G>T
  hgvsp: ENST00000575671.1:c.330G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*103G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.957G>T
  hgvsp: ENST00000246957.5:c.957G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.798G>T
  hgvsp: ENST00000538171.1:c.798G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.330G>T
  hgvsp: ENST00000576335.1:c.330G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5323C>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.322G>T
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12008
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4384
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3944
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3018
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1826
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala319Ala
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

16-3724428-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724428
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724428
    reference: chr 16
allele count: 13
allele frequency: 1.075268817204301e-4
allele num: 120900
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.956C>T
  hgvsp: ENSP00000246957.5:p.Ala319Val
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.329C>T
  hgvsp: ENSP00000458166.1:p.Ala110Val
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.797C>T
  hgvsp: ENSP00000442070.1:p.Ala266Val
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*102C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.405C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.329C>T
  hgvsp: ENSP00000459354.1:p.Ala110Val
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5322G>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.321C>T
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17399
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2689
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11410
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4372
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6385
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2546
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala319Val
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

16-3724430-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724430
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724430
    reference: chr 16
allele count: 2
allele frequency: 1.654396558855158e-5
allele num: 120890
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.795C>T
  hgvsp: ENST00000538171.1:c.795C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*100C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.319C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.954C>T
  hgvsp: ENST00000246957.5:c.954C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.327C>T
  hgvsp: ENST00000575671.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.403C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.327C>T
  hgvsp: ENST00000576335.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5320G>A
  variant of: http://identifiers.org/hgnc/2956
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11393
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17392
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4374
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2689
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3033
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6710
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val318Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

16-3724432-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724432
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724432
    reference: chr 16
allele count: 3
allele frequency: 2.481635894381576e-5
allele num: 120888
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.952G>A
  hgvsp: ENSP00000246957.5:p.Val318Ile
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.401G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5318C>T
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.317G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*98G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.325G>A
  hgvsp: ENSP00000459354.1:p.Val109Ile
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.325G>A
  hgvsp: ENSP00000458166.1:p.Val109Ile
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.793G>A
  hgvsp: ENSP00000442070.1:p.Val265Ile
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17348
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2690
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6377
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12088
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23315
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14099
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val318Ile
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

16-3724437-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724437
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724437
    reference: chr 16
allele count: 2
allele frequency: 1.654944145635085e-5
allele num: 120850
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.320G>A
  hgvsp: ENSP00000459354.1:p.Arg107His
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.396G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.788G>A
  hgvsp: ENSP00000442070.1:p.Arg263His
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.947G>A
  hgvsp: ENSP00000246957.5:p.Arg316His
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.312G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.320G>A
  hgvsp: ENSP00000458166.1:p.Arg107His
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5313C>T
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*93G>A
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6381
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2688
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4380
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14102
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1825
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg316His
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

16-3724438-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724438
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724438
    reference: chr 16
allele count: 3
allele frequency: 2.482539472377611e-5
allele num: 120844
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.319C>T
  hgvsp: ENSP00000458166.1:p.Arg107Cys
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*92C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.787C>T
  hgvsp: ENSP00000442070.1:p.Arg263Cys
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5312G>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.395C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.946C>T
  hgvsp: ENSP00000246957.5:p.Arg316Cys
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.319C>T
  hgvsp: ENSP00000459354.1:p.Arg107Cys
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.311C>T
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6662
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14105
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2546
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3387
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg316Cys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

16-3724444-ACTC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724444
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724441
    reference: chr 16
allele count: 70
allele frequency: 5.792687972724715e-4
allele num: 120842
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.386_388delGAG
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.310_312delGAG
  hgvsp: ENSP00000459354.1:p.Glu104del
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*83_*85delGAG
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.778_780delGAG
  hgvsp: ENSP00000442070.1:p.Glu260del
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.937_939delGAG
  hgvsp: ENSP00000246957.5:p.Glu313del
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.310_312delGAG
  hgvsp: ENSP00000458166.1:p.Glu104del
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5302_*22-5300delCTC
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.302_304delGAG
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2689
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4367
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 11286
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 17143
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6378
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23201
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu313del
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: ACTC
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-3724451-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724451
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724451
    reference: chr 16
allele count: 2
allele frequency: 1.655683963045134e-5
allele num: 120796
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.298T>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.382T>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.306T>G
  hgvsp: ENSP00000459354.1:p.His102Gln
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.774T>G
  hgvsp: ENSP00000442070.1:p.His258Gln
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.306T>G
  hgvsp: ENSP00000458166.1:p.His102Gln
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5299A>C
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.933T>G
  hgvsp: ENSP00000246957.5:p.His311Gln
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*79T>G
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11965
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11291
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6372
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
hgvs: p.His311Gln
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: A
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

16-3724451-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724451
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724451
    reference: chr 16
allele count: 80
allele frequency: 6.622735852180536e-4
allele num: 120796
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.306T>C
  hgvsp: ENST00000576335.1:c.306T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.933T>C
  hgvsp: ENST00000246957.5:c.933T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.306T>C
  hgvsp: ENST00000575671.1:c.306T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.774T>C
  hgvsp: ENST00000538171.1:c.774T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.382T>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5299A>G
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*79T>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.298T>C
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11965
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 11291
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4372
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17128
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6372
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14191
  bin: 9.75e1
  variant carriers: 80
genotype quality: GenotypeQuality
  all individuals: 23113
  bin: 6.25e1
  variant carriers: 0
hgvs: p.His311His
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

16-3724451-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724451
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724451
    reference: chr 16
allele count: 3
allele frequency: 2.483525944567701e-5
allele num: 120796
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.382T>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.306T>A
  hgvsp: ENSP00000458166.1:p.His102Gln
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5299A>T
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.774T>A
  hgvsp: ENSP00000442070.1:p.His258Gln
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.298T>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.933T>A
  hgvsp: ENSP00000246957.5:p.His311Gln
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.306T>A
  hgvsp: ENSP00000459354.1:p.His102Gln
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*79T>A
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6372
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11291
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17128
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11965
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14191
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1829
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6691
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
hgvs: p.His311Gln
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

16-3724452-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724452
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724452
    reference: chr 16
allele count: 1
allele frequency: 8.279105194310599e-6
allele num: 120786
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.773A>G
  hgvsp: ENSP00000442070.1:p.His258Arg
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.932A>G
  hgvsp: ENSP00000246957.5:p.His311Arg
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*78A>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.305A>G
  hgvsp: ENSP00000459354.1:p.His102Arg
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.381A>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.305A>G
  hgvsp: ENSP00000458166.1:p.His102Arg
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.297A>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5298T>C
  variant of: http://identifiers.org/hgnc/2956
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11285
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6372
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6708
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14124
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His311Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

16-3724453-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724453
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724453
    reference: chr 16
allele count: 10
allele frequency: 8.279516476237788e-5
allele num: 120780
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.772C>G
  hgvsp: ENSP00000442070.1:p.His258Asp
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.296C>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.931C>G
  hgvsp: ENSP00000246957.5:p.His311Asp
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.304C>G
  hgvsp: ENSP00000458166.1:p.His102Asp
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*77C>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5297G>C
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.304C>G
  hgvsp: ENSP00000459354.1:p.His102Asp
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.380C>G
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6375
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11287
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17111
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4370
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3397
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 3.75e1
  variant carriers: 0
hgvs: p.His311Asp
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

