14-103986778-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986778
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986778
    reference: chr 14
allele count: 2
allele frequency: 2.963050757059468e-5
allele num: 67498
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.171+61C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.632+28C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.260+28C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.777+28C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-130C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-130C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*463+28C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-130C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21566
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19576
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5099
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4609
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5141
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2116
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25000
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6155
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4731
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP

14-103986779-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986779
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986779
    reference: chr 14
allele count: 1
allele frequency: 1.480867195829878e-5
allele num: 67528
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.260+27C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.632+27C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*463+27C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-131C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.171+60C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-131C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-131C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.777+27C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4590
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19553
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21595
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5075
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6224
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2108
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3018
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD

14-103986780-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986780
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986780
    reference: chr 14
allele count: 2
allele frequency: 2.976899261728983e-5
allele num: 67184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.171+59C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.632+26C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-132C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.260+26C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*463+26C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-132C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.777+26C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-132C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21681
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4614
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6130
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3014
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

14-103986790-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986790
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986790
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 67246
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-142C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.260+16C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*463+16C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.171+49C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.777+16C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.632+16C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-142C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-142C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18709
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4631
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22051
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6088
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2114
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25799
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5574
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

14-103986797-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986797
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986797
    reference: chr 14
allele count: 2
allele frequency: 2.930488805532763e-5
allele num: 68248
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.171+42G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.632+9G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-149G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-149G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-149G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.260+9G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*463+9G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.777+9G>A
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18091
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7121
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22314
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5559
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3855
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5445
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2519
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/14-103986798-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986798
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986798
    reference: chr 14
allele count: 1
allele frequency: 1.46864444118079e-5
allele num: 68090
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.777+8G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.632+8G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.260+8G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.171+41G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-150G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-150G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*463+8G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-150G>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4349
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18031
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7033
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1490
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3860
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8144
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1086
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26096
  bin: 2.25e1
  variant carriers: 0
hgvs: c.777+8G>T
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum

14-103986809-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986809
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986809
    reference: chr 14
allele count: 2
allele frequency: 2.89863474303603e-5
allele num: 68998
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*460C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.257C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-161C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-161C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.171+30C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.629C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.774C>T
  hgvsp: ENST00000348956.2:c.774C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-161C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3085
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4705
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3204
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17576
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1493
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5485
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2878
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1115
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24997
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr258Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

14-103986812-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986812
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986812
    reference: chr 14
allele count: 1
allele frequency: 1.432295396602595e-5
allele num: 69818
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.171+27C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-164C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-164C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*457C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.254C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.771C>T
  hgvsp: ENST00000348956.2:c.771C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.626C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-164C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17575
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7638
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3162
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4599
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5353
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3312
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2593
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9196
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu257Leu
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-103986817-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986817
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986817
    reference: chr 14
allele count: 2
allele frequency: 2.837926043647303e-5
allele num: 70474
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.249G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-169G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.171+22G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.766G>A
  hgvsp: ENSP00000299198.2:p.Gly256Ser
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*452G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-169G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-169G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.621G>A
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17320
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4611
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22000
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 759
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1294
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25864
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3023
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly256Ser
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

14-103986818-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986818
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986818
    reference: chr 14
allele count: 1
allele frequency: 1.41993013943714e-5
allele num: 70426
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-170C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*451C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.171+21C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.620C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-170C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.765C>A
  hgvsp: ENST00000348956.2:c.765C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.248C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-170C>A
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17180
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2637
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5189
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2579
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1251
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1603
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2920
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr255Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

14-103986828-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986828
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986828
    reference: chr 14
allele count: 1
allele frequency: 1.364144817613838e-5
allele num: 73306
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*441G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.610G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-180G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.171+11G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.238G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.755G>A
  hgvsp: ENSP00000299198.2:p.Arg252His
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-180G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-180G>A
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16525
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10240
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4524
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25714
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2141
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11942
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg252His
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-103986829-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986829
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986829
    reference: chr 14
allele count: 11
allele frequency: 1.484841121999946e-4
allele num: 74082
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*440C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-181C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.754C>T
  hgvsp: ENSP00000299198.2:p.Arg252Cys
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.237C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-181C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.609C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.171+10C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-181C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20986
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16290
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10891
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12893
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25716
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2509
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5056
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg252Cys
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ

14-103986830-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986830
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986830
    reference: chr 14
allele count: 1
allele frequency: 1.334187213149749e-5
allele num: 74952
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-182C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.236C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.753C>T
  hgvsp: ENST00000348956.2:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.608C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-182C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*439C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-182C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.171+9C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16125
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4385
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11283
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3697
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20867
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1930
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13313
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5040
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr251Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-103986834-AAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986834
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986832
    reference: chr 14
allele count: 1
allele frequency: 1.292490629442937e-5
allele num: 77370
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-188_*-187delGT
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*433_*434delGT
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-188_30-187delGT
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.747_748delGT
  hgvsp: ENSP00000299198.2:p.Phe250HisfsTer11
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.230_231delGT
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-188_182-187delGT
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.171+3_171+4delGT
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.602_603delGT
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20078
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15498
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24698
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2474
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 820
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Phe250HisfsTer11
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: AAC
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

14-103986837-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986837
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986837
    reference: chr 14
allele count: 2
allele frequency: 2.530812643939969e-5
allele num: 79026
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-189T>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.171+2T>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.229T>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*432T>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-189T>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.601T>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.746T>C
  hgvsp: ENSP00000299198.2:p.Val249Ala
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-189T>C
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3980
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15058
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14355
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23979
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4668
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 8.25e1
  variant carriers: 0
hgvs: c.171+2T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

14-103986854-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986854
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986854
    reference: chr 14
allele count: 1
allele frequency: 1.126252956414011e-5
allele num: 88790
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-206G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.729G>A
  hgvsp: ENST00000348956.2:c.729G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*415G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-206G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-206G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.156G>A
  hgvsp: ENST00000553610.1:c.156G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.212G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.584G>A
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10296
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23549
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1784
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly243Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD

14-103986856-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986856
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986856
    reference: chr 14
allele count: 21
allele frequency: 2.324191513380703e-4
allele num: 90354
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-208G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-208G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.727G>A
  hgvsp: ENSP00000299198.2:p.Gly243Arg
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.154G>A
  hgvsp: ENSP00000451426.1:p.Gly52Arg
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.582G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*413G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.210G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-208G>A
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9585
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14581
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5435
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24948
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18036
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 9.75e1
  variant carriers: 19
hgvs: p.Gly243Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/14-103986857-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986857
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986857
    reference: chr 14
allele count: 2
allele frequency: 2.195582488034076e-5
allele num: 91092
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.581G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-209G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.153G>T
  hgvsp: ENSP00000451426.1:p.Lys51Asn
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-209G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*412G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-209G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.209G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.726G>T
  hgvsp: ENSP00000299198.2:p.Lys242Asn
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5542
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9192
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2717
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2680
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Lys242Asn
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP

14-103986857-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986857
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986857
    reference: chr 14
allele count: 1
allele frequency: 1.097791244017038e-5
allele num: 91092
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.726G>C
  hgvsp: ENSP00000299198.2:p.Lys242Asn
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.209G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*412G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.153G>C
  hgvsp: ENSP00000451426.1:p.Lys51Asn
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-209G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.581G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-209G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-209G>C
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5542
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2680
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17568
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Lys242Asn
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

14-103986857-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986857
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986857
    reference: chr 14
allele count: 1
allele frequency: 1.097791244017038e-5
allele num: 91092
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-209G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.726G>A
  hgvsp: ENST00000348956.2:c.726G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*412G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.209G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-209G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.153G>A
  hgvsp: ENST00000553610.1:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-209G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.581G>A
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5542
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28274
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Lys242Lys
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-103986874-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986874
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986874
    reference: chr 14
allele count: 1
allele frequency: 1.013540906510987e-5
allele num: 98664
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.709G>T
  hgvsp: ENSP00000299198.2:p.Val237Phe
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.136G>T
  hgvsp: ENSP00000451426.1:p.Val46Phe
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.564G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-226G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.192G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*395G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-226G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-226G>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10670
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32111
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5783
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1556
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1696
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13132
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val237Phe
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

14-103986880-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986880
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986880
    reference: chr 14
allele count: 2
allele frequency: 1.974606559642991e-5
allele num: 101286
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.703C>T
  hgvsp: ENST00000348956.2:c.703C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-232C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-232C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.130C>T
  hgvsp: ENST00000553610.1:c.130C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.558C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*389C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.186C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-232C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4655
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34382
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu235Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

14-103986880-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986880
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986880
    reference: chr 14
allele count: 1
allele frequency: 9.873032798214955e-6
allele num: 101286
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-232C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-232C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*389C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.703C>G
  hgvsp: ENSP00000299198.2:p.Leu235Val
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.186C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.130C>G
  hgvsp: ENSP00000451426.1:p.Leu44Val
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-232C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.558C>G
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4655
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1328
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2388
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu235Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

14-103986881-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986881
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986881
    reference: chr 14
allele count: 1
allele frequency: 9.839807926949265e-6
allele num: 101628
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.557C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-233C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*388C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.129C>G
  hgvsp: ENSP00000451426.1:p.His43Gln
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.702C>G
  hgvsp: ENSP00000299198.2:p.His234Gln
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.185C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-233C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-233C>G
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4576
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11499
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
hgvs: p.His234Gln
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

14-103986893-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986893
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986893
    reference: chr 14
allele count: 5
allele frequency: 4.853803440375879e-5
allele num: 103012
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-245C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.690C>T
  hgvsp: ENST00000348956.2:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.117C>T
  hgvsp: ENST00000553610.1:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-245C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-245C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.545C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*376C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.173C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8180
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8615
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1065
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10931
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1146
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asn230Asn
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/14-103986905-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986905
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986905
    reference: chr 14
allele count: 1
allele frequency: 9.717795226618984e-6
allele num: 102904
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*364G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.533G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-257G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.105G>T
  hgvsp: ENST00000553610.1:c.105G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-257G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-257G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.678G>T
  hgvsp: ENST00000348956.2:c.678G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.161G>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5016
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8677
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8634
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33575
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2357
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11565
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu226Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

14-103986905-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986905
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986905
    reference: chr 14
allele count: 1
allele frequency: 9.717795226618984e-6
allele num: 102904
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*364G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.533G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.678G>C
  hgvsp: ENST00000348956.2:c.678G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.105G>C
  hgvsp: ENST00000553610.1:c.105G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-257G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-257G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.161G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-257G>C
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5016
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8677
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33575
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 907
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11565
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu226Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD

14-103986908-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986908
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986908
    reference: chr 14
allele count: 1
allele frequency: 9.760096820160457e-6
allele num: 102458
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.102C>T
  hgvsp: ENST00000553610.1:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.530C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*361C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-260C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.158C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.675C>T
  hgvsp: ENST00000348956.2:c.675C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-260C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-260C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5415
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8872
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1158
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Phe225Phe
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-103986911-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986911
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986911
    reference: chr 14
allele count: 1
allele frequency: 9.806421244630985e-6
allele num: 101974
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.155C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*358C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-263C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-263C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.527C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.672C>T
  hgvsp: ENST00000348956.2:c.672C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.99C>T
  hgvsp: ENST00000553610.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-263C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32098
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5986
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1383
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr224Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

14-103986920-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986920
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986920
    reference: chr 14
allele count: 2
allele frequency: 2.005977813885378e-5
allele num: 99702
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.90C>T
  hgvsp: ENST00000553610.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.663C>T
  hgvsp: ENST00000348956.2:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.518C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-272C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-272C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-272C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.146C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*349C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10089
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8501
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asp221Asp
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/14-103986933-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986933
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986933
    reference: chr 14
allele count: 1
allele frequency: 1.059366922327217e-5
allele num: 94396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.133G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.509-4G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-285G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.654-4G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*340-4G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-285G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.81-4G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-285G>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20139
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12096
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6922
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14636
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3213
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 974
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1509
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
hgvs: c.654-4G>T
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum

14-103986934-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986934
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986934
    reference: chr 14
allele count: 3
allele frequency: 3.198157861072023e-5
allele num: 93804
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.509-5C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-286C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.654-5C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.81-5C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.132C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*340-5C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-286C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-286C>A
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21407
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 7.5e0
  variant carriers: 0
hgvs: c.654-5C>A
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
reference allele: G
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

14-103986948-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986948
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986948
    reference: chr 14
allele count: 2
allele frequency: 2.253521126760563e-5
allele num: 88750
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-300G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.118G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.81-19G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*340-19G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.654-19G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-300G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-300G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.509-19G>C
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13987
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10246
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22921
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4772
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1961
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26299
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1165
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2296
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

14-103986951-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986951
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986951
    reference: chr 14
allele count: 2
allele frequency: 2.283417819792666e-5
allele num: 87588
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*340-22C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.509-22C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.81-22C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.115C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-303C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.654-22C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-303C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-303C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5085
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8978
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14306
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24028
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2232
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2499
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10866
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 817
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5659
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum

14-103986952-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986952
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986952
    reference: chr 14
allele count: 1
allele frequency: 1.153615430760002e-5
allele num: 86684
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-304C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-304C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.654-23C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-304C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.509-23C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*340-23C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.81-23C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.114C>G
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5038
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3843
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24035
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26938
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2329
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5622
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2409
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

14-103986956-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986956
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986956
    reference: chr 14
allele count: 1
allele frequency: 1.166507244009985e-5
allele num: 85726
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-308T>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.654-27T>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.110T>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-308T>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*340-27T>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.509-27T>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.81-27T>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-308T>C
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2481
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25430
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5656
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6838
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14715
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6420
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2838
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 976
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

14-103986968-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986968
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986968
    reference: chr 14
allele count: 3
allele frequency: 4.143188597944978e-5
allele num: 72408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.98C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-320C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-320C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.654-39C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*340-39C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.509-39C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.81-39C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-320C>A
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9227
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18552
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23234
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4495
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3498
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1736
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

