12-39720119-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39720119
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39720119
    reference: chr 12
allele count: 2
allele frequency: 1.731841640400402e-5
allele num: 115484
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3288A>G
  hgvsp: ENST00000544797.2:c.3288A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1100A>G
  hgvsp: ENST00000547108.1:c.1100A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.471A>G
  hgvsp: ENST00000551264.1:c.471A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1391A>G
  hgvsp: ENST00000552961.1:c.1391A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3309A>G
  hgvsp: ENST00000361961.3:c.3309A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3348A>G
  hgvsp: ENST00000361418.5:c.3348A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3348A>G
  hgvsp: ENST00000395670.3:c.3348A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3240A>G
  hgvsp: ENST00000541463.2:c.3240A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.370A>G
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2891
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3049
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3464
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val1116Val
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

12-39720121-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39720121
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39720121
    reference: chr 12
allele count: 1
allele frequency: 8.661608287426809e-6
allele num: 115452
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3346G>A
  hgvsp: ENSP00000354878.5:p.Val1116Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3346G>A
  hgvsp: ENSP00000379029.3:p.Val1116Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.469G>A
  hgvsp: ENSP00000448792.1:p.Val157Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3238G>A
  hgvsp: ENSP00000438075.2:p.Val1080Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3307G>A
  hgvsp: ENSP00000354851.3:p.Val1103Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1389G>A
  hgvsp: ENSP00000447765.1:p.Val464Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1098G>A
  hgvsp: ENSP00000449698.1:p.Val367Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.368G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3286G>A
  hgvsp: ENSP00000445606.2:p.Val1096Ile
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3430
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12965
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2902
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3016
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val1116Ile
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/12-39720130-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39720130
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39720131
    reference: chr 12
allele count: 1638
allele frequency: 1.469743736989448e-2
allele num: 111448
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.464-5dupT
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3281-5dupT
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1384-5dupT
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3336dupT
  hgvsp: ENSP00000379029.3:p.Val1113CysfsTer7
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.363-5dupT
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3341-5dupT
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1093-5dupT
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3302-5dupT
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3233-5dupT
  variant of: http://identifiers.org/hgnc/19349
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 1.75e1
  variant carriers: 231
genotype depth: GenotypeDepth
  all individuals: 6031
  bin: 1.25e1
  variant carriers: 93
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 7.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 24439
  bin: 2.25e1
  variant carriers: 325
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 3.75e1
  variant carriers: 130
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12052
  bin: 2.75e1
  variant carriers: 304
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 5.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 9.75e1
  variant carriers: 131
genotype depth: GenotypeDepth
  all individuals: 3025
  bin: 3.25e1
  variant carriers: 194
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 4.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 7.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1230
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.5e0
  variant carriers: 1
hgvs: p.Val1113CysfsTer7
num of homozygotes: 26
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

12-39720138-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39720138
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39720138
    reference: chr 12
allele count: 1
allele frequency: 9.557670986733952e-6
allele num: 104628
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3341-12A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3302-12A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1384-12A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.363-12A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3329A>G
  hgvsp: ENSP00000379029.3:p.His1110Arg
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.464-12A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1093-12A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3233-12A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3281-12A>G
  variant of: http://identifiers.org/hgnc/19349
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8045
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11547
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2393
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1083
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7851
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24863
  bin: 6.25e1
  variant carriers: 0
hgvs: p.His1110Arg
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

12-39720147-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39720147
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39720147
    reference: chr 12
allele count: 1
allele frequency: 1.01010101010101e-5
allele num: 99000
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3233-21A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.464-21A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3281-21A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.363-21A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3320A>T
  hgvsp: ENSP00000379029.3:p.Asp1107Val
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3302-21A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3341-21A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1384-21A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1093-21A>T
  variant of: http://identifiers.org/hgnc/19349
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16832
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7896
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10791
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10557
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3936
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7851
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp1107Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

12-39720148-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39720148
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39720148
    reference: chr 12
allele count: 9
allele frequency: 9.158068258135418e-5
allele num: 98274
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3341-22C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3320-1C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1384-22C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.363-22C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.464-22C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3281-22C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3302-22C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3233-22C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1093-22C>T
  variant of: http://identifiers.org/hgnc/19349
canonical: false
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10229
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7520
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3618
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10809
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20841
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3746
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7857
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1714
  bin: 6.75e1
  variant carriers: 0
hgvs: c.3320-1C>T
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

12-39720166-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39720166
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39720166
    reference: chr 12
allele count: 2
allele frequency: 2.25159300204895e-5
allele num: 88826
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1093-40A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3281-40A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1384-40A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3302-40A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3341-40A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3233-40A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.363-40A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.464-40A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3320-19A>G
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22416
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5056
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5263
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2875
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

12-39720167-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39720167
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39720167
    reference: chr 12
allele count: 1
allele frequency: 1.133195838904879e-5
allele num: 88246
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3341-41G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3281-41G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3233-41G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.363-41G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3302-41G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1384-41G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.464-41G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3320-20G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1093-41G>A
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3023
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22403
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7849
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1040
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24127
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

12-39720169-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39720169
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39720169
    reference: chr 12
allele count: 1
allele frequency: 1.145265472536534e-5
allele num: 87316
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3320-22G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1093-43G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.363-43G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3341-43G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3233-43G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3302-43G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3281-43G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.464-43G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1384-43G>A
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22411
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6161
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2380
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum

12-39720171-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39720171
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39720171
    reference: chr 12
allele count: 1
allele frequency: 1.16160208159093e-5
allele num: 86088
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1384-45C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.363-45C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3320-24C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3281-45C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1093-45C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3302-45C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.464-45C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3341-45C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3233-45C>T
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5618
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22352
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4437
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5447
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7851
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1564
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

12-39720171-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39720171
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39720170
    reference: chr 12
allele count: 1
allele frequency: 1.16160208159093e-5
allele num: 86088
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3341-46delA
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1093-46delA
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.464-46delA
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3233-46delA
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.363-46delA
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3320-25delA
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3302-46delA
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3281-46delA
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1384-46delA
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5618
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22352
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1186
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 843
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
reference allele: GT
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD

12-39720180-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39720180
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39720180
    reference: chr 12
allele count: 1
allele frequency: 1.210741700365644e-5
allele num: 82594
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3233-54C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3341-54C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3302-54C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.464-54C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1093-54C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.363-54C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3320-33C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1384-54C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3281-54C>G
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15837
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21494
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21942
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD

12-39720193-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39720193
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39720193
    reference: chr 12
allele count: 1
allele frequency: 1.348799568384138e-5
allele num: 74140
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3341-67T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3320-46T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1384-67T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3233-67T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1093-67T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3281-67T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3302-67T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.363-67T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.464-67T>C
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6662
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19066
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4114
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3367
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6605
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1386
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

12-39720194-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39720194
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39720194
    reference: chr 12
allele count: 1
allele frequency: 1.349454820252618e-5
allele num: 74104
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1384-68A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3341-68A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3233-68A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3281-68A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.464-68A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3320-47A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.363-68A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1093-68A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3302-68A>G
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19077
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18460
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3310
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 865
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3574
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6582
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7321
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

12-39723988-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39723988
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39723988
    reference: chr 12
allele count: 1
allele frequency: 8.285965232089886e-6
allele num: 120686
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3340+56A>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.*42A>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+560A>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+560A>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3232+56A>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+560A>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1383+56A>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+560A>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+560A>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3301+56A>C
  variant of: http://identifiers.org/hgnc/19349
canonical: false
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7284
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6192
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4961
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6964
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