16-3724459-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724459
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724459
    reference: chr 16
allele count: 1
allele frequency: 8.285004142502071e-6
allele num: 120700
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.298T>C
  hgvsp: ENSP00000458166.1:p.Trp100Arg
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.374T>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.766T>C
  hgvsp: ENSP00000442070.1:p.Trp256Arg
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.298T>C
  hgvsp: ENSP00000459354.1:p.Trp100Arg
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.925T>C
  hgvsp: ENSP00000246957.5:p.Trp309Arg
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.290T>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5291A>G
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*71T>C
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 16989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4375
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3413
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3024
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6613
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Trp309Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS

16-3724464-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724464
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724464
    reference: chr 16
allele count: 6
allele frequency: 4.973145016908693e-5
allele num: 120648
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.761G>A
  hgvsp: ENSP00000442070.1:p.Arg254His
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.293G>A
  hgvsp: ENSP00000459354.1:p.Arg98His
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*66G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.285G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.920G>A
  hgvsp: ENSP00000246957.5:p.Arg307His
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.293G>A
  hgvsp: ENSP00000458166.1:p.Arg98His
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.369G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5286C>T
  variant of: http://identifiers.org/hgnc/2956
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11291
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17011
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4378
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3976
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1835
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3017
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg307His
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum

16-3724464-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724464
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724464
    reference: chr 16
allele count: 1
allele frequency: 8.288575028181154e-6
allele num: 120648
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.761G>C
  hgvsp: ENSP00000442070.1:p.Arg254Pro
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.293G>C
  hgvsp: ENSP00000459354.1:p.Arg98Pro
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.293G>C
  hgvsp: ENSP00000458166.1:p.Arg98Pro
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.369G>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.285G>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.920G>C
  hgvsp: ENSP00000246957.5:p.Arg307Pro
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5286C>G
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*66G>C
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11291
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6604
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2558
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg307Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

16-3724465-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724465
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724465
    reference: chr 16
allele count: 52591
allele frequency: 4.371872246329825e-1
allele num: 120294
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.292C>G
  hgvsp: ENSP00000458166.1:p.Arg98Gly
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.760C>G
  hgvsp: ENSP00000442070.1:p.Arg254Gly
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.284C>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.919C>G
  hgvsp: ENSP00000246957.5:p.Arg307Gly
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.368C>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.292C>G
  hgvsp: ENSP00000459354.1:p.Arg98Gly
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*65C>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5285G>C
  variant of: http://identifiers.org/hgnc/2956
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4919
  bin: 4.75e1
  variant carriers: 4861
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 5.25e1
  variant carriers: 3866
genotype depth: GenotypeDepth
  all individuals: 7811
  bin: 3.25e1
  variant carriers: 4087
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 5.75e1
  variant carriers: 2955
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 7.25e1
  variant carriers: 1115
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.5e0
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 1.75e1
  variant carriers: 772
genotype depth: GenotypeDepth
  all individuals: 12091
  bin: 2.75e1
  variant carriers: 2899
genotype depth: GenotypeDepth
  all individuals: 7096
  bin: 2.25e1
  variant carriers: 1534
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 6.75e1
  variant carriers: 1534
genotype depth: GenotypeDepth
  all individuals: 5626
  bin: 3.75e1
  variant carriers: 5002
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 369
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 1.25e1
  variant carriers: 283
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 6.25e1
  variant carriers: 2182
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 488
genotype depth: GenotypeDepth
  all individuals: 5393
  bin: 4.25e1
  variant carriers: 5223
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 9.75e1
  variant carriers: 1878
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 8.25e1
  variant carriers: 620
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 7.75e1
  variant carriers: 887
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 4.75e1
  variant carriers: 182
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.75e1
  variant carriers: 54
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 7.25e1
  variant carriers: 242
genotype quality: GenotypeQuality
  all individuals: 904
  bin: 7.75e1
  variant carriers: 440
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 3.25e1
  variant carriers: 71
genotype quality: GenotypeQuality
  all individuals: 15190
  bin: 6.25e1
  variant carriers: 263
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 4.25e1
  variant carriers: 115
hgvs: p.Arg307Gly
num of homozygotes: 12173
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

16-3724465-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724465
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724465
    reference: chr 16
allele count: 1
allele frequency: 8.312966565248474e-6
allele num: 120294
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.284C>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.292C>A
  hgvsp: ENSP00000458166.1:p.Arg98Ser
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.292C>A
  hgvsp: ENSP00000459354.1:p.Arg98Ser
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.368C>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.760C>A
  hgvsp: ENSP00000442070.1:p.Arg254Ser
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5285G>T
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.919C>A
  hgvsp: ENSP00000246957.5:p.Arg307Ser
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*65C>A
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7811
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5626
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4919
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7096
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5393
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36978
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Arg307Ser
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum

16-3724466-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724466
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724466
    reference: chr 16
allele count: 2
allele frequency: 1.671486118307788e-5
allele num: 119654
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.291C>T
  hgvsp: ENST00000575671.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.367C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.291C>T
  hgvsp: ENST00000576335.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*64C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.283C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.918C>T
  hgvsp: ENST00000246957.5:c.918C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.759C>T
  hgvsp: ENST00000538171.1:c.759C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5284G>A
  variant of: http://identifiers.org/hgnc/2956
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13233
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28776
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13606
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2211
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1501
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val306Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

16-3724468-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724468
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724468
    reference: chr 16
allele count: 1
allele frequency: 8.361064196250898e-6
allele num: 119602
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.289G>A
  hgvsp: ENSP00000458166.1:p.Val97Ile
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.365G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.916G>A
  hgvsp: ENSP00000246957.5:p.Val306Ile
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5282C>T
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.289G>A
  hgvsp: ENSP00000459354.1:p.Val97Ile
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*62G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.757G>A
  hgvsp: ENSP00000442070.1:p.Val253Ile
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.281G>A
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28740
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13546
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43556
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2192
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val306Ile
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum

16-3724471-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724471
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724471
    reference: chr 16
allele count: 1
allele frequency: 8.375069094320028e-6
allele num: 119402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.362G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.286G>A
  hgvsp: ENSP00000459354.1:p.Asp96Asn
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*59G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.754G>A
  hgvsp: ENSP00000442070.1:p.Asp252Asn
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.278G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.913G>A
  hgvsp: ENSP00000246957.5:p.Asp305Asn
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.286G>A
  hgvsp: ENSP00000458166.1:p.Asp96Asn
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5279C>T
  variant of: http://identifiers.org/hgnc/2956
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 13503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28612
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1727
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp305Asn
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD

16-3724474-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724474
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724474
    reference: chr 16
allele count: 1
allele frequency: 8.386025527061704e-6
allele num: 119246
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*56A>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.910A>G
  hgvsp: ENSP00000246957.5:p.Lys304Glu
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5276T>C
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.359A>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.751A>G
  hgvsp: ENSP00000442070.1:p.Lys251Glu
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.283A>G
  hgvsp: ENSP00000458166.1:p.Lys95Glu
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.283A>G
  hgvsp: ENSP00000459354.1:p.Lys95Glu
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.275A>G
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28522
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Lys304Glu
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/16-3724485-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724485
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724485
    reference: chr 16
allele count: 1
allele frequency: 8.448657508321927e-6
allele num: 118362
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5265A>C
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.272T>G
  hgvsp: ENSP00000459354.1:p.Met91Arg
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*45T>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.899T>G
  hgvsp: ENSP00000246957.5:p.Met300Arg
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.272T>G
  hgvsp: ENSP00000458166.1:p.Met91Arg
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.348T>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.740T>G
  hgvsp: ENSP00000442070.1:p.Met247Arg
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.264T>G
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13170
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13023
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2013
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Met300Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/16-3724495-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724495
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724495
    reference: chr 16
allele count: 1
allele frequency: 8.608222574202878e-6
allele num: 116168
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262G>T
  hgvsp: ENSP00000459354.1:p.Ala88Ser
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889G>T
  hgvsp: ENSP00000246957.5:p.Ala297Ser
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5255C>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262G>T
  hgvsp: ENSP00000458166.1:p.Ala88Ser
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730G>T
  hgvsp: ENSP00000442070.1:p.Ala244Ser
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*35G>T
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27263
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2789
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12880
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11889
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala297Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

