17-8077932-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8077932
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8077932
    reference: chr 17
allele count: 2
allele frequency: 1.65694591728526e-5
allele num: 120704
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.277A>G
  hgvsp: ENSP00000436674.1:p.Ile93Val
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.88-342A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*1075A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.450A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.639A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.634A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.156-342A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.259A>G
  hgvsp: ENSP00000402732.2:p.Ile87Val
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.277A>G
  hgvsp: ENSP00000314116.5:p.Ile93Val
  variant of: http://identifiers.org/hgnc/28128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6475
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4093
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4083
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2351
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3012
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4544
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4898
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1037
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44621
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Ile93Val
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/17-8077949-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8077949
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8077949
    reference: chr 17
allele count: 1
allele frequency: 8.298479718515568e-6
allele num: 120504
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.275-15T>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.257-15T>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.88-359T>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.156-359T>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.275-15T>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.448-15T>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*1058T>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.632-15T>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.637-15T>G
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6473
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4544
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3012
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4084
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1800
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

17-8077958-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8077958
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8077958
    reference: chr 17
allele count: 2
allele frequency: 1.660660610790973e-5
allele num: 120434
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.632-24T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.257-24T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.156-368T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.448-24T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*1049T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.637-24T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.275-24T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.88-368T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.275-24T>C
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4895
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6472
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3422
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4084
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44614
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2160
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: A
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

17-8077959-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8077959
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8077959
    reference: chr 17
allele count: 1
allele frequency: 8.304406317992327e-6
allele num: 120418
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*1048T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.156-369T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.275-25T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.632-25T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.448-25T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.257-25T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.88-369T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.637-25T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.275-25T>A
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6471
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4894
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/17-8077974-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8077974
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8077975
    reference: chr 17
allele count: 1
allele frequency: 8.318913882603488e-6
allele num: 120208
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.88-385dupT
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.156-385dupT
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.632-41dupT
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.275-41dupT
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*1032dupT
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.275-41dupT
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.257-41dupT
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.637-41dupT
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.448-41dupT
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3028
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3168
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6470
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4074
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1992
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 989
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD

17-8077981-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8077981
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8077981
    reference: chr 17
allele count: 1
allele frequency: 8.324731111185109e-6
allele num: 120124
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.275-47A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.448-47A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.275-47A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*1026A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.257-47A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.637-47A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.88-391A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.632-47A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.156-391A>G
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3126
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4885
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6470
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2760
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5193
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1025
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

17-8077986-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8077986
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8077986
    reference: chr 17
allele count: 1
allele frequency: 8.332777814812346e-6
allele num: 120008
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.156-396C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.632-52C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.448-52C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.637-52C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.275-52C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*1021C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.275-52C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.88-396C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.257-52C>T
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5168
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4881
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6470
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44601
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2084
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

17-8078895-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8078895
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8078895
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 10654
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+180T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+180T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+180T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+623T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+180T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*112T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+180T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+180T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+382T>A
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19345
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31319
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2826
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 2.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/17-8078897-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8078897
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8078897
    reference: chr 17
allele count: 1
allele frequency: 9.132420091324201e-5
allele num: 10950
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+621G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+178G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*110G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+178G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+178G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+178G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+178G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+380G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+178G>T
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1578
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26190
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

17-8078909-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8078909
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8078909
    reference: chr 17
allele count: 1
allele frequency: 7.108330963889678e-5
allele num: 14068
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+166G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+166G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*98G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+609G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+166G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+166G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+166G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+166G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+368G>A
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23572
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27618
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3862
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1754
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1496
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

17-8078912-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8078912
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8078912
    reference: chr 17
allele count: 1
allele frequency: 6.388143605468251e-5
allele num: 15654
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+163T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+163T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*95T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+606T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+163T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+163T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+163T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+365T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+163T>C
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21256
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29568
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26783
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2073
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

17-8078918-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8078918
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8078918
    reference: chr 17
allele count: 1
allele frequency: 5.141916906622789e-5
allele num: 19448
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+600C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+359C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*89C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+157C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+157C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+157C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+157C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+157C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+157C>T
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30682
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 948
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

17-8078929-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8078929
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8078928
    reference: chr 17
allele count: 1
allele frequency: 3.279979008134348e-5
allele num: 30488
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+347delG
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+145delG
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+145delG
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+145delG
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+588delG
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+145delG
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*77delG
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+145delG
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+145delG
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10336
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9534
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33064
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: GC
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD

17-8078949-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8078949
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8078950
    reference: chr 17
allele count: 4
allele frequency: 6.76178240584218e-5
allele num: 59156
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+125dupT
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+327dupT
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+125dupT
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+125dupT
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*57dupT
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+125dupT
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+568dupT
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+125dupT
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+125dupT
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27853
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21574
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2688
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3486
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2958
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27377
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD

17-8078953-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8078953
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8078953
    reference: chr 17
allele count: 1
allele frequency: 1.532895947023116e-5
allele num: 65236
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+324T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*54T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+122T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+122T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+122T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+122T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+565T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+122T>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+122T>A
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3467
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25616
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23738
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22284
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1409
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP

17-8078955-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8078955
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8078955
    reference: chr 17
allele count: 2
allele frequency: 2.932293346626396e-5
allele num: 68206
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+120T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+120T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+563T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*52T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+322T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+120T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+120T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+120T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+120T>C
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24846
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24516
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1379
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24149
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/17-8078957-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8078957
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8078957
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 70100
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+118G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+118G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+561G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+118G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+320G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+118G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+118G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*50G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+118G>T
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23629
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25630
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23419
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1651
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1269
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

17-8078957-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8078957
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8078957
    reference: chr 17
allele count: 1
allele frequency: 1.426533523537803e-5
allele num: 70100
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+118G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+118G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+561G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+118G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+118G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+118G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+320G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+118G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*50G>A
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3389
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25630
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23629
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23419
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2540
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

17-8078964-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8078964
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8078964
    reference: chr 17
allele count: 1
allele frequency: 1.244740969404267e-5
allele num: 80338
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+111C>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+554C>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+313C>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+111C>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+111C>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+111C>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+111C>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*43C>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+111C>A
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29580
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19435
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4706
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28770
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-8078971-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8078971
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8078971
    reference: chr 17
allele count: 2
allele frequency: 2.270508366823332e-5
allele num: 88086
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+104C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+104C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+104C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+547C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+306C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+104C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*36C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+104C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+104C>T
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15884
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32810
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1045
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