12-39723991-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39723991
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39723991
    reference: chr 12
allele count: 3
allele frequency: 2.485665992774998e-5
allele num: 120692
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+557T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+557T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3340+53T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3232+53T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.*39T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1383+53T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+557T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+557T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3301+53T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+557T>C
  variant of: http://identifiers.org/hgnc/19349
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6191
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6985
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7586
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7733
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7286
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4960
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2171
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/12-39723992-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39723992
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39723992
    reference: chr 12
allele count: 1
allele frequency: 8.286926544683108e-6
allele num: 120672
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+556G>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3340+52G>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+556G>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+556G>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+556G>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.*38G>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1383+52G>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3232+52G>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3301+52G>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+556G>T
  variant of: http://identifiers.org/hgnc/19349
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6993
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6192
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4961
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7739
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7286
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7591
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3644
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

12-39723994-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39723994
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39723994
    reference: chr 12
allele count: 3
allele frequency: 2.485830764641543e-5
allele num: 120684
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+554T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3340+50T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+554T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.*36T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+554T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1383+50T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+554T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3301+50T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3232+50T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+554T>C
  variant of: http://identifiers.org/hgnc/19349
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4961
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7587
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7283
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

12-39724002-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724002
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724002
    reference: chr 12
allele count: 2
allele frequency: 1.656891009709381e-5
allele num: 120708
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1383+42A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+546A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+546A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.*28A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+546A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+546A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3340+42A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3232+42A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3301+42A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+546A>G
  variant of: http://identifiers.org/hgnc/19349
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7591
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7284
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4756
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4212
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8648
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

12-39724003-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724003
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724003
    reference: chr 12
allele count: 1
allele frequency: 8.285141427364165e-6
allele num: 120698
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.*27A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3301+41A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+545A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1383+41A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+545A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3232+41A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+545A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+545A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+545A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3340+41A>G
  variant of: http://identifiers.org/hgnc/19349
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7284
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7589
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4800
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8755
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3641
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

12-39724012-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724012
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724012
    reference: chr 12
allele count: 1
allele frequency: 8.281436332317477e-6
allele num: 120752
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+536A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+536A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1383+32A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3340+32A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+536A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+536A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.*18A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3301+32A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3232+32A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+536A>G
  variant of: http://identifiers.org/hgnc/19349
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7590
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7288
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7287
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2025
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

12-39724018-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724018
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724018
    reference: chr 12
allele count: 1
allele frequency: 8.280339162692104e-6
allele num: 120768
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1383+26T>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+530T>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3301+26T>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+530T>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.*12T>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3340+26T>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+530T>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3232+26T>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+530T>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+530T>A
  variant of: http://identifiers.org/hgnc/19349
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4963
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7812
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7588
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7366
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7285
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

12-39724024-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724024
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724024
    reference: chr 12
allele count: 1
allele frequency: 8.278693953241936e-6
allele num: 120792
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3340+20T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+524T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+524T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+524T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1383+20T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3301+20T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+524T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+524T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.*6T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3232+20T>C
  variant of: http://identifiers.org/hgnc/19349
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7287
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7589
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7825
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4963
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7413
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2162
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum

12-39724032-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724032
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724032
    reference: chr 12
allele count: 1
allele frequency: 8.279105194310599e-6
allele num: 120786
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+516T>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+516T>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.415T>A
  hgvsp: ENSP00000447070.1:p.Ter139LysextTer9
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3340+12T>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3301+12T>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1383+12T>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+516T>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+516T>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3232+12T>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+516T>A
  variant of: http://identifiers.org/hgnc/19349
canonical: false
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7286
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7828
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4963
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7587
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3637
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ter139LysextTer9
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

12-39724033-AACATACTT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724033
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724025
    reference: chr 12
allele count: 1
allele frequency: 8.278693953241936e-6
allele num: 120792
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.406_413delAAGTATGT
  hgvsp: ENSP00000447070.1:p.Lys136LeufsTer13
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  variant of: http://identifiers.org/hgnc/19349
canonical: false
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7483
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7287
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7589
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7828
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3559
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Lys136LeufsTer13
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: AACATACTT
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP

12-39724048-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724048
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724048
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 120824
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+500A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1379A>T
  hgvsp: ENST00000552961.1:c.1379A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3297A>T
  hgvsp: ENST00000361961.3:c.3297A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.399A>T
  hgvsp: ENST00000551066.1:c.399A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+500A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+500A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3228A>T
  hgvsp: ENST00000541463.2:c.3228A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3336A>T
  hgvsp: ENST00000361418.5:c.3336A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+500A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+500A>T
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 7525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7284
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5018
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7829
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4963
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7592
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro1112Pro
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

12-39724052-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724052
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724052
    reference: chr 12
allele count: 131
allele frequency: 1.084275521859325e-3
allele num: 120818
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+496T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+496T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.395T>C
  hgvsp: ENSP00000447070.1:p.Val132Ala
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3332T>C
  hgvsp: ENSP00000354878.5:p.Val1111Ala
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3224T>C
  hgvsp: ENSP00000438075.2:p.Val1075Ala
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3293T>C
  hgvsp: ENSP00000354851.3:p.Val1098Ala
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1375T>C
  hgvsp: ENSP00000447765.1:p.Val459Ala
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+496T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+496T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+496T>C
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 9.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 7525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6186
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 7802
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 7587
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4978
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 7275
  bin: 4.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val1111Ala
num of homozygotes: 1
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

12-39724053-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724053
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724053
    reference: chr 12
allele count: 2
allele frequency: 1.655382476121108e-5
allele num: 120818
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+495G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3331G>A
  hgvsp: ENSP00000354878.5:p.Val1111Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+495G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3223G>A
  hgvsp: ENSP00000438075.2:p.Val1075Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1374G>A
  hgvsp: ENSP00000447765.1:p.Val459Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+495G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.394G>A
  hgvsp: ENSP00000447070.1:p.Val132Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+495G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3292G>A
  hgvsp: ENSP00000354851.3:p.Val1098Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+495G>A
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7552
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7817
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7275
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3567
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Val1111Ile
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

12-39724054-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724054
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724054
    reference: chr 12
allele count: 6
allele frequency: 4.966311851275515e-5
allele num: 120814
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+494C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+494C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3222C>T
  hgvsp: ENST00000541463.2:c.3222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+494C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+494C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+494C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3330C>T
  hgvsp: ENST00000361418.5:c.3330C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.393C>T
  hgvsp: ENST00000551066.1:c.393C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3291C>T
  hgvsp: ENST00000361961.3:c.3291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1373C>T
  hgvsp: ENST00000552961.1:c.1373C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7824
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7605
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6192
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4933
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7274
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser1110Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/12-39724057-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724057
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724057
    reference: chr 12
allele count: 4
allele frequency: 3.31054574346581e-5
allele num: 120826
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3288T>G
  hgvsp: ENSP00000354851.3:p.Asp1096Glu
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+491T>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3219T>G
  hgvsp: ENSP00000438075.2:p.Asp1073Glu
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.390T>G
  hgvsp: ENSP00000447070.1:p.Asp130Glu
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+491T>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3327T>G
  hgvsp: ENSP00000354878.5:p.Asp1109Glu
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+491T>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1370T>G
  hgvsp: ENSP00000447765.1:p.Asp457Glu
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+491T>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+491T>G
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7811
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7273
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3643
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asp1109Glu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