16-3724499-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724499
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724499
    reference: chr 16
allele count: 7
allele frequency: 6.10830904553308e-5
allele num: 114598
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-4C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-4C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*31C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-4C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-4C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-4C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5251G>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-4C>T
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26644
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12561
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3606
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11098
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8177
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
hgvs: c.889-4C>T
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

16-3724503-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724503
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724503
    reference: chr 16
allele count: 1
allele frequency: 9.14561650600867e-6
allele num: 109342
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-8G>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-8G>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5247C>G
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-8G>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*27G>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-8G>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-8G>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-8G>C
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23477
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6234
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5696
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9695
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10442
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1135
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 7.5e0
  variant carriers: 0
hgvs: c.889-8G>C
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

16-3724503-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724503
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724503
    reference: chr 16
allele count: 25
allele frequency: 2.286404126502168e-4
allele num: 109342
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-8G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-8G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*27G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-8G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5247C>T
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-8G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-8G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-8G>A
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23477
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9695
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5696
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11311
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6234
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 3.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1122
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 3.75e1
  variant carriers: 0
hgvs: c.889-8G>A
num of homozygotes: 1
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff

16-3724504-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724504
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724504
    reference: chr 16
allele count: 225
allele frequency: 2.057914281010481e-3
allele num: 109334
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-9C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*26C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5246G>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-9C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-9C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-9C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-9C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-9C>T
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 4.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 3.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 6251
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 11203
  bin: 3.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5708
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 9738
  bin: 2.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 23545
  bin: 2.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1135
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6963
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 9.75e1
  variant carriers: 218
num of homozygotes: 3
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

16-3724510-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724510
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724510
    reference: chr 16
allele count: 139
allele frequency: 1.327044985870312e-3
allele num: 104744
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*20G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-15G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-15G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5240C>T
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-15G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-15G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-15G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-15G>A
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7788
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 21155
  bin: 2.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 9308
  bin: 2.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8413
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 3.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 9505
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1501
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5924
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1277
  bin: 7.25e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS

16-3724511-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724511
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724511
    reference: chr 16
allele count: 5
allele frequency: 5.060114156175363e-5
allele num: 98812
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-16C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-16C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5239G>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-16C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-16C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-16C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*19C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-16C>T
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6966
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3017
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8926
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18431
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10499
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26806
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18713
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3589
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/16-3724513-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724513
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724513
    reference: chr 16
allele count: 5
allele frequency: 5.071714036475767e-5
allele num: 98586
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-18G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-18G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-18G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-18G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*17G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-18G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5237C>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-18G>T
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9167
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10574
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11196
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18495
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6723
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27882
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3503
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD

16-3724513-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724513
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724513
    reference: chr 16
allele count: 1
allele frequency: 1.014342807295153e-5
allele num: 98586
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-18G>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-18G>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-18G>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5237C>G
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-18G>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*17G>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-18G>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-18G>C
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6723
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11196
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10574
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18495
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3503
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

16-3724514-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724514
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724514
    reference: chr 16
allele count: 56
allele frequency: 5.681587597905929e-4
allele num: 98564
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*16C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-19C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5236G>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-19C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-19C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-19C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-19C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-19C>T
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2894
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18540
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6565
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11209
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9265
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10672
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1995
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 9.75e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 8.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-3724516-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724516
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724516
    reference: chr 16
allele count: 1
allele frequency: 1.058716412221822e-5
allele num: 94454
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-21C>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5234G>T
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-21C>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*14C>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-21C>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-21C>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-21C>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-21C>A
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9122
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12617
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16183
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4939
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13019
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3388
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22180
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

16-3724519-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724519
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724519
    reference: chr 16
allele count: 1
allele frequency: 1.088897600069689e-5
allele num: 91836
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*11C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5231G>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-24C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-24C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-24C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-24C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-24C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-24C>T
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13887
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13829
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9370
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14924
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3430
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1383
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2302
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24009
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23177
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS

16-3724521-GCGT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724521
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724518
    reference: chr 16
allele count: 1
allele frequency: 1.11002575259746e-5
allele num: 90088
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-29_262-27delACG
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5225_*22-5223delCGT
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*6_*8delACG
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-29_889-27delACG
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-29_254-27delACG
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-29_730-27delACG
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-29_262-27delACG
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-29_338-27delACG
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13877
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9337
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3516
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14523
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14615
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1433
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21901
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2478
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: GCGT
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD

16-3724522-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724522
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724522
    reference: chr 16
allele count: 5
allele frequency: 5.636851480237199e-5
allele num: 88702
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5228C>T
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-27G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-27G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-27G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-27G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*8G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-27G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-27G>A
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3200
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13320
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14998
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14854
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3592
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1419
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2379
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1024
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25725
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

16-3724523-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724523
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724523
    reference: chr 16
allele count: 2
allele frequency: 2.281438218653039e-5
allele num: 87664
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5227G>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-28C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-28C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-28C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-28C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-28C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-28C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*7C>T
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9364
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12721
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2899
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15486
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD

16-3724523-GTCGTGTTCACCACGCACGT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724523
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724504
    reference: chr 16
allele count: 1
allele frequency: 1.140719109326519e-5
allele num: 87664
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: coding_sequence_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: coding sequence
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2899
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15486
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9364
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12721
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2493
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2502
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2290
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26463
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: GTCGTGTTCACCACGCACGT
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

16-3724525-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724525
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724525
    reference: chr 16
allele count: 1
allele frequency: 1.16346713205352e-5
allele num: 85950
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-30G>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5225C>G
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-30G>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-30G>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*5G>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-30G>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-30G>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-30G>C
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15815
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8951
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2566
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19634
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1414
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27680
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-3724525-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724525
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724525
    reference: chr 16
allele count: 1
allele frequency: 1.16346713205352e-5
allele num: 85950
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*5G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-30G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-30G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-30G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5225C>T
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-30G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-30G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-30G>A
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15815
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8951
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1414
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

16-3724526-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724526
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724526
    reference: chr 16
allele count: 5
allele frequency: 5.931198102016607e-5
allele num: 84300
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-31C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.*4C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-31C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-31C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-31C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-31C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-31C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5224G>A
  variant of: http://identifiers.org/hgnc/2956
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3555
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11270
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8599
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16850
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1309
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2564
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

16-3724534-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724534
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724534
    reference: chr 16
allele count: 2
allele frequency: 2.704456945045435e-5
allele num: 73952
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-39G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-39G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-39G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-39G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-39G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.322G>A
  hgvsp: ENSP00000459585.1:p.Trp108Ter
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5216C>T
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-39G>A
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3864
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6887
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20961
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34147
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2396
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1017
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Trp108Ter
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