14-103986969-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986969
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986969
    reference: chr 14
allele count: 1
allele frequency: 1.379919412706298e-5
allele num: 72468
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.97G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-321G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-321G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.509-40G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.81-40G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*340-40G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-321G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.654-40G>A
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18769
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3992
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2420
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23128
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7611
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1857
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4988
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3483
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6080
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5118
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

14-103986971-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986971
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986971
    reference: chr 14
allele count: 1
allele frequency: 1.372193863549042e-5
allele num: 72876
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-323G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-323G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.95G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*340-42G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.81-42G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.509-42G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-323G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.654-42G>A
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22991
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8915
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4043
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19070
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1343
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6071
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4462
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3459
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1357
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

14-103986976-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986976
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986976
    reference: chr 14
allele count: 1
allele frequency: 1.458023503338874e-5
allele num: 68586
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-328G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-328G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.81-47G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.654-47G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.509-47G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.90G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*340-47G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-328G>A
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20881
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8453
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5288
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7491
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19355
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1585
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

14-103986977-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986977
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986977
    reference: chr 14
allele count: 1
allele frequency: 1.485266159695817e-5
allele num: 67328
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.81-48G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-329G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-329G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.509-48G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.89G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-329G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.654-48G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*340-48G>A
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21217
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21354
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8336
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5206
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7204
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7541
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1319
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

14-103986978-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986978
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986978
    reference: chr 14
allele count: 15
allele frequency: 2.258015956646094e-4
allele num: 66430
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-330C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.509-49C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.88C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-330C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.654-49C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*340-49C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.81-49C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-330C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4190
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21227
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21445
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8253
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7398
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5282
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4397
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 7.25e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum

14-103986978-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986978
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986978
    reference: chr 14
allele count: 1
allele frequency: 1.505343971097396e-5
allele num: 66430
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-330C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-330C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.81-49C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.654-49C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-330C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.509-49C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.88C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*340-49C>G
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21445
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4190
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8253
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7398
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18140
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6910
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5808
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

http://identifiers.org/exac.variant/14-103986981-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103986981
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103986981
    reference: chr 14
allele count: 1
allele frequency: 1.520172691617768e-5
allele num: 65782
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.509-52G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.654-52G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.*-333G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000555366
  gene symbol: CKB
  hgvsc: ENST00000555366.1:n.85G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.81-52G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.182-333G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.30-333G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*340-52G>T
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21196
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8192
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21521
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5078
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8915
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4497
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16247
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

14-103987383-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987383
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987383
    reference: chr 14
allele count: 1
allele frequency: 1.586294416243655e-4
allele num: 6304
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+217C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.29+27C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+217C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+217C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+217C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+217C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+217C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7305
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1156
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

14-103987387-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987387
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987387
    reference: chr 14
allele count: 10
allele frequency: 1.510574018126888e-3
allele num: 6620
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.29+23G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+213G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+213G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+213G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+213G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+213G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+213G>A
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7451
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5509
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1509
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2054
  bin: 2.25e1
  variant carriers: 2
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

14-103987406-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987406
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987406
    reference: chr 14
allele count: 1
allele frequency: 1.172058134083451e-4
allele num: 8532
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+194C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+194C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.29+4C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+194C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+194C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+194C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+194C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9275
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3258
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3463
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1376
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7964
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1286
  bin: 2.5e0
  variant carriers: 0
hgvs: c.29+4C>T
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-103987415-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987415
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987415
    reference: chr 14
allele count: 5
allele frequency: 5.620503597122302e-4
allele num: 8896
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+185G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+185G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+185G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.24G>A
  hgvsp: ENSP00000451686.1:p.Glu9Lys
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+185G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+185G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+185G>A
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10536
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3368
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1224
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu9Lys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

14-103987433-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987433
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987433
    reference: chr 14
allele count: 2
allele frequency: 2.155172413793103e-4
allele num: 9280
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451686
  ensembl transcript: ENST00000555039
  gene symbol: CKB
  hgvsc: ENST00000555039.1:c.6G>A
  hgvsp: ENSP00000451686.1:p.Ala3Thr
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+167G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+167G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+167G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+167G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+167G>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+167G>A
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14961
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1357
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Ala3Thr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS

14-103987467-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987467
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987467
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 9008
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+133C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+133C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+133C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+133C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+133C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+133C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23834
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20916
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3029
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP

14-103987475-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987475
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987475
    reference: chr 14
allele count: 1
allele frequency: 1.136105430583958e-4
allele num: 8802
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+125C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+125C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+125C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+125C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+125C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+125C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27175
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2802
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24594
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3061
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

14-103987482-C-CCCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987482
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987485
    reference: chr 14
allele count: 46
allele frequency: 8.339376359680928e-3
allele num: 5516
alternate allele: CCCT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+115_*339+117dupAGG
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+115_60+117dupAGG
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+115_653+117dupAGG
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+115_181+117dupAGG
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+115_508+117dupAGG
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+115_80+117dupAGG
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 1.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28162
  bin: 2.5e0
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 7.5e0
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 7391
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 3.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2264
  bin: 2.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 24036
  bin: 7.5e0
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 1.25e1
  variant carriers: 5
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD

14-103987482-C-CCCTCCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987482
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987488
    reference: chr 14
allele count: 11
allele frequency: 1.994198694706309e-3
allele num: 5516
alternate allele: CCCTCCT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+112_60+117dupAGGAGG
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+112_*339+117dupAGGAGG
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+112_508+117dupAGGAGG
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+112_181+117dupAGGAGG
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+112_80+117dupAGGAGG
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+112_653+117dupAGGAGG
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 7.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28162
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7391
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2264
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24036
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

14-103987482-C-CCCTCCTCCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987482
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987491
    reference: chr 14
allele count: 2
allele frequency: 3.625815808556925e-4
allele num: 5516
alternate allele: CCCTCCTCCT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2264
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24036
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7391
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

14-103987482-CCCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987482
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987479
    reference: chr 14
allele count: 276
allele frequency: 5.003625815808557e-2
allele num: 5516
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+115_80+117delAGG
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+115_653+117delAGG
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+115_*339+117delAGG
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+115_508+117delAGG
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+115_181+117delAGG
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+115_60+117delAGG
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 1.75e1
  variant carriers: 96
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 7.5e0
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28162
  bin: 2.5e0
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 2.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 1.25e1
  variant carriers: 134
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 6.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 9.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 24036
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 3.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 2264
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7391
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: CCCT
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum

14-103987482-CCCTCCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987482
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987476
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 5516
alternate allele: C
canonical: false
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28162
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24036
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7391
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2264
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 120
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 212
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1472
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 56
  num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
reference allele: CCCTCCT
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-103987549-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987549
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987549
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 32750
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+51C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+51C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+51C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+51C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+51C>A
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+51C>A
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26751
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15313
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4686
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4258
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5975
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10413
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10307
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2388
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14124
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

14-103987550-G-GAGGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987550
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987554
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 32874
alternate allele: GAGGT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+46_508+49dupACCT
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+46_653+49dupACCT
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+46_60+49dupACCT
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+46_181+49dupACCT
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+46_80+49dupACCT
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+46_*339+49dupACCT
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26744
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15327
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1452
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1918
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10586
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 775
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 990
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2389
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9193
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4695
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