12-39724063-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724063
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724063
    reference: chr 12
allele count: 2
allele frequency: 1.655437283758505e-5
allele num: 120814
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1364T>C
  hgvsp: ENST00000552961.1:c.1364T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+485T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3282T>C
  hgvsp: ENST00000361961.3:c.3282T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3321T>C
  hgvsp: ENST00000361418.5:c.3321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.384T>C
  hgvsp: ENST00000551066.1:c.384T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+485T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+485T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+485T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3213T>C
  hgvsp: ENST00000541463.2:c.3213T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+485T>C
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7272
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7814
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7602
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9129
  bin: 6.25e1
  variant carriers: 0
hgvs: c.3321T>C
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/12-39724065-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724065
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724065
    reference: chr 12
allele count: 1
allele frequency: 8.278008642241022e-6
allele num: 120802
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+483G>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+483G>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3212-1G>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.383-1G>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+483G>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3281-1G>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3320-1G>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1363-1G>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+483G>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+483G>T
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7273
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
hgvs: c.3320-1G>T
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP

12-39724068-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724068
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724068
    reference: chr 12
allele count: 11
allele frequency: 9.105960264900662e-5
allele num: 120800
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3281-4A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+480A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.383-4A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+480A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1363-4A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+480A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3212-4A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+480A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3320-4A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+480A>T
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7602
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7270
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2146
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: c.3320-4A>T
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

12-39724079-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724079
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724079
    reference: chr 12
allele count: 1
allele frequency: 8.28239659427852e-6
allele num: 120738
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+469C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.383-15C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3281-15C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3320-15C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1363-15C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3212-15C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+469C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+469C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+469C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+469C>T
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7823
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4968
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4348
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7595
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ

12-39724080-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724080
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724080
    reference: chr 12
allele count: 1
allele frequency: 8.28239659427852e-6
allele num: 120738
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.383-16G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1363-16G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3281-16G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3320-16G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+468G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+468G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3212-16G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+468G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+468G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+468G>A
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7822
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4967
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7596
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2414
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8730
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

12-39724087-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724087
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724087
    reference: chr 12
allele count: 11
allele frequency: 9.11139089523557e-5
allele num: 120728
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+461C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.383-23C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+461C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+461C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+461C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3212-23C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1363-23C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+461C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3320-23C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3281-23C>T
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4969
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7595
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2414
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2108
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/12-39724090-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724090
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724089
    reference: chr 12
allele count: 20
allele frequency: 1.656698861847882e-4
allele num: 120722
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+457delG
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+457delG
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3281-27delG
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.383-27delG
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+457delG
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1363-27delG
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3212-27delG
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3320-27delG
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+457delG
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+457delG
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7284
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7264
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7786
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6187
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7591
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4968
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3512
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: AC
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

12-39724107-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724107
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724107
    reference: chr 12
allele count: 1
allele frequency: 8.293111741387604e-6
allele num: 120582
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3212-43T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.383-43T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1363-43T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+441T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+441T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3281-43T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+441T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3320-43T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+441T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+441T>C
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6493
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6181
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4969
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS

12-39724505-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724505
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724505
    reference: chr 12
allele count: 1
allele frequency: 8.284180528862085e-6
allele num: 120712
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+43C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+43C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.382+43C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3319+43C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+43C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1362+43C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3211+43C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+43C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3280+43C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+43C>G
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14387
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10831
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10494
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3239
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

12-39724506-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724506
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724506
    reference: chr 12
allele count: 4
allele frequency: 3.313452617627568e-5
allele num: 120720
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3280+42G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+42G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.382+42G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+42G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3319+42G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+42G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3211+42G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1362+42G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+42G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+42G>A
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10691
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6337
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3232
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6806
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD

12-39724512-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724512
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724512
    reference: chr 12
allele count: 13
allele frequency: 1.076283675260378e-4
allele num: 120786
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3211+36A>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+36A>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+36A>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+36A>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+36A>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+36A>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.382+36A>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1362+36A>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3280+36A>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3319+36A>C
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10995
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11490
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6355
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14775
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4862
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/12-39724514-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724514
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724515
    reference: chr 12
allele count: 1
allele frequency: 8.278145695364238e-6
allele num: 120800
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3280+33dupT
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+33dupT
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1362+33dupT
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+33dupT
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3319+33dupT
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3211+33dupT
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+33dupT
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+33dupT
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+33dupT
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.382+33dupT
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11064
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6366
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14896
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2660
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum

12-39724536-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724536
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724536
    reference: chr 12
allele count: 1
allele frequency: 8.264189613566494e-6
allele num: 121004
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3211+12T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3280+12T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.362+12T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3280+12T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3319+12T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3319+12T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1092+12T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1362+12T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.382+12T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.463+12T>C
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15314
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12118
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6369
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16830
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP

12-39724546-A-ACCTTGTAAAGCATGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724546
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724561
    reference: chr 12
allele count: 3
allele frequency: 2.477373323644051e-5
allele num: 121096
alternate allele: ACCTTGTAAAGCATGG
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: splice donor
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11233
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3537
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6368
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12151
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15391
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1940
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16831
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2673
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7109
  bin: 6.75e1
  variant carriers: 0
hgvs: c.3306_3319+1dupCCATGCTTTACAAGG
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

12-39724566-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724566
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724566
    reference: chr 12
allele count: 5
allele frequency: 4.125344466262933e-5
allele num: 121202
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.445C>A
  hgvsp: ENSP00000448792.1:p.Leu149Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.344C>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3262C>A
  hgvsp: ENSP00000445606.2:p.Leu1088Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3262C>A
  hgvsp: ENSP00000354851.3:p.Leu1088Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3301C>A
  hgvsp: ENSP00000354878.5:p.Leu1101Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1074C>A
  hgvsp: ENSP00000449698.1:p.Leu359Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.364C>A
  hgvsp: ENSP00000447070.1:p.Leu122Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3193C>A
  hgvsp: ENSP00000438075.2:p.Leu1065Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1344C>A
  hgvsp: ENSP00000447765.1:p.Leu449Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3301C>A
  hgvsp: ENSP00000379029.3:p.Leu1101Ile
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6372
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12137
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15490
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11255
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4153
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu1101Ile
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

12-39724572-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724572
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724572
    reference: chr 12
allele count: 1
allele frequency: 8.249736008447729e-6
allele num: 121216
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1338G>A
  hgvsp: ENSP00000447765.1:p.Ala447Thr
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.439G>A
  hgvsp: ENSP00000448792.1:p.Ala147Thr
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.358G>A
  hgvsp: ENSP00000447070.1:p.Ala120Thr
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3295G>A
  hgvsp: ENSP00000379029.3:p.Ala1099Thr
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3295G>A
  hgvsp: ENSP00000354878.5:p.Ala1099Thr
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3256G>A
  hgvsp: ENSP00000354851.3:p.Ala1086Thr
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1068G>A
  hgvsp: ENSP00000449698.1:p.Ala357Thr
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3256G>A
  hgvsp: ENSP00000445606.2:p.Ala1086Thr
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.338G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3187G>A
  hgvsp: ENSP00000438075.2:p.Ala1063Thr
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12119
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11260
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19513
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala1099Thr
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

12-39724577-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724577
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724577
    reference: chr 12
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.353T>C
  hgvsp: ENSP00000447070.1:p.Leu118Pro
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3251T>C
  hgvsp: ENSP00000354851.3:p.Leu1084Pro
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3182T>C
  hgvsp: ENSP00000438075.2:p.Leu1061Pro
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.434T>C
  hgvsp: ENSP00000448792.1:p.Leu145Pro
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1063T>C
  hgvsp: ENSP00000449698.1:p.Leu355Pro
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3290T>C
  hgvsp: ENSP00000354878.5:p.Leu1097Pro
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3251T>C
  hgvsp: ENSP00000445606.2:p.Leu1084Pro
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1333T>C
  hgvsp: ENSP00000447765.1:p.Leu445Pro
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.333T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3290T>C
  hgvsp: ENSP00000379029.3:p.Leu1097Pro
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15518
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12115
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11260
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3537
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu1097Pro
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