16-3724536-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724536
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724536
    reference: chr 16
allele count: 27
allele frequency: 3.797254725472547e-4
allele num: 71104
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-41G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-41G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-41G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-41G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5214C>T
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-41G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.320G>A
  hgvsp: ENST00000574175.1:c.320G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-41G>A
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 5148
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 21927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19381
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1242
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9636
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1191
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 9.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala107Ala
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

16-3724537-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724537
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724537
    reference: chr 16
allele count: 2
allele frequency: 2.833182230281052e-5
allele num: 70592
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-42C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5213G>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-42C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.319C>T
  hgvsp: ENSP00000459585.1:p.Ala107Val
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-42C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-42C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-42C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-42C>T
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2557
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala107Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-3724540-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724540
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724540
    reference: chr 16
allele count: 1
allele frequency: 1.476232654266312e-5
allele num: 67740
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-45G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-45G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5210C>T
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.316G>A
  hgvsp: ENSP00000459585.1:p.Arg106His
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-45G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-45G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-45G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-45G>A
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3020
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4984
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19460
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4893
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2799
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9079
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg106His
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

16-3724541-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724541
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724541
    reference: chr 16
allele count: 6
allele frequency: 9.007386056566384e-5
allele num: 66612
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5209G>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-46C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-46C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-46C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.315C>T
  hgvsp: ENSP00000459585.1:p.Arg106Cys
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-46C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-46C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-46C>T
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23533
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4718
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19543
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36507
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8640
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg106Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/16-3724553-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724553
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724553
    reference: chr 16
allele count: 1
allele frequency: 1.881821603312006e-5
allele num: 53140
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-58T>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-58T>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-58T>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-58T>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.303T>G
  hgvsp: ENSP00000459585.1:p.Trp102Gly
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-58T>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-58T>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5197A>C
  variant of: http://identifiers.org/hgnc/2956
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 26526
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2589
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6402
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18548
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36817
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2336
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Trp102Gly
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD

16-3724555-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724555
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724555
    reference: chr 16
allele count: 5
allele frequency: 9.694055605102951e-5
allele num: 51578
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-60G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-60G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-60G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.301G>A
  hgvsp: ENSP00000459585.1:p.Arg101Gln
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-60G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5195C>T
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-60G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-60G>A
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6946
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17992
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 27002
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37543
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 909
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2654
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1724
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4804
  bin: 6.25e1
  variant carriers: 1
hgvs: p.Arg101Gln
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

16-3724556-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724556
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724556
    reference: chr 16
allele count: 3
allele frequency: 6.096569663469354e-5
allele num: 49208
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-61C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-61C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-61C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.300C>T
  hgvsp: ENSP00000459585.1:p.Arg101Trp
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-61C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5194G>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-61C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-61C>T
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7648
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27260
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17568
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2571
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4283
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2121
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8240
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2011
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg101Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ

16-3724557-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724557
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724558
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 49434
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-63_254-62insT
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-63_338-62insT
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-63_262-62insT
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5193_*22-5192insA
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-63_730-62insT
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.298_299insT
  hgvsp: ENSP00000459585.1:p.Arg101ThrfsTer25
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-63_262-62insT
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-63_889-62insT
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: frameshift
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7725
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27540
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37602
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8246
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg101ThrfsTer25
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ

16-3724578-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724578
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724578
    reference: chr 16
allele count: 3
allele frequency: 1.040943789035392e-4
allele num: 28820
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-83G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-83G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-83G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.278G>A
  hgvsp: ENST00000574175.1:c.278G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-83G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5172C>T
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-83G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-83G>A
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26399
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18401
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11445
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2363
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30536
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2108
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1455
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala93Ala
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

16-3724579-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724579
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724579
    reference: chr 16
allele count: 3
allele frequency: 1.106276274061509e-4
allele num: 27118
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.277C>T
  hgvsp: ENSP00000459585.1:p.Ala93Val
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-84C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-84C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-84C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5171G>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-84C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-84C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-84C>T
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19702
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25852
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10840
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1401
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala93Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

16-3724583-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724583
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724583
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 25198
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5167G>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-88C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-88C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-88C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.273C>T
  hgvsp: ENSP00000459585.1:p.Gln92Ter
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-88C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-88C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-88C>T
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: stop gained
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 10115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25039
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21403
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1428
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22085
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2463
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1662
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27934
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln92Ter
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

16-3724583-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724583
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724583
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 25198
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-88C>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5167G>C
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-88C>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-88C>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-88C>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-88C>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-88C>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.273C>G
  hgvsp: ENSP00000459585.1:p.Gln92Glu
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 21403
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25039
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22085
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2463
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1428
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27934
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1312
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln92Glu
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD

16-3724585-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724585
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724585
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 23082
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-90G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5165C>T
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-90G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-90G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-90G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-90G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.271G>A
  hgvsp: ENSP00000459585.1:p.Gly91Asp
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-90G>A
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 9504
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24313
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22752
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1143
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2620
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly91Asp
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

16-3724592-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724592
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724592
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 19376
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-97G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-97G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-97G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-97G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-97G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.264G>A
  hgvsp: ENSP00000459585.1:p.Val89Ile
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5158C>T
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-97G>A
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21903
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26607
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8007
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1389
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val89Ile
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-3724601-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724601
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724601
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 12900
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5149G>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-106C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-106C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.258-3C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-106C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-106C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-106C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-106C>T
  variant of: http://identifiers.org/hgnc/16264
canonical: false
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5571
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15823
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33675
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1730
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1838
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34009
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 2.75e1
  variant carriers: 0
hgvs: c.258-3C>T
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

16-3724609-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724609
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724609
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 9180
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-114G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-114G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-114G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5141C>T
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.258-11G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-114G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-114G>A
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-114G>A
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13373
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36353
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35823
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2412
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11180
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum

16-3724610-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724610
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724610
    reference: chr 16
allele count: 8
allele frequency: 9.132420091324201e-4
allele num: 8760
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5140G>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-115C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.258-12C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-115C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-115C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-115C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-115C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-115C>T
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3796
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13043
  bin: 7.5e0
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36695
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1859
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36124
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/16-3724626-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724626
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724626
    reference: chr 16
allele count: 1
allele frequency: 2.178649237472767e-4
allele num: 4590
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-131G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-131G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-131G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-131G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-131G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.258-28G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-131G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5124C>A
  variant of: http://identifiers.org/hgnc/2956
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38341
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8649
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4721
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5239
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

16-3724627-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724627
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724627
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 4352
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.258-29C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-132C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-132C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-132C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5123G>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-132C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-132C>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-132C>T
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8471
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38355
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34549
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2527
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/16-3724645-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3724645
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3724645
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 2574
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.258-47G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.889-150G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.262-150G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.730-150G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.254-150G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-5105C>A
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.338-150G>T
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.262-150G>T
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36845
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7824
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2115
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3340
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1891
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

16-3725282-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3725282
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3725282
    reference: chr 16
allele count: 1
allele frequency: 8.32639467110741e-6
allele num: 120100
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.261+43A>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-4468T>G
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.253+43A>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.337+43A>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.888+43A>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.257+43A>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.261+43A>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000575854
  gene symbol: TRAP1
  hgvsc: ENST00000575854.1:n.345+43A>C
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.729+43A>C
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4848
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3440
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10465
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24280
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4260
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP

16-3725283-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3725283
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3725283
    reference: chr 16
allele count: 3
allele frequency: 2.498584135656461e-5
allele num: 120068
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459585
  ensembl transcript: ENST00000574175
  gene symbol: TRAP1
  hgvsc: ENST00000574175.1:c.257+42C>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000458166
  ensembl transcript: ENST00000575671
  gene symbol: TRAP1
  hgvsc: ENST00000575671.1:c.261+42C>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000459354
  ensembl transcript: ENST00000576335
  gene symbol: TRAP1
  hgvsc: ENST00000576335.1:c.261+42C>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000442070
  ensembl transcript: ENST00000538171
  gene symbol: TRAP1
  hgvsc: ENST00000538171.1:c.729+42C>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000213918
  ensembl protein: ENSP00000461153
  ensembl transcript: ENST00000575479
  gene symbol: DNASE1
  hgvsc: ENST00000575479.1:c.*22-4467G>C
  variant of: http://identifiers.org/hgnc/2956
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000575854
  gene symbol: TRAP1
  hgvsc: ENST00000575854.1:n.345+42C>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000573872
  gene symbol: TRAP1
  hgvsc: ENST00000573872.1:n.337+42C>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl transcript: ENST00000570514
  gene symbol: TRAP1
  hgvsc: ENST00000570514.1:n.253+42C>G
  variant of: http://identifiers.org/hgnc/16264
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000126602
  ensembl protein: ENSP00000246957
  ensembl transcript: ENST00000246957
  gene symbol: TRAP1
  hgvsc: ENST00000246957.5:c.888+42C>G
  variant of: http://identifiers.org/hgnc/16264
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13862
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2471
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 80
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3411
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4001
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2545
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14093
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6918
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3068
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24164
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1832
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.927153594141453e-4
allele num: 10378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66448
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.002e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.363e0

VQSLOD
type: SiteQuality
SIO_000300: 7.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.49e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.35e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.121e1

DP
type: SiteQuality
SIO_000300: 2.02199e6

GenotypeQuality
all individuals: 3407
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23975
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14096
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6896
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3063
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.927525057825752e-4
allele num: 10376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.032607713846988e-5
allele num: 66426
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.87e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

MQRankSum
type: SiteQuality
SIO_000300: 5.88e-1

FS
type: SiteQuality
SIO_000300: 1.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.331e1

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.55e-1

DP
type: SiteQuality
SIO_000300: 2.021561e6

GenotypeQuality
all individuals: 1827
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 9

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2544
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.424536307431204e-4
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.021738475897992e-5
allele num: 66426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.35e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.021951e6

MQRankSum
type: SiteQuality
SIO_000300: -5.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.09e0

FS
type: SiteQuality
SIO_000300: 5.21e-1

MQ
type: SiteQuality
SIO_000300: 5.987e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.26e-1

GenotypeQuality
all individuals: 2545
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3983
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
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variant carriers: 0

GenotypeQuality
all individuals: 3065
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 56
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14091
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 9.637625289128758e-5
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.131e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.492e0

DP
type: SiteQuality
SIO_000300: 2.021441e6

QD
type: SiteQuality
SIO_000300: 1.88e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.39e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.681e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.153e0

GenotypeQuality
all individuals: 124
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6898
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14092
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 102
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variant carriers: 0

GenotypeQuality
all individuals: 109
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variant carriers: 0

GenotypeQuality
all individuals: 50
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variant carriers: 0

GenotypeQuality
all individuals: 3069
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variant carriers: 0

GenotypeQuality
all individuals: 24030
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variant carriers: 0

GenotypeQuality
all individuals: 3411
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66434
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.999999999999999e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.312e0

VQSLOD
type: SiteQuality
SIO_000300: -1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.992e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.09e-1

FS
type: SiteQuality
SIO_000300: 1.105e0

DP
type: SiteQuality
SIO_000300: 2.021027e6

QD
type: SiteQuality
SIO_000300: 1.445e1

MQ
type: SiteQuality
SIO_000300: 5.849e1

GenotypeQuality
all individuals: 146
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3971
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
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variant carriers: 0

GenotypeQuality
all individuals: 329
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variant carriers: 0

GenotypeQuality
all individuals: 1828
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 140
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variant carriers: 0

GenotypeQuality
all individuals: 3407
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2544
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505479947007106e-5
allele num: 66424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.313743637204998e-4
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.047e0

MQRankSum
type: SiteQuality
SIO_000300: 3.68e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

DP
type: SiteQuality
SIO_000300: 2.019974e6

QD
type: SiteQuality
SIO_000300: 1.164e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.06e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6853
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 2544
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14095
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 100
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
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variant carriers: 0

GenotypeQuality
all individuals: 76
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variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
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variant carriers: 0

GenotypeQuality
all individuals: 1829
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3405
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.010597302504817e-5
allele num: 66432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.649e0

MQRankSum
type: SiteQuality
SIO_000300: 4.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.383e1

FS
type: SiteQuality
SIO_000300: 1.4113e1

DP
type: SiteQuality
SIO_000300: 2.019917e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.462e0

GenotypeQuality
all individuals: 14087
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2543
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3394
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506296318611797e-5
allele num: 66388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.66183574879227e-5
allele num: 10350
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.87e-1

DP
type: SiteQuality
SIO_000300: 2.017305e6

QD
type: SiteQuality
SIO_000300: 1.087e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.0e-2

MQ
type: SiteQuality
SIO_000300: 5.919e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.24e-1

GenotypeQuality
all individuals: 221
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 21
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 13

GenotypeQuality
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GenotypeQuality
all individuals: 215
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.204746702005903e-4
allele num: 66404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.232142857142857e-3
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21256214380987e-4
allele num: 16494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.976e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.357e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.81e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.1e-1

DP
type: SiteQuality
SIO_000300: 2.016872e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.5e-2

QD
type: SiteQuality
SIO_000300: 1.245e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 135
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GenotypeQuality
all individuals: 14096
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variant carriers: 2

GenotypeQuality
all individuals: 218
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GenotypeQuality
all individuals: 2546
bin: 9.25e1
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GenotypeQuality
all individuals: 209
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506024096385542e-5
allele num: 66400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

DP
type: SiteQuality
SIO_000300: 2.016168e6

QD
type: SiteQuality
SIO_000300: 1.401e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.299e0

FS
type: SiteQuality
SIO_000300: 4.362e0

VQSLOD
type: SiteQuality
SIO_000300: 7.77e-1

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3393
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2546
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66400
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.732501732501733e-4
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.363e0

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

MQRankSum
type: SiteQuality
SIO_000300: -1.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

QD
type: SiteQuality
SIO_000300: 1.371e1

MQ
type: SiteQuality
SIO_000300: 5.956e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.54e-1

DP
type: SiteQuality
SIO_000300: 2.015523e6

GenotypeQuality
all individuals: 142
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 2547
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.667440061871617e-5
allele num: 10344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067224851352991e-5
allele num: 16482
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.71e-1

QD
type: SiteQuality
SIO_000300: 1.524e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e-1

DP
type: SiteQuality
SIO_000300: 2.01433e6

FS
type: SiteQuality
SIO_000300: 3.844e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

MQ
type: SiteQuality
SIO_000300: 5.987e1

MQRankSum
type: SiteQuality
SIO_000300: 5.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 104
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variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.013046491307361e-5
allele num: 66378
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067224851352991e-5
allele num: 16482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.0e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-2

MQ
type: SiteQuality
SIO_000300: 5.955e1

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.81e-1

DP
type: SiteQuality
SIO_000300: 2.014363e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