17-8078977-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8078977
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8078977
    reference: chr 17
allele count: 1
allele frequency: 1.045893820859306e-5
allele num: 95612
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+98C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+98C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+98C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*30C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+98C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+300C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+98C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+541C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+98C>T
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12415
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35590
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3842
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1181
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34735
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

17-8078980-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8078980
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8078980
    reference: chr 17
allele count: 1
allele frequency: 1.013705295596464e-5
allele num: 98648
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+95C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+297C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+95C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+95C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*27C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+95C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+95C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+538C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+95C>T
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36088
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10914
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 931
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1051
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

17-8078983-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8078983
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8078983
    reference: chr 17
allele count: 16
allele frequency: 1.586357326987904e-4
allele num: 100860
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+535A>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*24A>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+294A>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+92A>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+92A>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+92A>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+92A>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+92A>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+92A>T
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9450
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36757
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10257
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 970
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ

17-8078983-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8078983
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8078983
    reference: chr 17
allele count: 91
allele frequency: 9.022407297243705e-4
allele num: 100860
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+92A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+535A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+92A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+92A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+92A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+294A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+92A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*24A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+92A>G
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9450
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 36757
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 4.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1664
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 970
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

17-8078983-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8078983
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8078983
    reference: chr 17
allele count: 1
allele frequency: 9.914733293674401e-6
allele num: 100860
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+92A>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+535A>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+92A>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+92A>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+92A>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+294A>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+92A>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*24A>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+92A>C
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9450
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10257
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/17-8078990-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8078990
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8078990
    reference: chr 17
allele count: 23
allele frequency: 2.151060566383599e-4
allele num: 106924
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+85G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+85G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+85G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+287G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+85G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*17G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+85G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+85G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+528G>T
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6138
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3067
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7522
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39207
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1846
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 2.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4423
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ

17-8078999-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8078999
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8078999
    reference: chr 17
allele count: 1
allele frequency: 8.712471031033823e-6
allele num: 114778
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+76G>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+76G>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+76G>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+76G>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+519G>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+278G>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*8G>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+76G>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+76G>C
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8920
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3618
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff

17-8079000-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079000
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079000
    reference: chr 17
allele count: 1
allele frequency: 8.670319761392799e-6
allele num: 115336
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+277A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+75A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*7A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+75A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+75A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+518A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+75A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+75A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+75A>G
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41705
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5328
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff

17-8079001-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079001
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079002
    reference: chr 17
allele count: 4
allele frequency: 3.458711629917856e-5
allele num: 115650
alternate allele: AT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+73dupA
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+275dupA
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+73dupA
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+73dupA
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+516dupA
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+73dupA
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+73dupA
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.*5dupA
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+73dupA
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9183
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3697
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3472
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1398
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

17-8079010-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079010
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079010
    reference: chr 17
allele count: 2
allele frequency: 1.694082569584441e-5
allele num: 118058
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+65C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+65C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+65C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+508C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+65C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+65C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.321C>G
  hgvsp: ENST00000532998.1:c.321C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+65C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+267C>G
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43255
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr107Thr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

17-8079262-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079262
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079262
    reference: chr 17
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.155+15C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.155+15C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.444C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+256C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.155+15C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.260C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+15C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.449C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.155+15C>T
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14340
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29590
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8327
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2183
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

17-8079012-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079012
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079012
    reference: chr 17
allele count: 3
allele frequency: 2.582022239818226e-5
allele num: 116188
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+63A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+63A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+63A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+506A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+63A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+265A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.319A>G
  hgvsp: ENSP00000433148.1:p.Thr107Ala
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+63A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+63A>G
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10064
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr107Ala
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: QD

17-8079012-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079012
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079012
    reference: chr 17
allele count: 197
allele frequency: 1.695527937480635e-3
allele num: 116188
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+63A>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+63A>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.319A>C
  hgvsp: ENSP00000433148.1:p.Thr107Pro
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+63A>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+63A>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+63A>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+265A>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+63A>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+506A>C
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 10064
  bin: 2.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40731
  bin: 2.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 3.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 3.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 1.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 3.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 1499
  bin: 8.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 8.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1823
  bin: 7.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 5.25e1
  variant carriers: 9
hgvs: p.Thr107Pro
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

17-8079021-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079021
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079021
    reference: chr 17
allele count: 3
allele frequency: 2.496006389776358e-5
allele num: 120192
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+54C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+256C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+54C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+54C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+54C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.310C>T
  hgvsp: ENSP00000433148.1:p.Pro104Ser
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+54C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+54C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+497C>T
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10534
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41370
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 856
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1908
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro104Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff

17-8079029-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079029
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079029
    reference: chr 17
allele count: 77728
allele frequency: 6.425713435402268e-1
allele num: 120964
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.302C>G
  hgvsp: ENSP00000433148.1:p.Ser101Ter
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+489C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+46C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+248C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+46C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+46C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+46C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+46C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+46C>G
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 3.25e1
  variant carriers: 3007
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 9.25e1
  variant carriers: 1628
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3608
  bin: 2.75e1
  variant carriers: 1876
genotype depth: GenotypeDepth
  all individuals: 3087
  bin: 6.75e1
  variant carriers: 3074
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.75e1
  variant carriers: 411
genotype depth: GenotypeDepth
  all individuals: 6834
  bin: 2.25e1
  variant carriers: 968
genotype depth: GenotypeDepth
  all individuals: 4569
  bin: 4.75e1
  variant carriers: 4518
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 3885
  bin: 5.75e1
  variant carriers: 3867
genotype depth: GenotypeDepth
  all individuals: 4211
  bin: 3.75e1
  variant carriers: 4132
genotype depth: GenotypeDepth
  all individuals: 2524
  bin: 7.75e1
  variant carriers: 2518
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 7.25e1
  variant carriers: 2942
genotype depth: GenotypeDepth
  all individuals: 4165
  bin: 5.25e1
  variant carriers: 4149
genotype depth: GenotypeDepth
  all individuals: 2199
  bin: 8.25e1
  variant carriers: 2195
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 126
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 8.75e1
  variant carriers: 1969
genotype depth: GenotypeDepth
  all individuals: 3449
  bin: 6.25e1
  variant carriers: 3438
genotype depth: GenotypeDepth
  all individuals: 4801
  bin: 4.25e1
  variant carriers: 4759
genotype depth: GenotypeDepth
  all individuals: 6766
  bin: 9.75e1
  variant carriers: 6762
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 7.25e1
  variant carriers: 212
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 7.75e1
  variant carriers: 410
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.25e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 4.75e1
  variant carriers: 126
hgvs: p.Ser101Ter
num of homozygotes: 25495
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD

17-8079036-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079036
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079036
    reference: chr 17
allele count: 1
allele frequency: 8.244023083264634e-6
allele num: 121300
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+482C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.295C>T
  hgvsp: ENSP00000433148.1:p.Leu99Phe
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+39C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+241C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+39C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+39C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+39C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+39C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+39C>T
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28894
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13978
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12182
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8308
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu99Phe
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

17-8079037-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079037
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079036
    reference: chr 17
allele count: 2
allele frequency: 1.648804616652927e-5
allele num: 121300
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+37delC
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+37delC
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+37delC
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.293delC
  hgvsp: ENSP00000433148.1:p.Pro98HisfsTer36
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+37delC
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+37delC
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+239delC
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+480delC
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+37delC
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13973
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12176
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28918
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro98HisfsTer36
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: TG
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

17-8079039-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079039
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079039
    reference: chr 17
allele count: 1
allele frequency: 8.244023083264634e-6
allele num: 121300
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+36C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+36C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.292C>G
  hgvsp: ENSP00000433148.1:p.Pro98Ala
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+36C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+36C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+479C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+36C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+36C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+238C>G
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28950
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2573
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1844
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2268
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2089
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro98Ala
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

17-8079043-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079043
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079043
    reference: chr 17
allele count: 1
allele frequency: 8.242256400112095e-6
allele num: 121326
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+32C>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+32C>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+475C>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+234C>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.288C>A
  hgvsp: ENSP00000433148.1:p.His96Gln
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+32C>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+32C>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+32C>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+32C>A
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12168
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2552
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8315
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
hgvs: p.His96Gln
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum

17-8079046-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079046
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079046
    reference: chr 17
allele count: 1
allele frequency: 8.242664029014178e-6
allele num: 121320
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+472A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+29A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+29A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+29A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.285A>G
  hgvsp: ENST00000532998.1:c.285A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+29A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+231A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+29A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+29A>G
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14066
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12150
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43690
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2067
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro95Pro
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS

17-8079049-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079049
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079049
    reference: chr 17
allele count: 3
allele frequency: 2.472147142197904e-5
allele num: 121352
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+26C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+26C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+26C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+26C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+26C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+469C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+228C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.282C>T
  hgvsp: ENST00000532998.1:c.282C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+26C>T
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14095
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29104
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8336
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Phe94Phe
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

17-8079053-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079053
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079053
    reference: chr 17
allele count: 1
allele frequency: 8.240490473993011e-6
allele num: 121352
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+22C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+22C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+465C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+224C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+22C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+22C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+22C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+22C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.278C>G
  hgvsp: ENSP00000433148.1:p.Pro93Arg
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29142
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12147
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2252
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro93Arg
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

17-8079054-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079054
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079054
    reference: chr 17
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+21C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+21C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+21C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.277C>T
  hgvsp: ENSP00000433148.1:p.Pro93Ser
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+223C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+21C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+464C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+21C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+21C>T
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8348
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro93Ser
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

17-8079058-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079058
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079058
    reference: chr 17
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.273C>T
  hgvsp: ENST00000532998.1:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+17C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+17C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+17C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+17C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+17C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+219C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+17C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+460C>T
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14137
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2518
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29249
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Cys91Cys
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

17-8079064-AGAAAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079064
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079059
    reference: chr 17
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+208_155+212delCTTTC
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+6_256+10delCTTTC
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+6_274+10delCTTTC
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+6_447+10delCTTTC
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.262_266delCTTTC
  hgvsp: ENSP00000433148.1:p.Leu88CysfsTer22
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+6_636+10delCTTTC
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+449_87+453delCTTTC
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+6_631+10delCTTTC
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+6_274+10delCTTTC
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29292
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8369
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu88CysfsTer22
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: AGAAAG
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

17-8079070-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079070
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079070
    reference: chr 17
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.631+5C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+207C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.447+5C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.256+5C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.274+5C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.274+5C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.261C>T
  hgvsp: ENST00000532998.1:c.261C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+448C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.636+5C>T
  variant of: http://identifiers.org/hgnc/28128
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14156
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29304
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: c.274+5C>T
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS

17-8079084-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079084
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079084
    reference: chr 17
allele count: 2
allele frequency: 1.647527884409444e-5
allele num: 121394
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.265A>G
  hgvsp: ENSP00000314116.5:p.Ser89Gly
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.265A>G
  hgvsp: ENSP00000436674.1:p.Ser89Gly
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+434A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.247A>G
  hgvsp: ENSP00000402732.2:p.Ser83Gly
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.247A>G
  hgvsp: ENSP00000433148.1:p.Ser83Gly
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.627A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.622A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.438A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+193A>G
  variant of: http://identifiers.org/hgnc/28128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14148
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29341
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12166
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44182
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser89Gly
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

17-8079122-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079122
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079122
    reference: chr 17
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+155G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.400G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.589G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.209G>A
  hgvsp: ENSP00000402732.2:p.Gly70Asp
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+396G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.584G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.227G>A
  hgvsp: ENSP00000436674.1:p.Gly76Asp
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.227G>A
  hgvsp: ENSP00000314116.5:p.Gly76Asp
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.209G>A
  hgvsp: ENSP00000433148.1:p.Gly70Asp
  variant of: http://identifiers.org/hgnc/28128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly76Asp
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum

http://identifiers.org/exac.variant/17-8079123-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079123
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079123
    reference: chr 17
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.399G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.226G>T
  hgvsp: ENSP00000314116.5:p.Gly76Cys
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.588G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.208G>T
  hgvsp: ENSP00000402732.2:p.Gly70Cys
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+154G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.583G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.208G>T
  hgvsp: ENSP00000433148.1:p.Gly70Cys
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.226G>T
  hgvsp: ENSP00000436674.1:p.Gly76Cys
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+395G>T
  variant of: http://identifiers.org/hgnc/28128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29349
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12174
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44233
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly76Cys
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