14-103987551-AGGTAGCGGG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987551
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987542
    reference: chr 14
allele count: 15
allele frequency: 4.580152671755725e-4
allele num: 32750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3151
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11120
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26754
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15316
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16051
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2382
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1893
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8434
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10682
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1575
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 9.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
reference allele: AGGTAGCGGG
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

14-103987553-GTAGC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987553
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987549
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 32786
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+43_60+46delGCTA
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+43_653+46delGCTA
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+43_*339+46delGCTA
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+43_181+46delGCTA
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+43_80+46delGCTA
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+43_508+46delGCTA
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 11064
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26801
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15276
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5918
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16580
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10780
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1738
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2385
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4308
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: GTAGC
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

14-103987554-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987554
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987554
    reference: chr 14
allele count: 87
allele frequency: 2.727272727272727e-3
allele num: 31900
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+46A>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+46A>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+46A>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+46A>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+46A>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+46A>G
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 1.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26768
  bin: 7.5e0
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11194
  bin: 1.25e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15152
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4417
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4043
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 8.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 9.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 2334
  bin: 3.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2790
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7643
  bin: 1.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 10830
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 5.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 9.75e1
  variant carriers: 76
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 7.75e1
  variant carriers: 3
num of homozygotes: 4
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/14-103987557-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987557
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987557
    reference: chr 14
allele count: 1
allele frequency: 3.068990915786889e-5
allele num: 32584
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+43G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+43G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+43G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+43G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+43G>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+43G>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11247
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14955
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26902
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2311
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18952
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5533
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4542
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1830
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11070
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1915
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

14-103987562-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987562
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987562
    reference: chr 14
allele count: 1
allele frequency: 2.947244326554671e-5
allele num: 33930
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+38T>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+38T>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+38T>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+38T>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+38T>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+38T>C
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13778
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27824
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11274
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10810
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1127
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3876
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22521
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4478
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4568
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

14-103987564-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987564
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987564
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 34460
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+36C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+36C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+36C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+36C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+36C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+36C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2378
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11234
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13356
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28127
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10638
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4595
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4424
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3761
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23089
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-103987568-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987568
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987568
    reference: chr 14
allele count: 1
allele frequency: 2.82151120139947e-5
allele num: 35442
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+32C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+32C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+32C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+32C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+32C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+32C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12405
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28727
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10208
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24117
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3538
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4596
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4424
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-103987572-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987572
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987572
    reference: chr 14
allele count: 3
allele frequency: 8.249010118785745e-5
allele num: 36368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+28G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+28G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+28G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+28G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+28G>C
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+28G>C
  variant of: http://identifiers.org/hgnc/1991
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29534
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11194
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11083
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3925
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26444
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9459
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4489
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2814
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2392
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4414
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-103987576-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987576
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987576
    reference: chr 14
allele count: 63
allele frequency: 1.632039790684421e-3
allele num: 38602
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000557569
  gene symbol: CKB
  hgvsc: ENST00000557569.1:n.577C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+24C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+24C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+24C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+24C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+24C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+24C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 1.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9096
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 30565
  bin: 7.5e0
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10863
  bin: 1.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1902
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4309
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1632
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4221
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8117
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 28802
  bin: 2.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/14-103987577-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987577
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987577
    reference: chr 14
allele count: 1
allele frequency: 2.554278416347382e-5
allele num: 39150
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+23T>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+23T>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+23T>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+23T>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+23T>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+23T>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000557569
  gene symbol: CKB
  hgvsc: ENST00000557569.1:n.576T>G
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10834
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8737
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1926
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2360
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7773
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28376
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5366
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

14-103987578-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987578
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987578
    reference: chr 14
allele count: 1
allele frequency: 2.522831626217266e-5
allele num: 39638
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+22C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+22C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+22C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+22C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+22C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000557569
  gene symbol: CKB
  hgvsc: ENST00000557569.1:n.575C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+22C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30879
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8386
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10760
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4184
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4271
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5889
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1706
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29012
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

14-103987580-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987580
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987580
    reference: chr 14
allele count: 1
allele frequency: 2.459540557823798e-5
allele num: 40658
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+20C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+20C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+20C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000557569
  gene symbol: CKB
  hgvsc: ENST00000557569.1:n.573C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+20C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+20C>T
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+20C>T
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6493
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10524
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7762
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31009
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7093
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29795
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4158
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4075
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1473
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

14-103987582-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987582
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987582
    reference: chr 14
allele count: 30
allele frequency: 7.188728074379373e-4
allele num: 41732
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+18C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+18C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+18C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000557569
  gene symbol: CKB
  hgvsc: ENST00000557569.1:n.571C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+18C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+18C>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+18C>G
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31071
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7307
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10258
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1775
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7202
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1737
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6735
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 9.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4064
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 1
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum

http://identifiers.org/exac.variant/14-103987586-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 103987586
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 103987586
    reference: chr 14
allele count: 1
allele frequency: 2.233937985881512e-5
allele num: 44764
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000553528
  gene symbol: CKB
  hgvsc: ENST00000553528.1:n.508+14T>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000554282
  gene symbol: CKB
  hgvsc: ENST00000554282.1:n.181+14T>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000299198
  ensembl transcript: ENST00000348956
  gene symbol: CKB
  hgvsc: ENST00000348956.2:c.653+14T>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166165
  ensembl transcript: ENST00000557569
  gene symbol: CKB
  hgvsc: ENST00000557569.1:n.567T>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451680
  ensembl transcript: ENST00000554989
  gene symbol: CKB
  hgvsc: ENST00000554989.1:c.60+14T>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000450676
  ensembl transcript: ENST00000553652
  gene symbol: CKB
  hgvsc: ENST00000553652.1:c.*339+14T>G
  variant of: http://identifiers.org/hgnc/1991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166165
  ensembl protein: ENSP00000451426
  ensembl transcript: ENST00000553610
  gene symbol: CKB
  hgvsc: ENST00000553610.1:c.80+14T>G
  variant of: http://identifiers.org/hgnc/1991
canonical: false
consequence: non coding transcript exon
filter: PASS
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 5624
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3058
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2357
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6120
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36762
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4820
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4882
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.327787021630616e-4
allele num: 6010
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2990
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

FS
type: SiteQuality
SIO_000300: 1.685e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.23e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.239e0

VQSLOD
type: SiteQuality
SIO_000300: -1.115e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQ
type: SiteQuality
SIO_000300: 5.682e1

DP
type: SiteQuality
SIO_000300: 7.48145e5

GenotypeQuality
all individuals: 4730
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25090
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6137
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5619
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 151
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2317
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 904
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36800
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5978
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2988
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 2.016129032258064e-3
allele num: 496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4818
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4890
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.21e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.17e-1

FS
type: SiteQuality
SIO_000300: 3.424e0

DP
type: SiteQuality
SIO_000300: 7.48612e5

QD
type: SiteQuality
SIO_000300: 1.162e1

GenotypeQuality
all individuals: 318
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 918
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24420
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2184
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4745
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5940
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5617
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2908
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.676727028839705e-4
allele num: 5964
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.064409578860446e-4
allele num: 4844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2942
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4816
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.153e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.19e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