QD
type: SiteQuality
SIO_000300: 2.587e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.71e-1

GenotypeQuality
all individuals: 3386
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 70

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 215
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variant carriers: 0

GenotypeQuality
all individuals: 1822
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

East Asian
type: Population
allele count: 70
allele frequency: 8.099976857208979e-3
allele num: 8642
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.56e-1

DP
type: SiteQuality
SIO_000300: 2.013129e6

MQRankSum
type: SiteQuality
SIO_000300: -1.509e0

QD
type: SiteQuality
SIO_000300: 1.617e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.65e-1

MQ
type: SiteQuality
SIO_000300: 5.625e1

FS
type: SiteQuality
SIO_000300: 2.604e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e-1

GenotypeQuality
all individuals: 165
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 279
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 6691
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variant carriers: 0

GenotypeQuality
all individuals: 2549
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213592233009709e-4
allele num: 16480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.015017e6

QD
type: SiteQuality
SIO_000300: 1.338e1

FS
type: SiteQuality
SIO_000300: 1.126e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e0

MQRankSum
type: SiteQuality
SIO_000300: 2.45e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.58e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 279
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1829
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.80804580382703e-4
allele num: 66370
num of homozygotes: 0

African
type: Population
allele count: 62
allele frequency: 6.010081426909655e-3
allele num: 10316
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067961165048543e-5
allele num: 16480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.337265787647467e-4
allele num: 11528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.015017e6

FS
type: SiteQuality
SIO_000300: 1.126e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.58e0

MQRankSum
type: SiteQuality
SIO_000300: 2.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.97e-1

QD
type: SiteQuality
SIO_000300: 1.338e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.520114509567576e-5
allele num: 66370
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.97e-1

QD
type: SiteQuality
SIO_000300: 1.338e1

FS
type: SiteQuality
SIO_000300: 1.126e0

DP
type: SiteQuality
SIO_000300: 2.015017e6

MQRankSum
type: SiteQuality
SIO_000300: 2.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.58e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 266
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66360
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.693679720822024e-5
allele num: 10316
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.820000000000001e-1

FS
type: SiteQuality
SIO_000300: 3.016e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.06e-1

QD
type: SiteQuality
SIO_000300: 9.880000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.498e0

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

DP
type: SiteQuality
SIO_000300: 2.011043e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 79
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 14129
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GenotypeQuality
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GenotypeQuality
all individuals: 277
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GenotypeQuality
all individuals: 3018
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GenotypeQuality
all individuals: 1829
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GenotypeQuality
all individuals: 3955
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66356
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.068697657482705e-4
allele num: 16478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.609e1

FS
type: SiteQuality
SIO_000300: 1.827e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.76e-1

DP
type: SiteQuality
SIO_000300: 2.010861e6

GenotypeQuality
all individuals: 35
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3976
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14130
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.710623422023694e-5
allele num: 10298
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66322
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.16e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.82e-1

QD
type: SiteQuality
SIO_000300: 2.83e1

MQRankSum
type: SiteQuality
SIO_000300: 4.75e-1

DP
type: SiteQuality
SIO_000300: 2.009147e6

VQSLOD
type: SiteQuality
SIO_000300: -2.769e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 7.96e-1

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2558
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variant carriers: 0

GenotypeQuality
all individuals: 22239
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073858114674441e-5
allele num: 16464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.859086491739553e-4
allele num: 10290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.19e-1

FS
type: SiteQuality
SIO_000300: 5.51e-1

DP
type: SiteQuality
SIO_000300: 2.009646e6

VQSLOD
type: SiteQuality
SIO_000300: 2.25e0

QD
type: SiteQuality
SIO_000300: 1.34e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.23e-1

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14148
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3976
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variant carriers: 0

GenotypeQuality
all individuals: 1835
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.718172983479106e-5
allele num: 10290
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66296
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 5.51e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

VQSLOD
type: SiteQuality
SIO_000300: 2.25e0

DP
type: SiteQuality
SIO_000300: 2.009646e6

QD
type: SiteQuality
SIO_000300: 1.34e1

GenotypeQuality
all individuals: 2896
bin: 6.75e1
variant carriers: 310

GenotypeQuality
all individuals: 82
bin: 2.5e0
variant carriers: 28

GenotypeQuality
all individuals: 55
bin: 1.25e1
variant carriers: 39

GenotypeQuality
all individuals: 36978
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variant carriers: 36922

GenotypeQuality
all individuals: 196
bin: 3.75e1
variant carriers: 114

GenotypeQuality
all individuals: 456
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variant carriers: 50

GenotypeQuality
all individuals: 656
bin: 8.25e1
variant carriers: 474

GenotypeQuality
all individuals: 73
bin: 1.75e1
variant carriers: 49

GenotypeQuality
all individuals: 58
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variant carriers: 30

GenotypeQuality
all individuals: 347
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variant carriers: 308

GenotypeQuality
all individuals: 580
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variant carriers: 554

GenotypeQuality
all individuals: 340
bin: 5.25e1
variant carriers: 210

GenotypeQuality
all individuals: 300
bin: 5.75e1
variant carriers: 171

Other
type: Population
allele count: 402
allele frequency: 4.547511312217195e-1
allele num: 884
num of homozygotes: 96

Latino
type: Population
allele count: 5399
allele frequency: 4.719405594405595e-1
allele num: 11440
num of homozygotes: 1288

African
type: Population
allele count: 1410
allele frequency: 1.374001169362697e-1
allele num: 10262
num of homozygotes: 110

East Asian
type: Population
allele count: 4589
allele frequency: 5.347238405965975e-1
allele num: 8582
num of homozygotes: 1215

European (Non-Finnish)
type: Population
allele count: 28937
allele frequency: 4.374848814707305e-1
allele num: 66144
num of homozygotes: 6375

South Asian
type: Population
allele count: 8504
allele frequency: 5.168348122037194e-1
allele num: 16454
num of homozygotes: 2209

European (Finnish)
type: Population
allele count: 3350
allele frequency: 5.131740196078431e-1
allele num: 6528
num of homozygotes: 880

QD
type: SiteQuality
SIO_000300: 1.794e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.83e-2

FS
type: SiteQuality
SIO_000300: 1.188e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.21e0

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.93e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

DP
type: SiteQuality
SIO_000300: 2.57154e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.68e-1

GenotypeQuality
all individuals: 456
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 7.5e0
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GenotypeQuality
all individuals: 2896
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 904
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 840
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 176
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variant carriers: 0

GenotypeQuality
all individuals: 196
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variant carriers: 0

GenotypeQuality
all individuals: 580
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variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511852926947267e-5
allele num: 66144
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

DP
type: SiteQuality
SIO_000300: 2.57154e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.83e-2

FS
type: SiteQuality
SIO_000300: 1.188e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.68e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.93e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.794e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.21e0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 157
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variant carriers: 0

GenotypeQuality
all individuals: 192
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GenotypeQuality
all individuals: 37
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GenotypeQuality
all individuals: 95
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2212
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 244
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 162
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518925815663163e-5
allele num: 65836
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.796238244514106e-5
allele num: 10208
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e-1

DP
type: SiteQuality
SIO_000300: 1.638736e6

QD
type: SiteQuality
SIO_000300: 1.154e1

VQSLOD
type: SiteQuality
SIO_000300: 6.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.57e-1

FS
type: SiteQuality
SIO_000300: 5.600000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.944e1