12-39724617-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724617
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724617
    reference: chr 12
allele count: 1
allele frequency: 8.247694769311978e-6
allele num: 121246
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3211T>C
  hgvsp: ENSP00000445606.2:p.Phe1071Leu
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.394T>C
  hgvsp: ENSP00000448792.1:p.Phe132Leu
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3142T>C
  hgvsp: ENSP00000438075.2:p.Phe1048Leu
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3250T>C
  hgvsp: ENSP00000379029.3:p.Phe1084Leu
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.293T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3211T>C
  hgvsp: ENSP00000354851.3:p.Phe1071Leu
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.313T>C
  hgvsp: ENSP00000447070.1:p.Phe105Leu
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3250T>C
  hgvsp: ENSP00000354878.5:p.Phe1084Leu
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1293T>C
  hgvsp: ENSP00000447765.1:p.Phe432Leu
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1023T>C
  hgvsp: ENSP00000449698.1:p.Phe342Leu
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11273
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6381
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Phe1084Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

12-39724619-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724619
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724619
    reference: chr 12
allele count: 1
allele frequency: 8.247422680412371e-6
allele num: 121250
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1291T>C
  hgvsp: ENSP00000447765.1:p.Leu431Ser
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1021T>C
  hgvsp: ENSP00000449698.1:p.Leu341Ser
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.291T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3209T>C
  hgvsp: ENSP00000354851.3:p.Leu1070Ser
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.392T>C
  hgvsp: ENSP00000448792.1:p.Leu131Ser
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3140T>C
  hgvsp: ENSP00000438075.2:p.Leu1047Ser
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3248T>C
  hgvsp: ENSP00000379029.3:p.Leu1083Ser
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3248T>C
  hgvsp: ENSP00000354878.5:p.Leu1083Ser
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3209T>C
  hgvsp: ENSP00000445606.2:p.Leu1070Ser
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.311T>C
  hgvsp: ENSP00000447070.1:p.Leu104Ser
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11273
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6380
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15582
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu1083Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum

12-39724621-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724621
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724621
    reference: chr 12
allele count: 23
allele frequency: 1.896875927819747e-4
allele num: 121252
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1019C>T
  hgvsp: ENST00000547108.1:c.1019C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.390C>T
  hgvsp: ENST00000551264.1:c.390C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.309C>T
  hgvsp: ENST00000551066.1:c.309C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3138C>T
  hgvsp: ENST00000541463.2:c.3138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3246C>T
  hgvsp: ENST00000361418.5:c.3246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3207C>T
  hgvsp: ENST00000361961.3:c.3207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3207C>T
  hgvsp: ENST00000544797.2:c.3207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.289C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1289C>T
  hgvsp: ENST00000552961.1:c.1289C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3246C>T
  hgvsp: ENST00000395670.3:c.3246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6379
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12032
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu1082Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

12-39724631-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724631
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724631
    reference: chr 12
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1279A>C
  hgvsp: ENSP00000447765.1:p.Gln427Pro
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.279A>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3197A>C
  hgvsp: ENSP00000354851.3:p.Gln1066Pro
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3236A>C
  hgvsp: ENSP00000379029.3:p.Gln1079Pro
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3236A>C
  hgvsp: ENSP00000354878.5:p.Gln1079Pro
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.299A>C
  hgvsp: ENSP00000447070.1:p.Gln100Pro
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.1009A>C
  hgvsp: ENSP00000449698.1:p.Gln337Pro
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3197A>C
  hgvsp: ENSP00000445606.2:p.Gln1066Pro
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.380A>C
  hgvsp: ENSP00000448792.1:p.Gln127Pro
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3128A>C
  hgvsp: ENSP00000438075.2:p.Gln1043Pro
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6379
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12019
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11285
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15600
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln1079Pro
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

12-39724643-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724643
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724643
    reference: chr 12
allele count: 1
allele frequency: 8.245382585751979e-6
allele num: 121280
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.368C>T
  hgvsp: ENSP00000448792.1:p.Thr123Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.287C>T
  hgvsp: ENSP00000447070.1:p.Thr96Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.997C>T
  hgvsp: ENSP00000449698.1:p.Thr333Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3224C>T
  hgvsp: ENSP00000354878.5:p.Thr1075Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3185C>T
  hgvsp: ENSP00000354851.3:p.Thr1062Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3224C>T
  hgvsp: ENSP00000379029.3:p.Thr1075Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3185C>T
  hgvsp: ENSP00000445606.2:p.Thr1062Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1267C>T
  hgvsp: ENSP00000447765.1:p.Thr423Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3116C>T
  hgvsp: ENSP00000438075.2:p.Thr1039Ile
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.267C>T
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6379
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7135
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr1075Ile
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

12-39724650-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724650
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724650
    reference: chr 12
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.260G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3178G>A
  hgvsp: ENSP00000445606.2:p.Glu1060Lys
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1260G>A
  hgvsp: ENSP00000447765.1:p.Glu421Lys
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.990G>A
  hgvsp: ENSP00000449698.1:p.Glu331Lys
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.361G>A
  hgvsp: ENSP00000448792.1:p.Glu121Lys
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3217G>A
  hgvsp: ENSP00000379029.3:p.Glu1073Lys
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3109G>A
  hgvsp: ENSP00000438075.2:p.Glu1037Lys
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3178G>A
  hgvsp: ENSP00000354851.3:p.Glu1060Lys
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3217G>A
  hgvsp: ENSP00000354878.5:p.Glu1073Lys
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.280G>A
  hgvsp: ENSP00000447070.1:p.Glu94Lys
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11984
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3537
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu1073Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

12-39724653-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724653
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724653
    reference: chr 12
allele count: 3
allele frequency: 2.473492406378312e-5
allele num: 121286
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3175A>G
  hgvsp: ENSP00000445606.2:p.Thr1059Ala
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.257A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3214A>G
  hgvsp: ENSP00000379029.3:p.Thr1072Ala
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.987A>G
  hgvsp: ENSP00000449698.1:p.Thr330Ala
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3214A>G
  hgvsp: ENSP00000354878.5:p.Thr1072Ala
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.358A>G
  hgvsp: ENSP00000448792.1:p.Thr120Ala
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3175A>G
  hgvsp: ENSP00000354851.3:p.Thr1059Ala
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.277A>G
  hgvsp: ENSP00000447070.1:p.Thr93Ala
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1257A>G
  hgvsp: ENSP00000447765.1:p.Thr420Ala
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3106A>G
  hgvsp: ENSP00000438075.2:p.Thr1036Ala
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11284
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11988
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19548
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr1072Ala
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

12-39724665-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724665
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724665
    reference: chr 12
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3163C>T
  hgvsp: ENSP00000445606.2:p.Arg1055Ter
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3094C>T
  hgvsp: ENSP00000438075.2:p.Arg1032Ter
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3202C>T
  hgvsp: ENSP00000379029.3:p.Arg1068Ter
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3163C>T
  hgvsp: ENSP00000354851.3:p.Arg1055Ter
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.975C>T
  hgvsp: ENSP00000449698.1:p.Arg326Ter
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.265C>T
  hgvsp: ENSP00000447070.1:p.Arg89Ter
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.346C>T
  hgvsp: ENSP00000448792.1:p.Arg116Ter
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.245C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3202C>T
  hgvsp: ENSP00000354878.5:p.Arg1068Ter
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1245C>T
  hgvsp: ENSP00000447765.1:p.Arg416Ter
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11291
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11973
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19547
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg1068Ter
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