17-8079123-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079123
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079123
    reference: chr 17
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.208G>A
  hgvsp: ENSP00000433148.1:p.Gly70Ser
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+154G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.399G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.226G>A
  hgvsp: ENSP00000314116.5:p.Gly76Ser
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.226G>A
  hgvsp: ENSP00000436674.1:p.Gly76Ser
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.588G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.583G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.208G>A
  hgvsp: ENSP00000402732.2:p.Gly70Ser
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+395G>A
  variant of: http://identifiers.org/hgnc/28128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29349
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12174
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly76Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

17-8079124-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079124
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079124
    reference: chr 17
allele count: 19
allele frequency: 1.564971006852926e-4
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.225C>T
  hgvsp: ENST00000316425.5:c.225C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.587C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.225C>T
  hgvsp: ENST00000533070.1:c.225C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+153C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.207C>T
  hgvsp: ENST00000532998.1:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+394C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.207C>T
  hgvsp: ENST00000437139.2:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.582C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.398C>T
  variant of: http://identifiers.org/hgnc/28128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12175
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29351
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1761
  bin: 9.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 2243
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala75Ala
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

17-8079125-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079125
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079125
    reference: chr 17
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.586C>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.397C>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.206C>A
  hgvsp: ENSP00000402732.2:p.Ala69Asp
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.224C>A
  hgvsp: ENSP00000436674.1:p.Ala75Asp
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+152C>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+393C>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.206C>A
  hgvsp: ENSP00000433148.1:p.Ala69Asp
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.224C>A
  hgvsp: ENSP00000314116.5:p.Ala75Asp
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.581C>A
  variant of: http://identifiers.org/hgnc/28128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29359
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12180
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14151
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2059
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2246
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala75Asp
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

17-8079136-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079136
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079136
    reference: chr 17
allele count: 5
allele frequency: 4.11834475487612e-5
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+382A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.195A>G
  hgvsp: ENST00000437139.2:c.195A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.570A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.386A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.213A>G
  hgvsp: ENST00000533070.1:c.213A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.195A>G
  hgvsp: ENST00000532998.1:c.195A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.575A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.213A>G
  hgvsp: ENST00000316425.5:c.213A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+141A>G
  variant of: http://identifiers.org/hgnc/28128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14156
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala71Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/17-8079138-CAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079138
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079136
    reference: chr 17
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.191_192delTT
  hgvsp: ENSP00000402732.2:p.Phe64CysfsTer28
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.571_572delTT
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.191_192delTT
  hgvsp: ENSP00000433148.1:p.Phe64CysfsTer47
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.382_383delTT
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.209_210delTT
  hgvsp: ENSP00000314116.5:p.Phe70CysfsTer28
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+378_87+379delTT
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.566_567delTT
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.209_210delTT
  hgvsp: ENSP00000436674.1:p.Phe70CysfsTer28
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+137_155+138delTT
  variant of: http://identifiers.org/hgnc/28128
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29369
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12175
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2056
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Phe70CysfsTer28
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: CAA
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

17-8079145-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079145
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079145
    reference: chr 17
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.186C>T
  hgvsp: ENST00000532998.1:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.566C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.377C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.204C>T
  hgvsp: ENST00000316425.5:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+132C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+373C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.561C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.186C>T
  hgvsp: ENST00000437139.2:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.204C>T
  hgvsp: ENST00000533070.1:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29372
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44268
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 996
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2241
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly68Gly
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/17-8079146-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079146
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079146
    reference: chr 17
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.376G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.203G>T
  hgvsp: ENSP00000436674.1:p.Gly68Val
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.565G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.560G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.185G>T
  hgvsp: ENSP00000433148.1:p.Gly62Val
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.203G>T
  hgvsp: ENSP00000314116.5:p.Gly68Val
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.185G>T
  hgvsp: ENSP00000402732.2:p.Gly62Val
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+372G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+131G>T
  variant of: http://identifiers.org/hgnc/28128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14160
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29368
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2052
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 993
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly68Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD

17-8079147-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079147
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079147
    reference: chr 17
allele count: 4
allele frequency: 3.294675803900896e-5
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.202G>A
  hgvsp: ENSP00000314116.5:p.Gly68Ser
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.375G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.184G>A
  hgvsp: ENSP00000402732.2:p.Gly62Ser
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+371G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.564G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.202G>A
  hgvsp: ENSP00000436674.1:p.Gly68Ser
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.559G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+130G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.184G>A
  hgvsp: ENSP00000433148.1:p.Gly62Ser
  variant of: http://identifiers.org/hgnc/28128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14160
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29376
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12172
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1731
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly68Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

17-8079151-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079151
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079151
    reference: chr 17
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.371C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.198C>T
  hgvsp: ENST00000533070.1:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+126C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.180C>T
  hgvsp: ENST00000437139.2:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+367C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.560C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.180C>T
  hgvsp: ENST00000532998.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.555C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.198C>T
  hgvsp: ENST00000316425.5:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29376
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2242
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr66Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

17-8079163-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079163
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079163
    reference: chr 17
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.548G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.543G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.186G>A
  hgvsp: ENST00000316425.5:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+114G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.168G>A
  hgvsp: ENST00000437139.2:c.168G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.186G>A
  hgvsp: ENST00000533070.1:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+355G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.168G>A
  hgvsp: ENST00000532998.1:c.168G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.359G>A
  variant of: http://identifiers.org/hgnc/28128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala62Ala
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

17-8079164-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079164
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079164
    reference: chr 17
allele count: 4
allele frequency: 3.29489291598023e-5
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.358C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+354C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.185C>G
  hgvsp: ENSP00000436674.1:p.Ala62Gly
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.185C>G
  hgvsp: ENSP00000314116.5:p.Ala62Gly
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.547C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.542C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.167C>G
  hgvsp: ENSP00000402732.2:p.Ala56Gly
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.167C>G
  hgvsp: ENSP00000433148.1:p.Ala56Gly
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+113C>G
  variant of: http://identifiers.org/hgnc/28128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14174
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2233
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala62Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