MQRankSum
type: SiteQuality
SIO_000300: 4.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.88e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 153
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 36
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GenotypeQuality
all individuals: 1567
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GenotypeQuality
all individuals: 81
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GenotypeQuality
all individuals: 146
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 216
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GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16288
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519618271890101e-5
allele num: 65806
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10196
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.636918e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.215e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.68e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.89e-1

QD
type: SiteQuality
SIO_000300: 2.053e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.983e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 230
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GenotypeQuality
all individuals: 152
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10182
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16262
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521931026085898e-5
allele num: 65706
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.411e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.92e-1

DP
type: SiteQuality
SIO_000300: 1.63324e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.747e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.92e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.099e1

GenotypeQuality
all individuals: 151
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 43520
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GenotypeQuality
all individuals: 232
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GenotypeQuality
all individuals: 137
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GenotypeQuality
all individuals: 149
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GenotypeQuality
all individuals: 44
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GenotypeQuality
all individuals: 264
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GenotypeQuality
all individuals: 2152
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GenotypeQuality
all individuals: 1713
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GenotypeQuality
all individuals: 632
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GenotypeQuality
all individuals: 8999
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6404
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10154
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16246
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523879186858066e-5
allele num: 65622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

FS
type: SiteQuality
SIO_000300: 1.4801e1

MQ
type: SiteQuality
SIO_000300: 5.949e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.88e-1

QD
type: SiteQuality
SIO_000300: 2.086e1

DP
type: SiteQuality
SIO_000300: 1.629878e6

MQRankSum
type: SiteQuality
SIO_000300: -3.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.659e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6330
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16122
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11254
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.534542552864991e-5
allele num: 65166
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.023e0

MQRankSum
type: SiteQuality
SIO_000300: 1.91e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e0

QD
type: SiteQuality
SIO_000300: 1.868e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.73e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.611401e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.79e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64036
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9872
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.329113924050633e-5
allele num: 15800
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

MQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.17e0

QD
type: SiteQuality
SIO_000300: 1.693e1

DP
type: SiteQuality
SIO_000300: 1.575047e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.829e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5976
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8382
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.150805270863836e-5
allele num: 10928
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9756
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.499081755430309e-5
allele num: 63164
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15562
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.326e0

DP
type: SiteQuality
SIO_000300: 1.546336e6

VQSLOD
type: SiteQuality
SIO_000300: -4.457e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.954e1

FS
type: SiteQuality
SIO_000300: 2.727e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.5e-2

QD
type: SiteQuality
SIO_000300: 2.813e1

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 198
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GenotypeQuality
all individuals: 1482
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.05241001894338e-4
allele num: 9502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60088
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8058
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14914
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10422
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-2

FS
type: SiteQuality
SIO_000300: 4.585e0

QD
type: SiteQuality
SIO_000300: 1.315e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.02e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.69e-1

DP
type: SiteQuality
SIO_000300: 1.447769e6

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1482
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 7
allele frequency: 8.905852417302799e-3
allele num: 786
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8058
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.341021858656296e-4
allele num: 14914
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.662761283450939e-4
allele num: 60088
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.43e-1

FS
type: SiteQuality
SIO_000300: 4.585e0

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.69e-1

QD
type: SiteQuality
SIO_000300: 1.315e1

DP
type: SiteQuality
SIO_000300: 1.447769e6

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.02e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 2.16421389092362e-4
allele num: 60068
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.802151363810987e-4
allele num: 10412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8054
num of homozygotes: 0

African
type: Population
allele count: 77
allele frequency: 8.096740273396425e-3
allele num: 9510
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5578
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.272264631043257e-3
allele num: 786
num of homozygotes: 0

South Asian
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allele count: 129
allele frequency: 8.642637009245611e-3
allele num: 14926
num of homozygotes: 2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e-1

FS
type: SiteQuality
SIO_000300: 1.65e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.63e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.999999999999999e-3

DP
type: SiteQuality
SIO_000300: 1.44769e6

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.394e1

VQSLOD
type: SiteQuality
SIO_000300: 4.33e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7754
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 9.116693679092383e-4
allele num: 9872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.736714136853074e-5
allele num: 57580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5200
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.392757660167131e-4
allele num: 14360
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African
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allele count: 127
allele frequency: 1.375351960147282e-2
allele num: 9234
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.34e0

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 4.6e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.199e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.793e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1615
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GenotypeQuality
all individuals: 35
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.510599909788002e-4
allele num: 8868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4842
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.378984651711924e-5
allele num: 13552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54306
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9176
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.68e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.474e1

MQRankSum
type: SiteQuality
SIO_000300: -2.4e-2

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.294e0

DP
type: SiteQuality
SIO_000300: 1.225739e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.75e-1

GenotypeQuality
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GenotypeQuality
all individuals: 1188
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GenotypeQuality
all individuals: 1902
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GenotypeQuality
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GenotypeQuality
all individuals: 67
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GenotypeQuality
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GenotypeQuality
all individuals: 34
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 18870
bin: 2.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8840
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7350
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 5.462093074065982e-4
allele num: 9154
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13506
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 54194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4834
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 708
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.221059e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.006e0

FS
type: SiteQuality
SIO_000300: 9.959e0

VQSLOD
type: SiteQuality
SIO_000300: -8.693e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.23e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4834
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9154
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8840
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 7.404116688879017e-5
allele num: 13506
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 54194
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 708
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7350
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.006e0

FS
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MQRankSum
type: SiteQuality
SIO_000300: -3.17e-1

DP
type: SiteQuality
SIO_000300: 1.221059e6

VQSLOD
type: SiteQuality
SIO_000300: -8.693e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.05e-1

QD
type: SiteQuality
SIO_000300: 9.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 708
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4846
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8848
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.220577350111029e-4
allele num: 13510
num of homozygotes: 0

East Asian
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allele count: 42
allele frequency: 5.723630417007359e-3
allele num: 7338
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 1.093374152635032e-4
allele num: 9146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.846108403485453e-4
allele num: 54168
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -7.11e-1

MQ
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SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.28e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.218058e6

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.72e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8682
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.757951900698215e-5
allele num: 12890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4610
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 51938
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7028
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.56e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -2.506e0

DP
type: SiteQuality
SIO_000300: 1.134406e6

MQRankSum
type: SiteQuality
SIO_000300: 5.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.94e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.456876456876457e-4
allele num: 6864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4432
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8350
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.333e0

DP
type: SiteQuality
SIO_000300: 1.086501e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.457e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -2.059e-1

QD
type: SiteQuality
SIO_000300: 1.072e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6754
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.196458482890644e-4
allele num: 8358
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12276
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49564
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.06e-1

MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.0478374836173e-5
allele num: 48832
num of homozygotes: 0

Latino
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East Asian
type: Population
allele count: 4
allele frequency: 5.98623166716552e-4
allele num: 6682
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4170
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African
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allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.875e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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FS
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8190
num of homozygotes: 0

Other
type: Population
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South Asian
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East Asian
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allele frequency: 1.516070345664039e-4
allele num: 6596
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 7902
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.073054438409553e-5
allele num: 48238
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 4168
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-1

ReadPosRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 8.369601606963509e-5
allele num: 11948
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 48238
num of homozygotes: 0

African
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele num: 4168
num of homozygotes: 0

East Asian
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FS
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ClippingRankSum
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DP
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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MQ
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 1.234872808100766e-4
allele num: 8098
num of homozygotes: 0