12-39724673-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724673
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724673
    reference: chr 12
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3194T>A
  hgvsp: ENSP00000379029.3:p.Leu1065Gln
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3155T>A
  hgvsp: ENSP00000445606.2:p.Leu1052Gln
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.967T>A
  hgvsp: ENSP00000449698.1:p.Leu323Gln
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3086T>A
  hgvsp: ENSP00000438075.2:p.Leu1029Gln
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3155T>A
  hgvsp: ENSP00000354851.3:p.Leu1052Gln
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1237T>A
  hgvsp: ENSP00000447765.1:p.Leu413Gln
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3194T>A
  hgvsp: ENSP00000354878.5:p.Leu1065Gln
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.257T>A
  hgvsp: ENSP00000447070.1:p.Leu86Gln
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.338T>A
  hgvsp: ENSP00000448792.1:p.Leu113Gln
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.237T>A
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11977
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu1065Gln
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

12-39724677-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724677
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724678
    reference: chr 12
allele count: 1
allele frequency: 8.244974687927709e-6
allele num: 121286
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.962dupA
  hgvsp: ENSP00000449698.1:p.Val322SerfsTer33
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.252dupA
  hgvsp: ENSP00000447070.1:p.Val85SerfsTer33
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3189dupA
  hgvsp: ENSP00000354878.5:p.Val1064SerfsTer33
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1232dupA
  hgvsp: ENSP00000447765.1:p.Val412SerfsTer33
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3150dupA
  hgvsp: ENSP00000445606.2:p.Val1051SerfsTer33
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3150dupA
  hgvsp: ENSP00000354851.3:p.Val1051SerfsTer33
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3081dupA
  hgvsp: ENSP00000438075.2:p.Val1028SerfsTer33
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3189dupA
  hgvsp: ENSP00000379029.3:p.Val1064SerfsTer33
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.232dupA
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.333dupA
  hgvsp: ENSP00000448792.1:p.Val112SerfsTer33
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 11281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16829
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Val1064SerfsTer33
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

12-39724678-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724678
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724678
    reference: chr 12
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.232A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.333A>G
  hgvsp: ENST00000551264.1:c.333A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3150A>G
  hgvsp: ENST00000361961.3:c.3150A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.962A>G
  hgvsp: ENST00000547108.1:c.962A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3081A>G
  hgvsp: ENST00000541463.2:c.3081A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3189A>G
  hgvsp: ENST00000361418.5:c.3189A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3189A>G
  hgvsp: ENST00000395670.3:c.3189A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3150A>G
  hgvsp: ENST00000544797.2:c.3150A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1232A>G
  hgvsp: ENST00000552961.1:c.1232A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.252A>G
  hgvsp: ENST00000551066.1:c.252A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Lys1063Lys
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

12-39724690-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724690
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724690
    reference: chr 12
allele count: 4
allele frequency: 3.298098646130506e-5
allele num: 121282
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3177G>A
  hgvsp: ENST00000395670.3:c.3177G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3177G>A
  hgvsp: ENST00000361418.5:c.3177G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3138G>A
  hgvsp: ENST00000544797.2:c.3138G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3138G>A
  hgvsp: ENST00000361961.3:c.3138G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.321G>A
  hgvsp: ENST00000551264.1:c.321G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.950G>A
  hgvsp: ENST00000547108.1:c.950G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1220G>A
  hgvsp: ENST00000552961.1:c.1220G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.240G>A
  hgvsp: ENST00000551066.1:c.240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.220G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3069G>A
  hgvsp: ENST00000541463.2:c.3069G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15648
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6381
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4922
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu1059Glu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD

12-39724693-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724693
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724693
    reference: chr 12
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.318A>G
  hgvsp: ENST00000551264.1:c.318A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.947A>G
  hgvsp: ENST00000547108.1:c.947A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3174A>G
  hgvsp: ENST00000395670.3:c.3174A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3174A>G
  hgvsp: ENST00000361418.5:c.3174A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3135A>G
  hgvsp: ENST00000361961.3:c.3135A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.217A>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1217A>G
  hgvsp: ENST00000552961.1:c.1217A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.237A>G
  hgvsp: ENST00000551066.1:c.237A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3066A>G
  hgvsp: ENST00000541463.2:c.3066A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3135A>G
  hgvsp: ENST00000544797.2:c.3135A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6380
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Lys1058Lys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

12-39724703-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724703
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724703
    reference: chr 12
allele count: 1
allele frequency: 8.249463784853985e-6
allele num: 121220
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.227C>T
  hgvsp: ENSP00000447070.1:p.Ala76Val
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.937C>T
  hgvsp: ENSP00000449698.1:p.Ala313Val
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3164C>T
  hgvsp: ENSP00000379029.3:p.Ala1055Val
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1207C>T
  hgvsp: ENSP00000447765.1:p.Ala403Val
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3056C>T
  hgvsp: ENSP00000438075.2:p.Ala1019Val
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3164C>T
  hgvsp: ENSP00000354878.5:p.Ala1055Val
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3125C>T
  hgvsp: ENSP00000354851.3:p.Ala1042Val
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.207C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.308C>T
  hgvsp: ENSP00000448792.1:p.Ala103Val
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3125C>T
  hgvsp: ENSP00000445606.2:p.Ala1042Val
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11894
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16825
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ala1055Val
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/12-39724705-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724705
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724705
    reference: chr 12
allele count: 1
allele frequency: 8.252050634582693e-6
allele num: 121182
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3162G>T
  hgvsp: ENSP00000354878.5:p.Gln1054His
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3162G>T
  hgvsp: ENSP00000379029.3:p.Gln1054His
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3123G>T
  hgvsp: ENSP00000354851.3:p.Gln1041His
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.306G>T
  hgvsp: ENSP00000448792.1:p.Gln102His
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3123G>T
  hgvsp: ENSP00000445606.2:p.Gln1041His
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.205G>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.225G>T
  hgvsp: ENSP00000447070.1:p.Gln75His
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.935G>T
  hgvsp: ENSP00000449698.1:p.Gln312His
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1205G>T
  hgvsp: ENSP00000447765.1:p.Gln402His
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3054G>T
  hgvsp: ENSP00000438075.2:p.Gln1018His
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11262
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15612
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11859
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln1054His
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum

12-39724719-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724719
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724719
    reference: chr 12
allele count: 1
allele frequency: 8.257092842751923e-6
allele num: 121108
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3115-6T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3115-6T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.197-6T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.927-6T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3154-6T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1197-6T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3154-6T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.217-6T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.298-6T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3046-6T>C
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11786
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15562
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6355
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
hgvs: c.3154-6T>C
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

12-39724720-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724720
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724720
    reference: chr 12
allele count: 3
allele frequency: 2.477209671026556e-5
allele num: 121104
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3154-7G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.217-7G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1197-7G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.927-7G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3154-7G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3115-7G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3115-7G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.298-7G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.197-7G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3046-7G>A
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11778
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6358
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15563
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
hgvs: c.3154-7G>A
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP

12-39724737-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724737
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724737
    reference: chr 12
allele count: 1
allele frequency: 8.269793751343841e-6
allele num: 120922
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1197-24A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.197-24A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3154-24A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.927-24A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.298-24A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3115-24A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3046-24A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3115-24A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3154-24A>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.217-24A>T
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11179
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6356
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4132
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16818
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff

12-39724739-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724739
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724739
    reference: chr 12
allele count: 1
allele frequency: 8.272803984182399e-6
allele num: 120878
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.298-26T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1197-26T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3154-26T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3115-26T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3115-26T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.927-26T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.217-26T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3046-26T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3154-26T>C
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.197-26T>C
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10807
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11101
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15108
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3273
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1932
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS

12-39724740-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724740
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724740
    reference: chr 12
allele count: 2
allele frequency: 1.654697686732634e-5
allele num: 120868
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1197-27C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.927-27C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.298-27C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3115-27C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.197-27C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3154-27C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3046-27C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.217-27C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3154-27C>G
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3115-27C>G
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6349
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15107
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11101
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2665
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

12-39724747-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724747
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724747
    reference: chr 12
allele count: 2
allele frequency: 1.656204971927326e-5
allele num: 120758
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.927-34G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3154-34G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.217-34G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3115-34G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.197-34G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3115-34G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3046-34G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.298-34G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1197-34G>A
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3154-34G>A
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10327
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10948
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2668
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

12-39724748-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 39724748
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 39724748
    reference: chr 12
allele count: 6
allele frequency: 4.969355640218652e-5
allele num: 120740
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000449698
  ensembl transcript: ENST00000547108
  gene symbol: KIF21A
  hgvsc: ENST00000547108.1:c.927-35C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000438075
  ensembl transcript: ENST00000541463
  gene symbol: KIF21A
  hgvsc: ENST00000541463.2:c.3046-35C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000448792
  ensembl transcript: ENST00000551264
  gene symbol: KIF21A
  hgvsc: ENST00000551264.1:c.298-35C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447765
  ensembl transcript: ENST00000552961
  gene symbol: KIF21A
  hgvsc: ENST00000552961.1:c.1197-35C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354878
  ensembl transcript: ENST00000361418
  gene symbol: KIF21A
  hgvsc: ENST00000361418.5:c.3154-35C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000447070
  ensembl transcript: ENST00000551066
  gene symbol: KIF21A
  hgvsc: ENST00000551066.1:c.217-35C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000379029
  ensembl transcript: ENST00000395670
  gene symbol: KIF21A
  hgvsc: ENST00000395670.3:c.3154-35C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000354851
  ensembl transcript: ENST00000361961
  gene symbol: KIF21A
  hgvsc: ENST00000361961.3:c.3115-35C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl protein: ENSP00000445606
  ensembl transcript: ENST00000544797
  gene symbol: KIF21A
  hgvsc: ENST00000544797.2:c.3115-35C>T
  variant of: http://identifiers.org/hgnc/19349
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000139116
  ensembl transcript: ENST00000552475
  gene symbol: KIF21A
  hgvsc: ENST00000552475.1:n.197-35C>T
  variant of: http://identifiers.org/hgnc/19349
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14538
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10248
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10887
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3523
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6314
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4124
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 37697
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5511
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 795
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7882
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 324
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10030
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.968609865470852e-5
allele num: 11150
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.583531274742676e-5
allele num: 63150
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e0

QD
type: SiteQuality
SIO_000300: 1.365e1

DP
type: SiteQuality
SIO_000300: 1.799283e6

MQ
type: SiteQuality
SIO_000300: 5.948e1

FS
type: SiteQuality
SIO_000300: 5.403e0

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

GenotypeQuality
all individuals: 662
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38260
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 790
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5539
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7881
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 260
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3451
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63142
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10032
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11144
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.1936022917164e-4
allele num: 8378
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.3e-1

QD
type: SiteQuality
SIO_000300: 1.298e1

DP
type: SiteQuality
SIO_000300: 1.798824e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.505e0

MQRankSum
type: SiteQuality
SIO_000300: -9.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

GenotypeQuality
all individuals: 611
bin: 7.75e1
variant carriers: 4

GenotypeQuality
all individuals: 9224
bin: 9.75e1
variant carriers: 1535

GenotypeQuality
all individuals: 82
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 141
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1202
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 215
bin: 8.75e1
variant carriers: 15

GenotypeQuality
all individuals: 279
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 106
bin: 1.75e1
variant carriers: 4

GenotypeQuality
all individuals: 406
bin: 5.75e1
variant carriers: 6

GenotypeQuality
all individuals: 343
bin: 5.25e1
variant carriers: 6

GenotypeQuality
all individuals: 327
bin: 9.25e1
variant carriers: 16

GenotypeQuality
all individuals: 229
bin: 4.25e1
variant carriers: 8

GenotypeQuality
all individuals: 530
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3168
bin: 6.75e1
variant carriers: 6

GenotypeQuality
all individuals: 8629
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32936
bin: 6.25e1
variant carriers: 7

GenotypeQuality
all individuals: 571
bin: 7.25e1
variant carriers: 9

East Asian
type: Population
allele count: 1
allele frequency: 1.227596366314756e-4
allele num: 8146
num of homozygotes: 0

South Asian
type: Population
allele count: 138
allele frequency: 9.180415114422566e-3
allele num: 15032
num of homozygotes: 2

Other
type: Population
allele count: 11
allele frequency: 1.31578947368421e-2
allele num: 836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 99
allele frequency: 1.604538087520259e-2
allele num: 6170
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 1291
allele frequency: 2.129589917851605e-2
allele num: 60622
num of homozygotes: 22

Latino
type: Population
allele count: 59
allele frequency: 5.427782888684452e-3
allele num: 10870
num of homozygotes: 0

African
type: Population
allele count: 39
allele frequency: 3.990994678673762e-3
allele num: 9772
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.755001e6

MQRankSum
type: SiteQuality
SIO_000300: 2.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.59e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.65e-1

QD
type: SiteQuality
SIO_000300: 1.164e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15321
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2148
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2481
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56300
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.914672935970129e-5
allele num: 14462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.48e-1

FS
type: SiteQuality
SIO_000300: 4.409e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

MQ
type: SiteQuality
SIO_000300: 5.961e1

QD
type: SiteQuality
SIO_000300: 1.115e1

DP
type: SiteQuality
SIO_000300: 1.619685e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.52e-1

GenotypeQuality
all individuals: 20380
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16631
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1757
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1785
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3606
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9582
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5692
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.889287738522577e-5
allele num: 52930
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7176
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8936
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13932
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

DP
type: SiteQuality
SIO_000300: 1.495901e6

VQSLOD
type: SiteQuality
SIO_000300: 3.02e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
SIO_000300: 1.197e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.134e0

GenotypeQuality
all individuals: 465
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15652
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1869
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4092
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7126
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52472
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 6.492569614774203e-4
allele num: 13862
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.39e-1

QD
type: SiteQuality
SIO_000300: 1.141e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.6e-1

FS
type: SiteQuality
SIO_000300: 2.857e0

DP
type: SiteQuality
SIO_000300: 1.482941e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.856e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e-1

GenotypeQuality
all individuals: 259
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1015
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6008
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5290
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.274052228918238e-5
allele num: 46794
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8246
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6350
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12960
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

QD
type: SiteQuality
SIO_000300: 1.241e1

FS
type: SiteQuality
SIO_000300: 1.096e0

MQRankSum
type: SiteQuality
SIO_000300: 7.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.05e-1

DP
type: SiteQuality
SIO_000300: 1.320982e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 7.729169887154119e-5
allele num: 12938
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6282
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8206
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46414
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 704
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5284
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.887e1

FS
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VQSLOD
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InbreedingCoeff
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SIO_000300: -6.2e-3

MQRankSum
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SIO_000300: -1.18e-1

MQ
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SIO_000300: 5.843e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.061e0