17-8079179-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079179
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079179
    reference: chr 17
allele count: 19
allele frequency: 1.565254642215742e-4
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+98G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.343G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.156-4G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.170G>A
  hgvsp: ENSP00000436674.1:p.Cys57Tyr
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.170G>A
  hgvsp: ENSP00000314116.5:p.Cys57Tyr
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.156-4G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+339G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.532G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.527G>A
  variant of: http://identifiers.org/hgnc/28128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12108
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44301
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Cys57Tyr
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/17-8079179-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079179
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079179
    reference: chr 17
allele count: 2
allele frequency: 1.647636465490254e-5
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.343G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.170G>T
  hgvsp: ENSP00000436674.1:p.Cys57Phe
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.527G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.156-4G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.156-4G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.170G>T
  hgvsp: ENSP00000314116.5:p.Cys57Phe
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+339G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+98G>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.532G>T
  variant of: http://identifiers.org/hgnc/28128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12108
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Cys57Phe
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

17-8079190-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079190
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079190
    reference: chr 17
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+328A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.521A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+87A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.516A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.156-15A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.156-15A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.159A>G
  hgvsp: ENST00000533070.1:c.159A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.159A>G
  hgvsp: ENST00000316425.5:c.159A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.332A>G
  variant of: http://identifiers.org/hgnc/28128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12081
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro53Pro
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

17-8079196-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079196
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079196
    reference: chr 17
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.510C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.156-21C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+322C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+81C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.515C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.156-3C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.156-3C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.326C>T
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.156-21C>T
  variant of: http://identifiers.org/hgnc/28128
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12065
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14272
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29453
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2188
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44350
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
hgvs: c.156-3C>T
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: MQ

17-8079204-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079204
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079204
    reference: chr 17
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.318G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.507G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.156-29G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.502G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+314G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+73G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.156-11G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.156-29G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.156-11G>A
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12060
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29461
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2001
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

17-8079205-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079205
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079205
    reference: chr 17
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.501G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.156-30G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.156-12G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.506G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.317G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.156-30G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+313G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.156-12G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+72G>A
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14307
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29474
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1675
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 951
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

17-8079216-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079216
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079216
    reference: chr 17
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.490A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.306A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.495A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.156-23A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.156-41A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+302A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.156-41A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+61A>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.156-23A>G
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12057
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2180
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

17-8079222-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079222
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079222
    reference: chr 17
allele count: 2
allele frequency: 1.647419317638919e-5
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.489C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.156-47C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+296C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.156-29C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.300C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.156-47C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.484C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.156-29C>G
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+55C>G
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12053
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14335
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2184
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2000
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

17-8079226-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079226
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079226
    reference: chr 17
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+292G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.156-33G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.480G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.155+51G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+51G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.155+51G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.485G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.296G>A
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.156-33G>A
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29531
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1997
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8317
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ

17-8079231-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8079231
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 8079231
    reference: chr 17
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000389420
  ensembl transcript: ENST00000431792
  gene symbol: TMEM107
  hgvsc: ENST00000431792.2:c.155+46T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000529756
  gene symbol: TMEM107
  hgvsc: ENST00000529756.1:n.475T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000433148
  ensembl transcript: ENST00000532998
  gene symbol: TMEM107
  hgvsc: ENST00000532998.1:c.155+46T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000314116
  ensembl transcript: ENST00000316425
  gene symbol: TMEM107
  hgvsc: ENST00000316425.5:c.156-38T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000436674
  ensembl transcript: ENST00000533070
  gene symbol: TMEM107
  hgvsc: ENST00000533070.1:c.156-38T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000417073
  gene symbol: TMEM107
  hgvsc: ENST00000417073.2:n.291T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179029
  ensembl transcript: ENST00000526920
  gene symbol: TMEM107
  hgvsc: ENST00000526920.1:n.480T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000402732
  ensembl transcript: ENST00000437139
  gene symbol: TMEM107
  hgvsc: ENST00000437139.2:c.155+46T>C
  variant of: http://identifiers.org/hgnc/28128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179029
  ensembl protein: ENSP00000404753
  ensembl transcript: ENST00000449985
  gene symbol: TMEM107
  hgvsc: ENST00000449985.2:c.87+287T>C
  variant of: http://identifiers.org/hgnc/28128
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14326
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 72
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2254
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2079
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1665
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1803
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5468
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1048
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.215362177929023e-4
allele num: 16456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e0

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.984e1

InbreedingCoeff
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SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.232e1

FS
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SIO_000300: 3.391e0

BaseQRankSum
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SIO_000300: -4.532e0

MQRankSum
type: SiteQuality
SIO_000300: 3.33e-1

DP
type: SiteQuality
SIO_000300: 3.719434e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.14e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66222
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10196
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.084205402774397e-5
allele num: 16436
num of homozygotes: 0

Other
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-1

DP
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ReadPosRankSum
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InbreedingCoeff
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SIO_000300: -1.0e-4

BaseQRankSum
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SIO_000300: -7.419e0

FS
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VQSLOD
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MQ
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QD
type: SiteQuality
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ClippingRankSum
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SIO_000300: -1.326e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.022152376922845e-5
allele num: 66178
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 900
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
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SIO_000300: 6.0e1

BaseQRankSum
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InbreedingCoeff
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SIO_000300: -2.0e-4

VQSLOD
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SIO_000300: -1.174e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.69e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.95e-1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.7113e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.511121856866538e-5
allele num: 66176
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10170
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.118e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.85e0

QD
type: SiteQuality
SIO_000300: 1.42e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.02e-1

DP
type: SiteQuality
SIO_000300: 3.710161e6

VQSLOD
type: SiteQuality
SIO_000300: -7.796999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.67e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10150
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.118568232662192e-3
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66036
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.7e0

VQSLOD
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SIO_000300: 2.55e0

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.698605e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.11e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 4.19e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.695652173913044e-5
allele num: 11500
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65988
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8600
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VQSLOD
type: SiteQuality
SIO_000300: -5.468e-1

QD
type: SiteQuality
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MQRankSum
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FS
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MQ
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.517220452131695e-5
allele num: 65910
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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South Asian
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FS
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VQSLOD
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MQ
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ReadPosRankSum
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MQRankSum
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DP
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QD
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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ClippingRankSum
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MQ
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DP
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FS
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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European (Finnish)
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allele num: 240
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Latino
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African
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Other
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South Asian
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InbreedingCoeff
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VQSLOD
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DP
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QD
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ReadPosRankSum
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BaseQRankSum
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FS
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MQRankSum
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MQ
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 1594
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 9.92063492063492e-4
allele num: 1008
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6944
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.82244e5