FS
type: SiteQuality
SIO_000300: 3.124e0

MQ
type: SiteQuality
SIO_000300: 5.904e1

DP
type: SiteQuality
SIO_000300: 7.47797e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e0

MQRankSum
type: SiteQuality
SIO_000300: 2.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.29e-1

GenotypeQuality
all individuals: 7217
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5793
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1005
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4340
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2667
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2930
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4818
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5952
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4776
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 490
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.256e1

FS
type: SiteQuality
SIO_000300: 2.521e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.17e-2

MQ
type: SiteQuality
SIO_000300: 5.915e1

MQRankSum
type: SiteQuality
SIO_000300: -6.919999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.3e-2

DP
type: SiteQuality
SIO_000300: 7.63646e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.295e0

GenotypeQuality
all individuals: 8651
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1556
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 155
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1414
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 26756
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37068
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2970
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6046
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11960
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 506
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 4.139072847682119e-4
allele num: 4832
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4866
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.196e1

VQSLOD
type: SiteQuality
SIO_000300: 2.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.03e-2

DP
type: SiteQuality
SIO_000300: 7.81399e5

GenotypeQuality
all individuals: 389
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2102
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5540
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.071251035625518e-4
allele num: 4828
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36926
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2966
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6038
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11964
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.827e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.04e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.421e0

QD
type: SiteQuality
SIO_000300: 5.4e0

MQ
type: SiteQuality
SIO_000300: 5.777e1

FS
type: SiteQuality
SIO_000300: 8.045999999999999e0

DP
type: SiteQuality
SIO_000300: 7.81465e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.91e0

GenotypeQuality
all individuals: 244
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 336
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3473
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2580
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5367
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8301
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4918
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37426
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6040
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 4.086636697997548e-4
allele num: 4894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2966
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12250
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

QD
type: SiteQuality
SIO_000300: 1.375e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.936e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.87e-1

DP
type: SiteQuality
SIO_000300: 7.96871e5

GenotypeQuality
all individuals: 1378
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1144
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 98
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variant carriers: 0

GenotypeQuality
all individuals: 5503
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variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 245
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1986
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 510
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.098477486232588e-5
allele num: 12348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4952
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6104
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3012
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5012
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.02483e5

VQSLOD
type: SiteQuality
SIO_000300: -5.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.68e0

QD
type: SiteQuality
SIO_000300: 1.154e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.299999999999999e-3

FS
type: SiteQuality
SIO_000300: 4.598e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.031e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.42e-1

GenotypeQuality
all individuals: 668
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2586
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1765
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5450
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5251
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1175
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9816
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variant carriers: 0

GenotypeQuality
all individuals: 361
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variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6136
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 4.004805766920304e-4
allele num: 4994
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3036
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5092
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38214
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.83e-1

FS
type: SiteQuality
SIO_000300: 3.762e0

DP
type: SiteQuality
SIO_000300: 8.1455e5

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
SIO_000300: 1.377e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.999999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.33e-1

GenotypeQuality
all individuals: 565
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5369
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25913
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variant carriers: 0

GenotypeQuality
all individuals: 135
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variant carriers: 0

GenotypeQuality
all individuals: 110
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variant carriers: 0

GenotypeQuality
all individuals: 339
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variant carriers: 0

GenotypeQuality
all individuals: 760
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1179
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
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variant carriers: 0

GenotypeQuality
all individuals: 154
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variant carriers: 0

GenotypeQuality
all individuals: 10137
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5080
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3020
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6110
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12506
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.00160128102482e-4
allele num: 4996
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38186
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.656e0

MQRankSum
type: SiteQuality
SIO_000300: 3.77e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.645e-1

MQ
type: SiteQuality
SIO_000300: 5.82e1

QD
type: SiteQuality
SIO_000300: 3.98e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.299999999999999e-3

FS
type: SiteQuality
SIO_000300: 1.768e0

DP
type: SiteQuality
SIO_000300: 8.19748e5

GenotypeQuality
all individuals: 1309
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5166
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1247
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2557
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
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variant carriers: 0

GenotypeQuality
all individuals: 111
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GenotypeQuality
all individuals: 248
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 801
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variant carriers: 0

GenotypeQuality
all individuals: 4979
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12756
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.50928435210278e-5
allele num: 39852
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6344
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5296
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3108
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 530
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.282e0

QD
type: SiteQuality
SIO_000300: 1.562e1

DP
type: SiteQuality
SIO_000300: 8.53071e5

MQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

GenotypeQuality
all individuals: 153
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 700
bin: 4.25e1
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GenotypeQuality
all individuals: 992
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 786
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
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variant carriers: 0

GenotypeQuality
all individuals: 449
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variant carriers: 0

GenotypeQuality
all individuals: 2049
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GenotypeQuality
all individuals: 4900
bin: 2.75e1
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GenotypeQuality
all individuals: 679
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 111
bin: 8.75e1
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GenotypeQuality
all individuals: 365
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variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1274
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5554
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.563966218329684e-4
allele num: 6394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3150
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 2.479052010511181e-4
allele num: 40338
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12806
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.41e0

MQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.62298e5

VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-3

QD
type: SiteQuality
SIO_000300: 1.395e1

FS
type: SiteQuality
SIO_000300: 2.875e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 25638
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2528
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 438
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GenotypeQuality
all individuals: 1309
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 365
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GenotypeQuality
all individuals: 923
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 8.75e1
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GenotypeQuality
all individuals: 669
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GenotypeQuality
all individuals: 716
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
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variant carriers: 0

GenotypeQuality
all individuals: 4883
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.451701480827695e-5
allele num: 40788
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3196
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 534
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.558e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.7e-3

QD
type: SiteQuality
SIO_000300: 4.75e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.67155e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.401e0

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.31e-1

GenotypeQuality
all individuals: 344
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1615
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4719
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14906
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4842
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 378
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1414
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.368096997253007e-5
allele num: 42228
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12982
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5968
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5672
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

FS
type: SiteQuality
SIO_000300: 2.522e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.067e0

VQSLOD
type: SiteQuality
SIO_000300: 2.3e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.63e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

DP
type: SiteQuality
SIO_000300: 8.91753e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e0

QD
type: SiteQuality
SIO_000300: 1.462e1

GenotypeQuality
all individuals: 732
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2377
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.631130458945028e-5
allele num: 43186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6228
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5812
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6752
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13078
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.39e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.082e0

MQRankSum
type: SiteQuality
SIO_000300: 2.38e0

DP
type: SiteQuality
SIO_000300: 9.10828e5

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.195e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.99e-1

GenotypeQuality
all individuals: 18864
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 257
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variant carriers: 0

GenotypeQuality
all individuals: 844
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variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 512
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 430
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variant carriers: 0

GenotypeQuality
all individuals: 3113
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1017
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variant carriers: 0

GenotypeQuality
all individuals: 25587
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3820
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.042733995179148e-5
allele num: 48954
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6726
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7692
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

FS
type: SiteQuality
SIO_000300: 4.31e0

DP
type: SiteQuality
SIO_000300: 1.039953e6

QD
type: SiteQuality
SIO_000300: 8.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.77e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.4e-2