DP
type: SiteQuality
SIO_000300: 1.316769e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.239e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.25e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6220
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8122
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.182357819388067e-5
allele num: 45822
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.932e0

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.359e-1

ClippingRankSum
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SIO_000300: -1.186e0

DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.220741727737064e-5
allele num: 45030
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8040
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12784
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5206
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

DP
type: SiteQuality
SIO_000300: 1.293629e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.18e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.291e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6138
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.220741727737064e-5
allele num: 45030
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8040
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12784
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5206
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8196
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.293629e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.291e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.3285055651283e-5
allele num: 42946
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7796
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7802
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5830
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5064
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.41e-1

MQ
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 1.385041551246538e-4
allele num: 7220
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4608
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 38018
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.57e0

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
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QD
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 8.387854386847844e-5
allele num: 11922
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7224
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37998
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6688
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4602
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East Asian
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Other
type: Population
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.02e0

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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MQ
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DP
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 195
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.745845723281441e-5
allele num: 11434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

MQRankSum
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SIO_000300: -1.275e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.34e0

FS
type: SiteQuality
SIO_000300: 7.36e0

QD
type: SiteQuality
SIO_000300: 1.025e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.822e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e0

MQ
type: SiteQuality
SIO_000300: 5.929e1

DP
type: SiteQuality
SIO_000300: 2.702898e6

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66400
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.920560747663551e-4
allele num: 10272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.976e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

VQSLOD
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SIO_000300: 1.84e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.17e0

ReadPosRankSum
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SIO_000300: 1.24e0

ClippingRankSum
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SIO_000300: 2.97e-1

QD
type: SiteQuality
SIO_000300: 1.187e1

FS
type: SiteQuality
SIO_000300: 2.585e0

DP
type: SiteQuality
SIO_000300: 2.704356e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.742787200559538e-5
allele num: 11438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66396
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.252e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.18e-1

DP
type: SiteQuality
SIO_000300: 2.705056e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -8.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.8e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.947040498442368e-4
allele num: 10272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506160195198361e-5
allele num: 66394
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

FS
type: SiteQuality
SIO_000300: 2.762e0

MQRankSum
type: SiteQuality
SIO_000300: -5.9e-2

QD
type: SiteQuality
SIO_000300: 1.316e1

DP
type: SiteQuality
SIO_000300: 2.706152e6

MQ
type: SiteQuality
SIO_000300: 5.934e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.239e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.011231894968231e-5
allele num: 66418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.36e-1

FS
type: SiteQuality
SIO_000300: 1.258e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.14e-2

DP
type: SiteQuality
SIO_000300: 2.709918e6

MQRankSum
type: SiteQuality
SIO_000300: 7.63e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e0

QD
type: SiteQuality
SIO_000300: 1.228e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
type: Population
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allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.505706628120577e-5
allele num: 66414
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.01e-1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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QD
type: SiteQuality
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DP
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
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allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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allele frequency: 6.074596039363382e-5
allele num: 16462
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66436
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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QD
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MQ
type: SiteQuality
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ClippingRankSum
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VQSLOD
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FS
type: SiteQuality
SIO_000300: 4.843e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.41e-1

BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.074596039363382e-5
allele num: 16462
num of homozygotes: 0

InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
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MQRankSum
type: SiteQuality
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MQ
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FS
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66456
num of homozygotes: 0

Other
type: Population
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South Asian
type: Population
allele count: 1
allele frequency: 6.072382803011902e-5
allele num: 16468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
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African
type: Population
allele count: 0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.79e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 9.81e-1

QD
type: SiteQuality
SIO_000300: 1.156e1

DP
type: SiteQuality
SIO_000300: 2.717786e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.427e0

GenotypeQuality
all individuals: 96
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4257
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3560
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3567
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2022
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30951
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2164
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9422
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.719916288803627e-5
allele num: 11468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.718952e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.38e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.57e-1

FS
type: SiteQuality
SIO_000300: 1.097e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

QD
type: SiteQuality
SIO_000300: 1.108e1

MQ
type: SiteQuality
SIO_000300: 5.978e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.5e0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4257
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3639
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30951
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9466
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2164
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3567
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2022
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10290
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504890895410083e-5
allele num: 66450
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: -2.075e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.795e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.94e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.32e0

MQ
type: SiteQuality
SIO_000300: 5.536e1

DP
type: SiteQuality
SIO_000300: 2.719126e6

GenotypeQuality
all individuals: 136
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4237
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9363
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3557
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2164
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30950
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3566
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3637
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.72e-1

DP
type: SiteQuality
SIO_000300: 2.718842e6

VQSLOD
type: SiteQuality
SIO_000300: 1.1e-1

FS
type: SiteQuality
SIO_000300: 7.58e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.66e-1

MQ
type: SiteQuality
SIO_000300: 5.906e1

QD
type: SiteQuality
SIO_000300: 1.016e1

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3557
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2019
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30998
bin: 9.75e1
variant carriers: 130

GenotypeQuality
all individuals: 9378
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3547
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2154
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3633
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4235
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 116
allele frequency: 1.745200698080279e-3
allele num: 66468
num of homozygotes: 1

African
type: Population
allele count: 4
allele frequency: 3.894080996884735e-4
allele num: 10272
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.223750652968832e-4
allele num: 11486
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.821714840903571e-4
allele num: 16468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.515610791148833e-4
allele num: 6598
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

DP
type: SiteQuality
SIO_000300: 2.721789e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

VQSLOD
type: SiteQuality
SIO_000300: 6.35e0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.43e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.93e-1

QD
type: SiteQuality
SIO_000300: 1.344e1

GenotypeQuality
all individuals: 3640
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4243
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2024
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9381
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2159
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30922
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3553
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.735202492211838e-5
allele num: 10272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66472
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073120369245719e-5
allele num: 16466
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.8168e1

MQ
type: SiteQuality
SIO_000300: 5.977e1

VQSLOD
type: SiteQuality
SIO_000300: -2.633e0

MQRankSum
type: SiteQuality
SIO_000300: 4.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

DP
type: SiteQuality
SIO_000300: 2.718441e6

QD
type: SiteQuality
SIO_000300: 1.133e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.51e-1

GenotypeQuality
all individuals: 86
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2024
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3639
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4243
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9356
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 3550
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30921
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2155
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3567
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.738994935722633e-5
allele num: 10268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.017752369489996e-5
allele num: 66470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.05e-1

QD
type: SiteQuality
SIO_000300: 9.720000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.482e0

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

DP
type: SiteQuality
SIO_000300: 2.718489e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-1

GenotypeQuality
all individuals: 200
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30916
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3552
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3566
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4247
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 9394
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2154
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2024
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.894839337877313e-4
allele num: 10270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66480
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.718237e6

MQ
type: SiteQuality
SIO_000300: 5.984e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

QD
type: SiteQuality
SIO_000300: 1.402e1

MQRankSum
type: SiteQuality
SIO_000300: 4.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.03e0

GenotypeQuality
all individuals: 3567
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30916
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3548
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2149
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2024
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3642
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4240
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.008785654110001e-5
allele num: 66472
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
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VQSLOD
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ReadPosRankSum
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SIO_000300: 7.05e-1

ClippingRankSum
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SIO_000300: -1.63e-1

FS
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BaseQRankSum
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele num: 898
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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allele num: 16470
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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FS
type: SiteQuality
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MQRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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QD
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MQ
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 11
allele frequency: 1.655031295137217e-4
allele num: 66464
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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VQSLOD
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FS
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DP
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MQRankSum
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MQ
type: SiteQuality
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InbreedingCoeff
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 9.98e-1