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.205e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.52e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.96e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 7646
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1700
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4202
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East Asian
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allele count: 1
allele frequency: 8.403361344537816e-4
allele num: 1190
num of homozygotes: 0

QD
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SIO_000300: 9.26e0

ReadPosRankSum
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VQSLOD
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FS
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MQRankSum
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MQ
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InbreedingCoeff
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SIO_000300: -4.02e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.33e-1

DP
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SIO_000300: 4.07934e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 586
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.054185114906177e-4
allele num: 9486
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 434
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 2062
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.35e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 3.324e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.61801e5

MQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.221e0

VQSLOD
type: SiteQuality
SIO_000300: 1.48e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 1
allele frequency: 3.3003300330033e-4
allele num: 3030
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 15586
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 676
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 230
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2660
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7112
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1194
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.86e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

DP
type: SiteQuality
SIO_000300: 5.79288e5

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.630000000000001e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2742
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4384
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 2.265005662514156e-3
allele num: 1766
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33352
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10816
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 436
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.09e0

MQ
type: SiteQuality
SIO_000300: 6.098e1

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.299999999999999e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.35578e5

ClippingRankSum
type: SiteQuality
SIO_000300: -8.84e-1

QD
type: SiteQuality
SIO_000300: 1.429e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3106
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.690776019804111e-5
allele num: 37164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 470
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
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ReadPosRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

QD
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2462
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.124000819840131e-5
allele num: 39032
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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MQRankSum
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ClippingRankSum
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DP
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FS
type: SiteQuality
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VQSLOD
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MQ
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SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 492
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African
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
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QD
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VQSLOD
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FS
type: SiteQuality
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MQ
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ReadPosRankSum
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DP
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 492
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2610
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 40258
num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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QD
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VQSLOD
type: SiteQuality
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MQRankSum
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ReadPosRankSum
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DP
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.82e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

GenotypeQuality
all individuals: 307
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3101
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12854
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4004
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.158428663932657e-5
allele num: 46330
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5364
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

DP
type: SiteQuality
SIO_000300: 1.02481e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

QD
type: SiteQuality
SIO_000300: 1.293e1

VQSLOD
type: SiteQuality
SIO_000300: 6.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.24e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

GenotypeQuality
all individuals: 132
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 30951
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1024
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4504
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 4.101722723543889e-4
allele num: 4876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8036
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.4e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.645e0

DP
type: SiteQuality
SIO_000300: 1.09206e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -5.705e-1

GenotypeQuality
all individuals: 12879
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 727
bin: 3.75e1
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GenotypeQuality
all individuals: 257
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 1
allele frequency: 7.017543859649122e-5
allele num: 14250
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4964
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.894e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.160097e6

VQSLOD
type: SiteQuality
SIO_000300: 4.03e0

MQRankSum
type: SiteQuality
SIO_000300: 1.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.43e1

GenotypeQuality
all individuals: 336
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 356
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8708
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6698
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.786543752456498e-5
allele num: 55974
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5128
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6918
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.188214e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.55e-1

MQ
type: SiteQuality
SIO_000300: 5.824e1

VQSLOD
type: SiteQuality
SIO_000300: -1.808e0

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

QD
type: SiteQuality
SIO_000300: 1.489e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.062e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.085e0

GenotypeQuality
all individuals: 492
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 383
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 16

GenotypeQuality
all individuals: 729
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34923
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 956
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.456485120718697e-4
allele num: 56992
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8764
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6992
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.85951370127364e-4
allele num: 5182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14736
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e-1

QD
type: SiteQuality
SIO_000300: 1.417e1

DP
type: SiteQuality
SIO_000300: 1.227896e6

MQRankSum
type: SiteQuality
SIO_000300: 2.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.17e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1253
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34923
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
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GenotypeQuality
all individuals: 10257
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GenotypeQuality
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bin: 9.75e1
variant carriers: 90

GenotypeQuality
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GenotypeQuality
all individuals: 3983
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 383
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56992
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8764
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.366120218579235e-3
allele num: 732
num of homozygotes: 0

South Asian
type: Population
allele count: 89
allele frequency: 6.039630836047774e-3
allele num: 14736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5182
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.430205949656751e-4
allele num: 6992
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.18e0

QD
type: SiteQuality
SIO_000300: 1.417e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.17e0

MQRankSum
type: SiteQuality
SIO_000300: 2.37e-1

DP
type: SiteQuality
SIO_000300: 1.227896e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e-1

GenotypeQuality
all individuals: 1201
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3983
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8764
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6992
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.340123291342804e-4
allele num: 7462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5182
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56992
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.38e-1

DP
type: SiteQuality
SIO_000300: 1.227896e6

VQSLOD
type: SiteQuality
SIO_000300: 5.18e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.37e-1

QD
type: SiteQuality
SIO_000300: 1.417e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.17e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 380
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 258
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1410
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GenotypeQuality
all individuals: 505
bin: 5.25e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7664
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 7.331378299120235e-4
allele num: 5456
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 7.757092198581561e-4
allele num: 9024
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8976
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.288659793814433e-3
allele num: 776
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15312
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.842052381271351e-4
allele num: 59716
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.47e0

QD
type: SiteQuality
SIO_000300: 2.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

FS
type: SiteQuality
SIO_000300: 2.195e0

MQRankSum
type: SiteQuality
SIO_000300: -1.7e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.334e0

DP
type: SiteQuality
SIO_000300: 1.288118e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.734e0

MQ
type: SiteQuality
SIO_000300: 5.8e1

GenotypeQuality
all individuals: 319
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variant carriers: 0

GenotypeQuality
all individuals: 92
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 41771
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GenotypeQuality
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GenotypeQuality
all individuals: 281
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GenotypeQuality
all individuals: 1708
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GenotypeQuality
all individuals: 637
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 416
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15910
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.212121212121212e-4
allele num: 8250
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6092
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.02e-1

DP
type: SiteQuality
SIO_000300: 1.348153e6

MQRankSum
type: SiteQuality
SIO_000300: 8.89e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.69e-1

QD
type: SiteQuality
SIO_000300: 1.285e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.76e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

GenotypeQuality
all individuals: 167
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9772
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6126
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.569267465946896e-5
allele num: 63724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15948
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.49e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.042e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.354284e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.24e-1

QD
type: SiteQuality
SIO_000300: 2.77e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.24e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
all individuals: 57
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5362
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6162
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15974
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.063725490196078e-4
allele num: 9792
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.373828271466067e-5
allele num: 10668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.02e1