GenotypeQuality
all individuals: 709
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2877
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variant carriers: 0

GenotypeQuality
all individuals: 114
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variant carriers: 0

GenotypeQuality
all individuals: 27219
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variant carriers: 0

GenotypeQuality
all individuals: 2853
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variant carriers: 0

GenotypeQuality
all individuals: 263
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variant carriers: 1

GenotypeQuality
all individuals: 1866
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variant carriers: 0

GenotypeQuality
all individuals: 72
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variant carriers: 0

GenotypeQuality
all individuals: 567
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variant carriers: 0

GenotypeQuality
all individuals: 921
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variant carriers: 0

GenotypeQuality
all individuals: 158
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variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 644
num of homozygotes: 0

East Asian
type: Population
allele count: 21
allele frequency: 3.047011027278003e-3
allele num: 6892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.9e-1

DP
type: SiteQuality
SIO_000300: 1.060011e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

FS
type: SiteQuality
SIO_000300: 3.471e0

MQRankSum
type: SiteQuality
SIO_000300: 2.69e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.16e-1

QD
type: SiteQuality
SIO_000300: 1.079e1

GenotypeQuality
all individuals: 536
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 876
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
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GenotypeQuality
all individuals: 28274
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1509
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 741
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variant carriers: 0

GenotypeQuality
all individuals: 17568
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1905
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 8.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3948
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.989258006763477e-5
allele num: 50270
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6968
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.54320987654321e-3
allele num: 648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8006
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13696
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.21e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

QD
type: SiteQuality
SIO_000300: 1.385e1

FS
type: SiteQuality
SIO_000300: 4.061e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-2

DP
type: SiteQuality
SIO_000300: 1.071158e6

GenotypeQuality
all individuals: 1509
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28274
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2717
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 115
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variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1905
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 672
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variant carriers: 1

GenotypeQuality
all individuals: 463
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 876
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8006
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6968
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.301401869158878e-5
allele num: 13696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3948
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50270
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-2

FS
type: SiteQuality
SIO_000300: 4.061e0

DP
type: SiteQuality
SIO_000300: 1.071158e6

MQ
type: SiteQuality
SIO_000300: 5.974e1

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-2

QD
type: SiteQuality
SIO_000300: 1.385e1

GenotypeQuality
all individuals: 741
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2680
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variant carriers: 0

GenotypeQuality
all individuals: 1905
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 9.25e1
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GenotypeQuality
all individuals: 672
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2717
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1509
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13696
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6968
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3948
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50270
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.249063202598052e-4
allele num: 8006
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

DP
type: SiteQuality
SIO_000300: 1.071158e6

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.385e1

FS
type: SiteQuality
SIO_000300: 4.061e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-2

GenotypeQuality
all individuals: 104
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
all individuals: 952
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
all individuals: 559
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GenotypeQuality
all individuals: 62
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.75e1
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GenotypeQuality
all individuals: 506
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variant carriers: 0

GenotypeQuality
all individuals: 35257
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variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 508
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variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8084
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14200
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.831434745980001e-5
allele num: 54602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9058
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4410
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.168037e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.11e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.243e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

QD
type: SiteQuality
SIO_000300: 6.2e0

MQRankSum
type: SiteQuality
SIO_000300: 6.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2388
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 3.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11640
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1145
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1328
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7774
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56078
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4604
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.389854065323141e-4
allele num: 14390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8296
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

QD
type: SiteQuality
SIO_000300: 8.119999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -4.91e-1

FS
type: SiteQuality
SIO_000300: 9.82e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.201804e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.166e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11640
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56078
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.205400192864031e-4
allele num: 8296
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14390
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7774
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9420
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.166e0

FS
type: SiteQuality
SIO_000300: 9.82e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e0

DP
type: SiteQuality
SIO_000300: 1.201804e6

MQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

QD
type: SiteQuality
SIO_000300: 8.119999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7792
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4630
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 724
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.939625260235948e-5
allele num: 14410
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e0

DP
type: SiteQuality
SIO_000300: 1.204918e6

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

QD
type: SiteQuality
SIO_000300: 1.035e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

MQ
type: SiteQuality
SIO_000300: 5.905e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.75e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.867e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56990
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4748
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 6.330716637123322e-4
allele num: 7898
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.143e0

MQRankSum
type: SiteQuality
SIO_000300: -1.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

QD
type: SiteQuality
SIO_000300: 1.136e1

MQ
type: SiteQuality
SIO_000300: 5.923e1

FS
type: SiteQuality
SIO_000300: 5.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

DP
type: SiteQuality
SIO_000300: 1.225888e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9664
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.756789993324198e-5
allele num: 56922
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.443e0

VQSLOD
type: SiteQuality
SIO_000300: -1.177e0

DP
type: SiteQuality
SIO_000300: 1.222594e6

MQRankSum
type: SiteQuality
SIO_000300: 4.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.232e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

QD
type: SiteQuality
SIO_000300: 1.124e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.74e-1

MQ
type: SiteQuality
SIO_000300: 5.896e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56922
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.906077348066299e-5
allele num: 14480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9664
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

MQ
type: SiteQuality
SIO_000300: 5.896e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.74e-1

DP
type: SiteQuality
SIO_000300: 1.222594e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.82e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.177e0

FS
type: SiteQuality
SIO_000300: 9.443e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.232e0

QD
type: SiteQuality
SIO_000300: 1.124e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.764975819831268e-5
allele num: 56658
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
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MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.35e-1

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.62e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.275510204081633e-4
allele num: 7840
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8424
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 56354
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4658
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14390
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.907e1

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.205317e6

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.29e0

MQRankSum
type: SiteQuality
SIO_000300: -1.63e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14128
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4508
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 704
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.629632318246162e-5
allele num: 55102
num of homozygotes: 0

African
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East Asian
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allele num: 7700
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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MQRankSum
type: SiteQuality
SIO_000300: 4.12e-1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4140
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 666
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7274
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52180
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.140771161305042e-4
allele num: 8766
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.627e0

DP
type: SiteQuality
SIO_000300: 1.050523e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 6.66e-1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 13310
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8722
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.857280617164898e-5
allele num: 51850
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.390047261606895e-4
allele num: 7194
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4120
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.177e0

DP
type: SiteQuality
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BaseQRankSum
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SIO_000300: -2.331e0

InbreedingCoeff
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SIO_000300: -4.2e-3

QD
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8176
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 49026
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.909514111143439e-4
allele num: 6874
num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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FS
type: SiteQuality
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MQRankSum
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VQSLOD
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InbreedingCoeff
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SIO_000300: -5.9e-3

DP
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.65e-1

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 7546
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 8.042464211034261e-5
allele num: 12434
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8052
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3772
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6800
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.067995698568947e-5
allele num: 48356
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.57e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.12e-1

ReadPosRankSum
type: SiteQuality
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DP
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SIO_000300: 8.72386e5

VQSLOD
type: SiteQuality
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InbreedingCoeff
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.889e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.72e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6738
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47826
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 7976
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12330
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.338329764453962e-4
allele num: 7472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.18e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

DP
type: SiteQuality
SIO_000300: 8.71573e5

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.928e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.034e0