ReadPosRankSum
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SIO_000300: 4.1e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.712319219376198e-5
allele num: 11478
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.49e-1

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -8.070000000000001e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505208019748329e-5
allele num: 66436
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10234
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
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SIO_000300: 1.56e0

QD
type: SiteQuality
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MQ
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SIO_000300: 6.0e1

MQRankSum
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SIO_000300: -1.68e-1

ReadPosRankSum
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InbreedingCoeff
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FS
type: SiteQuality
SIO_000300: 7.08e-1

VQSLOD
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SIO_000300: 1.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e-2

DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

African
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allele frequency: 1.074428599335808e-3
allele num: 10238
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East Asian
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Other
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66426
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South Asian
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InbreedingCoeff
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QD
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BaseQRankSum
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VQSLOD
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MQ
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FS
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MQRankSum
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DP
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 20

East Asian
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Other
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European (Finnish)
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South Asian
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Latino
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African
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allele num: 10234
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European (Non-Finnish)
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allele frequency: 2.709782314154096e-4
allele num: 66426
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ReadPosRankSum
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MQ
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QD
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VQSLOD
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FS
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ClippingRankSum
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DP
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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European (Non-Finnish)
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African
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South Asian
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East Asian
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Latino
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VQSLOD
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MQRankSum
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ReadPosRankSum
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MQ
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DP
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InbreedingCoeff
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QD
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BaseQRankSum
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ClippingRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.072382803011902e-5
allele num: 16468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.123e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.388e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.07e-1

MQ
type: SiteQuality
SIO_000300: 5.855e1

MQRankSum
type: SiteQuality
SIO_000300: 5.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.61e-1

DP
type: SiteQuality
SIO_000300: 2.193071e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.909999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.023914942321014e-5
allele num: 66402
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 1.546e0

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

BaseQRankSum
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SIO_000300: -3.827e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.195384e6

QD
type: SiteQuality
SIO_000300: 1.583e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

European (Non-Finnish)
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allele count: 8
allele frequency: 1.204130166470996e-4
allele num: 66438
num of homozygotes: 0

European (Finnish)
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allele count: 5
allele frequency: 7.598784194528875e-4
allele num: 6580
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.65e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.19e-1

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.206634e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 3.13e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16767865483419e-4
allele num: 8564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66440
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.037e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.11e-1

DP
type: SiteQuality
SIO_000300: 2.209882e6

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.196e0

MQRankSum
type: SiteQuality
SIO_000300: -3.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.096e1

FS
type: SiteQuality
SIO_000300: 2.076e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.681e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502223290469895e-5
allele num: 66568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.281e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 1.373e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.603e0

DP
type: SiteQuality
SIO_000300: 2.223318e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.516530178950561e-4
allele num: 6594
num of homozygotes: 0

South Asian
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.002552169343942e-5
allele num: 66610
num of homozygotes: 0

DP
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
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MQ
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BaseQRankSum
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InbreedingCoeff
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QD
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 7.500975126766479e-5
allele num: 66658
num of homozygotes: 0

South Asian
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East Asian
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allele frequency: 0.0e0
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Other
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allele num: 906
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
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FS
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ReadPosRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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DP
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
type: Population
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East Asian
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allele count: 0
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European (Finnish)
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European (Non-Finnish)
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Latino
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allele num: 11524
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InbreedingCoeff
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DP
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MQRankSum
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FS
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VQSLOD
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BaseQRankSum
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MQ
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ReadPosRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66662
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.324e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.151e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.227969e6

MQRankSum
type: SiteQuality
SIO_000300: -1.17e-1

FS
type: SiteQuality
SIO_000300: 3.2918e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -6.98e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499655079331754e-5
allele num: 66682
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-2

DP
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SIO_000300: 2.228929e6

BaseQRankSum
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SIO_000300: 3.98e0

MQRankSum
type: SiteQuality
SIO_000300: -6.8e-2

InbreedingCoeff
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SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.903e0

FS
type: SiteQuality
SIO_000300: 1.3343e1

QD
type: SiteQuality
SIO_000300: 6.19e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.671522719389525e-5
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66686
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.31e-2

QD
type: SiteQuality
SIO_000300: 1.441e1

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -7.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.238e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.97e0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 76
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variant carriers: 0

GenotypeQuality
all individuals: 16839
bin: 9.75e1
variant carriers: 23

East Asian
type: Population
allele count: 23
allele frequency: 2.666975881261596e-3
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.230512e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.4e-2

MQ
type: SiteQuality
SIO_000300: 5.985e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.765e0

FS
type: SiteQuality
SIO_000300: 5.2e-1

QD
type: SiteQuality
SIO_000300: 1.296e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.51e0

GenotypeQuality
all individuals: 7138
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 2675
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3337
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.186e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.628e1

DP
type: SiteQuality
SIO_000300: 2.22932e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.43e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.285e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e-1

MQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.98e1

FS
type: SiteQuality
SIO_000300: 2.459e0

DP
type: SiteQuality
SIO_000300: 2.229695e6

VQSLOD
type: SiteQuality
SIO_000300: 2.16e0

InbreedingCoeff
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SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.141e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
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South Asian
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allele count: 0
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BaseQRankSum
type: SiteQuality
SIO_000300: -7.358e0

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.942e1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
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DP
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ReadPosRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.665511265164645e-5
allele num: 11540
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211827435773146e-4
allele num: 16504
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
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SIO_000300: 2.58e0

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.06e-1

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.964e1

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 16828
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variant carriers: 1

GenotypeQuality
all individuals: 8
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

South Asian
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East Asian
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Latino
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ClippingRankSum
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MQRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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QD
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MQ
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BaseQRankSum
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

South Asian
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East Asian
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Other
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FS
type: SiteQuality
SIO_000300: 2.784e0

MQ
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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DP
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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East Asian
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South Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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ReadPosRankSum
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DP
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MQRankSum
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BaseQRankSum
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MQ
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FS
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InbreedingCoeff
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VQSLOD
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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East Asian
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South Asian
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European (Non-Finnish)
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Other
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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QD
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InbreedingCoeff
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MQ
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MQRankSum
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FS
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

Latino
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66700
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African
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Other
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East Asian
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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FS
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QD
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Latino
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Other
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European (Finnish)
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East Asian
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South Asian
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DP
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MQ
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InbreedingCoeff
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FS
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ReadPosRankSum
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VQSLOD
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QD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Finnish)
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Other
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European (Non-Finnish)
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African
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South Asian
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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MQ
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ReadPosRankSum
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DP
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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East Asian
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Latino
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African
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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DP
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MQRankSum
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FS
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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QD
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MQ
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BaseQRankSum
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SIO_000300: -1.387e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

VQSLOD
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QD
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BaseQRankSum
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FS
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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DP
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MQ
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ReadPosRankSum
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SIO_000300: 1.22e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.500315022051544e-5
allele num: 66662
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
SIO_000300: 7.97e-1

ReadPosRankSum
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MQRankSum
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BaseQRankSum
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FS
type: SiteQuality
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ClippingRankSum
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SIO_000300: -9.340000000000001e-1

MQ
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.21305e6

MQRankSum
type: SiteQuality
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VQSLOD
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ClippingRankSum
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QD
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FS
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: 5.7e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.164144353899884e-4
allele num: 8590
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.917e1

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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QD
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VQSLOD
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 3.004897983713453e-5
allele num: 66558
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Latino
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South Asian
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DP
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BaseQRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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FS
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QD
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VQSLOD
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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South Asian
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Other
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European (Finnish)
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African
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Latino
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East Asian
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FS
type: SiteQuality
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MQRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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DP
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BaseQRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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