FS
type: SiteQuality
SIO_000300: 2.886e0

VQSLOD
type: SiteQuality
SIO_000300: 2.29e0

DP
type: SiteQuality
SIO_000300: 1.359569e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 7.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.32e-1

QD
type: SiteQuality
SIO_000300: 1.337e1

GenotypeQuality
all individuals: 366
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
all individuals: 1910
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2475
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variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6328
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16214
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.003205128205128e-4
allele num: 9984
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64988
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11170
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.34e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

DP
type: SiteQuality
SIO_000300: 1.397503e6

MQRankSum
type: SiteQuality
SIO_000300: 3.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.5e-2

QD
type: SiteQuality
SIO_000300: 2.832e1

FS
type: SiteQuality
SIO_000300: 1.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.002e0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 478
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GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

FS
type: SiteQuality
SIO_000300: 1.283e0

QD
type: SiteQuality
SIO_000300: 1.18e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

VQSLOD
type: SiteQuality
SIO_000300: 9.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.700613e6

GenotypeQuality
all individuals: 270
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1791
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2393
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 717
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GenotypeQuality
all individuals: 1823
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5368
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11132
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.544423440453686e-4
allele num: 8464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63920
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5974
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16196
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.03102e2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.104e0

MQ
type: SiteQuality
SIO_000300: 5.93e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -5.157e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.392e0

DP
type: SiteQuality
SIO_000300: 1.448807e6

MQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

QD
type: SiteQuality
SIO_000300: 9.3e-1

GenotypeQuality
all individuals: 694
bin: 9.75e1
variant carriers: 44

GenotypeQuality
all individuals: 717
bin: 5.75e1
variant carriers: 9

GenotypeQuality
all individuals: 450
bin: 2.75e1
variant carriers: 17

GenotypeQuality
all individuals: 270
bin: 1.75e1
variant carriers: 19

GenotypeQuality
all individuals: 2393
bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 461
bin: 3.75e1
variant carriers: 12

GenotypeQuality
all individuals: 217
bin: 7.5e0
variant carriers: 24

GenotypeQuality
all individuals: 570
bin: 9.25e1
variant carriers: 6

GenotypeQuality
all individuals: 603
bin: 4.75e1
variant carriers: 15

GenotypeQuality
all individuals: 636
bin: 2.5e0
variant carriers: 22

GenotypeQuality
all individuals: 1791
bin: 2.25e1
variant carriers: 13

GenotypeQuality
all individuals: 40670
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 493
bin: 4.25e1
variant carriers: 16

GenotypeQuality
all individuals: 5368
bin: 6.75e1
variant carriers: 6

Other
type: Population
allele count: 1
allele frequency: 1.187648456057007e-3
allele num: 842
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 7.088846880907373e-4
allele num: 8464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 136
allele frequency: 2.127659574468085e-3
allele num: 63920
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.389867049946101e-4
allele num: 11132
num of homozygotes: 0

African
type: Population
allele count: 41
allele frequency: 4.244306418219461e-3
allele num: 9660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 8.369601606963508e-4
allele num: 5974
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.234872808100766e-4
allele num: 16196
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.104e0

MQ
type: SiteQuality
SIO_000300: 5.93e1

MQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e0

FS
type: SiteQuality
SIO_000300: 1.03102e2

VQSLOD
type: SiteQuality
SIO_000300: -5.157e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.392e0

DP
type: SiteQuality
SIO_000300: 1.448807e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

QD
type: SiteQuality
SIO_000300: 9.3e-1

GenotypeQuality
all individuals: 128
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42484
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 96
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GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 2920
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GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 1839
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GenotypeQuality
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GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 91
bin: 4.75e1
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GenotypeQuality
all individuals: 767
bin: 8.75e1
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GenotypeQuality
all individuals: 6260
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10208
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.827485380116959e-4
allele num: 16416
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66036
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.967e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e-1

DP
type: SiteQuality
SIO_000300: 1.472611e6

QD
type: SiteQuality
SIO_000300: 9.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.169999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.823e0

FS
type: SiteQuality
SIO_000300: 3.653e0

MQRankSum
type: SiteQuality
SIO_000300: 1.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeQuality
all individuals: 7392
bin: 6.25e1
variant carriers: 209

GenotypeQuality
all individuals: 302
bin: 8.75e1
variant carriers: 294

GenotypeQuality
all individuals: 844
bin: 6.75e1
variant carriers: 305

GenotypeQuality
all individuals: 187
bin: 5.25e1
variant carriers: 154

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 30

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 27

GenotypeQuality
all individuals: 167
bin: 5.75e1
variant carriers: 126

GenotypeQuality
all individuals: 99
bin: 2.25e1
variant carriers: 42

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 25

GenotypeQuality
all individuals: 107
bin: 4.25e1
variant carriers: 78

GenotypeQuality
all individuals: 569
bin: 8.25e1
variant carriers: 533

GenotypeQuality
all individuals: 98
bin: 3.75e1
variant carriers: 75

GenotypeQuality
all individuals: 670
bin: 9.25e1
variant carriers: 651

GenotypeQuality
all individuals: 48987
bin: 9.75e1
variant carriers: 48965

African
type: Population
allele count: 5051
allele frequency: 4.883023975251353e-1
allele num: 10344
num of homozygotes: 1223

Latino
type: Population
allele count: 8221
allele frequency: 7.144967842864592e-1
allele num: 11506
num of homozygotes: 2942

European (Non-Finnish)
type: Population
allele count: 43135
allele frequency: 6.482566877066426e-1
allele num: 66540
num of homozygotes: 14076

Other
type: Population
allele count: 576
allele frequency: 6.371681415929203e-1
allele num: 904
num of homozygotes: 193

South Asian
type: Population
allele count: 11772
allele frequency: 7.135410352770033e-1
allele num: 16498
num of homozygotes: 4249

European (Finnish)
type: Population
allele count: 4934
allele frequency: 7.496201762382254e-1
allele num: 6582
num of homozygotes: 1853

East Asian
type: Population
allele count: 4039
allele frequency: 4.70197904540163e-1
allele num: 8590
num of homozygotes: 959

MQ
type: SiteQuality
SIO_000300: 5.953e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.29e0

FS
type: SiteQuality
SIO_000300: 1.998e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-2