VQSLOD
type: SiteQuality
SIO_000300: -6.87e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47292
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.49655791679138e-4
allele num: 6682
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3632
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7412
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
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InbreedingCoeff
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 8.36237e5

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.854e0

BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 3
allele frequency: 5.226480836236934e-4
allele num: 5740
num of homozygotes: 0

Other
type: Population
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39724
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2946
num of homozygotes: 0

MQ
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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SIO_000300: 1.36e-2

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 39784
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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East Asian
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African
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South Asian
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Latino
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allele frequency: 1.510574018126888e-4
allele num: 6620
num of homozygotes: 0

QD
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MQRankSum
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FS
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ReadPosRankSum
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MQ
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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SIO_000300: -1.25e-2

BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Non-Finnish)
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Latino
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East Asian
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African
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European (Finnish)
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South Asian
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FS
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QD
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BaseQRankSum
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ReadPosRankSum
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DP
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ClippingRankSum
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MQRankSum
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MQ
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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Other
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African
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South Asian
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 37784
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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MQ
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SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 7.11053e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.39e-2

FS
type: SiteQuality
SIO_000300: 2.643e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.031e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.699e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.604106512672441e-4
allele num: 6234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5308
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36994
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 468
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.49e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

QD
type: SiteQuality
SIO_000300: 1.029e1

FS
type: SiteQuality
SIO_000300: 3.323e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.39e-2

DP
type: SiteQuality
SIO_000300: 7.07274e5

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5210
num of homozygotes: 0

African
type: Population
allele count: 14
allele frequency: 2.28236061297685e-3
allele num: 6134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 464
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.662786830728301e-4
allele num: 6014
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2696
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36506
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 7.05998e5

ClippingRankSum
type: SiteQuality
SIO_000300: 7.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.64e-2

FS
type: SiteQuality
SIO_000300: 1.912e0

QD
type: SiteQuality
SIO_000300: 1.014e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.307e0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 132
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 464
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9406
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.662786830728301e-4
allele num: 6014
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6134
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5210
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2696
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36506
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.05998e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.9e-2

FS
type: SiteQuality
SIO_000300: 1.912e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.64e-2

QD
type: SiteQuality
SIO_000300: 1.014e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.307e0

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4105
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 133
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GenotypeQuality
all individuals: 1661
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.938735944164405e-4
allele num: 5158
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36206
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.49e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.371e0

MQRankSum
type: SiteQuality
SIO_000300: -6.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 1.66e0

DP
type: SiteQuality
SIO_000300: 7.05336e5

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.094e0

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 149
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.272727272727273e-4
allele num: 4400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 126
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.23e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.25e0

DP
type: SiteQuality
SIO_000300: 8.3349e4

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.51e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.854e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.78e-1

MQ
type: SiteQuality
SIO_000300: 5.833e1

VQSLOD
type: SiteQuality
SIO_000300: -1.312e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8
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GenotypeQuality
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GenotypeQuality
all individuals: 36
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GenotypeQuality
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bin: 9.75e1
variant carriers: 9

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 4.424778761061947e-3
allele num: 1582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 6.459948320413437e-4
allele num: 4644
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.57e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.83e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

QD
type: SiteQuality
SIO_000300: 1.279e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.43e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.02e-1

DP
type: SiteQuality
SIO_000300: 9.0206e4

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 126
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2072
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 82
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.672800267648043e-4
allele num: 5978
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.317e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.23e-1

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.2107e5

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.697e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2188
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 8.059316569954867e-4
allele num: 6204
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 106
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 84
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.96e-2

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.27903e5

QD
type: SiteQuality
SIO_000300: 8.699999999999999e0

FS
type: SiteQuality
SIO_000300: 1.702e0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.01e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.01e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2318
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 108
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 3.104625892579944e-4
allele num: 6442
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 88
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 4.41e-1

QD
type: SiteQuality
SIO_000300: 1.069e1

FS
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 772
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2304
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 88
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 104
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 140
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.840000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.13e0

QD
type: SiteQuality
SIO_000300: 1.13e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.42535e5

GenotypeQuality
all individuals: 1
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2288
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5952
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 4.385964912280702e-3
allele num: 228
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 140
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 100
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.977e0

DP
type: SiteQuality
SIO_000300: 1.51848e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.66e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

QD
type: SiteQuality
SIO_000300: 1.478e1

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 295
bin: 9.75e1
variant carriers: 61

GenotypeQuality
all individuals: 144
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 40
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 25
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 3

GenotypeQuality
all individuals: 26
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.31578947368421e-2
allele num: 76
num of homozygotes: 0

African
type: Population
allele count: 32
allele frequency: 1.509433962264151e-1
allele num: 212
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.785714285714286e-2
allele num: 56
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 3.077783995523223e-3
allele num: 3574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.793478260869565e-4
allele num: 1472
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.640000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.698e-1

MQ
type: SiteQuality
SIO_000300: 5.996e1

DP
type: SiteQuality
SIO_000300: 1.67386e5

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

FS
type: SiteQuality
SIO_000300: 5.987e0

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

GenotypeQuality
all individuals: 144
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 40
bin: 6.75e1
variant carriers: 4

GenotypeQuality
all individuals: 514
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 214
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 9.75e1
variant carriers: 18

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.797985450475658e-4
allele num: 3574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 6.793478260869565e-3
allele num: 1472
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.987e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 1.67386e5

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

MQ
type: SiteQuality
SIO_000300: 5.996e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.698e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

QD
type: SiteQuality
SIO_000300: 8.640000000000001e0

GenotypeQuality
all individuals: 410
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 514
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 5.595970900951316e-4
allele num: 3574
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.987e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.698e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

MQ
type: SiteQuality
SIO_000300: 5.996e1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

QD
type: SiteQuality
SIO_000300: 8.640000000000001e0

DP
type: SiteQuality
SIO_000300: 1.67386e5

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

GenotypeQuality
all individuals: 26
bin: 8.75e1
variant carriers: 25

GenotypeQuality
all individuals: 73
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 295
bin: 9.75e1
variant carriers: 212

GenotypeQuality
all individuals: 40
bin: 6.75e1
variant carriers: 14

GenotypeQuality
all individuals: 680
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 503
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 214
bin: 3.75e1
variant carriers: 5

Other
type: Population
allele count: 4
allele frequency: 7.142857142857142e-2
allele num: 56
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.947368421052631e-2
allele num: 76
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 5.660377358490566e-2
allele num: 212
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.666666666666667e-1
allele num: 6
num of homozygotes: 0

South Asian
type: Population
allele count: 180
allele frequency: 5.036373810856184e-2
allele num: 3574
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 4.166666666666666e-2
allele num: 120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 71
allele frequency: 4.823369565217391e-2
allele num: 1472
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

MQ
type: SiteQuality
SIO_000300: 5.996e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.698e-1

DP
type: SiteQuality
SIO_000300: 1.67386e5

FS
type: SiteQuality
SIO_000300: 5.987e0

QD
type: SiteQuality
SIO_000300: 8.640000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

MQ
type: SiteQuality
SIO_000300: 5.996e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