Other
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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FS
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.56e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 7728
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 4044
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 8.557247989046722e-5
allele num: 11686
num of homozygotes: 0

FS
type: SiteQuality
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ClippingRankSum
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MQ
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MQRankSum
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QD
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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DP
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ReadPosRankSum
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SIO_000300: 5.02e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 4.308487720809996e-5
allele num: 46420
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.567889620570712e-4
allele num: 6378
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 1.750087504375219e-4
allele num: 11428
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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MQ
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BaseQRankSum
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QD
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MQRankSum
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ClippingRankSum
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DP
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FS
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.04e-1

VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 532
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 4.903402961655389e-5
allele num: 40788
num of homozygotes: 0

South Asian
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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BaseQRankSum
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SIO_000300: -1.76e0

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
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SIO_000300: 8.3501e5

VQSLOD
type: SiteQuality
SIO_000300: -2.691e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3254
num of homozygotes: 0

East Asian
type: Population
allele count: 16
allele frequency: 2.943340691685063e-3
allele num: 5436
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European (Non-Finnish)
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allele count: 2
allele frequency: 5.099699117752052e-5
allele num: 39218
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 510
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 8.447729672650475e-4
allele num: 9470
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 1.590330788804071e-4
allele num: 6288
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.13e-1

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.607e0

BaseQRankSum
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -8.500000000000001e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 8.3e-2

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 8.02254e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 6924
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 3184
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South Asian
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Other
type: Population
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allele frequency: 0.0e0
allele num: 506
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5388
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6246
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European (Non-Finnish)
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allele count: 2
allele frequency: 5.13347022587269e-5
allele num: 38960
num of homozygotes: 0

MQRankSum
type: SiteQuality
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MQ
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BaseQRankSum
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VQSLOD
type: SiteQuality
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DP
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FS
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QD
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InbreedingCoeff
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SIO_000300: -8.699999999999999e-3

ReadPosRankSum
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SIO_000300: -4.88e-1

ClippingRankSum
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SIO_000300: 1.27e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 5162
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South Asian
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Other
type: Population
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European (Non-Finnish)
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allele frequency: 2.676086491115393e-5
allele num: 37368
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European (Finnish)
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Latino
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African
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allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
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DP
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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FS
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MQ
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MQRankSum
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BaseQRankSum
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QD
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 36750
num of homozygotes: 0

South Asian
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allele num: 8804
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Latino
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East Asian
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European (Finnish)
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African
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Other
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ClippingRankSum
type: SiteQuality
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VQSLOD
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MQ
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MQRankSum
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InbreedingCoeff
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FS
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QD
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DP
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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European (Non-Finnish)
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African
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South Asian
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Other
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East Asian
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MQRankSum
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ClippingRankSum
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FS
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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MQ
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BaseQRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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South Asian
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East Asian
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African
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allele frequency: 5.324813631522897e-4
allele num: 5634
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 28584
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 384
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.508e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.77e-2

MQRankSum
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BaseQRankSum
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SIO_000300: 2.07e0

FS
type: SiteQuality
SIO_000300: 3.584e0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.09e-1

DP
type: SiteQuality
SIO_000300: 6.36753e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e-1

MQ
type: SiteQuality
SIO_000300: 5.899e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

European (Non-Finnish)
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allele count: 1
allele frequency: 3.661662394727206e-5
allele num: 27310
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 374
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South Asian
type: Population
allele count: 1
allele frequency: 1.586797841954935e-4
allele num: 6302
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.822821728034998e-4
allele num: 5486
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1972
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 4162
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.93e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ClippingRankSum
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FS
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ReadPosRankSum
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VQSLOD
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QD
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DP
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1984
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 3646
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 27422
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 4220
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African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 374
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6288
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -1.82e-2

ClippingRankSum
type: SiteQuality
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DP
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SIO_000300: 6.18229e5

VQSLOD
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ReadPosRankSum
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QD
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MQRankSum
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FS
type: SiteQuality
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BaseQRankSum
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SIO_000300: -1.589e0

MQ
type: SiteQuality
SIO_000300: 6.265e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 3266
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1940
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 234
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African
type: Population
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1034
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European (Non-Finnish)
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allele count: 3
allele frequency: 1.840942562592047e-4
allele num: 16296
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.39e0

ClippingRankSum
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SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.51e-1

MQRankSum
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DP
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QD
type: SiteQuality
SIO_000300: 1.074e1

VQSLOD
type: SiteQuality
SIO_000300: -2.058e-1

FS
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SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.75e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 15334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1812
num of homozygotes: 0

African
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allele count: 3
allele frequency: 7.944915254237289e-4
allele num: 3776
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3038
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1982
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 960
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 216
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.001e0

FS
type: SiteQuality
SIO_000300: 2.1e0

DP
type: SiteQuality
SIO_000300: 4.45758e5

ReadPosRankSum
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SIO_000300: 1.29e0

BaseQRankSum
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SIO_000300: -1.38e0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.92e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2764
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 14306
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 1642
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
allele num: 3596
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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MQRankSum
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DP
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FS
type: SiteQuality
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ReadPosRankSum
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele num: 2764
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
allele num: 3596
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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FS
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MQ
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Latino
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Other
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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European (Finnish)
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num of homozygotes: 0

MQ
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ReadPosRankSum
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DP
type: SiteQuality
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MQRankSum
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ClippingRankSum
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QD
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InbreedingCoeff
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FS
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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Other
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African
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European (Non-Finnish)
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South Asian
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European (Finnish)
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VQSLOD
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BaseQRankSum
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FS
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InbreedingCoeff
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MQRankSum
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QD
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DP
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MQ
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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East Asian
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African
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European (Non-Finnish)
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European (Finnish)
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Other
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VQSLOD
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BaseQRankSum
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DP
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QD
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MQ
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SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.65e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 96
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1844
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 9.41e0

VQSLOD
type: SiteQuality
SIO_000300: -1.914e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.32e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.58089e5

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1525
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 2

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 2

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10876
bin: 2.25e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 2
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 116
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.000400160064026e-3
allele num: 4998
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 90
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1782
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 7.009345794392523e-3
allele num: 428
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 2.53289e5

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.01e0

VQSLOD
type: SiteQuality
SIO_000300: 2.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.37e-2

FS
type: SiteQuality
SIO_000300: 2.056e0

QD
type: SiteQuality
SIO_000300: 1.257e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 24
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2479
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34762
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 444
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1130
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.949447077409163e-4
allele num: 2532
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.43e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.82e0

DP
type: SiteQuality
SIO_000300: 1.89841e5

MQRankSum
type: SiteQuality
SIO_000300: 9.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

VQSLOD
type: SiteQuality
SIO_000300: -1.42e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.737e1

GenotypeQuality
all individuals: 4963
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1072
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1072
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.63e-1

QD
type: SiteQuality
SIO_000300: 8.949999999999999e0

DP
type: SiteQuality
SIO_000300: 1.86775e5

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.63e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 55
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 264
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1340
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 122
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.909999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.61618e5

QD
type: SiteQuality
SIO_000300: 9.199999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -5.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.73e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeQuality
all individuals: 1436
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3106
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1189
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.823010411152286e-5
allele num: 11334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66228
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10164
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.91e0

VQSLOD
type: SiteQuality
SIO_000300: 3.53e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-2

QD
type: SiteQuality
SIO_000300: 1.595e1

DP
type: SiteQuality
SIO_000300: 1.831079e6