DP
type: SiteQuality
SIO_000300: 3.499431e6

QD
type: SiteQuality
SIO_000300: 2.429e1

GenotypeQuality
all individuals: 92
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2108
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele num: 10368
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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DP
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QD
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ClippingRankSum
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VQSLOD
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FS
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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FS
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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MQRankSum
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VQSLOD
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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South Asian
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European (Non-Finnish)
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European (Finnish)
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Other
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Latino
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DP
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VQSLOD
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FS
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MQ
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QD
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

South Asian
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Latino
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East Asian
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66692
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Other
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QD
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FS
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BaseQRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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Other
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Latino
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South Asian
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European (Finnish)
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VQSLOD
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QD
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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DP
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MQRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Non-Finnish)
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European (Finnish)
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East Asian
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Other
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South Asian
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MQRankSum
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MQ
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DP
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QD
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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FS
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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East Asian
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South Asian
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Latino
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European (Finnish)
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FS
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MQ
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DP
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VQSLOD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Non-Finnish)
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East Asian
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Latino
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African
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European (Finnish)
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MQ
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FS
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VQSLOD
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DP
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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Latino
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Other
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South Asian
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MQRankSum
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VQSLOD
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FS
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QD
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MQ
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SIO_000300: 5.971e1

InbreedingCoeff
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SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: -1.07e-1

ReadPosRankSum
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SIO_000300: 9.31e-1

DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele num: 8652
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66722
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African
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allele frequency: 0.0e0
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Latino
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MQRankSum
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BaseQRankSum
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MQ
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ClippingRankSum
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VQSLOD
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FS
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QD
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ReadPosRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele num: 6614
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African
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Latino
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European (Non-Finnish)
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ClippingRankSum
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QD
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VQSLOD
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BaseQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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DP
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MQRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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allele frequency: 1.923076923076923e-4
allele num: 10400
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66736
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South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
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QD
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VQSLOD
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FS
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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SIO_000300: 8.64e-1

MQ
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
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Latino
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allele frequency: 0.0e0
allele num: 11578
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South Asian
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66740
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European (Finnish)
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BaseQRankSum
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ClippingRankSum
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QD
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VQSLOD
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ReadPosRankSum
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FS
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InbreedingCoeff
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DP
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MQ
type: SiteQuality
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Other
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.498351813005694e-5
allele num: 66740
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East Asian
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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QD
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FS
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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MQ
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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European (Finnish)
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African
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BaseQRankSum
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MQRankSum
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MQ
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QD
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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Latino
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South Asian
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European (Non-Finnish)
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African
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East Asian
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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FS
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DP
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ClippingRankSum
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MQRankSum
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MQ
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

African
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Latino
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South Asian
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East Asian
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European (Finnish)
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European (Non-Finnish)
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BaseQRankSum
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InbreedingCoeff
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MQ
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QD
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ClippingRankSum
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DP
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VQSLOD
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FS
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 4
allele frequency: 3.454828122300915e-4
allele num: 11578
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
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BaseQRankSum
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MQ
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FS
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.49e-1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
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SIO_000300: 1.707082e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 8.33e-1

ReadPosRankSum
type: SiteQuality
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DP
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FS
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MQ
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SIO_000300: 5.997e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.96e-1

QD
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BaseQRankSum
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SIO_000300: 3.7e-2

InbreedingCoeff
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VQSLOD
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SIO_000300: 1.39e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.996883241428914e-5
allele num: 66736
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.643e0

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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QD
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VQSLOD
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DP
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 5.884e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.815e0

MQRankSum
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.98e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.48e-1

DP
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 5.993586862057598e-5
allele num: 66738
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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MQRankSum
type: SiteQuality
SIO_000300: 5.79e-1

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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SIO_000300: 8.96e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

East Asian
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African
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South Asian
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

European (Finnish)
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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DP
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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MQ
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MQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66734
num of homozygotes: 0

Latino
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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InbreedingCoeff
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ClippingRankSum
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DP
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ReadPosRankSum
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FS
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QD
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MQRankSum
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BaseQRankSum
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VQSLOD
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MQ
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

European (Non-Finnish)
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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East Asian
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African
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South Asian
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Latino
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Other
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InbreedingCoeff
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DP
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QD
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MQRankSum
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MQ
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FS
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

South Asian
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Latino
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East Asian
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allele frequency: 2.195516524150682e-3
allele num: 8654
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Other
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.282e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.6e-2

DP
type: SiteQuality
SIO_000300: 1.70479e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.06e0

QD
type: SiteQuality
SIO_000300: 1.154e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997242536866083e-5
allele num: 66728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.976e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.98e-1

DP
type: SiteQuality
SIO_000300: 1.70479e6

InbreedingCoeff
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SIO_000300: 0.0e0

VQSLOD
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SIO_000300: 3.06e0

FS
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SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -5.282e0

MQRankSum
type: SiteQuality
SIO_000300: -3.6e-2

QD
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SIO_000300: 1.154e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.861e0

DP
type: SiteQuality
SIO_000300: 1.701794e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.53e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 5.905e1

VQSLOD
type: SiteQuality
SIO_000300: 5.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.75e-1

QD
type: SiteQuality
SIO_000300: 1.373e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.412e0

MQRankSum
type: SiteQuality
SIO_000300: -9.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

VQSLOD
type: SiteQuality
SIO_000300: 1.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.93e-2

FS
type: SiteQuality
SIO_000300: 5.003e0

DP
type: SiteQuality
SIO_000300: 1.701098e6

QD
type: SiteQuality
SIO_000300: 1.357e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.84e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.542e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.44e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.16e-1

FS
type: SiteQuality
SIO_000300: 2.729e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.789e0

DP
type: SiteQuality
SIO_000300: 1.700722e6

QD
type: SiteQuality
SIO_000300: 1.541e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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BaseQRankSum
type: SiteQuality
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MQRankSum
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MQ
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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MQRankSum
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DP
type: SiteQuality
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BaseQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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QD
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ClippingRankSum
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FS
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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Other
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66734
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Latino
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QD
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BaseQRankSum
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MQRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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DP
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VQSLOD
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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num of homozygotes: 0

East Asian
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African
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allele num: 10406
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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South Asian
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FS
type: SiteQuality
SIO_000300: 6.216e0

BaseQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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DP
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MQRankSum
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QD
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MQ
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