QD
type: SiteQuality
SIO_000300: 8.640000000000001e0

DP
type: SiteQuality
SIO_000300: 1.67386e5

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

FS
type: SiteQuality
SIO_000300: 5.987e0

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.698e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeQuality
all individuals: 5
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1318
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2818
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 250
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2098
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15378
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.67988e5

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.234e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.57e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
SIO_000300: 1.872e1

GenotypeQuality
all individuals: 15296
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4268
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5962
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 73
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8292
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3286
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2100
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2834
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15416
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.49e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.109e0

MQ
type: SiteQuality
SIO_000300: 5.848e1

FS
type: SiteQuality
SIO_000300: 2.788e0

DP
type: SiteQuality
SIO_000300: 4.69084e5

VQSLOD
type: SiteQuality
SIO_000300: 7.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

QD
type: SiteQuality
SIO_000300: 1.922e1

GenotypeQuality
all individuals: 5952
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4661
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4258
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15364
num of homozygotes: 0

East Asian
type: Population
allele count: 15
allele frequency: 7.035647279549718e-3
allele num: 2132
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2822
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 256
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8220
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3262
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.453e0

FS
type: SiteQuality
SIO_000300: 1.4761e1

MQ
type: SiteQuality
SIO_000300: 5.191e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

QD
type: SiteQuality
SIO_000300: 4.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.49e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.843e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.31e-1

DP
type: SiteQuality
SIO_000300: 4.70195e5

GenotypeQuality
all individuals: 7948
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1609
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4648
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2110
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2830
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.71322e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.55e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.42e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.16e0

QD
type: SiteQuality
SIO_000300: 9.76e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.76e-1

MQ
type: SiteQuality
SIO_000300: 5.896e1

GenotypeQuality
all individuals: 16153
bin: 2.25e1
variant carriers: 9

GenotypeQuality
all individuals: 1579
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 6020
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 764
bin: 4.25e1
variant carriers: 5

GenotypeQuality
all individuals: 313
bin: 6.75e1
variant carriers: 5

GenotypeQuality
all individuals: 945
bin: 4.75e1
variant carriers: 5

GenotypeQuality
all individuals: 29
bin: 8.25e1
variant carriers: 7

GenotypeQuality
all individuals: 152
bin: 5.75e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14960
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 4.132231404958678e-3
allele num: 242
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2762
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 6.289308176100629e-4
allele num: 3180
num of homozygotes: 0

East Asian
type: Population
allele count: 68
allele frequency: 3.333333333333333e-2
allele num: 2040
num of homozygotes: 4

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

South Asian
type: Population
allele count: 16
allele frequency: 1.976772918211021e-3
allele num: 8094
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.98e-1

FS
type: SiteQuality
SIO_000300: 7.07e-1

DP
type: SiteQuality
SIO_000300: 4.72653e5

VQSLOD
type: SiteQuality
SIO_000300: 3.81e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.56e-2

QD
type: SiteQuality
SIO_000300: 1.427e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2146
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2848
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.237930180737806e-4
allele num: 8078
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 254
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.766e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.54e0

DP
type: SiteQuality
SIO_000300: 4.8037e5

VQSLOD
type: SiteQuality
SIO_000300: -3.318e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.59e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.034e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.74e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15964
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.913752913752914e-4
allele num: 3432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2948
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2246
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 262
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.34e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.98051e5

VQSLOD
type: SiteQuality
SIO_000300: -2.336e-1

FS
type: SiteQuality
SIO_000300: 5.035e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.34e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.288e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e0

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 23
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16190
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2312
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3008
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 264
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

QD
type: SiteQuality
SIO_000300: 1.105e1

DP
type: SiteQuality
SIO_000300: 5.03765e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.24e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.06e-1

GenotypeQuality
all individuals: 4
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2209
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 4.177109440267335e-4
allele num: 2394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16746
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3134
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.01e0

MQRankSum
type: SiteQuality
SIO_000300: -6.63e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.0612e1

VQSLOD
type: SiteQuality
SIO_000300: -1.497e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.45e-1

DP
type: SiteQuality
SIO_000300: 5.16282e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.371e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

GenotypeQuality
all individuals: 25
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 533
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 82
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variant carriers: 0

GenotypeQuality
all individuals: 4221
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 3

GenotypeQuality
all individuals: 6
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 3
allele frequency: 1.211631663974152e-3
allele num: 2476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3212
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8702
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.83e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

QD
type: SiteQuality
SIO_000300: 1.289e1

FS
type: SiteQuality
SIO_000300: 1.165e0

DP
type: SiteQuality
SIO_000300: 5.35665e5

MQRankSum
type: SiteQuality
SIO_000300: -3.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.01e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.66e-1

GenotypeQuality
all individuals: 5784
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1947
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GenotypeQuality
all individuals: 608
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variant carriers: 0

GenotypeQuality
all individuals: 534
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variant carriers: 3

GenotypeQuality
all individuals: 67
bin: 9.75e1
variant carriers: 60

GenotypeQuality
all individuals: 204
bin: 5.25e1
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GenotypeQuality
all individuals: 471
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GenotypeQuality
all individuals: 44
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variant carriers: 3

GenotypeQuality
all individuals: 85
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variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 8.25e1
variant carriers: 6

European (Non-Finnish)
type: Population
allele count: 50
allele frequency: 2.692804825506247e-3
allele num: 18568
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 1.184834123222749e-3
allele num: 3376
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 6.756756756756757e-3
allele num: 296
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.118067978533095e-4
allele num: 8944
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2682
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 1.561686621551275e-3
allele num: 3842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.59e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.563e0

DP
type: SiteQuality
SIO_000300: 5.69919e5

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.57e0

QD
type: SiteQuality
SIO_000300: 1.383e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.88e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4228
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GenotypeQuality
all individuals: 87
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.311802825879103e-5
allele num: 18826
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3414
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2768
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3924
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9010
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

DP
type: SiteQuality
SIO_000300: 5.7505e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.69e-2

QD
type: SiteQuality
SIO_000300: 5.46e0

FS
type: SiteQuality
SIO_000300: 2.522e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.681e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.55e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 7520
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 536
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GenotypeQuality
all individuals: 91
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 914
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19112
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.579098067287044e-4
allele num: 2794
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3972
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9066
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

VQSLOD
type: SiteQuality
SIO_000300: -3.077e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.84e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.63e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e0

DP
type: SiteQuality
SIO_000300: 5.81811e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
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Latino
type: Population
allele count: 1
allele frequency: 2.42600679281902e-4
allele num: 4122
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19658
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.55e-2

QD
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BaseQRankSum
type: SiteQuality
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MQRankSum
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ClippingRankSum
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MQ
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.06e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 31
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GenotypeQuality
all individuals: 69
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GenotypeQuality
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GenotypeQuality
all individuals: 107
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GenotypeQuality
all individuals: 6
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 29
allele frequency: 3.122980831359035e-3
allele num: 9286
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 1
allele frequency: 3.324468085106383e-4
allele num: 3008
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

FS
type: SiteQuality
SIO_000300: 1.903e0

QD
type: SiteQuality
SIO_000300: 1.351e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-2

DP
type: SiteQuality
SIO_000300: 6.0796e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1